CmoCh11G012540 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G012540
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRetrotransposon protein, putative, Ty3-gypsy subclass, expressed
LocationCmo_Chr11 : 7940554 .. 7942625 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCTGTCAACTCCGAGACCTTGCCTATTGTGGGAGTTTCCAAAGGAGTCCCCTTCAAAATAGGGGATTGGATAGGAGAGCTAGACCTTGTCGTGGTTCGCATGGACGACTTCGACGTGGTACTTGGGATGGAGTTCCTCCTAGAACACAAAGTCATCCCAATGCCACTGGCGAAATGCTTGGTGATCACCGATCGCAACCCCATAGTAATACCTGCAAACATCAAGCAACCAGGTAATCTTCGAATCATCTTGGCCATAAAACTGAAAAGGGGACTCGCATGAGAGGAACCTACATTCATGGCCATACCACTGATGGAAGAAGCGACCACCGAAGAAACTATCCCAGAGGAAATTAAGGAAGTACTAAATAGCTATGCCGACATAATGCCAGAGAGCCTACCCCAAACACTACCACCTCGTCGAGGCATTGACCATGAAATCGAACTCTTCCTCGGGGTTAAACCGCCAGCGAAGAATGCATACCGGATGGCTCCGCCCAAGCTAGCCGAATTGAGAAAACAACTGGATGAGTTGTTGAAGGCGGGGTTCATTCGCCCGGCAAAGGCACCTTACGTAGCCCCCGTACTGTTTCAGAAGAAGAAGGATGGGCCGTTGCATCTGTGCATAGACTATAGAGCCTTAAACAAGGTGACGGTACGCAACAAATATCCGCTGCCGATAATATCCGACTTGTTCGACCAACTTCACAGGGCCAAGTACTTCACGAAGTTGGACTTACGATCAGAGTATTACCAAGTACGTATTGCCGAAGGGGACGAACCCAAGACGACGTGTGTAACAAGATATGGGGCCTTCGAATTCCTAGTAATGCCCTTTGGCTTGACAAATGCCCTAGCTACTTTCTGCACGTTGATGAACCAAGTTTTCTATGAATACTTGGATCAGTTCGTCATAGTATACCTCAACAACATCGTTGTTTACAACACAACCCTAGAGGAACACAAAGTGCACTTGAAGCTGGTGTTTGACAAGCTACGCAAAACCAACTGTATGTGAAGAAAGAGAAATGTGCATTCGCACAAACATGCATCAACTTCCTTGGATATGTCGTCAAATGTGAACAAATTAGTATGGATAACGACAAGTTAAAAGCTATCCAAGAATGGAAAGTTCCTACTTCCGTATCCGAGGTGCGGTCCTTCTTAGGATTAGCCAACTACTATAGGCGGTTCGTCGAAGAGTTTTCACGACGAGCCGCCCCATTGACAGAGCTGTTGAAGAAAGACCACCCTTGGTCGTGGTCGAATGATTGTCAAATGGCCTTTGAAAATCTGAAAACAACCATGACGAGGGGTCCTATCCTCAAGTTGGTAGATGTTACAAAGCCATTTGAAATAGAAACAGATGCTTCCGACTTTGCTCTAGGTGGGGTCCTTATTCAGGAAGGCCGCCCCATCGCTTACGAAAGTCGAAAGCTCAACAATGCCGAACGGAGATACACTGTCTCCAAGAAAGAAATGCTGGCTGTAGTCCACTGCCTTCGAGTCTGGAGACAGTATCTCTTGGGATCACAGTTCGTAGTGAAGATGGGTAACAGCGCCATTTGCCACTTCTTTGATCAACCAAAATTAACGGCAAAACAAGCCCGGTGGCAGGAGTCGTTGGCCGAATTTGACTTCAAGTTCGAACACAAAGCAGGAAAGAGTAATCAAGCAGCCGACGCACTGAGTCGGAAGGGCGAACATGCGGCCCTGTGCATGTTAGCCCATATTCATTCAAGTAAGATCGATGGATCGATGCGCGACATCATCAAGGAACATTTACATAAAGACCCATCGGCCAAAGCCGTTGTCGAACTAGCTAAAGCTGGAAAAACACGACAGTTTTGGGTTGAGGGAGACCTCCTGATGACCAAAGAAAACAGATTGCATGTCCCAAGAACGAGGGAACTGAGAAAGAAGCTCATTCAAGAATGTCATGATACCTTATGGGCCGGACACCCGGGGTGGCAAAGAACATACGCCCTAATAAAGAAGGGGTACTTCTGGCCAAACATGCAAGACGACATCATGCAATACACCAAGACGTGCCTCATCTGTCAATAG

