CmoCh11G012340 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G012340
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRNA-directed DNA polymerase homolog
LocationCmo_Chr11 : 7597224 .. 7604276 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTTTGTTGTACAAGCAGGGTTCGAATTAGAACCCTTATTGCATGAAATGTCTGTAAGCACCCCTGCGGGGGTAGACTTAGTATCTAGGGATAGAGTAAAGGATGGCCAAGTAATCATAGGGAACCAAACTTTAAGCATTGACCTGATGGTGGTAAACATGACAGATTTTGACGCCATACTAGGCATGGATTGGTTAGCTGAAAATCGAGCTAGTATAGACTGCCGCAAAAAGGAAGTAAAATTTTCACCATCGACAGGACCTACCTTTAAATTTAAAGGCACAAATATCGGGATTACCCCCAAGGTAGTCTCGATGATGAAAGCAAAAAGGTTAGTCCAACAAGGTGGATGGGCTATATTAGCATGTGTTGTAGACGTAAGAGGAAAGGAAAAGACCCTAGTAAATGTGCCAATAGTAAACGAGTTCCCGAATGTATTTCCGGATGACTTATCTGGAATATCCCCTTCCCGAGCGGTCGACTTTGTCATCGAACTCGAGCCGAGAACTGGGCCTATTTCCAAAGCACCCTATCGCATGGCGCCAGCAGAGTTGAAAGAACTTAAGGCGCAATTGCAAGACTTACTAGATAAAGGATTCATTCAACCTAGCGTGTCCCCCTGGGGTGCGCCAGTGTTGTTTGTTAAGAAGAAAGATGGATCGATGCGTCTGTGCATCGATTATAGAGAGCTAAACAAGAGAACCGTAAAAAATAAATATCCTCTACCTAGAATAGAAGACTTGTTTGATCAACTCAGAGAGGCAACAATATTCTCTAAGATAGATCTTCGGTCCGGTTACCACCAAATTAGGATTAATGAAAAAGACGTACCAAAAACAGCGTTTAGGACAAGGTACGGTCACTACGAGTTTGTAGTGATGTCATTTGGCCTCACTAATGCCCCAACTGTGTTTATGGAGTTAATGAACCGGGTATTCAAAGAATGCCTAGACATGTTCGTGATTGTGTTCATTGACGACATCCTCATATACTCGAGAACTGACCTAGAGCACGAGGAACACCTCCGAAAAGTCCTTACCACCCTAAGAGAGCACAAGTTGTACGCCAAGTTCTCCAAATGCGAATTTTGGTTACGACAAGTCTCTTTCCTAGGACACATGGTGTCAAAGGACGAAATATCTGTAGATCCCACCAAGGTCGAAGCGATCACAAAGTGGGAACGCCCAACTACGGTAACGGAAGTAAGGAGTTTCCTAGGATTGGCGGGATATTATCGAAGGTTCATGCAGGACTTCGCTAAAATATCCTCGCCTTTAAAAAAGTTAACAAAAAAAAGGGGTGCCATTTAGATGGGATGATGCTTGTGAGGCAAGCTTCCAGAACCTAAAAGAGAGATTGGTAACCACCCCGGTACTCATAGTACTCGAGAGCTCAGAAGGATATGAGATCTATAGTGATGCCTCCATGAAAGGACTGGGATGTGTGTTAATGCAACACGGCAAGGTTGTCGCATACGCATCTCGTCAACTTAAAGAATATGAAAAGAACTACCCTACCCATGACCTAGAGTTGGCCGCTGTAGTGTTCGCGCTGAAAATCTGGCGACATTACCTGTATGGCGAAAAAACCCAAATTTTTACCGACCACAAAAGTTTGAAATACTTCTTCACCCAGAAAGAGTTAAACATGAGGCAGAGAAGGTGGTTAGAATTGGTGAAGGATTATGACGTAGATATCCAGTACCACCTTGGGAAAGCAAATGTGGTTGCAGATGCCTTGAGTAGGAAGACGGTCCACTCGTCGGCCCTCATTACGAGGGAAGTAAGGGTACAAAGGGAGTTCGAGCGAGCCAACATAGCTGTAGCGACCGAGGGAGTCGTAGCACAGCTGGCCCGACTCACGGTACAACCTACGCTTAGGCAGAGAATTATTACCTCCCAACGAGAGGATCCTAACCTACAGAAAGTCCTAGGACAGCTAGACGAAAGTCCAGTAGATGGATTCTCGAAGTCATCAGATGAAGGACTATTGTATCAGGGACGCTTATGTGTTCCGGCAATAGAAGATTTAAGGAAGGAAATACTGATGGAAGCTCACAACTCACCATTTTTCATGCATCCAAGAGGTACTAAGATGTACCAAGATTTAAAACAACACTTTTGGTGGAAGAGCATGAAGAGAGATGTGGCCGGGTTTGTGAGCAAGTGCTTAGTTTGTCAACAAGTGAAAGCTCCAAGACAAAAGGCGGCGGGGTTGTTGCAGCCCCTAAGCATACCGGAGTGGAAGTGGGAAAACATAGCGATGGACTTCATAGTAGGTTTACCCAAAACGCCCAAAGGCTACACAGTGATCTGGGTAGTTGTCGATAGGTTGACCAAGTCGGCACACTTCCTACCCGGGAAGGTCACATATACAGTTGACAATTGGGCACAACTGTATGTGAAAGAAATAGTAAGACTACACGGAGTCCCAGTGTCTATAGTGTCGGATCGGGATCCCCGCTTTACGTCAGCGTTTTGGCGTGGACTTCAAAAAGCACTGGGTACCCGCCTCGACTTTAGTACCGCCTTTCACCCCCAAACAGATGGACAAACGGAGCGTTTAAACCAAATTCTAGAGGACATGCTACGCGCTTGCGTACTAGATTTTAAGGAAAGTTGGGATTCCAAACTCCACCTGATGGAATTCTCGTATAACAATAGTTTCCAAGCAACTATTGGAATGGCACCGTTTGAGGCCCTGTACGGAAAACGGTGTAGGTCCCCACTACGTTGGGACAAGGTAGGAGAGAGAGAATTAGTAGGACCCGAGTTGGTTCGACTCACCAATGAGGCTGTCCAGAAAATTCGAGCGAGGATGCGTACCGCTCAAAGTAGACAGAAAAGCTACGCCGATGTAAGGCGTAAAAGCCTGGAGTTTGAGGTGGGGGACCCAGTATTCCTCAAGGTGGCACCTATGAAAGGTGTGTTAAGATTTGGGCATAAGGGCAAGTTAAGTCCTAAATTCATTGGACCATTTGAGATCCTAGAGCGAGTTGGTCTAGTAGTGTATAAGTTAGCCTTACCTCCAGCTCTCTCAGGAGTACATGATGTATTTCACGTGTCGATGCTGAGGAAGTACATCACGGATCCTATCCACGTTATAGACTACAAACCACTCCAGCTCAATGAAGATCTGAGCTACGAGGAAAAACCAGTAAGAATCTTAGCTAGAGAAGTAAAAACCTTACGCAACAGGAGCATTGCGTTCGTTAAGGTACTGTGGCGGAATCACCACAGTGAGGAAGCCACGTGGGAGCGTGAGGACGAAATAAGAGAGAAATACCCCGAGTTGGTACAAGAGTTTGAGACTTTCGAGGACGAAAGTTCTTTTTAGGGGTAGATAATGTAACGACCCGGGAAAGAAAGAAAAAAAAAATATATATATATATATACATATAATAACAATAAATAAATAAAATAATAAAATAAAGTAAAAAAAACAAAAAAAACTCAGTCGCCGGAAAACCCGCGAGTTTTCCGGCGACCGCCAAGTTTCGTGGAACCCACACGAAACGACGGCCACAGCACGCCACCCTCAGCCCACGACACCCAGCATCTTCAGAACACTTGCAAAGGGAGAAAAGAGAGAAAATTTTGAGAGAGAGAGAGAGATTTCGGACAAACGTCGGCGAGTGTCCAGTTTCTCCGACGAACCCTCAAACCACCCTCAAACCGACACCAAACGATCTGTTACCACCATAAGAGGGATCCCTAACGAAAGCACAATATCTCAGGGTGCGTTTTGTGTCATTTTGTAAGCGTCGTCGTCGGTAACCGAGGTTAGAAAATTAGGTTTCTTAATCGATTCTTAGATCTGTGGCTTTTAGGAGCTTTTAGGCCGCAAAACTCCCAGAAAGAAAAGGACGAAGAACAAAGAGGAAAAGGGAAGGAAGAGGACCGAAATTGGCAACGAAAACGCCGCGGGAAGGAGAGAGAAAGCTCGCCGGAAAATCGGCCAAAGTCGGGTAAGGAAGACGAGATCCACGGATCCGGGTCAACCCGAACCCAGAACCCGGGAGAGCCAGCCCGTTCCTCCCTTGGCCTCTGCCTTTGGCCCAGCCCAACTACAGCAGCCCAAACCTCAAACCGGCCCAGAAGCTAAGGTTCAGTTGAACCAACCCAGACTAGACCCACGGTCCAATTGAGCCGGCCTGCAAACCAAACTCCTGCGGTCCAGCCCAGTAAGCCGAGACCCAACGATTAGTCTTGGCCTAATAGCCTTCCACAGCCCACGACCCGAACCACGACCTGAATCGGACTGCGACCTGCGCTTCGACCCGACACTGCCGCCCGACATGGCTTTCTCTGCTACTGCCACGTGTCACACAGCGGCGCAGGCAGTCCCTCAGCTCGGCTCGGCGCAAATGGCTCGGGCTCCCTCCAACGATGCTCCGGCGGCGTTCGGCTCGGCTCACCTATTTTCAGCTCGATTTCCACTGTTCCGACCCTCCCAAATCTGTTTTCGGCCCCGATTAAGGTATCTGATGCCGTTTCAGAGCCGTATTTCACATTTATTAAATTATAGGTAAATTAATTGTGAAATACTAACGAAATATGGTGGACGGTGTGATAGGAAACAAACCCCGGGGACGTAGGGAGCAGCTCTCACGGAACGGGAGCTTACGTTTAGCGATTTAGGGAGTACTTCGGCCAAGGTCAACCAAGTAAGTGGCCTTACTATAGGATAGGCTAAATAAATTGTATGATGCTTGATGTTATGTGCCAGTTTATACATATTTTGTTGAGTGACGCTTGATATGTTTGACGCACGTTGTGGCTTTATGATGAGCATGATGATTGCATGATTTTTACCTTAATATGATGATGTTTTCCATATTGAGCATGCTAGATGATGATGAGTGTCATATTGCATCATGTCGTTAGATCGACATAGGACACAACCCTAAGAGCATGAAAATGATAGTAATATAAATATCCAGGAGTATGCGTTACCTAGAGTAACAAAGAGATGAGACTAGAGGGTTGTGTCAGAAGAGACATTACGATGGATTTAGAGGGACCTCATGCATTTTGTATGTTCATAAGCATAGGGCTACTTCCCCTAGAGATGATGAGTGCGGACGCGCACCTTACGATGAGCGCGAATGCGCACAAGTGCAAAAGCACACAGATGAGAGTGTTCATGAGGCGCATGACACTATGGGGTTCCGCTGACCTCCGGACGTCGCTACAGATTAGCTTGACCAGAGGGTCCAGGGGGTGTGCGAGCACCCTGGGGACTCACATTCACACGTGTGAGTCGTGTGTAGGGAAGTACTACACATCCAATTTGTCCGAGATTGGAGGCCACCCCTAAGATGATTAGAGATAGGTCCCTATTCATGATTGCATGTGTTTGCATTAGCATGGCCCCTATAGTGGGGTCACTTACTGAGTATTTCTTCGGCCGTGTGCCATATTATTTTTTTTTTTTCAGGTAAAGGCAAGGCGCCCATGTACGGTTGACGGTGGCATCGTGATCAGAGACTGTGGCGCGTGCATAGGATAGTTGCATATTTAATTCCTAGTCTTGGTTAGGATAGGGCGTTTGCATTTCATTCATTTATATTAATTAATTTGTAATCGTTTTATTTTATCTTTTTGAACTCCAGCACAATGTTTGAAACACGTAAGTCCGGTAGTGTTTTTCAATGTTTTAATGTATTCTGAAGTTTTAAATTTTTCCGCTAATAAAGATGAGCATGCTTAGATTTTTATTCTGCATTAGAGATGAGCATGAGACGTTAGTGGCGACTCTAGATATGTGGAAATTTAGGGTCGTTACAGTTGGTATCAGAGCTCTAGGNNNNNNNNNNCGGAAAATCGGCCAAAGTCGGGTAAGGAAGACGAGATCCACGGATCCGGGTCAACCCGAACCCAGAACCCGGGAGAGCCAGCCCGTTCCTCCCTTGGCCTCTGCCTTTGGCCCAGCCCAACTACAGCAGCCCAAACCTCAAACCGGCCCAGAAGCTAAGGTTCAGTTGAACCAACCCAGACTAGACCCACGGTCCAATTGAGCCGGCCTGCAAACCAAACTCCTGCGGTCCAGCCCAGTAAGCCGAGACCCAACGATTAGTCTTGGCCTAATAGCCTTCCACAGCCCACGACCCGAACCACGACCTGAATCGGACTGCGACCTGCGCTTCGACCCGACACTGCCGCCCGACATGGCTTTCTCTGCTACTGCCACGTGTCACACAGCGGCGCAGGCAGTCCCTCAGCTCGGCTCGGCGCAAATGGCTCGGGCTCCCTCCAACGATGCTCCGGCGGCGTTCGGCTCGGCTCACCTATTTTCAGCTCGATTTCCACTGTTCCGACCCTCCCAAATCTGTTTTCGGCCCCGATTAAGGTATCTGATGCCGTTTCAGAGCCGTATTTCACATTTATTAAATTATAGGTAAATTAATTGTGAAATACTAACGAAATATGGTGGACGGTGTGATAGGAAACAAACCCCGGGGACGTAGGGAGCAGCTCTCACGGAACGGGAGCTTACGTTTAGCGATTTAGGGAGTACTTCGGCCAAGGTCAACCAAGTAAGTGGCCTTACTATAGGATAGGCTAAATAAATTGTATGATGCTTGATGTTATGTGCCAGTTTATACATATTTTGTTGAGTGACGCTTGATATGTTTGACGCACGTTGTGGCTTTATGATGAGCATGATGATTGCATGATTTTTACCTTAATATGATGATGTTTTCCATATTGAGCATGCTAGATGATGATGAGTGTCATATTGCATCATGTCGTTAGATCGACATAGGACACAACCCTAAGAGCATGAAAATGATAGTAATATAAATATCCAGGAGTATGCGTTACCTAGAGTAACAAAGAGATGAGACTAGAGGGTTGTGTCAGAAGAGACATTACGATGGATTTAGAGGGACCTCATGCATTTTGTATGTTCATAAGCATAGGGCTACTTCCCCTAGAGATGATGAGTGCGGACGCGCACCTTACGATGAGCGCGAATGCGCACAAGTGCAAAAGCACACAGATGAGAGTGTTCATGAGGCGCATGACACTATGGGGTTCCGCTGA

mRNA sequence

ATGCCTTTTGTTGTACAAGCAGGGTTCGAATTAGAACCCTTATTGCATGAAATGTCTGTAAGCACCCCTGCGGGGGTAGACTTAGTATCTAGGGATAGAGTAAAGGATGGCCAAGTAATCATAGGGAACCAAACTTTAAGCATTGACCTGATGGTGGTAAACATGACAGATTTTGACGCCATACTAGGCATGGATTGGTTAGCTGAAAATCGAGCTAGTATAGACTGCCGCAAAAAGGAAGTAAAATTTTCACCATCGACAGGACCTACCTTTAAATTTAAAGGCACAAATATCGGGATTACCCCCAAGGTAGTCTCGATGATGAAAGCAAAAAGGTTAGTCCAACAAGGTGGATGGGCTATATTAGCATGTGTTGTAGACGTAAGAGGAAAGGAAAAGACCCTAGTAAATGTGCCAATAGTAAACGAGTTCCCGAATGTATTTCCGGATGACTTATCTGGAATATCCCCTTCCCGAGCGGTCGACTTTGTCATCGAACTCGAGCCGAGAACTGGGCCTATTTCCAAAGCACCCTATCGCATGGCGCCAGCAGAGTTGAAAGAACTTAAGGCGCAATTGCAAGACTTACTAGATAAAGGATTCATTCAACCTAGCGTGTCCCCCTGGGGTGCGCCAGTGTTGTTTGTTAAGAAGAAAGATGGATCGATGCGTCTGTGCATCGATTATAGAGAGCTAAACAAGAGAACCGTAAAAAATAAATATCCTCTACCTAGAATAGAAGACTTGTTTGATCAACTCAGAGAGGCAACAATATTCTCTAAGATAGATCTTCGGTCCGGTTACCACCAAATTAGGATTAATGAAAAAGACGTACCAAAAACAGCGTTTAGGACAAGGTACGGTCACTACGAGTTTGTAGTGATGTCATTTGGCCTCACTAATGCCCCAACTGTGTTTATGGAGTTAATGAACCGGGTATTCAAAGAATGCCTAGACATGTTCGTGATTGTGTTCATTGACGACATCCTCATATACTCGAGAACTGACCTAGAGCACGAGGAACACCTCCGAAAAGTCCTTACCACCCTAAGAGAGCACAAGTTGTACGCCAAGTTCTCCAAATGCGAATTTTGGTTACGACAAGTCTCTTTCCTAGGACACATGGTGTCAAAGGACGAAATATCTGTAGATCCCACCAAGGTCGAAGCGATCACAAAGTGGGAACGCCCAACTACGAACCTAAAAGAGAGATTGGTAACCACCCCGGTACTCATAGTACTCGAGAGCTCAGAAGGATATGAGATCTATAGTGATGCCTCCATGAAAGGACTGGGATGTGTGTTAATGCAACACGGCAAGGTTGTCGCATACGCATCTCGTCAACTTAAAGAATATGAAAAGAACTACCCTACCCATGACCTAGAGTTGGCCGCTGTAGTGTTCGCGCTGAAAATCTGGCGACATTACCTGTATGGCGAAAAAACCCAAATTTTTACCGACCACAAAAGTTTGAAATACTTCTTCACCCAGAAAGAGTTAAACATGAGGCAGAGAAGGTGGTTAGAATTGGTGAAGGATTATGACGTAGATATCCAGTACCACCTTGGGAAAGCAAATGTGGTTGCAGATGCCTTGAGTAGGAAGACGGTCCACTCGTCGGCCCTCATTACGAGGGAAGTAAGGGTACAAAGGGAGTTCGAGCGAGCCAACATAGCTGTAGCGACCGAGGGAGTCGTAGCACAGCTGGCCCGACTCACGGTACAACCTACGCTTAGGCAGAGAATTATTACCTCCCAACGAGAGGATCCTAACCTACAGAAAGTCCTAGGACAGCTAGACGAAAGTCCAGTAGATGGATTCTCGAAGTCATCAGATGAAGGACTATTGTATCAGGGACGCTTATGTGTTCCGGCAATAGAAGATTTAAGGAAGGAAATACTGATGGAAGCTCACAACTCACCATTTTTCATGCATCCAAGAGGTACTAAGATGTACCAAGATTTAAAACAACACTTTTGGTGGAAGAGCATGAAGAGAGATGTGGCCGGGTTTGTGAGCAAGTGCTTAGTTTGTCAACAAGTGAAAGCTCCAAGACAAAAGGCGGCGGGGTTGTTGCAGCCCCTAAGCATACCGGAGTGGAAGTGGGAAAACATAGCGATGGACTTCATAGTAGGTTTACCCAAAACGCCCAAAGGCTACACAGTGATCTGGGTAGTTGTCGATAGGTTGACCAAGTCGGCACACTTCCTACCCGGGAAGGTCACATATACAGTTGACAATTGGGCACAACTGTATGTGAAAGAAATAGTAAGACTACACGGAGTCCCAGTGTCTATAGTGTCGGATCGGGATCCCCGCTTTACGTCAGCGTTTTGGCGTGGACTTCAAAAAGCACTGGGTACCCGCCTCGACTTTAGTACCGCCTTTCACCCCCAAACAGATGGACAAACGGAGCGTTTAAACCAAATTCTAGAGGACATGCTACGCGCTTGCGTACTAGATTTTAAGGAAAGTTGGGATTCCAAACTCCACCTGATGGAATTCTCGTATAACAATAGTTTCCAAGCAACTATTGGAATGGCACCGTTTGAGGCCCTGTACGGAAAACGGTGTAGGTCCCCACTACGTTGGGACAAGGTAGGAGAGAGAGAATTAGTAGGACCCGAGTTGGTTCGACTCACCAATGAGGCTGTCCAGAAAATTCGAGCGAGGATGCGTACCGCTCAAAGTAGACAGAAAAGCTACGCCGATGTAAGGCGTAAAAGCCTGGAGTTTGAGGTGGGGGACCCAGTATTCCTCAAGGTGGCACCTATGAAAGGTGTGTTAAGATTTGGGCATAAGGGCAAGTTAAGTCCTAAATTCATTGGACCATTTGAGATCCTAGAGCGAGTTGGTCTAGTAGTGTATAAGTTAGCCTTACCTCCAGCTCTCTCAGGAGTACATGATGTATTTCACGTGTCGATGCTGAGGAAGTACATCACGGATCCTATCCACGTTATAGACTACAAACCACTCCAGCTCAATGAAGATCTGAGCTACGAGGAAAAACCAGTAAGAATCTTAGCTAGAGAAGTAAAAACCTTACGCAACAGGAGCATTGCGTTCGTTAAGGAGCTTTTAGGCCGCAAAACTCCCAGAAAGAAAAGGACGAAGAACAAAGAGGAAAAGGGAAGGAAGAGGACCGAAATTGGCAACGAAAACGCCGCGGGAAGGAGAGAGAAAGCTCGCCGGAAAATCGGCCAAAGTCGGCCCAACTACAGCAGCCCAAACCTCAAACCGGCCCAGAAGCTAAGCCCACGACCCGAACCACGACCTGAATCGGACTGCGACCTGCGCTTCGACCCGACACTGCCGCCCGACATGGCTTTCTCTGCTACTGCCACGTGTCACACAGCGGCGCAGGCAGTCCCTCAGCTCGGCTCGGCGCAAATGGCTCGGGCTCCCTCCAACGATGCTCCGGCGGCGTTCGGCTCGGCTCACCTATTTTCAGCTCGATTTCCACTGTTCCGACCCTCCCAAATCTGTTTTCGGCCCCGATTAAGCCCACGACCCGAACCACGACCTGAATCGGACTGCGACCTGCGCTTCGACCCGACACTGCCGCCCGACATGGCTTTCTCTGCTACTGCCACGTGTCACACAGCGGCGCAGGCAGTCCCTCAGCTCGGCTCGGCGCAAATGGCTCGGGCTCCCTCCAACGATGCTCCGGCGGCGTTCGGCTCGGCTCACCTATTTTCAGCTCGATTTCCACTGTTCCGACCCTCCCAAATCTGTTTTCGGCCCCGATTAAGGGCTACTTCCCCTAGAGATGATGAGTGCGGACGCGCACCTTACGATGAGCGCGAATGCGCACAAGTGCAAAAGCACACAGATGAGAGTGTTCATGAGGCGCATGACACTATGGGGTTCCGCTGA

Coding sequence (CDS)

ATGCCTTTTGTTGTACAAGCAGGGTTCGAATTAGAACCCTTATTGCATGAAATGTCTGTAAGCACCCCTGCGGGGGTAGACTTAGTATCTAGGGATAGAGTAAAGGATGGCCAAGTAATCATAGGGAACCAAACTTTAAGCATTGACCTGATGGTGGTAAACATGACAGATTTTGACGCCATACTAGGCATGGATTGGTTAGCTGAAAATCGAGCTAGTATAGACTGCCGCAAAAAGGAAGTAAAATTTTCACCATCGACAGGACCTACCTTTAAATTTAAAGGCACAAATATCGGGATTACCCCCAAGGTAGTCTCGATGATGAAAGCAAAAAGGTTAGTCCAACAAGGTGGATGGGCTATATTAGCATGTGTTGTAGACGTAAGAGGAAAGGAAAAGACCCTAGTAAATGTGCCAATAGTAAACGAGTTCCCGAATGTATTTCCGGATGACTTATCTGGAATATCCCCTTCCCGAGCGGTCGACTTTGTCATCGAACTCGAGCCGAGAACTGGGCCTATTTCCAAAGCACCCTATCGCATGGCGCCAGCAGAGTTGAAAGAACTTAAGGCGCAATTGCAAGACTTACTAGATAAAGGATTCATTCAACCTAGCGTGTCCCCCTGGGGTGCGCCAGTGTTGTTTGTTAAGAAGAAAGATGGATCGATGCGTCTGTGCATCGATTATAGAGAGCTAAACAAGAGAACCGTAAAAAATAAATATCCTCTACCTAGAATAGAAGACTTGTTTGATCAACTCAGAGAGGCAACAATATTCTCTAAGATAGATCTTCGGTCCGGTTACCACCAAATTAGGATTAATGAAAAAGACGTACCAAAAACAGCGTTTAGGACAAGGTACGGTCACTACGAGTTTGTAGTGATGTCATTTGGCCTCACTAATGCCCCAACTGTGTTTATGGAGTTAATGAACCGGGTATTCAAAGAATGCCTAGACATGTTCGTGATTGTGTTCATTGACGACATCCTCATATACTCGAGAACTGACCTAGAGCACGAGGAACACCTCCGAAAAGTCCTTACCACCCTAAGAGAGCACAAGTTGTACGCCAAGTTCTCCAAATGCGAATTTTGGTTACGACAAGTCTCTTTCCTAGGACACATGGTGTCAAAGGACGAAATATCTGTAGATCCCACCAAGGTCGAAGCGATCACAAAGTGGGAACGCCCAACTACGAACCTAAAAGAGAGATTGGTAACCACCCCGGTACTCATAGTACTCGAGAGCTCAGAAGGATATGAGATCTATAGTGATGCCTCCATGAAAGGACTGGGATGTGTGTTAATGCAACACGGCAAGGTTGTCGCATACGCATCTCGTCAACTTAAAGAATATGAAAAGAACTACCCTACCCATGACCTAGAGTTGGCCGCTGTAGTGTTCGCGCTGAAAATCTGGCGACATTACCTGTATGGCGAAAAAACCCAAATTTTTACCGACCACAAAAGTTTGAAATACTTCTTCACCCAGAAAGAGTTAAACATGAGGCAGAGAAGGTGGTTAGAATTGGTGAAGGATTATGACGTAGATATCCAGTACCACCTTGGGAAAGCAAATGTGGTTGCAGATGCCTTGAGTAGGAAGACGGTCCACTCGTCGGCCCTCATTACGAGGGAAGTAAGGGTACAAAGGGAGTTCGAGCGAGCCAACATAGCTGTAGCGACCGAGGGAGTCGTAGCACAGCTGGCCCGACTCACGGTACAACCTACGCTTAGGCAGAGAATTATTACCTCCCAACGAGAGGATCCTAACCTACAGAAAGTCCTAGGACAGCTAGACGAAAGTCCAGTAGATGGATTCTCGAAGTCATCAGATGAAGGACTATTGTATCAGGGACGCTTATGTGTTCCGGCAATAGAAGATTTAAGGAAGGAAATACTGATGGAAGCTCACAACTCACCATTTTTCATGCATCCAAGAGGTACTAAGATGTACCAAGATTTAAAACAACACTTTTGGTGGAAGAGCATGAAGAGAGATGTGGCCGGGTTTGTGAGCAAGTGCTTAGTTTGTCAACAAGTGAAAGCTCCAAGACAAAAGGCGGCGGGGTTGTTGCAGCCCCTAAGCATACCGGAGTGGAAGTGGGAAAACATAGCGATGGACTTCATAGTAGGTTTACCCAAAACGCCCAAAGGCTACACAGTGATCTGGGTAGTTGTCGATAGGTTGACCAAGTCGGCACACTTCCTACCCGGGAAGGTCACATATACAGTTGACAATTGGGCACAACTGTATGTGAAAGAAATAGTAAGACTACACGGAGTCCCAGTGTCTATAGTGTCGGATCGGGATCCCCGCTTTACGTCAGCGTTTTGGCGTGGACTTCAAAAAGCACTGGGTACCCGCCTCGACTTTAGTACCGCCTTTCACCCCCAAACAGATGGACAAACGGAGCGTTTAAACCAAATTCTAGAGGACATGCTACGCGCTTGCGTACTAGATTTTAAGGAAAGTTGGGATTCCAAACTCCACCTGATGGAATTCTCGTATAACAATAGTTTCCAAGCAACTATTGGAATGGCACCGTTTGAGGCCCTGTACGGAAAACGGTGTAGGTCCCCACTACGTTGGGACAAGGTAGGAGAGAGAGAATTAGTAGGACCCGAGTTGGTTCGACTCACCAATGAGGCTGTCCAGAAAATTCGAGCGAGGATGCGTACCGCTCAAAGTAGACAGAAAAGCTACGCCGATGTAAGGCGTAAAAGCCTGGAGTTTGAGGTGGGGGACCCAGTATTCCTCAAGGTGGCACCTATGAAAGGTGTGTTAAGATTTGGGCATAAGGGCAAGTTAAGTCCTAAATTCATTGGACCATTTGAGATCCTAGAGCGAGTTGGTCTAGTAGTGTATAAGTTAGCCTTACCTCCAGCTCTCTCAGGAGTACATGATGTATTTCACGTGTCGATGCTGAGGAAGTACATCACGGATCCTATCCACGTTATAGACTACAAACCACTCCAGCTCAATGAAGATCTGAGCTACGAGGAAAAACCAGTAAGAATCTTAGCTAGAGAAGTAAAAACCTTACGCAACAGGAGCATTGCGTTCGTTAAGGAGCTTTTAGGCCGCAAAACTCCCAGAAAGAAAAGGACGAAGAACAAAGAGGAAAAGGGAAGGAAGAGGACCGAAATTGGCAACGAAAACGCCGCGGGAAGGAGAGAGAAAGCTCGCCGGAAAATCGGCCAAAGTCGGCCCAACTACAGCAGCCCAAACCTCAAACCGGCCCAGAAGCTAAGCCCACGACCCGAACCACGACCTGAATCGGACTGCGACCTGCGCTTCGACCCGACACTGCCGCCCGACATGGCTTTCTCTGCTACTGCCACGTGTCACACAGCGGCGCAGGCAGTCCCTCAGCTCGGCTCGGCGCAAATGGCTCGGGCTCCCTCCAACGATGCTCCGGCGGCGTTCGGCTCGGCTCACCTATTTTCAGCTCGATTTCCACTGTTCCGACCCTCCCAAATCTGTTTTCGGCCCCGATTAAGCCCACGACCCGAACCACGACCTGAATCGGACTGCGACCTGCGCTTCGACCCGACACTGCCGCCCGACATGGCTTTCTCTGCTACTGCCACGTGTCACACAGCGGCGCAGGCAGTCCCTCAGCTCGGCTCGGCGCAAATGGCTCGGGCTCCCTCCAACGATGCTCCGGCGGCGTTCGGCTCGGCTCACCTATTTTCAGCTCGATTTCCACTGTTCCGACCCTCCCAAATCTGTTTTCGGCCCCGATTAAGGGCTACTTCCCCTAGAGATGATGAGTGCGGACGCGCACCTTACGATGAGCGCGAATGCGCACAAGTGCAAAAGCACACAGATGAGAGTGTTCATGAGGCGCATGACACTATGGGGTTCCGCTGA
Homology
[Close]
BLAST of CmoCh11G012340 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 429.5 bits (1103), Expect = 1.3e-118
Identity = 292/903 (32.34%), Postives = 441/903 (48.84%), Query Frame = 1 