mRNA sequence

ATGAAAGCTGTCAACTCCGAGACCTTGCCTATTGTGGGAGTTTCCAAAGGAGTCCCCTTCAAAATAGGGGATTGGATAGGAGAGCTAGACCTTGTCGTGGTTCGCATGGACGACTTCGACGTGGTACTTGGGATGGAGTTCCTCCTAGAACACAAAGTCATCCCAATGCCACTGGCGAAATGCTTGGTGATCACCGATCGCAACCCCATAGTAATACCTGCAAACATCAAGCAACCAGCGACCACCGAAGAAACTATCCCAGAGGAAATTAAGGAAGTACTAAATAGCTATGCCGACATAATGCCAGAGAGCCTACCCCAAACACTACCACCTCGTCGAGGCATTGACCATGAAATCGAACTCTTCCTCGGGGTTAAACCGCCAGCGAAGAATGCATACCGGATGGCTCCGCCCAAGCTAGCCGAATTGAGAAAACAACTGGATGAGTTGTTGAAGGCGGGGTTCATTCGCCCGGCAAAGGCACCTTACGTAGCCCCCGTACTGTTTCAGAAGAAGAAGGATGGGCCGTTGCATCTGTGCATAGACTATAGAGCCTTAAACAAGGTGACGGTACGCAACAAATATCCGCTGCCGATAATATCCGACTTGTTCGACCAACTTCACAGGGCCAAGTACTTCACGAAGTTGGACTTACGATCAGAGTATTACCAAGTACGTATTGCCGAAGGGGACGAACCCAAGACGACGTGTGTAACAAGATATGGGGCCTTCGAATTCCTAGTAATGCCCTTTGGCTTGACAAATGCCCTAGCTACTTTCTGCACGTTGATGAACCAAGTTTTCTATGAATACTTGGATCAGTTCGTCATAGTATACCTCAACAACATCGTTGTTTACAACACAACCCTAGAGGAACACAAAGTGCACTTGAAGCTGGTGTTTGACAAGCTACGCAAAACCAACTAATGGAAAGTTCCTACTTCCGTATCCGAGGTGCGGTCCTTCTTAGGATTAGCCAACTACTATAGGCGGTTCGTCGAAGAGTTTTCACGACGAGCCGCCCCATTGACAGAGCTGTTGAAGAAAGACCACCCTTGGTCGTGGTCGAATGATTGTCAAATGGCCTTTGAAAATCTGAAAACAACCATGACGAGGGGTCCTATCCTCAAGTTGGTAGATGTTACAAAGCCATTTGAAATAGAAACAGATGCTTCCGACTTTGCTCTAGGTGGGGTCCTTATTCAGGAAGGCCGCCCCATCGCTTACGAAAGTCGAAAGCTCAACAATGCCGAACGGAGATACACTGTCTCCAAGAAAGAAATGCTGGCTGTAGTCCACTGCCTTCGAGTCTGGAGACAGTATCTCTTGGGATCACAGTTCGTAGTGAAGATGGGTAACAGCGCCATTTGCCACTTCTTTGATCAACCAAAATTAACGGCAAAACAAGCCCGGTGGCAGGAGTCGTTGGCCGAATTTGACTTCAAGTTCGAACACAAAGCAGGAAAGAGTAATCAAGCAGCCGACGCACTGAGTCGGAAGGGCGAACATGCGGCCCTGTGCATGTTAGCCCATATTCATTCAAGTAAGATCGATGGATCGATGCGCGACATCATCAAGGAACATTTACATAAAGACCCATCGGCCAAAGCCGTTGTCGAACTAGCTAAAGCTGGAAAAACACGACAGTTTTGGGTTGAGGGAGACCTCCTGATGACCAAAGAAAACAGATTGCATGTCCCAAGAACGAGGGAACTGAGAAAGAAGCTCATTCAAGAATGTCATGATACCTTATGGGCCGGACACCCGGGGTGGCAAAGAACATACGCCCTAATAAAGAAGGGGTACTTCTGGCCAAACATGCAAGACGACATCATGCAATACACCAAGACGTGCCTCATCTGTCAATAG

Coding sequence (CDS)

ATGAAAGCTGTCAACTCCGAGACCTTGCCTATTGTGGGAGTTTCCAAAGGAGTCCCCTTCAAAATAGGGGATTGGATAGGAGAGCTAGACCTTGTCGTGGTTCGCATGGACGACTTCGACGTGGTACTTGGGATGGAGTTCCTCCTAGAACACAAAGTCATCCCAATGCCACTGGCGAAATGCTTGGTGATCACCGATCGCAACCCCATAGTAATACCTGCAAACATCAAGCAACCAGCGACCACCGAAGAAACTATCCCAGAGGAAATTAAGGAAGTACTAAATAGCTATGCCGACATAATGCCAGAGAGCCTACCCCAAACACTACCACCTCGTCGAGGCATTGACCATGAAATCGAACTCTTCCTCGGGGTTAAACCGCCAGCGAAGAATGCATACCGGATGGCTCCGCCCAAGCTAGCCGAATTGAGAAAACAACTGGATGAGTTGTTGAAGGCGGGGTTCATTCGCCCGGCAAAGGCACCTTACGTAGCCCCCGTACTGTTTCAGAAGAAGAAGGATGGGCCGTTGCATCTGTGCATAGACTATAGAGCCTTAAACAAGGTGACGGTACGCAACAAATATCCGCTGCCGATAATATCCGACTTGTTCGACCAACTTCACAGGGCCAAGTACTTCACGAAGTTGGACTTACGATCAGAGTATTACCAAGTACGTATTGCCGAAGGGGACGAACCCAAGACGACGTGTGTAACAAGATATGGGGCCTTCGAATTCCTAGTAATGCCCTTTGGCTTGACAAATGCCCTAGCTACTTTCTGCACGTTGATGAACCAAGTTTTCTATGAATACTTGGATCAGTTCGTCATAGTATACCTCAACAACATCGTTGTTTACAACACAACCCTAGAGGAACACAAAGTGCACTTGAAGCTGGTGTTTGACAAGCTACGCAAAACCAACTAA
Homology
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BLAST of CmoCh11G012540 vs. Swiss-Prot
Match: RRPO_OENBE (RNA-directed DNA polymerase homolog OS=Oenothera berteroana PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.5e-46
Identity = 89/127 (70.08%), Postives = 108/127 (85.04%), Query Frame = 1 

Query: 177 LHLCIDYRALNKVTVRNKYPLPIISDLFDQLHRAKYFTKLDLRSEYYQVRIAEGDEPKTT 236
           L +CIDYRAL KVT++NKYP+P + DLFD+L +A +FTKLDLRS Y+QVRIA+GDEPKTT
Sbjct: 6   LRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKTT 65

Query: 237 CVTRYGAFEFLVMPFGLTNALATFCTLMNQVFYEYLDQFVIVYLNNIVV---YNTTLEEH 296
           CVTRYG+FEF VMPFGLTNALATFC LMN V YEYLD FV+VYL+++VV   Y+ +L EH
Sbjct: 66  CVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYTIYSNSLHEH 125

Query: 297 KVHLKLV 301
             HL++V
Sbjct: 126 IKHLRVV 132

[Close]
BLAST of CmoCh11G012540 vs. Swiss-Prot
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35
Identity = 80/222 (36.04%), Postives = 132/222 (59.46%), Query Frame = 1 

Query: 89  EIKEVLNSYADIMPESLPQTLP-PRRGIDHEIELFL-GVKPPAKNAYRMAPPKLAELRKQ 148
           E+ ++   + DI  E+  + LP P +G++ E+EL     + P +N Y + P K+  +  +
Sbjct: 373 ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDE 432

Query: 149 LDELLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQ 208
           +++ LK+G IR +KA    PV+F  KK+G L + +DY+ LNK    N YPLP+I  L  +
Sbjct: 433 INQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAK 492

Query: 209 LHRAKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQ 268
           +  +  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ A A F   +N 
Sbjct: 493 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINT 552

Query: 269 VFYEYLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLRKTN 309
           +  E  +  V+ Y++NI++++ +  EH  H+K V  KL+  N
Sbjct: 553 ILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNAN 593

[Close]
BLAST of CmoCh11G012540 vs. Swiss-Prot
Match: TF28_SCHPO (Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-8 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35
Identity = 80/222 (36.04%), Postives = 132/222 (59.46%), Query Frame = 1 

Query: 89  EIKEVLNSYADIMPESLPQTLP-PRRGIDHEIELFL-GVKPPAKNAYRMAPPKLAELRKQ 148
           E+ ++   + DI  E+  + LP P +G++ E+EL     + P +N Y + P K+  +  +
Sbjct: 373 ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDE 432

Query: 149 LDELLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQ 208
           +++ LK+G IR +KA    PV+F  KK+G L + +DY+ LNK    N YPLP+I  L  +
Sbjct: 433 INQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAK 492

Query: 209 LHRAKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQ 268
           +  +  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ A A F   +N 
Sbjct: 493 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINT 552

Query: 269 VFYEYLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLRKTN 309
           +  E  +  V+ Y++NI++++ +  EH  H+K V  KL+  N
Sbjct: 553 ILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNAN 593

[Close]
BLAST of CmoCh11G012540 vs. Swiss-Prot
Match: TF27_SCHPO (Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-7 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35
Identity = 80/222 (36.04%), Postives = 132/222 (59.46%), Query Frame = 1 

Query: 89  EIKEVLNSYADIMPESLPQTLP-PRRGIDHEIELFL-GVKPPAKNAYRMAPPKLAELRKQ 148
           E+ ++   + DI  E+  + LP P +G++ E+EL     + P +N Y + P K+  +  +
Sbjct: 373 ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDE 432

Query: 149 LDELLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQ 208
           +++ LK+G IR +KA    PV+F  KK+G L + +DY+ LNK    N YPLP+I  L  +
Sbjct: 433 INQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAK 492

Query: 209 LHRAKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQ 268
           +  +  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ A A F   +N 
Sbjct: 493 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINT 552

Query: 269 VFYEYLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLRKTN 309
           +  E  +  V+ Y++NI++++ +  EH  H+K V  KL+  N
Sbjct: 553 ILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNAN 593

[Close]
BLAST of CmoCh11G012540 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 4.8e-35
Identity = 82/212 (38.68%), Postives = 121/212 (57.08%), Query Frame = 1 

Query: 103 ESLPQTLPPRRG------IDHEIELFLGVKPPAKNAYRMAPPKLAELRKQLDELLKAGFI 162
           E +   LPPR        + H+IE+  G + P    Y +      E+ K + +LL   FI
Sbjct: 592 EIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFI 651

Query: 163 RPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHRAKYFTKL 222
            P+K+P  +PV+   KKDG   LC+DYR LNK T+ + +PLP I +L  ++  A+ FT L
Sbjct: 652 VPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTL 711

Query: 223 DLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVFYEYLDQFV 282
           DL S Y+Q+ +   D  KT  VT  G +E+ VMPFGL NA +TF   M   F +   +FV
Sbjct: 712 DLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFV 771

Query: 283 IVYLNNIVVYNTTLEEHKVHLKLVFDKLRKTN 309
            VYL++I++++ + EEH  HL  V ++L+  N
Sbjct: 772 NVYLDDILIFSESPEEHWKHLDTVLERLKNEN 801