Query: 149  PDDLSGISPSRAVDFVIELEPRTGPISKAPYRMAPAELKELKAQLQDLLDKGFIQPSVSP 208
            P D++ I     V   IE++P        PY +     +E+   +Q LLD  FI PS SP
Sbjct: 576  PADINNIP----VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 635

Query: 209  WGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLREATIFSKIDLRSGY 268
              +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRI++L  ++  A IF+ +DL SGY
Sbjct: 636  CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 695

Query: 269  HQIRINEKDVPKTAFRTRYGHYEFVVMSFGLTNAPTVFMELMNRVFKECLDMFVIVFIDD 328
            HQI +  KD  KTAF T  G YE+ VM FGL NAP+ F   M   F++    FV V++DD
Sbjct: 696  HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 755

Query: 329  ILIYSRTDLEHEEHLRKVLTTLREHKLYAKFSKCEFWLRQVSFLGHMVSKDEISVDPTKV 388
            ILI+S +  EH +HL  VL  L+   L  K  KC+F   +  FLG+ +   +I+    K 
Sbjct: 756  ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 815

Query: 389  EAITKWERPTT-----------------------------------------------NL 448
             AI  +  P T                                                L
Sbjct: 816  AAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIDKL 875

Query: 449  KERLVTTPVLIVLESSEGYEIYSDASMKGLGCVLMQHGK------VVAYASRQLKEYEKN 508
            K+ L  +PVL+   +   Y + +DAS  G+G VL +         VV Y S+ L+  +KN
Sbjct: 876  KDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKN 935

Query: 509  YPTHDLELAAVVFALKIWRHYLYGEKTQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD 568
            YP  +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R +RWL+ +  YD
Sbjct: 936  YPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYD 995

Query: 569  VDIQYHLGKANVVADALSRKTVHSSALITREVRVQREFERANIAVATEGVVAQLARLTVQ 628
              ++Y  G  NVVADA+SR     +   +R +  +              V+  +  LT Q
Sbjct: 996  FTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELT-Q 1055

Query: 629  PTLRQRIITSQREDPNLQKVLGQLDESPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILM 688
              +    +++ R   + QK L +L E+    +S   DE + YQ RL VP I+     + +
Sbjct: 1056 HNVTPEDMSAFR---SYQKKL-ELSETFRKNYS-LEDEMIYYQDRLVVP-IKQQNAVMRL 1115

Query: 689  EAHNSPFFMHPRGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKAAGLLQPL 748
               ++ F  H   T     +   ++W  ++  +  ++  C+ CQ +K+ R +  GLLQPL
Sbjct: 1116 YHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPL 1175

Query: 749  SIPEWKWENIAMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKE 808
             I E +W +I+MDF+ GLP T     +I VVVDR +K AHF+  + T        L  + 
Sbjct: 1176 PIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRY 1235

Query: 809  IVRLHGVPVSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTERLNQILEDML 868
            I   HG P +I SDRD R T+  ++ L K LG +   S+A HPQTDGQ+ER  Q L  +L
Sbjct: 1236 IFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLL 1295

Query: 869  RACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPL--RWDKVGERELV 928
            RA      ++W   L  +EF YN++   T+G +PFE   G    +P     D+V  R   
Sbjct: 1296 RAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNARSFT 1355

Query: 929  GPELVRLTNEAVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRFGH 988
              EL +       + + ++  AQ   ++  + RRK L   +GD V +         + G 
Sbjct: 1356 AVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVH---RDAYFKKGA 1415

Query: 989  KGKLSPKFIGPFEILERVGLVVYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYKPLQ 997
              K+   ++GPF +++++    Y+L L  +    H V +V  L+K++  P      KP+ 
Sbjct: 1416 YMKVQQIYVGPFRVVKKINDNAYELDL-NSHKKKHRVINVQFLKKFVYRPDAYPKNKPIS 1461

[Close]
BLAST of CmoCh11G012340 vs. Swiss-Prot
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 5.6e-69
Identity = 181/610 (29.67%), Postives = 299/610 (49.02%), Query Frame = 1 

Query: 385  PTKVEAITKWERPTTNLKERLVTTPVLIVLESSEGYEIYSDASMKGLGCVLMQHGK---- 444
            PT+ +AI        N+K+ LV+ PVL   + S+   + +DAS   +G VL Q       
Sbjct: 680  PTQTQAIE-------NIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKY 739

Query: 445  -VVAYASRQLKEYEKNYPTHDLELAAVVFALKIWRHYLYG--EKTQIFTDHKSLKYFFTQ 504
              V Y S ++ + + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T 
Sbjct: 740  YPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITN 799

Query: 505  KEL--NMRQRRWLELVKDYDVDIQYHLGKANVVADALSRKTVHSSALITREVRVQREFER 564
            +    N R  RW   ++D++ +I Y  G AN +ADALSR       ++     + ++ E 
Sbjct: 800  ESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSED 859

Query: 565  ANIAVATEGVVAQLARLTVQPTLRQRIITSQREDPNLQKVLGQLDESPVDGFSKSSDEGL 624
             +I    +        +++    + +++T    D  L  +L   D+   +       +GL
Sbjct: 860  NSINFVNQ--------ISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLK--DGL 919

Query: 625  LYQGR--LCVPAIEDLRKEILMEAHNSPFFMHPRGTKMYQDLKQHFWWKSMKRDVAGFVS 684
            L   +  + +P    L + I+ + H     +HP    +   + + F WK +++ +  +V 
Sbjct: 920  LINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQ 979

Query: 685  KCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAMDFIVGLPKTPKGYTVIWVVVDRLTKS 744
             C  CQ  K+   K  G LQP+   E  WE+++MDFI  LP++  GY  ++VVVDR +K 
Sbjct: 980  NCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKM 1039

Query: 745  AHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIVSDRDPRFTSAFWRGLQKALGTRLDFS 804
            A  +P   + T +  A+++ + ++   G P  I++D D  FTS  W+         + FS
Sbjct: 1040 AILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFS 1099

Query: 805  TAFHPQTDGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEAL 864
              + PQTDGQTER NQ +E +LR        +W   + L++ SYNN+  +   M PFE +
Sbjct: 1100 LPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1159

Query: 865  YG-KRCRSPLRWDKVGERELVGPELVRLTNEAVQKIRARMRTAQSRQKSYADVRRKSL-E 924
            +      SPL      ++     E  + T +  Q ++  + T   + K Y D++ + + E
Sbjct: 1160 HRYSPALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEE 1219

Query: 925  FEVGDPVFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGLVVYKLALPPALSGV-HD 980
            F+ GD V +K    +    F HK  KL+P F GPF +L++ G   Y+L LP ++  +   
Sbjct: 1220 FQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSS 1257

[Close]
BLAST of CmoCh11G012340 vs. Swiss-Prot
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 5.6e-69
Identity = 181/610 (29.67%), Postives = 299/610 (49.02%), Query Frame = 1 

Query: 385  PTKVEAITKWERPTTNLKERLVTTPVLIVLESSEGYEIYSDASMKGLGCVLMQHGK---- 444
            PT+ +AI        N+K+ LV+ PVL   + S+   + +DAS   +G VL Q       
Sbjct: 680  PTQTQAIE-------NIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKY 739

Query: 445  -VVAYASRQLKEYEKNYPTHDLELAAVVFALKIWRHYLYG--EKTQIFTDHKSLKYFFTQ 504
              V Y S ++ + + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T 
Sbjct: 740  YPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITN 799

Query: 505  KEL--NMRQRRWLELVKDYDVDIQYHLGKANVVADALSRKTVHSSALITREVRVQREFER 564
            +    N R  RW   ++D++ +I Y  G AN +ADALSR       ++     + ++ E 
Sbjct: 800  ESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSED 859

Query: 565  ANIAVATEGVVAQLARLTVQPTLRQRIITSQREDPNLQKVLGQLDESPVDGFSKSSDEGL 624
             +I    +        +++    + +++T    D  L  +L   D+   +       +GL
Sbjct: 860  NSINFVNQ--------ISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLK--DGL 919

Query: 625  LYQGR--LCVPAIEDLRKEILMEAHNSPFFMHPRGTKMYQDLKQHFWWKSMKRDVAGFVS 684
            L   +  + +P    L + I+ + H     +HP    +   + + F WK +++ +  +V 
Sbjct: 920  LINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQ 979

Query: 685  KCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAMDFIVGLPKTPKGYTVIWVVVDRLTKS 744
             C  CQ  K+   K  G LQP+   E  WE+++MDFI  LP++  GY  ++VVVDR +K 
Sbjct: 980  NCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKM 1039

Query: 745  AHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIVSDRDPRFTSAFWRGLQKALGTRLDFS 804
            A  +P   + T +  A+++ + ++   G P  I++D D  FTS  W+         + FS
Sbjct: 1040 AILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFS 1099

Query: 805  TAFHPQTDGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEAL 864
              + PQTDGQTER NQ +E +LR        +W   + L++ SYNN+  +   M PFE +
Sbjct: 1100 LPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1159

Query: 865  YG-KRCRSPLRWDKVGERELVGPELVRLTNEAVQKIRARMRTAQSRQKSYADVRRKSL-E 924
            +      SPL      ++     E  + T +  Q ++  + T   + K Y D++ + + E
Sbjct: 1160 HRYSPALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEE 1219

Query: 925  FEVGDPVFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGLVVYKLALPPALSGV-HD 980
            F+ GD V +K    +    F HK  KL+P F GPF +L++ G   Y+L LP ++  +   
Sbjct: 1220 FQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSS 1257

[Close]
BLAST of CmoCh11G012340 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 5.6e-69
Identity = 181/610 (29.67%), Postives = 299/610 (49.02%), Query Frame = 1 

Query: 385  PTKVEAITKWERPTTNLKERLVTTPVLIVLESSEGYEIYSDASMKGLGCVLMQHGK---- 444
            PT+ +AI        N+K+ LV+ PVL   + S+   + +DAS   +G VL Q       
Sbjct: 680  PTQTQAIE-------NIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKY 739

Query: 445  -VVAYASRQLKEYEKNYPTHDLELAAVVFALKIWRHYLYG--EKTQIFTDHKSLKYFFTQ 504
              V Y S ++ + + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T 
Sbjct: 740  YPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITN 799

Query: 505  KEL--NMRQRRWLELVKDYDVDIQYHLGKANVVADALSRKTVHSSALITREVRVQREFER 564
            +    N R  RW   ++D++ +I Y  G AN +ADALSR       ++     + ++ E 
Sbjct: 800  ESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSED 859

Query: 565  ANIAVATEGVVAQLARLTVQPTLRQRIITSQREDPNLQKVLGQLDESPVDGFSKSSDEGL 624
             +I    +        +++    + +++T    D  L  +L   D+   +       +GL
Sbjct: 860  NSINFVNQ--------ISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLK--DGL 919

Query: 625  LYQGR--LCVPAIEDLRKEILMEAHNSPFFMHPRGTKMYQDLKQHFWWKSMKRDVAGFVS 684
            L   +  + +P    L + I+ + H     +HP    +   + + F WK +++ +  +V 
Sbjct: 920  LINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQ 979

Query: 685  KCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAMDFIVGLPKTPKGYTVIWVVVDRLTKS 744
             C  CQ  K+   K  G LQP+   E  WE+++MDFI  LP++  GY  ++VVVDR +K 
Sbjct: 980  NCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKM 1039

Query: 745  AHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIVSDRDPRFTSAFWRGLQKALGTRLDFS 804
            A  +P   + T +  A+++ + ++   G P  I++D D  FTS  W+         + FS
Sbjct: 1040 AILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFS 1099

Query: 805  TAFHPQTDGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEAL 864
              + PQTDGQTER NQ +E +LR        +W   + L++ SYNN+  +   M PFE +
Sbjct: 1100 LPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1159