[Close]
BLAST of CmoCh11G012540 vs. TrEMBL
Match: A5AZ16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016761 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 7.8e-101
Identity = 192/338 (56.80%), Postives = 239/338 (70.71%), Query Frame = 1 

Query: 1   MKAVNSETLPIVGVSKGVPFKIGDWIGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAK 60
           +KAVNS   P  GV++GV   IG W G +D  V  MD F +VLG++FL + K +P+P  +
Sbjct: 436 LKAVNSAAKPSHGVARGVTMHIGSWEGRVDFTVAPMDHFKMVLGIDFLQKVKAVPLPFLR 495

Query: 61  CLVITDRN-----PIVIPANIKQPATTE---------------------------ETIPE 120
            + I +       P V    +K P  +                            E +P+
Sbjct: 496 SMAILEEEKSCMVPTVTEGTLKTPMLSTMQVKKGLKREEVTYLATLKEERDDGSGEPMPK 555

Query: 121 EIKEVLNSYADIMPESLPQTLPPRRGIDHEIELFLGVKPPAKNAYRMAPPKLAELRKQLD 180
           EI+ VL+ + D+MP  LP+ LPPRR  DH+IEL  G KPPA   YRMAPP+L ELR+QL 
Sbjct: 556 EIEGVLDEFKDVMPPELPKRLPPRREEDHKIELEPGSKPPAMGPYRMAPPELEELRRQLK 615

Query: 181 ELLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQLH 240
           ELL AGFI+P+KAPY APVLFQKK DG L +CIDYRALNKVTV+NKYP+P+I+DLFDQL 
Sbjct: 616 ELLDAGFIQPSKAPYGAPVLFQKKHDGSLRMCIDYRALNKVTVKNKYPIPLIADLFDQLG 675

Query: 241 RAKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVF 300
           RAKYFTKLDLRS YYQVRIAEGDEPKTTCVTRYG++EFLVMPFGLTNA ATFCTLMN++F
Sbjct: 676 RAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGSYEFLVMPFGLTNAPATFCTLMNKIF 735

Query: 301 YEYLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLRK 307
           + YLD+FV+VYL++IV+Y+ TL+EH+ HL+ VF  LR+
Sbjct: 736 HPYLDKFVVVYLDDIVIYSNTLKEHEEHLRKVFKILRQ 773

[Close]
BLAST of CmoCh11G012540 vs. TrEMBL
Match: A5BDH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001313 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.6e-98
Identity = 188/338 (55.62%), Postives = 234/338 (69.23%), Query Frame = 1 

Query: 1   MKAVNSETLPIVGVSKGVPFKIGDWIGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAK 60
           +KAVNS   P  GV++GV   IG W G +D  V  MDDF +VLGM+FL + K +P+P  +
Sbjct: 479 LKAVNSAAKPSHGVARGVSMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVKAVPLPFLR 538

Query: 61  CLVITDRN-----PIVIPANIKQPATT---------------------------EETIPE 120
            + I +       P V    +K P  +                            E +P+
Sbjct: 539 SMAILEEEKPCMVPTVTEGTLKTPMLSAMQVKKGLKREEVTYLATLKEERDDGLREPMPK 598

Query: 121 EIKEVLNSYADIMPESLPQTLPPRRGIDHEIELFLGVKPPAKNAYRMAPPKLAELRKQLD 180
           EI+ VL+ + D+MP  LP+ LPPRR  DH+IEL  G KPPA   YRMAPP+L ELR+QL 
Sbjct: 599 EIEGVLDEFKDVMPPELPKRLPPRREEDHKIELEPGAKPPAMGPYRMAPPELEELRRQLK 658

Query: 181 ELLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQLH 240
           ELL  GFI+P+KAPY APVLFQKK DG L +CIDYRALNKVTV+NKYP+P+I+DLFDQL 
Sbjct: 659 ELLDVGFIQPSKAPYGAPVLFQKKHDGSLRMCIDYRALNKVTVKNKYPIPLIADLFDQLG 718

Query: 241 RAKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVF 300
           RA YFTKLDLR  YYQVRI EGDE KTTCVTRYG++EFLVMPFGLTNA ATFCTL+N++F
Sbjct: 719 RASYFTKLDLRLGYYQVRIVEGDESKTTCVTRYGSYEFLVMPFGLTNAPATFCTLVNKIF 778

Query: 301 YEYLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLRK 307
           + YLD+FV+VYL++IV+Y+ TL+EH  HL+ VF  LR+
Sbjct: 779 HPYLDKFVVVYLDDIVIYSNTLKEHVKHLRKVFKILRQ 816

[Close]
BLAST of CmoCh11G012540 vs. TrEMBL
Match: A5BX03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032357 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.6e-98
Identity = 188/338 (55.62%), Postives = 238/338 (70.41%), Query Frame = 1 

Query: 1   MKAVNSETLPIVGVSKGVPFKIGDWIGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAK 60
           +KAVNS   P  GV++GV   IG W G +D  V  MDDF +VLGM+FL + K +P+P  +
Sbjct: 474 LKAVNSAAKPSHGVARGVTMHIGLWEGRVDFTVAPMDDFKMVLGMDFLQKVKAVPLPFLR 533