Query: 865  YG-KRCRSPLRWDKVGERELVGPELVRLTNEAVQKIRARMRTAQSRQKSYADVRRKSL-E 924
            +      SPL      ++     E  + T +  Q ++  + T   + K Y D++ + + E
Sbjct: 1160 HRYSPALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEE 1219

Query: 925  FEVGDPVFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGLVVYKLALPPALSGV-HD 980
            F+ GD V +K    +    F HK  KL+P F GPF +L++ G   Y+L LP ++  +   
Sbjct: 1220 FQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSS 1257

[Close]
BLAST of CmoCh11G012340 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 5.6e-69
Identity = 181/610 (29.67%), Postives = 299/610 (49.02%), Query Frame = 1 

Query: 385  PTKVEAITKWERPTTNLKERLVTTPVLIVLESSEGYEIYSDASMKGLGCVLMQHGK---- 444
            PT+ +AI        N+K+ LV+ PVL   + S+   + +DAS   +G VL Q       
Sbjct: 680  PTQTQAIE-------NIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKY 739

Query: 445  -VVAYASRQLKEYEKNYPTHDLELAAVVFALKIWRHYLYG--EKTQIFTDHKSLKYFFTQ 504
              V Y S ++ + + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T 
Sbjct: 740  YPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITN 799

Query: 505  KEL--NMRQRRWLELVKDYDVDIQYHLGKANVVADALSRKTVHSSALITREVRVQREFER 564
            +    N R  RW   ++D++ +I Y  G AN +ADALSR       ++     + ++ E 
Sbjct: 800  ESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSED 859

Query: 565  ANIAVATEGVVAQLARLTVQPTLRQRIITSQREDPNLQKVLGQLDESPVDGFSKSSDEGL 624
             +I    +        +++    + +++T    D  L  +L   D+   +       +GL
Sbjct: 860  NSINFVNQ--------ISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLK--DGL 919

Query: 625  LYQGR--LCVPAIEDLRKEILMEAHNSPFFMHPRGTKMYQDLKQHFWWKSMKRDVAGFVS 684
            L   +  + +P    L + I+ + H     +HP    +   + + F WK +++ +  +V 
Sbjct: 920  LINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQ 979

Query: 685  KCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAMDFIVGLPKTPKGYTVIWVVVDRLTKS 744
             C  CQ  K+   K  G LQP+   E  WE+++MDFI  LP++  GY  ++VVVDR +K 
Sbjct: 980  NCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKM 1039

Query: 745  AHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIVSDRDPRFTSAFWRGLQKALGTRLDFS 804
            A  +P   + T +  A+++ + ++   G P  I++D D  FTS  W+         + FS
Sbjct: 1040 AILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFS 1099

Query: 805  TAFHPQTDGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEAL 864
              + PQTDGQTER NQ +E +LR        +W   + L++ SYNN+  +   M PFE +
Sbjct: 1100 LPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1159

Query: 865  YG-KRCRSPLRWDKVGERELVGPELVRLTNEAVQKIRARMRTAQSRQKSYADVRRKSL-E 924
            +      SPL      ++     E  + T +  Q ++  + T   + K Y D++ + + E
Sbjct: 1160 HRYSPALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEE 1219

Query: 925  FEVGDPVFLKVAPMKGVLRFGHK-GKLSPKFIGPFEILERVGLVVYKLALPPALSGV-HD 980
            F+ GD V +K    +    F HK  KL+P F GPF +L++ G   Y+L LP ++  +   
Sbjct: 1220 FQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSS 1257

[Close]
BLAST of CmoCh11G012340 vs. TrEMBL
Match: Q84KB0_CUCME (Pol protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 1196.8 bits (3095), Expect = 0.0e+00
Identity = 623/917 (67.94%), Postives = 715/917 (77.97%), Query Frame = 1 

Query: 181  MAPAELKELKAQLQDLLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNK 240
            MAPAELKELK QLQ+LLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNK TVKN+
Sbjct: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60

Query: 241  YPLPRIEDLFDQLREATIFSKIDLRSGYHQIRINEKDVPKTAFRTRYGHYEFVVMSFGLT 300
            YPLPRI+DLFDQL+ AT+FSKIDLRSGYHQ+RI ++DVPKTAFR+RYGHY+F+VMSFGLT
Sbjct: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLT 120

Query: 301  NAPTVFMELMNRVFKECLDMFVIVFIDDILIYSRTDLEHEEHLRKVLTTL---------- 360
            NAP VFM+LMNRVF+E LD FVIVFIDDILIYS+T+ EHEEHLR VL TL          
Sbjct: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180

Query: 361  -------------------REHKLYAKFSKCEFWLRQV------SFLG----HMVSKDEI 420
                                     AK      W R        SFLG    +    +  
Sbjct: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240

Query: 421  SVDPTKVEAITK------WERPTTN----LKERLVTTPVLIVLESSEGYEIYSDASMKGL 480
            S   T +  +T+      W +   +    LK++LVT PVL V + S  + IYSDAS KGL
Sbjct: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300

Query: 481  GCVLMQHGKVVAYASRQLKEYEKNYPTHDLELAAVVFALKIWRHYLYGEKTQIFTDHKSL 540
            GCVLMQ GKVVAYASRQLK +E+NYPTHDLELAAVVFALKIWRHYLYGEK QIFTDHKSL
Sbjct: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360

Query: 541  KYFFTQKELNMRQRRWLELVKDYDVDIQYHLGKANVVADALSRKTVHSSALITREVRVQR 600
            KYFFTQKELNMRQRRWLELVKDYD +I YH GKANVVADALSRK  HS+ALITR+  + R
Sbjct: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420

Query: 601  EFERANIAVATEGVVAQLARLTVQPTLRQRIITSQREDPNLQKVLGQLDESPVDGFSKSS 660
            + ERA IAV    V  QLA+LTVQPTLRQRII +Q  DP L +  G  +      FS SS
Sbjct: 421  DLERAEIAVLVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480

Query: 661  DEGLLYQGRLCVPAIEDLRKEILMEAHNSPFFMHPRGTKMYQDLKQHF-WWKSMKRDVAG 720
            D GLL++ RLCVP+   ++ E+L EAH+SPF MHP  T+     +  F   ++MKR+VA 
Sbjct: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTEDVSGPEAGFIGGRNMKREVAE 540

Query: 721  FVSKCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAMDFIVGLPKTPKGYTVIWVVVDRL 780
            FVSKCLVCQQVKAPRQK AGLLQPLSIPEWKWEN++MDFI GLP+T +G+TVIWVVVDRL
Sbjct: 541  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRL 600

Query: 781  TKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIVSDRDPRFTSAFWRGLQKALGTRL 840
            TKSAHF+PGK TYT   WAQLY+ EIVRLHGVPVSIVSDRD RFTS FW+GLQ A+GTRL
Sbjct: 601  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRL 660

Query: 841  DFSTAFHPQTDGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPF 900
            DFSTAFHPQTDGQTERLNQ+LEDMLRAC L+F  SWDS LHLMEF+YNNS+QATIGMAPF
Sbjct: 661  DFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPF 720

Query: 901  EALYGKRCRSPLRWDKVGERELVGPELVRLTNEAVQKIRARMRTAQSRQKSYADVRRKSL 960
            EALYG+ CRSP+ W +VGE+ L+GPELV+ TNEA+QKIR+RM TAQSRQKSYADVRRK L
Sbjct: 721  EALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL 780

Query: 961  EFEVGDPVFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGLVVYKLALPPALSGVHDV 1020
            EFEVGD VFLKVAPMKGVLRF  +GKLSP+F+GPFEILER+G V Y+LALPP+LS VHDV
Sbjct: 781  EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDV 840

Query: 1021 FHVSMLRKYITDPIHVIDYKPLQLNEDLSYEEKPVRILAREVKTLRNRSIAFVKELLGRK 1048
            FHVSMLRKY+ DP HV+DY+PL+++E+LSY E+PV +LAR VKTLRN+ I  VK +L R 
Sbjct: 841  FHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLARGVKTLRNKQIPLVK-VLWRN 900

[Close]
BLAST of CmoCh11G012340 vs. TrEMBL
Match: M5WLY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1)

HSP 1 Score: 1162.1 bits (3005), Expect = 0.0e+00
Identity = 594/1060 (56.04%), Postives = 753/1060 (71.04%), Query Frame = 1 

Query: 38   QVIIGNQTLSIDLMVVNMTDFDAILGMDWLAENRASIDCRKKEVKFSPSTGPTFKFKGTN 97
            + ++GN  L  DL+ + M D D ILGMDWLA +RAS+DC +KEV F     P   F G  
Sbjct: 130  RTLVGNVFLEADLIPLGMVDLDVILGMDWLARHRASVDCFRKEVVFHSLGQPEVTFYGER 189

Query: 98   IGITPKVVSMMKAKRLVQQGGWAILACVVDVRGKEKTLVNVPIVNEFPNVFPDDLSGISP 157
              +   ++S M AKRL+++G    +A V+D R     L ++P++ +FP+VFP+DL G+ P
Sbjct: 190  RVLPSCLISAMTAKRLLRKGCSGYIAHVIDTRDNGLRLEDIPVIQDFPDVFPEDLPGLPP 249

Query: 158  SRAVDFVIELEPRTGPISKAPYRMAPAELKELKAQLQDLLDKGFIQPSVSPWGAPVLFVK 217
             R ++FVIEL P T PIS+APYRMAPAEL+ELK QLQ+L+DKGFI+PS SPWGAPVLFVK
Sbjct: 250  HREIEFVIELAPGTNPISQAPYRMAPAELRELKTQLQELVDKGFIRPSFSPWGAPVLFVK 309

Query: 218  KKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLREATIFSKIDLRSGYHQIRINEKD 277
            KKDG+MRLC+DYR+LNK TV+N+YPLPRI+DLFDQL+ A +FSKIDLRSGYHQ+R+ E+D
Sbjct: 310  KKDGTMRLCVDYRQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREED 369

Query: 278  VPKTAFRTRYGHYEFVVMSFGLTNAPTVFMELMNRVFKECLDMFVIVFIDDILIYSRTDL 337
            +PKTAFRTRYGHYEF+VM FGLTNAP  FM+LMNRVF+  LD FVIVFIDDIL+YS++  
Sbjct: 370  MPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRRYLDRFVIVFIDDILVYSKSQK 429

Query: 338  EHEEHLRKVLTTLREHKLYAKFSKCEFWLRQV---------------------------- 397
             H +HL  VL TLR  +LYAKFSKC+FWL +V                            
Sbjct: 430  AHMKHLNLVLRTLRRRQLYAKFSKCQFWLDRVSFLGHVISAEGIYVDPQKIEAVVNWLRP 489

Query: 398  -------SFLG----HMVSKDEISVDPTKVEAIT----------KWERPTTNLKERLVTT 457
                   SFLG    +    +  S     +  +T          K E     LK RL T 
Sbjct: 490  TSVTEIRSFLGLAGYYRRFVEGFSTIAAPLTYLTRKGVKFVWSDKCEESFIELKTRLTTA 549

Query: 458  PVLIVLESSEGYEIYSDASMKGLGCVLMQHGKVVAYASRQLKEYEKNYPTHDLELAAVVF 517
            PVL + + S  + IYSDAS +GLGCVLMQHG+V+AYASRQLK++E NYP HDLELAAVVF
Sbjct: 550  PVLALPDDSGNFVIYSDASQQGLGCVLMQHGRVIAYASRQLKKHELNYPVHDLELAAVVF 609

Query: 518  ALKIWRHYLYGEKTQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDVDIQYHLGKANVV 577
            ALKIWRHYLYGE  QIFTDHKSLKY FTQKELN+RQRRWLEL+KDYD  I++H G+ANVV
Sbjct: 610  ALKIWRHYLYGETCQIFTDHKSLKYLFTQKELNLRQRRWLELIKDYDCTIEHHPGRANVV 669

Query: 578  ADALSRKTVHSSALIT-REVRVQREFERANIAVATEGVVAQLARLTVQPTLRQRIITSQR 637
            ADALSRK+  S A +  R + +  E  +  I +  +   A LA L V+P L +RI+ +Q 
Sbjct: 670  ADALSRKSSGSIAYLRGRYLPLMVEMRKLRIGLDVDNQGALLATLHVRPVLVERILAAQS 729

Query: 638  EDPNLQKVLGQLDESPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFFMHPR 697
            +DP +  +  ++        S  +D  L+   RL VP  E L++EIL EAH S F MHP 
Sbjct: 730  QDPLICTLRVEVANGDRTDCSVRNDGALMVGNRLYVPNDEALKREILEEAHESAFAMHPG 789

Query: 698  GTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAM 757
             TKMY  L++H+WW  MK+ +A +V +CL+CQQVKA RQK +GLLQPL IPEWKWE I M
Sbjct: 790  STKMYHTLREHYWWPFMKKQIAEYVRRCLICQQVKAERQKPSGLLQPLPIPEWKWERITM 849

Query: 758  DFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIV 817
            DF+  LP+T   +  +WV+VDRLTKSAHFLP +  Y+++  A++++ EIVRLHGVPVSIV
Sbjct: 850  DFVFKLPQTQSKHDGVWVIVDRLTKSAHFLPVRANYSLNKLAKIFIDEIVRLHGVPVSIV 909

Query: 818  SDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLDFKESWD 877
            SDRDPRFTS FW  L +A GT+L FSTAFHPQTDGQ+ER  Q LE MLRAC L F+  WD
Sbjct: 910  SDRDPRFTSRFWTKLNEAFGTQLQFSTAFHPQTDGQSERTIQTLEHMLRACALQFRGDWD 969

Query: 878  SKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLRWDKVGERELVGPELVRLTNEAVQK 937
             KL LMEF+YNNS+Q +IGM+PF+ALYG++CR+P  WD+VGE  LV  E V LT + VQ 
Sbjct: 970  EKLPLMEFAYNNSYQVSIGMSPFDALYGRQCRTPFYWDEVGEHRLVVSEDVELTKKQVQI 1029

Query: 938  IRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRFGHKGKLSPKFIGPFEI 997
            IR R++TAQ RQKSYAD RRK L+FEVGD VFLK++P KGV+RFG +GKLSP++IGP+EI
Sbjct: 1030 IRERLKTAQDRQKSYADNRRKDLQFEVGDWVFLKLSPWKGVVRFGKRGKLSPRYIGPYEI 1089

Query: 998  LERVGLVVYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYKPLQLNEDLSYEEKPVRI 1048
            +E VG V Y+L LP  L+ +HDVFHVSMLRKYI+DP HV++ +P++L  D +Y E+PV+I
Sbjct: 1090 IECVGPVAYRLTLPSDLARLHDVFHVSMLRKYISDPSHVLEEQPVELEADFTYVEQPVQI 1149

[Close]
BLAST of CmoCh11G012340 vs. TrEMBL
Match: M5Y103_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016115mg PE=4 SV=1)

HSP 1 Score: 1131.3 bits (2925), Expect = 0.0e+00
Identity = 582/1041 (55.91%), Postives = 736/1041 (70.70%), Query Frame = 1 

Query: 46   LSIDLMVVNMTDFDAILGMDWLAENRASIDCRKKEVKFSPSTGPTFKFKGTNIGITPKVV 105
            +S DL+ + M D D ILGMDWLA +RAS+DC + EV F     P   F G          
Sbjct: 258  ISADLIPLGMVDLDVILGMDWLARHRASVDCFRNEVVFRSPGRPKVTFYG---------- 317

Query: 106  SMMKAKRLVQQGGWAILACVVDVRGKEKTLVNVPIVNEFPNVFPDDLSGISPSRAVDFVI 165
              M AKRL+++G  + +A V+D R     L ++ +V +FP+VFP+DL G+   R ++FVI
Sbjct: 318  EPMTAKRLLRKGCSSYIAYVIDTRDNGLRLEDIRVVQDFPDVFPEDLPGLPHHREIEFVI 377

Query: 166  ELEPRTGPISKAPYRMAPAELKELKAQLQDLLDKGFIQPSVSPWGAPVLFVKKKDGSMRL 225
            EL P T PIS+APYRMAPAEL+ELK QLQ+L+DKGFI+ S SPWGAPVLFVKKKDG+MRL
Sbjct: 378  ELAPGTNPISQAPYRMAPAELRELKIQLQELVDKGFIRLSFSPWGAPVLFVKKKDGTMRL 437

Query: 226  CIDYRELNKRTVKNKYPLPRIEDLFDQLREATIFSKIDLRSGYHQIRINEKDVPKTAFRT 285
            CIDYR+LNK TV+N+YPLPRI+DLFDQL+ A +FSKIDLRSGYHQ+R+ E+DV KTAFRT
Sbjct: 438  CIDYRQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREEDVTKTAFRT 497

Query: 286  RYGHYEFVVMSFGLTNAPTVFMELMNRVFKECLDMFVIVFIDDILIYSRTDLEHEEHLRK 345
            RYGHYEF+VM FGLTNAP  FM+LMNRVF+  LD FVIVF+DDIL+YS++   H +HL  
Sbjct: 498  RYGHYEFLVMPFGLTNAPAAFMDLMNRVFRRYLDRFVIVFVDDILVYSKSQKAHMKHLNL 557

Query: 346  VLTTLREHKLYAKFSKCEFWLRQVSFLGHMVSKDEISVDPTKVEAITKWER--------- 405
            VL TLR  +LYAKFSKC+FWL  VSFLGH++S + I VDP K+EA+  W R         
Sbjct: 558  VLRTLRRRQLYAKFSKCQFWLDIVSFLGHVISAEGIYVDPQKIEAVVNWLRPTSVTEIRS 617

Query: 406  --------------------PTTNLKERLV----------TTPVLIVLESSEGYEIYSDA 465
                                P T L  + V          T P     + S  + IYSDA
Sbjct: 618  FLGLARYYRRFVEGFSTIAAPLTYLTRKGVKFVWSDKCEETFP-----DDSGNFVIYSDA 677

Query: 466  SMKGLGCVLMQHGKVVAYASRQLKEYEKNYPTHDLELAAVVFALKIWRHYLYGEKTQIFT 525
            S +GLGCVLMQHG+V+AYASRQLK++E NYP HDLELAAVVFALKIWRHYLYGE  QIFT
Sbjct: 678  SQQGLGCVLMQHGRVIAYASRQLKKHELNYPVHDLELAAVVFALKIWRHYLYGETCQIFT 737

Query: 526  DHKSLKYFFTQKELNMRQRRWLELVKDYDVDIQYHLGKANVVADALSRKTVHSSALITRE 585
             HKSLKY FTQKELN+RQRRWLEL+KDYD  I++H G+ANVVADAL  + +         
Sbjct: 738  YHKSLKYLFTQKELNLRQRRWLELIKDYDCTIEHHPGRANVVADALKMRKL--------- 797

Query: 586  VRVQREFERANIAVATEGVVAQLARLTVQPTLRQRIITSQREDPNLQKVLGQLDESPVDG 645
                    R  + V  +G  A LA L V+P L +RI+ +Q +DP +  +  ++       
Sbjct: 798  --------RVGLDVDNQG--ALLATLHVRPVLVERILAAQSQDPLICTLRVEVANGDRTD 857

Query: 646  FSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFFMHPRGTKMYQDLKQHFWWKSMKR 705
             S  +D  L+   +L VP  E L++EIL EAH S F MHP  TKMY  L++H+WW  MK+
Sbjct: 858  CSVRNDGALMVGNKLYVPNDEALKREILEEAHESAFAMHPGSTKMYHTLREHYWWPFMKK 917

Query: 706  DVAGFVSKCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAMDFIVGLPKTPKGYTVIWVV 765
            ++A +V +CL+CQQVKA RQK +GLLQPL IPEWKWE I MDF+  LP+T   +  +WV+
Sbjct: 918  EIAEYVRRCLICQQVKAERQKPSGLLQPLPIPEWKWERITMDFVFKLPRTQSKHDGVWVI 977

Query: 766  VDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIVSDRDPRFTSAFWRGLQKAL 825
            VDRLTKSA+FLP +  Y+++  A+L++ EIVRLH VP+SIVSDRDPRFTS FW  L +A 
Sbjct: 978  VDRLTKSAYFLPVRANYSLNKLAKLFIDEIVRLHRVPISIVSDRDPRFTSRFWTKLNEAF 1037

Query: 826  GTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIG 885
            GT+L FSTAFH QTDGQ+ER  Q LE+MLRAC L F+  WD KL LMEF+YNNS+Q +IG
Sbjct: 1038 GTQLQFSTAFHSQTDGQSERTIQTLENMLRACALQFRGDWDEKLPLMEFAYNNSYQVSIG 1097

Query: 886  MAPFEALYGKRCRSPLRWDKVGERELVGPELVRLTNEAVQKIRARMRTAQSRQKSYADVR 945
            M+PF ALYG++CR+P  WD+VGE  LV  E V LT + VQ IR R++TAQ RQKSYAD R
Sbjct: 1098 MSPFNALYGRQCRTPFYWDEVGEHRLVVSEDVELTKKQVQIIRERLKTAQDRQKSYADNR 1157

Query: 946  RKSLEFEVGDPVFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGLVVYKLALPPALSG 1005
            RK L+FEV D VFLK++P KGV+RFG +GKLS ++IGP+EI+ERVG V Y+LALP  L+ 
Sbjct: 1158 RKDLQFEVRDWVFLKLSPWKGVVRFGKQGKLSSRYIGPYEIIERVGPVAYRLALPSDLAR 1217

Query: 1006 VHDVFHVSMLRKYITDPIHVIDYKPLQLNEDLSYEEKPVRILAREVKTLRNRSIAFVKEL 1048
            +HDVFH+SMLRKYI+DP HV++ +P++L  D +Y E+PV+IL  + + LR+R I  VK +
Sbjct: 1218 LHDVFHISMLRKYISDPSHVLEEQPVELEADFTYVEQPVQILDWKTQVLRSREIPLVK-V 1263

[Close]
BLAST of CmoCh11G012340 vs. TrEMBL
Match: E5GCE2_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 1125.5 bits (2910), Expect = 0.0e+00
Identity = 602/1084 (55.54%), Postives = 740/1084 (68.27%), Query Frame = 1 

Query: 3    FVVQAGFELEPLLHEMSVSTPAGVDLVSRDRVKDGQVIIGNQTLSIDLMVVNMTDFDAIL 62
            FV+ A  E+EPL H +SVSTP G  ++S+++VK  Q+ I    + + L+V++M DFD IL
Sbjct: 310  FVLHARLEVEPLHHVLSVSTPFGECMLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVIL 369

Query: 63   GMDWLAENRASIDCRKKEVKFSPSTGPTFKFKGTNIGITPKVVSMMKAKRLVQQGGWAIL 122
            GMDWLA N ASIDC +KE+ F+P +   FKFK       PKV+S M+A +L+ QG W+IL
Sbjct: 370  GMDWLAANHASIDCSRKEIAFNPPSMANFKFKEEGSRSLPKVISAMRASKLLSQGIWSIL 429

Query: 123  ACVVDVRGKEKTLVNVPIVNEFPNVFPDDLSGISPSRAVDFVIELEPRTGPISKAPYRMA 182
            A VVD R  + +L + P+V ++P+VFP++L G+ P R ++F IELE  T PIS+APYRMA
Sbjct: 430  ASVVDTREVDVSLSSKPMVRDYPDVFPEELPGLPPHREIEFAIELELGTVPISRAPYRMA 489

Query: 183  PAELKELKAQLQDLLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYP 242
            PAELKELK                           KKD SMRLCIDYRELNK TVKN+YP
Sbjct: 490  PAELKELK---------------------------KKDRSMRLCIDYRELNKVTVKNRYP 549

Query: 243  LPRIEDLFDQLREATIFSKIDLRSGYHQIRINEKDVPKTAFRTRYGHYEFVVMSFGLTNA 302
            LP+I+DLFDQL+ AT+FSKIDLRSGYHQ+RI ++DVPKTAF +RYGHYEF+VMSF LTNA
Sbjct: 550  LPKIDDLFDQLQGATLFSKIDLRSGYHQLRIKDRDVPKTAFHSRYGHYEFIVMSFALTNA 609

Query: 303  PTVFMELMNRVFKECLDMFVIVFIDDILIYSRTDLEHEEHLRKVLTTLREHKLYAKFSKC 362
            P+VFM+LMNRVF+E LD FVIVFI+DILIYS+ + EHEEHLR VL TL+++KLYAKF KC
Sbjct: 610  PSVFMDLMNRVFREFLDTFVIVFINDILIYSKIEAEHEEHLRMVLQTLQDNKLYAKFLKC 669

Query: 363  EFWLRQVSFLGHMVSKDEISVDPTKVEAITKWERPTT----------NLKERLVTTPVLI 422
            EFWL+QVSFLGH+VSK  +SVD  K+EA+T W RP+T          NLK++LVTTPVL 
Sbjct: 670  EFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVSEACEDSFQNLKQKLVTTPVLT 729

Query: 423  VLESSEGYEIYSDASMKGLGCVLMQHGKVVAYASRQLKEYEKNYPTHDLELAAVVFALKI 482
            V + S  + IYSDAS KG GCVLMQ GKVVAYASRQLK +E+NYPTHDLELAAVVFALKI
Sbjct: 730  VPDGSGSFVIYSDASKKGFGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 789

Query: 483  WRHYLYGEKTQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDVDIQYHLGKANVVADAL 542
            WRHYLYG+K QIFT HK+                           ++Y   +  +  +  
Sbjct: 790  WRHYLYGQKIQIFTYHKN---------------------------LKYFFTQKEL--NMR 849

Query: 543  SRKTVHSSALITREVRVQREFERANIAVATEGVVAQLARLTVQPTLRQRIITSQREDPNL 602
             R+ +     + ++   +  +      V  + +  +LA+LTVQPTLRQ+II +Q  +P L
Sbjct: 850  QRRWLE----LVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTLRQKIIDAQSNNPYL 909

Query: 603  QKVLGQLDESPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFFMHPRGTKMY 662
                G  +      FS SSD GLL++ RL VP+   ++ E+L EAH+SPF MH   TKMY
Sbjct: 910  VGKRGLAETGQAVEFSISSDGGLLFERRLYVPSDSAVKTELLSEAHSSPFSMHSGSTKMY 969

Query: 663  QDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAMDFIVG 722
            Q LK+ +WW ++KR+VA FVSKCLVCQQVKAPRQK  GLLQPLS+P+WKWEN++MDFI G
Sbjct: 970  QHLKRVYWWSNIKREVAEFVSKCLVCQQVKAPRQKPTGLLQPLSVPKWKWENVSMDFITG 1029

Query: 723  LPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIVSDRDP 782
            LP+T +G+TVIWVVVDRLTKSAHF+ GK TYT   WAQLY+ EIVRLHGVPVSIVS+RD 
Sbjct: 1030 LPRTLRGFTVIWVVVDRLTKSAHFIQGKSTYTASKWAQLYMSEIVRLHGVPVSIVSNRDA 1089

Query: 783  RFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLDFKESWDSKLHL 842
            RFTS F +GLQ A+GTRLDFST FHPQTD QTERLNQ+LEDMLRA  L F  SWDS LHL
Sbjct: 1090 RFTSKFLKGLQAAMGTRLDFSTTFHPQTDCQTERLNQVLEDMLRAYALGFPGSWDSHLHL 1149

Query: 843  MEFSYNNSFQATIGMAPFEALYGKRCRSPLRWDKVGERELVGPELVRLTNEAVQKIRARM 902
            MEF+YNNSFQATI MAPFEALY KRCRSPL W                            
Sbjct: 1150 MEFAYNNSFQATIDMAPFEALYSKRCRSPLCW---------------------------- 1209

Query: 903  RTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVG 962
               +SRQKSYADVR K LEF+VGD VFLKVAPMKGVLRF   GKLSP+F+ PFEILER+G
Sbjct: 1210 --GESRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERSGKLSPRFVRPFEILERIG 1269

Query: 963  LVVYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYKPLQLNEDLSYEEKPVRILAREV 1022
             V Y+LALPP+LS VHDVFHVSMLRKY+ D                SY    VR+ A  +
Sbjct: 1270 PVAYRLALPPSLSAVHDVFHVSMLRKYMPDS---------------SYRRPAVRVYACYI 1288

Query: 1023 KTLRNRSIAFV-KELLGRKTPRKKRTKNKEEKGRKRTEIGNENAAGRREKARRKIGQSRP 1076
            + +  R+ + V      RK+  + RT+   E   + + I +  A    + +R     S  
Sbjct: 1330 ERVELRATSRVASREPSRKSSHELRTEPSRESRAESSRIESSRAEPPSKPSRTPCSPSHL 1288

[Close]
BLAST of CmoCh11G012340 vs. TrEMBL
Match: A5BA10_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009489 PE=4 SV=1)

HSP 1 Score: 1122.8 bits (2903), Expect = 0.0e+00
Identity = 582/1018 (57.17%), Postives = 729/1018 (71.61%), Query Frame = 1 