Query: 61  CLVI---------------TDRNPIVIPANIKQPATTEET-----------------IPE 120
            + I               T + P++    +K+    EE                  +P+
Sbjct: 534 SMAILEEEKPCMVPTVTEGTPKTPMLSAMQVKKGLKREEVTYLATLKEEKDDGSGEPMPK 593

Query: 121 EIKEVLNSYADIMPESLPQTLPPRRGIDHEIELFLGVKPPAKNAYRMAPPKLAELRKQLD 180
           EIK VL+ + D+M   LP+ L PRR  +H+I+L  G KP A   YRMAPP+L ELR+QL 
Sbjct: 594 EIKGVLDEFKDVMXPELPKRLXPRREEBHKIKLEXGAKPRAMGPYRMAPPELEELRRQLK 653

Query: 181 ELLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQLH 240
           ELL AGFI+P+KAPY APVLFQKK DG L +CIDYRALNKVTV+NKYP+P+I+DLFDQL 
Sbjct: 654 ELLDAGFIQPSKAPYGAPVLFQKKHDGSLRMCIDYRALNKVTVKNKYPIPLIADLFDQLG 713

Query: 241 RAKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVF 300
           RA+YFTKLDLRS YYQVRIAEGDEPKTTCVTRYG++EFLVMPFGLTNA ATFCTLMN++F
Sbjct: 714 RARYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGSYEFLVMPFGLTNAPATFCTLMNKIF 773

Query: 301 YEYLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLRK 307
           + YLD+FV+ YL++IV+Y+ TL+EH+ HL+ VF  LR+
Sbjct: 774 HPYLDKFVVXYLDDIVIYSNTLKEHEEHLRKVFKILRQ 811

[Close]
BLAST of CmoCh11G012540 vs. TrEMBL
Match: A0A087PJF6_9PROT (Uncharacterized protein OS=Acetobacter malorum GN=AmDm5_3101 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 4.0e-97
Identity = 179/339 (52.80%), Postives = 241/339 (71.09%), Query Frame = 1 

Query: 1   MKAVNSETLPIVGVSKGVPFKIGDWIGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAK 60
           +K VNS   PIVGV++ V   IG W G++D  +V+MDD+ VV+G+EF+ + +  P+P   
Sbjct: 303 VKTVNSAATPIVGVARNVQVDIGTWKGKIDFTIVKMDDYGVVIGLEFMDKVRAFPIPFYN 362

Query: 61  --CLVITDRNPIVIPANIKQPATTEET-------------------------------IP 120
             C++   R P ++P   +    T+                                 + 
Sbjct: 363 IFCILADGRQPCLVPLERQAKKCTQHLSAIQFAKSWKKGEATFLATLILNEGEEKHGPLQ 422

Query: 121 EEIKEVLNSYADIMPESLPQTLPPRRGIDHEIELFLGVKPPAKNAYRMAPPKLAELRKQL 180
           +++++VL  +AD+MP+ LP+ LPPR+ +DH IEL  G KPP+K+ YRM+PP+L ELRKQL
Sbjct: 423 KQVEDVLVEFADLMPKELPKKLPPRKEVDHAIELEPGAKPPSKSPYRMSPPELEELRKQL 482

Query: 181 DELLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQL 240
           +ELL AG+I+P+K+PY APVLFQ+KK+G L LCIDYRALNK+T++NKYPLP+I+DLFDQL
Sbjct: 483 NELLDAGYIQPSKSPYGAPVLFQRKKEGSLRLCIDYRALNKITIKNKYPLPLIADLFDQL 542

Query: 241 HRAKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQV 300
             A+YFTKLDLRS YYQVRIA GDE KT  VTRYGAFE+ VMPFG+TNA ATFCTLMN+V
Sbjct: 543 GEARYFTKLDLRSGYYQVRIAPGDESKTAMVTRYGAFEYKVMPFGMTNAPATFCTLMNKV 602

Query: 301 FYEYLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLRK 307
           F+ YLD+FV+VY+++IVVY+ TLEEH  HL++VF  LR+
Sbjct: 603 FHPYLDKFVVVYIDDIVVYSKTLEEHVKHLRIVFKTLRE 641

[Close]
BLAST of CmoCh11G012540 vs. TrEMBL
Match: A5B4X8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020318 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 4.0e-97
Identity = 187/325 (57.54%), Postives = 231/325 (71.08%), Query Frame = 1 

Query: 1   MKAVNSETLPIVGVSKGVPFKIGDWIGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAK 60
           +KAVNS   P  GV++ V   IG W G +D  V  MDDF +VLGM+FL +   +P+P  +
Sbjct: 395 LKAVNSAAKPSHGVAREVTMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVXAVPLPFLR 454

Query: 61  CLVI---------------TDRNPIVIPANIKQPATTEE-----TIPEE----------- 120
            + I               T + P++    +K+    EE     T+ EE           
Sbjct: 455 SMAILEEEKPCMVPTVTEGTPKTPMLSAMQVKKGLKREEVTYLATLKEEKDDGSGEPMLK 514

Query: 121 -IKEVLNSYADIMPESLPQTLPPRRGIDHEIELFLGVKPPAKNAYRMAPPKLAELRKQLD 180
            IK VL+ + D+MP  LP+ LPPRR  DH+IEL LG KPPA   YRMAPP+L ELR+QL 
Sbjct: 515 EIKRVLDEFKDVMPPELPKRLPPRREEDHKIELELGAKPPAMGPYRMAPPELEELRRQLK 574