Query: 46   LSIDLMVVNMTDFDAILGMDWLAENRASIDCRKKEVKFSPSTGPTFKFKGTNIGITPKVV 105
            + +DL+++++ DFD ILGMDWLA   AS++C +K V FS    P F F+  ++     ++
Sbjct: 1    MPVDLVLLDLQDFDVILGMDWLASYHASVNCFEKRVTFSIPGQPKFSFERKHVDRPLCMI 60

Query: 106  SMMKAKRLVQQGGWAILACVVDVRGKEKTLVNVPIVNEFPNVFPDDLSGISPSRAVDFVI 165
            S ++A  L+++G    LA V+      K L ++PIV E+P+VFP+DL G+ P R V+F I
Sbjct: 61   SALRASSLLKKGCQGFLASVMSNESDLK-LEDIPIVREYPDVFPEDLPGLPPEREVEFTI 120

Query: 166  ELEPRTGPISKAPYRMAPAELKELKAQLQDLLDKGFIQPSVSPWGAPVLFVKKKDGSMRL 225
            +L P TGP+SKAPYRMAP ELKELK                   GAP+LFVKKKDGSMRL
Sbjct: 121  DLVPGTGPMSKAPYRMAPVELKELK-------------------GAPILFVKKKDGSMRL 180

Query: 226  CIDYRELNKRTVKNKYPLPRIEDLFDQLREATIFSKIDLRSGYHQIRINEKDVPKTAFRT 285
            CIDYRELNK  V+NKYPL RI+DLFDQL+ A +FSKIDL+SGYHQ+ +  +DVPKTAFRT
Sbjct: 181  CIDYRELNKVIVRNKYPLSRIDDLFDQLQGACVFSKIDLQSGYHQLMVRSEDVPKTAFRT 240

Query: 286  RYGHYEFVVMSFGLTNAPTVFMELMNRVFKECLDMFVIVFIDDILIYSRTDLEHEEHLRK 345
            RYGHYEF+VM FGLTNAP  FM+LMNRVFK  LD FV VFIDDILIYSR+  EHE HL  
Sbjct: 241  RYGHYEFLVMPFGLTNAPAAFMDLMNRVFKPYLDQFVAVFIDDILIYSRSREEHEGHLSI 300

Query: 346  VLTTLREHKLYAKFSKCEFWLRQVSFLGHMVSKDEISVDPTKVEAITKWERPTTNLKERL 405
            VL TLR+ +LYAK  KCEFW     F   ++   +++    K E     E     LK RL
Sbjct: 301  VLQTLRDKQLYAKLKKCEFWRFIEGFSKIVLPLTKLTQKGVKFEWSDDCECSFQELKNRL 360

Query: 406  VTTPVLIVLESSEGYEIYSDASMKGLGCVLMQHGKVVAYASRQLKEYEKNYPTHDLELAA 465
            V+ P+L +   S G+ +YSDAS +GLGCVLMQHG+VVAYASRQLK YE+NYPTHD ELA 
Sbjct: 361  VSAPILTIPSGSGGFVVYSDASHQGLGCVLMQHGRVVAYASRQLKPYERNYPTHDSELAD 420

Query: 466  VVFALKIWRHYLYGEKTQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDVDIQYHLGKA 525
            VVFALKIWRH+L+GE  +IFTDHKSLKY F+QK+LNMRQRRW+EL+KDYD  IQYH  KA
Sbjct: 421  VVFALKIWRHFLFGETCEIFTDHKSLKYLFSQKKLNMRQRRWIELLKDYDYIIQYHSRKA 480

Query: 526  NVVADALSRKTVHSSALIT---REVRVQREFERANIAVATEGVVAQLARLTVQPTLRQRI 585
            NVVADALSRK+V S   I    R++       + ++ V   G  A +A   VQP L  RI
Sbjct: 481  NVVADALSRKSVGSLTAIRGCQRQLLEDLRSLQVHMRVLDSG--ALIANFRVQPDLVGRI 540

Query: 586  ITSQREDPNLQKVLGQLDESPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPF 645
               Q+ D NL +++ ++ +     F  S D  L +  RLCVP  EDLR+E+L EAH S F
Sbjct: 541  KALQKNDLNLVQLMEEVKKGSKLDFVLSDDGILRFGTRLCVPNDEDLRRELLEEAHCSKF 600

Query: 646  FMHPRGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKAAGLLQPLSIPEWKW 705
             +HP  TKMY+DL+Q++WW  MK D+A FV++CLVCQQ             PL+IPEWKW
Sbjct: 601  AIHPERTKMYKDLRQNYWWSGMKCDIAQFVAQCLVCQQ-------------PLAIPEWKW 660

Query: 706  ENIAMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGV 765
            E+I MDF++GLP+T  G   IWV+VDRLTKSAHFLP KV +++D  A LYVKEIVR+HGV
Sbjct: 661  EHITMDFVIGLPRTLGGNNAIWVIVDRLTKSAHFLPMKVNFSLDRLASLYVKEIVRMHGV 720

Query: 766  PVSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLDF 825
            PVSIVSDRDPRFTS FW  LQK+LGT+L FSTAFHPQTDGQ+ER+ Q+LED+ RAC+LD 
Sbjct: 721  PVSIVSDRDPRFTSRFWHSLQKSLGTKLSFSTAFHPQTDGQSERVIQVLEDLFRACILDL 780

Query: 826  KESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLRWDKVGERELVGPELVRLTN 885
            + +WD  L L+EF+YNNSFQA+IGMAPFEALYG++CRSP+ W+ VGER+L+GPELV+LT 
Sbjct: 781  QGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKCRSPICWNDVGERKLLGPELVQLTV 840

Query: 886  EAVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRFGHKGKLSPKFI 945
            E V  I+ R++ AQSR KSY D RR+ LEFEVGD VFLKV+PMK V+RFG KGKLSP+F+
Sbjct: 841  EKVALIKERLKAAQSRHKSYVDHRRRDLEFEVGDHVFLKVSPMKSVMRFGRKGKLSPRFV 900

Query: 946  GPFEILERVGLVVYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYKPLQLNEDLSYEE 1005
            G FEILERVG + YK+ALPP+LS VH+VFHVS LRKYI DP HV+D +P+Q+ EDL+YEE
Sbjct: 901  GLFEILERVGTLAYKVALPPSLSKVHNVFHVSTLRKYIYDPSHVVDLEPIQIFEDLTYEE 960

Query: 1006 KPVRILAREVKTLRNRSIAFVKELLGRKTPRKKRTKNKEEKGRKRTEIGNENAAGRRE 1061
             PV+I+    K LR+  +  VK      + R+   + +EE   K  ++  ++     E
Sbjct: 961  VPVQIVDMMDKVLRHAVVKLVKVQWSNHSIREATWELEEEMREKHPQLFQDSGMSSLE 983

[Close]
BLAST of CmoCh11G012340 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 51.2 bits (121), Expect = 5.5e-06
Identity = 26/65 (40.00%), Postives = 38/65 (58.46%), Query Frame = 1 

Query: 342 HLRKVLTTLREHKLYAKFSKCEFWLRQVSFLGH--MVSKDEISVDPTKVEAITKWERP-- 401
           HL  VL    +H+ YA   KC F   Q+++LGH  ++S + +S DP K+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 402 TTNLK 403
           TT L+
Sbjct: 63  TTELR 67

[Close]
BLAST of CmoCh11G012340 vs. NCBI nr
Match: gi|28558781|gb|AAO45752.1| (pol protein [Cucumis melo subsp. melo])

HSP 1 Score: 1196.8 bits (3095), Expect = 0.0e+00
Identity = 623/917 (67.94%), Postives = 715/917 (77.97%), Query Frame = 1 

Query: 181  MAPAELKELKAQLQDLLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNK 240
            MAPAELKELK QLQ+LLDKGFI+PSVSPWGAPVLFVKKKDGSMRLCIDYRELNK TVKN+
Sbjct: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60

Query: 241  YPLPRIEDLFDQLREATIFSKIDLRSGYHQIRINEKDVPKTAFRTRYGHYEFVVMSFGLT 300
            YPLPRI+DLFDQL+ AT+FSKIDLRSGYHQ+RI ++DVPKTAFR+RYGHY+F+VMSFGLT
Sbjct: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLT 120

Query: 301  NAPTVFMELMNRVFKECLDMFVIVFIDDILIYSRTDLEHEEHLRKVLTTL---------- 360
            NAP VFM+LMNRVF+E LD FVIVFIDDILIYS+T+ EHEEHLR VL TL          
Sbjct: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180

Query: 361  -------------------REHKLYAKFSKCEFWLRQV------SFLG----HMVSKDEI 420
                                     AK      W R        SFLG    +    +  
Sbjct: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 240

Query: 421  SVDPTKVEAITK------WERPTTN----LKERLVTTPVLIVLESSEGYEIYSDASMKGL 480
            S   T +  +T+      W +   +    LK++LVT PVL V + S  + IYSDAS KGL
Sbjct: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300

Query: 481  GCVLMQHGKVVAYASRQLKEYEKNYPTHDLELAAVVFALKIWRHYLYGEKTQIFTDHKSL 540
            GCVLMQ GKVVAYASRQLK +E+NYPTHDLELAAVVFALKIWRHYLYGEK QIFTDHKSL
Sbjct: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360

Query: 541  KYFFTQKELNMRQRRWLELVKDYDVDIQYHLGKANVVADALSRKTVHSSALITREVRVQR 600
            KYFFTQKELNMRQRRWLELVKDYD +I YH GKANVVADALSRK  HS+ALITR+  + R
Sbjct: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420

Query: 601  EFERANIAVATEGVVAQLARLTVQPTLRQRIITSQREDPNLQKVLGQLDESPVDGFSKSS 660
            + ERA IAV    V  QLA+LTVQPTLRQRII +Q  DP L +  G  +      FS SS
Sbjct: 421  DLERAEIAVLVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480

Query: 661  DEGLLYQGRLCVPAIEDLRKEILMEAHNSPFFMHPRGTKMYQDLKQHF-WWKSMKRDVAG 720
            D GLL++ RLCVP+   ++ E+L EAH+SPF MHP  T+     +  F   ++MKR+VA 
Sbjct: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTEDVSGPEAGFIGGRNMKREVAE 540

Query: 721  FVSKCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAMDFIVGLPKTPKGYTVIWVVVDRL 780
            FVSKCLVCQQVKAPRQK AGLLQPLSIPEWKWEN++MDFI GLP+T +G+TVIWVVVDRL
Sbjct: 541  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRL 600

Query: 781  TKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIVSDRDPRFTSAFWRGLQKALGTRL 840
            TKSAHF+PGK TYT   WAQLY+ EIVRLHGVPVSIVSDRD RFTS FW+GLQ A+GTRL
Sbjct: 601  TKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRL 660

Query: 841  DFSTAFHPQTDGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIGMAPF 900
            DFSTAFHPQTDGQTERLNQ+LEDMLRAC L+F  SWDS LHLMEF+YNNS+QATIGMAPF
Sbjct: 661  DFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPF 720

Query: 901  EALYGKRCRSPLRWDKVGERELVGPELVRLTNEAVQKIRARMRTAQSRQKSYADVRRKSL 960
            EALYG+ CRSP+ W +VGE+ L+GPELV+ TNEA+QKIR+RM TAQSRQKSYADVRRK L
Sbjct: 721  EALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL 780

Query: 961  EFEVGDPVFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGLVVYKLALPPALSGVHDV 1020
            EFEVGD VFLKVAPMKGVLRF  +GKLSP+F+GPFEILER+G V Y+LALPP+LS VHDV
Sbjct: 781  EFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDV 840

Query: 1021 FHVSMLRKYITDPIHVIDYKPLQLNEDLSYEEKPVRILAREVKTLRNRSIAFVKELLGRK 1048
            FHVSMLRKY+ DP HV+DY+PL+++E+LSY E+PV +LAR VKTLRN+ I  VK +L R 
Sbjct: 841  FHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLARGVKTLRNKQIPLVK-VLWRN 900

[Close]
BLAST of CmoCh11G012340 vs. NCBI nr
Match: gi|595885005|ref|XP_007213082.1| (hypothetical protein PRUPE_ppa021229mg [Prunus persica])

HSP 1 Score: 1162.1 bits (3005), Expect = 0.0e+00
Identity = 594/1060 (56.04%), Postives = 753/1060 (71.04%), Query Frame = 1 

Query: 38   QVIIGNQTLSIDLMVVNMTDFDAILGMDWLAENRASIDCRKKEVKFSPSTGPTFKFKGTN 97
            + ++GN  L  DL+ + M D D ILGMDWLA +RAS+DC +KEV F     P   F G  
Sbjct: 130  RTLVGNVFLEADLIPLGMVDLDVILGMDWLARHRASVDCFRKEVVFHSLGQPEVTFYGER 189

Query: 98   IGITPKVVSMMKAKRLVQQGGWAILACVVDVRGKEKTLVNVPIVNEFPNVFPDDLSGISP 157
              +   ++S M AKRL+++G    +A V+D R     L ++P++ +FP+VFP+DL G+ P
Sbjct: 190  RVLPSCLISAMTAKRLLRKGCSGYIAHVIDTRDNGLRLEDIPVIQDFPDVFPEDLPGLPP 249

Query: 158  SRAVDFVIELEPRTGPISKAPYRMAPAELKELKAQLQDLLDKGFIQPSVSPWGAPVLFVK 217
             R ++FVIEL P T PIS+APYRMAPAEL+ELK QLQ+L+DKGFI+PS SPWGAPVLFVK
Sbjct: 250  HREIEFVIELAPGTNPISQAPYRMAPAELRELKTQLQELVDKGFIRPSFSPWGAPVLFVK 309

Query: 218  KKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLREATIFSKIDLRSGYHQIRINEKD 277
            KKDG+MRLC+DYR+LNK TV+N+YPLPRI+DLFDQL+ A +FSKIDLRSGYHQ+R+ E+D
Sbjct: 310  KKDGTMRLCVDYRQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREED 369

Query: 278  VPKTAFRTRYGHYEFVVMSFGLTNAPTVFMELMNRVFKECLDMFVIVFIDDILIYSRTDL 337
            +PKTAFRTRYGHYEF+VM FGLTNAP  FM+LMNRVF+  LD FVIVFIDDIL+YS++  
Sbjct: 370  MPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRRYLDRFVIVFIDDILVYSKSQK 429

Query: 338  EHEEHLRKVLTTLREHKLYAKFSKCEFWLRQV---------------------------- 397
             H +HL  VL TLR  +LYAKFSKC+FWL +V                            
Sbjct: 430  AHMKHLNLVLRTLRRRQLYAKFSKCQFWLDRVSFLGHVISAEGIYVDPQKIEAVVNWLRP 489

Query: 398  -------SFLG----HMVSKDEISVDPTKVEAIT----------KWERPTTNLKERLVTT 457
                   SFLG    +    +  S     +  +T          K E     LK RL T 
Sbjct: 490  TSVTEIRSFLGLAGYYRRFVEGFSTIAAPLTYLTRKGVKFVWSDKCEESFIELKTRLTTA 549

Query: 458  PVLIVLESSEGYEIYSDASMKGLGCVLMQHGKVVAYASRQLKEYEKNYPTHDLELAAVVF 517
            PVL + + S  + IYSDAS +GLGCVLMQHG+V+AYASRQLK++E NYP HDLELAAVVF
Sbjct: 550  PVLALPDDSGNFVIYSDASQQGLGCVLMQHGRVIAYASRQLKKHELNYPVHDLELAAVVF 609

Query: 518  ALKIWRHYLYGEKTQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDVDIQYHLGKANVV 577
            ALKIWRHYLYGE  QIFTDHKSLKY FTQKELN+RQRRWLEL+KDYD  I++H G+ANVV
Sbjct: 610  ALKIWRHYLYGETCQIFTDHKSLKYLFTQKELNLRQRRWLELIKDYDCTIEHHPGRANVV 669

Query: 578  ADALSRKTVHSSALIT-REVRVQREFERANIAVATEGVVAQLARLTVQPTLRQRIITSQR 637
            ADALSRK+  S A +  R + +  E  +  I +  +   A LA L V+P L +RI+ +Q 
Sbjct: 670  ADALSRKSSGSIAYLRGRYLPLMVEMRKLRIGLDVDNQGALLATLHVRPVLVERILAAQS 729

Query: 638  EDPNLQKVLGQLDESPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFFMHPR 697
            +DP +  +  ++        S  +D  L+   RL VP  E L++EIL EAH S F MHP 
Sbjct: 730  QDPLICTLRVEVANGDRTDCSVRNDGALMVGNRLYVPNDEALKREILEEAHESAFAMHPG 789

Query: 698  GTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAM 757
             TKMY  L++H+WW  MK+ +A +V +CL+CQQVKA RQK +GLLQPL IPEWKWE I M
Sbjct: 790  STKMYHTLREHYWWPFMKKQIAEYVRRCLICQQVKAERQKPSGLLQPLPIPEWKWERITM 849

Query: 758  DFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIV 817
            DF+  LP+T   +  +WV+VDRLTKSAHFLP +  Y+++  A++++ EIVRLHGVPVSIV
Sbjct: 850  DFVFKLPQTQSKHDGVWVIVDRLTKSAHFLPVRANYSLNKLAKIFIDEIVRLHGVPVSIV 909

Query: 818  SDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLDFKESWD 877
            SDRDPRFTS FW  L +A GT+L FSTAFHPQTDGQ+ER  Q LE MLRAC L F+  WD
Sbjct: 910  SDRDPRFTSRFWTKLNEAFGTQLQFSTAFHPQTDGQSERTIQTLEHMLRACALQFRGDWD 969

Query: 878  SKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLRWDKVGERELVGPELVRLTNEAVQK 937
             KL LMEF+YNNS+Q +IGM+PF+ALYG++CR+P  WD+VGE  LV  E V LT + VQ 
Sbjct: 970  EKLPLMEFAYNNSYQVSIGMSPFDALYGRQCRTPFYWDEVGEHRLVVSEDVELTKKQVQI 1029

Query: 938  IRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRFGHKGKLSPKFIGPFEI 997
            IR R++TAQ RQKSYAD RRK L+FEVGD VFLK++P KGV+RFG +GKLSP++IGP+EI
Sbjct: 1030 IRERLKTAQDRQKSYADNRRKDLQFEVGDWVFLKLSPWKGVVRFGKRGKLSPRYIGPYEI 1089

Query: 998  LERVGLVVYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYKPLQLNEDLSYEEKPVRI 1048
            +E VG V Y+L LP  L+ +HDVFHVSMLRKYI+DP HV++ +P++L  D +Y E+PV+I
Sbjct: 1090 IECVGPVAYRLTLPSDLARLHDVFHVSMLRKYISDPSHVLEEQPVELEADFTYVEQPVQI 1149

[Close]
BLAST of CmoCh11G012340 vs. NCBI nr
Match: gi|596052805|ref|XP_007220718.1| (hypothetical protein PRUPE_ppa022673mg [Prunus persica])

HSP 1 Score: 1133.6 bits (2931), Expect = 0.0e+00
Identity = 583/1069 (54.54%), Postives = 743/1069 (69.50%), Query Frame = 1 

Query: 3    FVVQAGFELEPLLHEMSVSTPAGVDLVSRDRVKDGQVIIGNQTLSIDLMVVNMTDFDAIL 62
            F   A   L  L  E+++S P G         +D  V++GN     DL+ + M D D IL
Sbjct: 466  FAHNANVRLSALQTELAISVPTGEIFRVGTVYRDSTVLVGNVFFEADLIPLGMVDLDVIL 525

Query: 63   GMDWLAENRASIDCRKKEVKFSPSTGPTFKFKGTNIGITPKVVSMMKAKRLVQQGGWAIL 122
            GMDWLA +RAS+DC +KEV F     P   F G    +   ++S M AKRL+++G    +
Sbjct: 526  GMDWLARHRASVDCFRKEVVFRSPGRPEVTFYGKRRVLPSYLISAMTAKRLLRKGCSGYI 585

Query: 123  ACVVDVRGKEKTLVNVPIVNEFPNVFPDDLSGISPSRAVDFVIELEPRTGPISKAPYRMA 182
            A V+D R  E  L ++P+V +F +VFP+DL G+ P R ++FVIEL P T  IS+APYRMA
Sbjct: 586  AHVIDTRDNELRLEDIPVVQDFSDVFPEDLPGLPPHREIEFVIELAPGTNLISQAPYRMA 645

Query: 183  PAELKELKAQLQDLLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYP 242
            PAEL+ELK QLQ+L+DKGFI+PS SPWGA VLFVKKKDG+MRLCIDYR+LNK TV+N+YP
Sbjct: 646  PAELRELKTQLQELVDKGFIRPSFSPWGALVLFVKKKDGTMRLCIDYRQLNKITVQNRYP 705

Query: 243  LPRIEDLFDQLREATIFSKIDLRSGYHQIRINEKDVPKTAFRTRYGHYEFVVMSFGLTNA 302
            LPRI+DLFDQL+ A +FSKIDLRSGYHQ+   E+DVPKTAFRTRYGHYEF+VM FGLTNA
Sbjct: 706  LPRIDDLFDQLKGAKVFSKIDLRSGYHQLWGREEDVPKTAFRTRYGHYEFLVMPFGLTNA 765

Query: 303  PTVFMELMNRVFKECLDMFVIVFIDDILIYSRTDLEHEEHLRKVLTTLREHKLYAKFSKC 362
            P  FM+LMNRVF+  LD FVIVFIDDIL+YS++   H +HL  VL TLR  +LYAKFSKC
Sbjct: 766  PAAFMDLMNRVFRRYLDRFVIVFIDDILVYSKSQKAHMKHLNLVLRTLRRRQLYAKFSKC 825

Query: 363  EFWLRQVSFLGHMVSKDEISVDPTKVEAITKWERPTT----------------------N 422
            +FWL +VSFLGH++S + I VDP K+EA+  W RPT+                       
Sbjct: 826  QFWLDRVSFLGHVISAEGIYVDPQKIEAVVNWLRPTSVTEIRSFLGLAGYYRRFVESFIE 885

Query: 423  LKERLVTTPVLIVLESSEGYEIYSDASMKGLGCVLMQHGKVVAYASRQLKEYEKNYPTHD 482
            LK RL T PVL + + S  + IYSDAS +GLGCVLMQHG+V+AYASRQLK++E NYP HD
Sbjct: 886  LKTRLTTAPVLALPDDSGNFVIYSDASQQGLGCVLMQHGRVIAYASRQLKKHELNYPIHD 945

Query: 483  LELAAVVFALKIWRHYLYGEKTQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDVDIQY 542
            LELAAVVFALKIWRHYLYGE  QIFTDHKSLKY FTQ ELN+RQRRWLEL+KDYD  I++
Sbjct: 946  LELAAVVFALKIWRHYLYGETCQIFTDHKSLKYLFTQNELNLRQRRWLELIKDYDCTIKH 1005

Query: 543  HLGKANVVADALSRKTVHSSALIT-REVRVQREFERANIAVATEGVVAQLARLTVQPTLR 602
            H G+ANVVADA SRK+  S A +  R + +  E  +  + +  +   A            
Sbjct: 1006 HPGRANVVADAFSRKSSGSVAYLRGRYLPLMVEMRKLRVGLDVDNQGA------------ 1065

Query: 603  QRIITSQREDPNLQKVLGQLDESPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEIL-MEAH 662
              + T       ++++L    + P+                +C   +E    +       
Sbjct: 1066 -LLATLHVRPVLVERILAAQSQDPL----------------ICTLRVEVANGDRTDCSVR 1125

Query: 663  NSPFFMHPRGTKMYQDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKAAGLLQPLSIP 722
            N    MH    KMY  L++H+WW  +K+++A +V +CL+CQQVKA RQK +GLLQPL IP
Sbjct: 1126 NDGALMH----KMYHTLREHYWWPFIKKEIAKYVRRCLICQQVKAERQKPSGLLQPLPIP 1185

Query: 723  EWKWENIAMDFIVGLPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVR 782
            EWKWE I MDF+  LP+T   +  +WV+VDRLTKS+HFLP    Y+++  A++++ EI+R
Sbjct: 1186 EWKWERITMDFVCKLPRTQSKHDGVWVIVDRLTKSSHFLPVIANYSLNKLAKIFLDEIMR 1245

Query: 783  LHGVPVSIVSDRDPRFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTERLNQILEDMLRAC 842
            LHGVPV IVSDRDPRFTS FW  L +A GT+L FSTAFHPQTDGQ+ER  Q LEDMLRAC
Sbjct: 1246 LHGVPVFIVSDRDPRFTSRFWTKLHEAFGTQLQFSTAFHPQTDGQSERTIQTLEDMLRAC 1305

Query: 843  VLDFKESWDSKLHLMEFSYNNSFQATIGMAPFEALYGKRCRSPLRWDKVGERELVGPELV 902
             L F+  WD KL LMEF+YNNS+Q +IGM+PF+ALYG++CR+P  WD+VGE  LV  E V
Sbjct: 1306 ALQFQGDWDEKLPLMEFAYNNSYQVSIGMSPFDALYGRQCRTPFYWDEVGEHRLVVSEDV 1365

Query: 903  RLTNEAVQKIRARMRTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRFGHKGKLS 962
             LT + VQ IR R++TAQ RQKSYAD RRK L+FEVGD VFLK++P KGV+RFG +GKLS
Sbjct: 1366 ELTKKQVQIIRERLKTAQDRQKSYADNRRKDLQFEVGDWVFLKLSPWKGVVRFGKRGKLS 1425

Query: 963  PKFIGPFEILERVGLVVYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYKPLQLNEDL 1022
            P++IGP+EI+ERVG V Y+LALP  L+ +HDVFHV MLRKYI+DP HV++ + ++L  D 
Sbjct: 1426 PRYIGPYEIIERVGPVAYRLALPSDLTRLHDVFHVYMLRKYISDPSHVLEEQLVELEADF 1485

Query: 1023 SYEEKPVRILAREVKTLRNRSIAFVKELLGRKTPRKKRTKNKEEKGRKR 1048
            +Y E+PV+IL  + + LR+R I  VK +L R    +K T   E++ R++
Sbjct: 1486 TYVEQPVQILDWKTQVLRSREIPLVK-VLWRSHTVEKATWEPEDQMREQ 1500

[Close]
BLAST of CmoCh11G012340 vs. NCBI nr
Match: gi|596224288|ref|XP_007224141.1| (hypothetical protein PRUPE_ppa016115mg [Prunus persica])

HSP 1 Score: 1131.3 bits (2925), Expect = 0.0e+00
Identity = 582/1041 (55.91%), Postives = 736/1041 (70.70%), Query Frame = 1 

Query: 46   LSIDLMVVNMTDFDAILGMDWLAENRASIDCRKKEVKFSPSTGPTFKFKGTNIGITPKVV 105
            +S DL+ + M D D ILGMDWLA +RAS+DC + EV F     P   F G          
Sbjct: 258  ISADLIPLGMVDLDVILGMDWLARHRASVDCFRNEVVFRSPGRPKVTFYG---------- 317

Query: 106  SMMKAKRLVQQGGWAILACVVDVRGKEKTLVNVPIVNEFPNVFPDDLSGISPSRAVDFVI 165
              M AKRL+++G  + +A V+D R     L ++ +V +FP+VFP+DL G+   R ++FVI
Sbjct: 318  EPMTAKRLLRKGCSSYIAYVIDTRDNGLRLEDIRVVQDFPDVFPEDLPGLPHHREIEFVI 377

Query: 166  ELEPRTGPISKAPYRMAPAELKELKAQLQDLLDKGFIQPSVSPWGAPVLFVKKKDGSMRL 225
            EL P T PIS+APYRMAPAEL+ELK QLQ+L+DKGFI+ S SPWGAPVLFVKKKDG+MRL
Sbjct: 378  ELAPGTNPISQAPYRMAPAELRELKIQLQELVDKGFIRLSFSPWGAPVLFVKKKDGTMRL 437

Query: 226  CIDYRELNKRTVKNKYPLPRIEDLFDQLREATIFSKIDLRSGYHQIRINEKDVPKTAFRT 285
            CIDYR+LNK TV+N+YPLPRI+DLFDQL+ A +FSKIDLRSGYHQ+R+ E+DV KTAFRT
Sbjct: 438  CIDYRQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREEDVTKTAFRT 497

Query: 286  RYGHYEFVVMSFGLTNAPTVFMELMNRVFKECLDMFVIVFIDDILIYSRTDLEHEEHLRK 345
            RYGHYEF+VM FGLTNAP  FM+LMNRVF+  LD FVIVF+DDIL+YS++   H +HL  
Sbjct: 498  RYGHYEFLVMPFGLTNAPAAFMDLMNRVFRRYLDRFVIVFVDDILVYSKSQKAHMKHLNL 557

Query: 346  VLTTLREHKLYAKFSKCEFWLRQVSFLGHMVSKDEISVDPTKVEAITKWER--------- 405
            VL TLR  +LYAKFSKC+FWL  VSFLGH++S + I VDP K+EA+  W R         
Sbjct: 558  VLRTLRRRQLYAKFSKCQFWLDIVSFLGHVISAEGIYVDPQKIEAVVNWLRPTSVTEIRS 617