Query: 181 ELLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQLH 240
           ELL AGFI+P+KAPY APVLFQKK DG L +CIDYRALNKVTV+NKYP+P+I+DLFDQL 
Sbjct: 575 ELLDAGFIQPSKAPYGAPVLFQKKHDGSLQMCIDYRALNKVTVKNKYPIPLIADLFDQLG 634

Query: 241 RAKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVF 294
           RA+YFTKLDLRS YYQVRIAEGDEPKTTCVTRYG++EFLVM FGLTNA ATFCTLMN++F
Sbjct: 635 RARYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGSYEFLVMSFGLTNAPATFCTLMNKIF 694

[Close]
BLAST of CmoCh11G012540 vs. NCBI nr
Match: gi|659114583|ref|XP_008457127.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496873 [Cucumis melo])

HSP 1 Score: 412.5 bits (1059), Expect = 6.3e-112
Identity = 211/301 (70.10%), Postives = 238/301 (79.07%), Query Frame = 1 

Query: 36  MDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPIVIPANIKQP---------------- 95
           MDDFDVVLGMEFLLEH+VI MPLAKCLVIT   P V+  +++QP                
Sbjct: 1   MDDFDVVLGMEFLLEHQVILMPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLS 60

Query: 96  --------------ATTEETIPEEIKEVLNSYADIMPESLPQTLPPRRGIDHEIELFLGV 155
                           + ET+P EI  VL  Y D+MP+S P++LPPRR IDHEIEL  G 
Sbjct: 61  RDEPTFMAIPLNSSENSGETVPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGT 120

Query: 156 KPPAKNAYRMAPPKLAELRKQLDELLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRA 215
           KP AKNAYRMAPP+LAELRKQLDELL AGFIRPAKAPY APVLFQKKKDG L LCIDYRA
Sbjct: 121 KPRAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRA 180

Query: 216 LNKVTVRNKYPLPIISDLFDQLHRAKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFE 275
           LNK+TVRNKYPLPII+DLFD+LH AKYF+KLDLRS YYQVRIAEGDEPKTTCVTRYGAFE
Sbjct: 181 LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFE 240

Query: 276 FLVMPFGLTNALATFCTLMNQVFYEYLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLR 307
           FLVMPFGLTNA ATFCTLMNQVF+EYLD+FV+VYL++IVVY+ T+EEH+ HL+ VF KL+
Sbjct: 241 FLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLK 300

[Close]
BLAST of CmoCh11G012540 vs. NCBI nr
Match: gi|1009173931|ref|XP_015868079.1| (PREDICTED: uncharacterized protein LOC107405525 [Ziziphus jujuba])

HSP 1 Score: 378.6 bits (971), Expect = 1.0e-101
Identity = 196/336 (58.33%), Postives = 246/336 (73.21%), Query Frame = 1 

Query: 1   MKAVNSETLPIVGVSKGVPFKIGDWIGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAK 60
           MKAVNS   PI GV++GV   IG+W+G+L+L VV MDDF VVLGMEFL + K  P+P A 
Sbjct: 272 MKAVNSAAKPIHGVARGVQATIGEWVGQLNLSVVPMDDFKVVLGMEFLDQVKAFPLPFAN 331

Query: 61  ----------CLVITDR---------NPIVIPANIKQP-----ATTEET-------IPEE 120
                     C+V T+R         + +     IK+      A  +E        I  E
Sbjct: 332 SMCIMDGGMTCMVPTERASKMEAKALSAMQFKKGIKKKEQSYLAVVQELDGHEDVLISPE 391

Query: 121 IKEVLNSYADIMPESLPQTLPPRRGIDHEIELFLGVKPPAKNAYRMAPPKLAELRKQLDE 180
           ++ VL  + D+MP+ LP+ LPPRR +DH+IEL  G KPPA   YRMAPP+L ELR+QL +
Sbjct: 392 VQTVLEEFKDVMPKELPKKLPPRREVDHKIELESGSKPPAMGPYRMAPPELEELRRQLKD 451

Query: 181 LLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHR 240
           L+ AG+IRP+KAPY APVLFQKKKDG L +CIDYRALNK+T++NKYP+P+I+DLFDQL +
Sbjct: 452 LVDAGYIRPSKAPYGAPVLFQKKKDGSLRMCIDYRALNKITIKNKYPIPLIADLFDQLGQ 511

Query: 241 AKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVFY 300
           AKYFTKLDLRS YYQVRIAEGDE KTTC+TRYG++EFLVMPFGLTNA ATFCTLMN++F+
Sbjct: 512 AKYFTKLDLRSGYYQVRIAEGDEAKTTCITRYGSYEFLVMPFGLTNAPATFCTLMNKLFH 571

Query: 301 EYLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLR 306
            YLD+FV+VYL++IVVY+ T+EEH  HL+ VF  L+
Sbjct: 572 PYLDRFVVVYLDDIVVYSNTMEEHLQHLRQVFQVLQ 607

[Close]
BLAST of CmoCh11G012540 vs. NCBI nr
Match: gi|1009173738|ref|XP_015867972.1| (PREDICTED: uncharacterized protein LOC107405433 [Ziziphus jujuba])

HSP 1 Score: 376.3 bits (965), Expect = 5.0e-101
Identity = 193/336 (57.44%), Postives = 245/336 (72.92%), Query Frame = 1 