Query: 406  --------------------PTTNLKERLV----------TTPVLIVLESSEGYEIYSDA 465
                                P T L  + V          T P     + S  + IYSDA
Sbjct: 618  FLGLARYYRRFVEGFSTIAAPLTYLTRKGVKFVWSDKCEETFP-----DDSGNFVIYSDA 677

Query: 466  SMKGLGCVLMQHGKVVAYASRQLKEYEKNYPTHDLELAAVVFALKIWRHYLYGEKTQIFT 525
            S +GLGCVLMQHG+V+AYASRQLK++E NYP HDLELAAVVFALKIWRHYLYGE  QIFT
Sbjct: 678  SQQGLGCVLMQHGRVIAYASRQLKKHELNYPVHDLELAAVVFALKIWRHYLYGETCQIFT 737

Query: 526  DHKSLKYFFTQKELNMRQRRWLELVKDYDVDIQYHLGKANVVADALSRKTVHSSALITRE 585
             HKSLKY FTQKELN+RQRRWLEL+KDYD  I++H G+ANVVADAL  + +         
Sbjct: 738  YHKSLKYLFTQKELNLRQRRWLELIKDYDCTIEHHPGRANVVADALKMRKL--------- 797

Query: 586  VRVQREFERANIAVATEGVVAQLARLTVQPTLRQRIITSQREDPNLQKVLGQLDESPVDG 645
                    R  + V  +G  A LA L V+P L +RI+ +Q +DP +  +  ++       
Sbjct: 798  --------RVGLDVDNQG--ALLATLHVRPVLVERILAAQSQDPLICTLRVEVANGDRTD 857

Query: 646  FSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFFMHPRGTKMYQDLKQHFWWKSMKR 705
             S  +D  L+   +L VP  E L++EIL EAH S F MHP  TKMY  L++H+WW  MK+
Sbjct: 858  CSVRNDGALMVGNKLYVPNDEALKREILEEAHESAFAMHPGSTKMYHTLREHYWWPFMKK 917

Query: 706  DVAGFVSKCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAMDFIVGLPKTPKGYTVIWVV 765
            ++A +V +CL+CQQVKA RQK +GLLQPL IPEWKWE I MDF+  LP+T   +  +WV+
Sbjct: 918  EIAEYVRRCLICQQVKAERQKPSGLLQPLPIPEWKWERITMDFVFKLPRTQSKHDGVWVI 977

Query: 766  VDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIVSDRDPRFTSAFWRGLQKAL 825
            VDRLTKSA+FLP +  Y+++  A+L++ EIVRLH VP+SIVSDRDPRFTS FW  L +A 
Sbjct: 978  VDRLTKSAYFLPVRANYSLNKLAKLFIDEIVRLHRVPISIVSDRDPRFTSRFWTKLNEAF 1037

Query: 826  GTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLDFKESWDSKLHLMEFSYNNSFQATIG 885
            GT+L FSTAFH QTDGQ+ER  Q LE+MLRAC L F+  WD KL LMEF+YNNS+Q +IG
Sbjct: 1038 GTQLQFSTAFHSQTDGQSERTIQTLENMLRACALQFRGDWDEKLPLMEFAYNNSYQVSIG 1097

Query: 886  MAPFEALYGKRCRSPLRWDKVGERELVGPELVRLTNEAVQKIRARMRTAQSRQKSYADVR 945
            M+PF ALYG++CR+P  WD+VGE  LV  E V LT + VQ IR R++TAQ RQKSYAD R
Sbjct: 1098 MSPFNALYGRQCRTPFYWDEVGEHRLVVSEDVELTKKQVQIIRERLKTAQDRQKSYADNR 1157

Query: 946  RKSLEFEVGDPVFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVGLVVYKLALPPALSG 1005
            RK L+FEV D VFLK++P KGV+RFG +GKLS ++IGP+EI+ERVG V Y+LALP  L+ 
Sbjct: 1158 RKDLQFEVRDWVFLKLSPWKGVVRFGKQGKLSSRYIGPYEIIERVGPVAYRLALPSDLAR 1217

Query: 1006 VHDVFHVSMLRKYITDPIHVIDYKPLQLNEDLSYEEKPVRILAREVKTLRNRSIAFVKEL 1048
            +HDVFH+SMLRKYI+DP HV++ +P++L  D +Y E+PV+IL  + + LR+R I  VK +
Sbjct: 1218 LHDVFHISMLRKYISDPSHVLEEQPVELEADFTYVEQPVQILDWKTQVLRSREIPLVK-V 1263

[Close]
BLAST of CmoCh11G012340 vs. NCBI nr
Match: gi|307136318|gb|ADN34141.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 1125.5 bits (2910), Expect = 0.0e+00
Identity = 602/1084 (55.54%), Postives = 740/1084 (68.27%), Query Frame = 1 

Query: 3    FVVQAGFELEPLLHEMSVSTPAGVDLVSRDRVKDGQVIIGNQTLSIDLMVVNMTDFDAIL 62
            FV+ A  E+EPL H +SVSTP G  ++S+++VK  Q+ I    + + L+V++M DFD IL
Sbjct: 310  FVLHARLEVEPLHHVLSVSTPFGECMLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVIL 369

Query: 63   GMDWLAENRASIDCRKKEVKFSPSTGPTFKFKGTNIGITPKVVSMMKAKRLVQQGGWAIL 122
            GMDWLA N ASIDC +KE+ F+P +   FKFK       PKV+S M+A +L+ QG W+IL
Sbjct: 370  GMDWLAANHASIDCSRKEIAFNPPSMANFKFKEEGSRSLPKVISAMRASKLLSQGIWSIL 429

Query: 123  ACVVDVRGKEKTLVNVPIVNEFPNVFPDDLSGISPSRAVDFVIELEPRTGPISKAPYRMA 182
            A VVD R  + +L + P+V ++P+VFP++L G+ P R ++F IELE  T PIS+APYRMA
Sbjct: 430  ASVVDTREVDVSLSSKPMVRDYPDVFPEELPGLPPHREIEFAIELELGTVPISRAPYRMA 489

Query: 183  PAELKELKAQLQDLLDKGFIQPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYP 242
            PAELKELK                           KKD SMRLCIDYRELNK TVKN+YP
Sbjct: 490  PAELKELK---------------------------KKDRSMRLCIDYRELNKVTVKNRYP 549

Query: 243  LPRIEDLFDQLREATIFSKIDLRSGYHQIRINEKDVPKTAFRTRYGHYEFVVMSFGLTNA 302
            LP+I+DLFDQL+ AT+FSKIDLRSGYHQ+RI ++DVPKTAF +RYGHYEF+VMSF LTNA
Sbjct: 550  LPKIDDLFDQLQGATLFSKIDLRSGYHQLRIKDRDVPKTAFHSRYGHYEFIVMSFALTNA 609

Query: 303  PTVFMELMNRVFKECLDMFVIVFIDDILIYSRTDLEHEEHLRKVLTTLREHKLYAKFSKC 362
            P+VFM+LMNRVF+E LD FVIVFI+DILIYS+ + EHEEHLR VL TL+++KLYAKF KC
Sbjct: 610  PSVFMDLMNRVFREFLDTFVIVFINDILIYSKIEAEHEEHLRMVLQTLQDNKLYAKFLKC 669

Query: 363  EFWLRQVSFLGHMVSKDEISVDPTKVEAITKWERPTT----------NLKERLVTTPVLI 422
            EFWL+QVSFLGH+VSK  +SVD  K+EA+T W RP+T          NLK++LVTTPVL 
Sbjct: 670  EFWLKQVSFLGHVVSKAGVSVDLAKIEAVTSWPRPSTVSEACEDSFQNLKQKLVTTPVLT 729

Query: 423  VLESSEGYEIYSDASMKGLGCVLMQHGKVVAYASRQLKEYEKNYPTHDLELAAVVFALKI 482
            V + S  + IYSDAS KG GCVLMQ GKVVAYASRQLK +E+NYPTHDLELAAVVFALKI
Sbjct: 730  VPDGSGSFVIYSDASKKGFGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 789

Query: 483  WRHYLYGEKTQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDVDIQYHLGKANVVADAL 542
            WRHYLYG+K QIFT HK+                           ++Y   +  +  +  
Sbjct: 790  WRHYLYGQKIQIFTYHKN---------------------------LKYFFTQKEL--NMR 849

Query: 543  SRKTVHSSALITREVRVQREFERANIAVATEGVVAQLARLTVQPTLRQRIITSQREDPNL 602
             R+ +     + ++   +  +      V  + +  +LA+LTVQPTLRQ+II +Q  +P L
Sbjct: 850  QRRWLE----LVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTLRQKIIDAQSNNPYL 909

Query: 603  QKVLGQLDESPVDGFSKSSDEGLLYQGRLCVPAIEDLRKEILMEAHNSPFFMHPRGTKMY 662
                G  +      FS SSD GLL++ RL VP+   ++ E+L EAH+SPF MH   TKMY
Sbjct: 910  VGKRGLAETGQAVEFSISSDGGLLFERRLYVPSDSAVKTELLSEAHSSPFSMHSGSTKMY 969

Query: 663  QDLKQHFWWKSMKRDVAGFVSKCLVCQQVKAPRQKAAGLLQPLSIPEWKWENIAMDFIVG 722
            Q LK+ +WW ++KR+VA FVSKCLVCQQVKAPRQK  GLLQPLS+P+WKWEN++MDFI G
Sbjct: 970  QHLKRVYWWSNIKREVAEFVSKCLVCQQVKAPRQKPTGLLQPLSVPKWKWENVSMDFITG 1029

Query: 723  LPKTPKGYTVIWVVVDRLTKSAHFLPGKVTYTVDNWAQLYVKEIVRLHGVPVSIVSDRDP 782
            LP+T +G+TVIWVVVDRLTKSAHF+ GK TYT   WAQLY+ EIVRLHGVPVSIVS+RD 
Sbjct: 1030 LPRTLRGFTVIWVVVDRLTKSAHFIQGKSTYTASKWAQLYMSEIVRLHGVPVSIVSNRDA 1089

Query: 783  RFTSAFWRGLQKALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLDFKESWDSKLHL 842
            RFTS F +GLQ A+GTRLDFST FHPQTD QTERLNQ+LEDMLRA  L F  SWDS LHL
Sbjct: 1090 RFTSKFLKGLQAAMGTRLDFSTTFHPQTDCQTERLNQVLEDMLRAYALGFPGSWDSHLHL 1149

Query: 843  MEFSYNNSFQATIGMAPFEALYGKRCRSPLRWDKVGERELVGPELVRLTNEAVQKIRARM 902
            MEF+YNNSFQATI MAPFEALY KRCRSPL W                            
Sbjct: 1150 MEFAYNNSFQATIDMAPFEALYSKRCRSPLCW---------------------------- 1209

Query: 903  RTAQSRQKSYADVRRKSLEFEVGDPVFLKVAPMKGVLRFGHKGKLSPKFIGPFEILERVG 962
               +SRQKSYADVR K LEF+VGD VFLKVAPMKGVLRF   GKLSP+F+ PFEILER+G
Sbjct: 1210 --GESRQKSYADVRWKDLEFDVGDKVFLKVAPMKGVLRFERSGKLSPRFVRPFEILERIG 1269

Query: 963  LVVYKLALPPALSGVHDVFHVSMLRKYITDPIHVIDYKPLQLNEDLSYEEKPVRILAREV 1022
             V Y+LALPP+LS VHDVFHVSMLRKY+ D                SY    VR+ A  +
Sbjct: 1270 PVAYRLALPPSLSAVHDVFHVSMLRKYMPDS---------------SYRRPAVRVYACYI 1288

Query: 1023 KTLRNRSIAFV-KELLGRKTPRKKRTKNKEEKGRKRTEIGNENAAGRREKARRKIGQSRP 1076
            + +  R+ + V      RK+  + RT+   E   + + I +  A    + +R     S  
Sbjct: 1330 ERVELRATSRVASREPSRKSSHELRTEPSRESRAESSRIESSRAEPPSKPSRTPCSPSHL 1288

The following BLAST results are available for this feature:
BLAST of CmoCh11G012340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YG31B_YEAST1.3e-11832.34Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
TF25_SCHPO5.6e-6929.67Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF211_SCHPO5.6e-6929.67Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
TF212_SCHPO5.6e-6929.67Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
TF21_SCHPO5.6e-6929.67Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of CmoCh11G012340 vs. TrEMBL
Match NameE-valueIdentityDescription
Q84KB0_CUCME0.0e+0067.94Pol protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
M5WLY8_PRUPE0.0e+0056.04Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1[more]
M5Y103_PRUPE0.0e+0055.91Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016115mg PE=4 SV=1[more]
E5GCE2_CUCME0.0e+0055.54Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A5BA10_VITVI0.0e+0057.17Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009489 PE=4 SV=1[more]
BLAST of CmoCh11G012340 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG00860.15.5e-0640.00ATMG00860.1 DNA/RNA polymerases superfamily protein[more]
BLAST of CmoCh11G012340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|28558781|gb|AAO45752.1|0.0e+0067.94pol protein [Cucumis melo subsp. melo][more]
gi|595885005|ref|XP_007213082.1|0.0e+0056.04hypothetical protein PRUPE_ppa021229mg [Prunus persica][more]
gi|596052805|ref|XP_007220718.1|0.0e+0054.54hypothetical protein PRUPE_ppa022673mg [Prunus persica][more]
gi|596224288|ref|XP_007224141.1|0.0e+0055.91hypothetical protein PRUPE_ppa016115mg [Prunus persica][more]
gi|307136318|gb|ADN34141.1|0.0e+0055.54ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf
IPR013242Retroviral aspartyl protease
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006310 DNA recombination
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G012340.1CmoCh11G012340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 216..375
score: 1.3
IPR000477Reverse transcriptase domainPROFILEPS50878RT_POLcoord: 197..376
score: 11
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 705..814
score: 4.1
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 694..857
score: 2
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 702..861
score: 2.5E-27coord: 418..513
score: 1.
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 695..853
score: 8.65
IPR013242Retroviral aspartyl proteasePFAMPF08284RVP_2coord: 2..84
score: 2.1
NoneNo IPR availableunknownCoilCoilcoord: 179..199
scor
NoneNo IPR availableGENE3DG3DSA:3.10.10.10coord: 165..306
score: 7.6
NoneNo IPR availableGENE3DG3DSA:3.30.70.270coord: 307..384
score: 6.
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 209..1024
score:
NoneNo IPR availablePANTHERPTHR24559:SF207SUBFAMILY NOT NAMEDcoord: 209..1024
score:
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 140..520
score: 3.11E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G012340Wax gourdcmowgoB0164
CmoCh11G012340Cucurbita maxima (Rimu)cmacmoB679
CmoCh11G012340Cucurbita pepo (Zucchini)cmocpeB127