Query: 1   MKAVNSETLPIVGVSKGVPFKIGDWIGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAK 60
           MKAVNS   PI GV++GV   IG+W+G+L+L VV MDDF VVLGMEFL + K  P+P A 
Sbjct: 293 MKAVNSVAKPIHGVARGVQATIGEWVGQLNLSVVPMDDFKVVLGMEFLDQVKAFPLPFAN 352

Query: 61  ----------CLVITDR---------NPIVIPANIKQPATTEETIPEE------------ 120
                     C+V T+R         + +     IK+   +   + +E            
Sbjct: 353 SMFIMDGGMTCMVPTERASKMEAKALSAMQFKKGIKKKEQSYLAVVQELDGHEDVLTSPE 412

Query: 121 IKEVLNSYADIMPESLPQTLPPRRGIDHEIELFLGVKPPAKNAYRMAPPKLAELRKQLDE 180
           ++ VL  + D+MP+ LP+ LPPRR +DH+IEL  G KPPA   YRMAPP+L ELR+QL +
Sbjct: 413 VQTVLEEFKDVMPKELPKKLPPRREVDHKIELEPGSKPPAMGPYRMAPPELEELRRQLKD 472

Query: 181 LLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHR 240
           L+ AG+IRP+KAPY APVLFQKKKDG L +CIDYRALNK+T++NKYP+P+I+DLFDQL +
Sbjct: 473 LVDAGYIRPSKAPYGAPVLFQKKKDGSLRMCIDYRALNKITIKNKYPIPLIADLFDQLGQ 532

Query: 241 AKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVFY 300
           AKYFTKLDLRS YYQVRIAEGDE KTTC+TRYG++EFLVMPFGLTNA ATFCTLMN++F+
Sbjct: 533 AKYFTKLDLRSGYYQVRIAEGDEAKTTCITRYGSYEFLVMPFGLTNAPATFCTLMNKLFH 592

Query: 301 EYLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLR 306
            YLD+FV+VYL++IVVY+ T+EEH  HL+ VF  L+
Sbjct: 593 PYLDRFVVVYLDDIVVYSNTMEEHLQHLRQVFQVLQ 628

[Close]
BLAST of CmoCh11G012540 vs. NCBI nr
Match: gi|147845507|emb|CAN80599.1| (hypothetical protein VITISV_016761 [Vitis vinifera])

HSP 1 Score: 375.2 bits (962), Expect = 1.1e-100
Identity = 192/338 (56.80%), Postives = 239/338 (70.71%), Query Frame = 1 

Query: 1   MKAVNSETLPIVGVSKGVPFKIGDWIGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAK 60
           +KAVNS   P  GV++GV   IG W G +D  V  MD F +VLG++FL + K +P+P  +
Sbjct: 436 LKAVNSAAKPSHGVARGVTMHIGSWEGRVDFTVAPMDHFKMVLGIDFLQKVKAVPLPFLR 495

Query: 61  CLVITDRN-----PIVIPANIKQPATTE---------------------------ETIPE 120
            + I +       P V    +K P  +                            E +P+
Sbjct: 496 SMAILEEEKSCMVPTVTEGTLKTPMLSTMQVKKGLKREEVTYLATLKEERDDGSGEPMPK 555

Query: 121 EIKEVLNSYADIMPESLPQTLPPRRGIDHEIELFLGVKPPAKNAYRMAPPKLAELRKQLD 180
           EI+ VL+ + D+MP  LP+ LPPRR  DH+IEL  G KPPA   YRMAPP+L ELR+QL 
Sbjct: 556 EIEGVLDEFKDVMPPELPKRLPPRREEDHKIELEPGSKPPAMGPYRMAPPELEELRRQLK 615

Query: 181 ELLKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQLH 240
           ELL AGFI+P+KAPY APVLFQKK DG L +CIDYRALNKVTV+NKYP+P+I+DLFDQL 
Sbjct: 616 ELLDAGFIQPSKAPYGAPVLFQKKHDGSLRMCIDYRALNKVTVKNKYPIPLIADLFDQLG 675

Query: 241 RAKYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVF 300
           RAKYFTKLDLRS YYQVRIAEGDEPKTTCVTRYG++EFLVMPFGLTNA ATFCTLMN++F
Sbjct: 676 RAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGSYEFLVMPFGLTNAPATFCTLMNKIF 735

Query: 301 YEYLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLRK 307
           + YLD+FV+VYL++IV+Y+ TL+EH+ HL+ VF  LR+
Sbjct: 736 HPYLDKFVVVYLDDIVIYSNTLKEHEEHLRKVFKILRQ 773

[Close]
BLAST of CmoCh11G012540 vs. NCBI nr
Match: gi|1009176455|ref|XP_015869440.1| (PREDICTED: uncharacterized protein LOC107406761 [Ziziphus jujuba])

HSP 1 Score: 374.0 bits (959), Expect = 2.5e-100
Identity = 188/335 (56.12%), Postives = 242/335 (72.24%), Query Frame = 1 

Query: 1   MKAVNSETLPIVGVSKGVPFKIGDWIGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAK 60
           +K VN+E  P+ G+++ V   +G W G ++  +  +DDFD+VLGMEFL +  V+P+P   
Sbjct: 298 LKTVNAEAKPLDGMARNVELHLGTWQGNVNFSIAPLDDFDIVLGMEFLRQFNVVPLPRYN 357

Query: 61  CLVITDRNPIVIPANIKQPATT-------------------------EETI-----PEEI 120
            + I +  P +IP  I +P+T+                         EE +     P+E+
Sbjct: 358 TVCIMEGGPCMIPT-IHKPSTSNRLSAMQLKKGVKKGEPTFLATLREEEEVTSKEPPKEV 417

Query: 121 KEVLNSYADIMPESLPQTLPPRRGIDHEIELFLGVKPPAKNAYRMAPPKLAELRKQLDEL 180
            +VL  + D+MP  LP+ LPPRR +DH IEL  G KPPAK  YRM+P +L ELR+QL EL
Sbjct: 418 SQVLEEFKDVMPPQLPKKLPPRREVDHCIELEPGAKPPAKAPYRMSPSELEELRRQLKEL 477

Query: 181 LKAGFIRPAKAPYVAPVLFQKKKDGPLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHRA 240
           L AG+I+P+KAPY APVLFQKK DG L LCIDYRALNKVT++NKYP+P+I+DLFDQL  A
Sbjct: 478 LDAGYIQPSKAPYGAPVLFQKKHDGSLRLCIDYRALNKVTIKNKYPIPLIADLFDQLGGA 537

Query: 241 KYFTKLDLRSEYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVFYE 300
           +YFTKLDLRS YYQVRIAEGDEPKTTCVTRYGA+EFLVMPFGLTNA ATFCTLMN++F+ 
Sbjct: 538 RYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAYEFLVMPFGLTNAPATFCTLMNKIFHP 597

Query: 301 YLDQFVIVYLNNIVVYNTTLEEHKVHLKLVFDKLR 306
           YLD+FV+VYL++IV+Y+ TLEEH  HL++VF  L+
Sbjct: 598 YLDKFVVVYLDDIVIYSKTLEEHIHHLRIVFKVLK 631

The following BLAST results are available for this feature:
BLAST of CmoCh11G012540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RRPO_OENBE3.5e-4670.08RNA-directed DNA polymerase homolog OS=Oenothera berteroana PE=4 SV=1[more]
TF211_SCHPO2.2e-3536.04Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
TF28_SCHPO2.2e-3536.04Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF27_SCHPO2.2e-3536.04Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
YI31B_YEAST4.8e-3538.68Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
BLAST of CmoCh11G012540 vs. TrEMBL
Match NameE-valueIdentityDescription
A5AZ16_VITVI7.8e-10156.80Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016761 PE=4 SV=1[more]
A5BDH9_VITVI1.6e-9855.62Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001313 PE=4 SV=1[more]
A5BX03_VITVI3.6e-9855.62Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032357 PE=4 SV=1[more]
A0A087PJF6_9PROT4.0e-9752.80Uncharacterized protein OS=Acetobacter malorum GN=AmDm5_3101 PE=4 SV=1[more]
A5B4X8_VITVI4.0e-9757.54Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020318 PE=4 SV=1[more]
BLAST of CmoCh11G012540 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh11G012540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114583|ref|XP_008457127.1|6.3e-11270.10PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496873 [Cucumis me... [more]
gi|1009173931|ref|XP_015868079.1|1.0e-10158.33PREDICTED: uncharacterized protein LOC107405525 [Ziziphus jujuba][more]
gi|1009173738|ref|XP_015867972.1|5.0e-10157.44PREDICTED: uncharacterized protein LOC107405433 [Ziziphus jujuba][more]
gi|147845507|emb|CAN80599.1|1.1e-10056.80hypothetical protein VITISV_016761 [Vitis vinifera][more]
gi|1009176455|ref|XP_015869440.1|2.5e-10056.12PREDICTED: uncharacterized protein LOC107406761 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G012540.1CmoCh11G012540.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 172..307
score: 1.8
NoneNo IPR availableGENE3DG3DSA:3.10.10.10coord: 120..264
score: 2.2
NoneNo IPR availablePANTHERPTHR10178GAG/POL/ENV POLYPROTEINcoord: 38..305
score: 7.3
NoneNo IPR availablePANTHERPTHR10178:SF283SUBFAMILY NOT NAMEDcoord: 38..305
score: 7.3
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 93..307
score: 6.45

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G012540Cucumber (Gy14) v1cgycmoB0050
CmoCh11G012540Cucumber (Gy14) v1cgycmoB0051
CmoCh11G012540Cucurbita maxima (Rimu)cmacmoB119
CmoCh11G012540Wild cucumber (PI 183967)cmocpiB086
CmoCh11G012540Wild cucumber (PI 183967)cmocpiB099
CmoCh11G012540Cucumber (Chinese Long) v2cmocuB083
CmoCh11G012540Cucumber (Chinese Long) v2cmocuB096
CmoCh11G012540Melon (DHL92) v3.5.1cmomeB103
CmoCh11G012540Cucurbita pepo (Zucchini)cmocpeB130
CmoCh11G012540Cucumber (Gy14) v2cgybcmoB036
CmoCh11G012540Cucumber (Gy14) v2cgybcmoB049
CmoCh11G012540Melon (DHL92) v3.6.1cmomedB111
CmoCh11G012540Silver-seed gourdcarcmoB0632
CmoCh11G012540Cucumber (Chinese Long) v3cmocucB0097
CmoCh11G012540Cucumber (Chinese Long) v3cmocucB0109