CmoCh11G012300 (gene) Cucurbita moschata (Rifu)

NameCmoCh11G012300
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRNA-directed DNA polymerase homolog
LocationCmo_Chr11 : 7497039 .. 7504462 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATCCAGACGACAATACTAACATTACTGATGCACGATTGAGAGAAGCACAACAACGAACTATGGAAAGACTAATTCGAGGAATAGAAGAGTTGACTGATCGAATAGGAAGATTGGAGATTCAAAATCAAGCACGACAGAGGATTCCACAACCTACGCCCTCAACCGATACATATGAAGGCGACAATTCTGATCACCACGAGGATAATCCACATGCGGTTGGTCCTGGCTTGATGCGAGGGAGAGACCATGGAAGAAAGTATCATAATTTACAACAACGAGTTCCTTATGATGATAGAATTGATCGTAACGTGGGGAGCATCAAATTAAAACTTCCCAAGTTTTATGGCAAAACCGATCCAGAGGAGTACCTTCAATGGGAGAAAACGGTGGAGTCAGTGTTCAACTGCCATAATTTTAGTGATGAAAAGAAGGTACTGTTATGCATTGCTCAATTCAAACAATATGCTCAAATTTGGTGGGATAAATTGATGTCAAGTAGGAGAAGAAATCTTGAAGCACCAATTGATTCATGGGTCGAGTTCAAAGAGTCCATGAGGAAGCGTTTTGTTCCACAATATTTTCAACGGGACATGGCGCAAAAGCTTCAAGCGTTGAAACAAGGACGCAAATCTGTGGAGGATTATTACAAGGAGATGGATACATTGATGGATCGACTTGAACTCGATGAGGACATGGAGGCTCTCATGGCGCGGTTTCTTAATGGGTTAAACACAGAGATTGCAGACAAGACTGATTTACAGCCTTATTCTAATATTGAGGAGTTGTTGCACATTGCAATTAAGATCGAGAGGCAAATCCAACGAAGGTCTCAACGGTATTCTTCTAAAACTTTTCCCAATTCTACTTCTACATGGAAAAAGGATAGTAAGAACATTGATTATAAGCATAGAAATCAAGAGATTAATGAGAAGCCTCAAGCTAAATTTGAGAAAGGGGAGAGTTCTAGAACAGGGAAAGAAAAAGTAGAAAAGTCTAATGTTCGAAATAGGGATTTAAAGTGTTGGAGATGTCAAGGGGTAGGACACTATAGTAGAGATTGCCCAAATGCAAGAATTATGACCATCAAGGAGGGAGAAATTGTTACGGATGACGAGGCACATGACGACATAAATGAGGAAACTGATGAGAGTGAGGAGTTTAGTGAAGAGGACCCTACACATATATCTTTGGTTACTCGACGAGCTCTAAACACCCACATTAAGGAGGACGGCCTAGACCAAAGGGAGAACTTGTTTCAAACTCGGTGTCTTGTTCAATCTGTACCTTGTAGTGTTGTCATTGATAGCGGTAGTTGCACCAATGTTGTGAGTTCCATTCTGGTCAAAAGACTTAATTTAAAGACACAACCACATCCAAGACCCTACAAGCTTCAATGGTTGAATGATTGTGGGGAAGTACGGGTAACTCAACAAACTCTTGTTTCTTTTACAATTGGAAAATATGTTGATGATGTTTTATGTGATGTTGTATCCATGCATGTTGGAGATTTACTACTGGGGAGGCCATGGCAATTTGATCGTCGGGTAATGTATGATGGGTATGCAAATCGATACTCCTTTACTCACAACGGTAGAAAAACTACTCTTATCCCATTGTCTCCAAAAGATGTATTTATTGATCATTGCAAACTTGAAAAGAAAAGGCAAGAGGCTGATGCAAAAGCAGAGATTGAAAAAGAATCAAGTGAAAAAAAGAGCTTGAGTGAAAAGCAAGAGAGTAACACTCAGCCTAGAGAAAAAAAAGAGAGAAAAGCCAAATCAGTAAGCTTGTATGTTAGATCAAGTGAGGCTAGGAATGTTTTGCTCTCTAACCAGACTATTCTTGTACTTATGTGCAAGGGGTCTTGTTACTTTACTAACATGCTTAACCCTTCTTTGCCTAGTGATTTTGTTGTGCTTTTGCAAGAGTTTGAACATTTATTTTCCGAGGAGATGCCTAGTAGTTTGCCACCACTTAGAGGGATTGAACACAAGATTGACTTCATTCCTGGCGCGCCCATTCCAAACCGACCAGCTTATAGGACTAATCCAAAGGAGGCTGAAGAGATACAAAGGCAAGTAAGTGAACTCCTTGCTAAAGGGTATGTACGTGAAAGTTTGAGTCCTTGTTCTGTTCCAGTTATTCTTGTACCTAAGAAAGATGGTTCTTGGCGTATGTGTGTTGATTGTAGGCTATAAACAAGATAACTATAAAGTATAGGCATCCAATTCCCAGATTAGATGATATGCTTGATGAATTGCATGGATGTAGTCTTTTTACTAAGATTGATTTAAAATCGGGTTATCATCAAATTCGCATGCATATTGGGGATGAGTGGAAAACAGCTTTTAAAACCAAGTATGGTCTTTATGAATGGTTGGTTATGCCTTTTGGATTAACTAATGCACCTAGTACATTCATGAGACTAATGAATCATGTCTTACGAGAATACTTAGGTAAGTTTGTGGTTGTTTATTTTGATGACATCCTTGTTTACTCTAAATCTTTAGATGATCATATTACCCATGTACGCAATGTTTTGACTACTTTAAGAAACGAATGTTTGTACGTAAATTTAAAGAAATGTAGCTTTTGCATGGAAAAAGTTAACTTTCTTGGGTTTGTAGTTTCATCTAATGGTGTTGAGGTTGATGAGGAGAAAGTGAAGGCTATAAAAGATTGGCCTACTCCGAAAAATGTAAGTGAGGTAAGAAGTTTTCATGGTCTTGCAAGTTTCTACCGTAGGTTCATTAAAAATTTTAGTACAATTGCTTCACCCTTGAATGAACTTGTTAAGAAAAATGTATCCTTTATATGGGAAAAAGATCAAGAACTTGCTTTTAATACTTTGAAAGAAAAATTGAGTTCTGCTCCCTTGCTTGCATTACCTAATTTTGAGTCTACTTTTGAAATTGAATGTGATGCTAGTGGAGTAGGGATAGGTGCTGTATTAATGCAAAATCAAAGACCTTTAATGTTCTTTAGTGAGAAGTTGACTGGTGCATCTTTGAGGTATCCAACTTATGACAAAGAGCTTTATGCTTTGGTTCGTGCATTGCAAACCTGGCAACATTATCTTTGGCCTAAGGAGTTCATTATTCATACGGATCATGAAAGTTTAAAGCATTTGAGAGTACAAAATAAACTCAACAGACGACATGCTAAGTGGTTAGAATTTATTGAAACATTCCCGTATGTCATAAAATATAAACAAGGAAAGGAGAACATTGTAGCAGATGCTTTATCACGAAGGTATGTCCTCCTCAATACTTTGAATGCTAGGTTGTTGGGTTTTGAACACATAAAGGATTTGTATCAACATGACATGTTCTTTGCTCCTTTTGTTGAATCTTGTGAAAAAGGACTCATTGTGGATAATTACTTGTTGTTAGATGGATTTTTGTTCCGAAAAGGCAAACTTTGCATACCATCTTGTTCCATCCGTGAGCTACTTGTGAGGGAAGCTCATGGAGGTGGTTTAATGGCACACCATGGAGTTTCTAAAACTTATGATATGCTCTCTGAACATTTTTTTTGGCCTAAAATGAGACATGATGTTCATAAAGTTTGTGGTCGTTGCATAGCATGTAAACAAGCTAAGTCTAGGCTTCAACCACATGGTTTATACTCCCCATTACCAGTTCCTAATGGTCCATGGATTGATATATCAATGGATTTTGTTTTAGGTTTACCTAGGACTAGGAAAGGTTATGATAGCATTTTTGTTGTGGTTGATCGATTTAGTAAAATGGCTCATTTTATTCCTTGTCACAAAACTGATGATGCAAAACATATTGCAGACCTATTCTTTAGGGAAGTTGTACGATTGCATGGCATTCCTAAAAGCATCGTTAGTGATCGTGATGTAAAATTTTTAAGCCACTTTTGGCGTGTTTTATGGGGTAAGTTGGGAACTAAGCTAGTATATTCAANTGGAGATTTACTACTGGGGAGGCCATGGCAATTTGATCGTCGGGTAATGTATGATGGGTATGCAAATCGATACTCCTTTACTCACAACGGTAGAAAAACTACTCTTATCCCATTGTCTCCAAAAGATATATTTATTGATCATTGCAAACTTGAAAAGAAAAGGCAAGAGGCTGATGCAAAAGCAGAGATTGAAAAAGAATCAAGTGAAAAAAAGAGCTTGAGTGAAAAGCAAGAGAGTAACACTCAGCCTAGAGAAAAAAAAGAGAGAAAAGCCAAATCAGTAAGCTTGTATGTTAGATCAAGTGAGGCTAGGAATGTTTTGCTCTCTAACCAGACTATTCTTGTACTTATGTGCAAGGGGTCTTGTTACTTTACTAACATGCTTAACCCTTCTTTGCCTAGTGATTTTGTTGTGATTTTTGTTGTGCTTTTGCAAGAGTTTGAAGATTTATTTTTCGAGGAGATGCCTAGTAGTTTGCCACCACTTAGAGGGATTGAACACAAGATTGACTTCATTCCTGGCGCGCCCATTCCAAACCGACCAGCTTATAGGACTAATCCAAAGGAGGCTGAAGAGATACAAANATATGATGTTAAATGTCTTTCTTTTTTCCTCTTGATTACTATATGTAACTCTCATATGTTACTACGTTAAATTAGTCCTTAAACATTTTCTTTCTTTAATTCGTTTCTTTGTCGTTATTCGGATTGCTCCTTCAATACCCTTGTTTATGTGTTGAGTGTGCTGTCTATTCACTTTGAATTGCACTTAGCTCTATAACATAGCTNTTGTTCTGTTCCAGTTATTCTTGTACCTAAGAAAGATGGTTCTTGGCGTATGTGTGTTGATTGTAGGCTATAAACAAGATAACTATAAAGTATAGGCATCCAATTCCCAGATTAGATGATATGCTTGATGAATTGCATGGATGTAGTCTTTTTACTAAGATTGATTTAAAATCGGGTTATCATCAAATTCGCANCGTGAGGGAGCGCTTGTGAGGTCCTTTTTTTTTTCTTTTACCTTTCTTTTGTAGCATGGAAAATCCAAACGACAATACTAACATTACTGATGCACGATTGAGAGAAGCACAACAACGAACCATGGAAAGACTAATTCGAGGAATAGAAGAGTTGACTGATCGAATAGGAAGATTGGAGATTCAAAATCAAGCACGACAGAGGATTCCACAACCTACGCCCTCAACCGATACATATGAAGGNCATCCTTGTTTACTCTAAATCTTTAGATGATCATATTACCCATGTACGCAATGTTTTGACTACTTTAAAAAACGAATGTTTGTACGTAAATTTAAAGAAATGTAGCTTTTGCATGGAAAAATTTAACTTTCTTGGGTTTGTAGTTTCATCTAATGGTGTTGAGGTCGATGAGGAGAAAGTGAAGGCTATAAAAGATTGGCCTACACCGAAAAATGTAAGTGAGGTAAGAAGTTTTCATGGTCTTGCAAGTTTCTACCGTAGGTTCATTAAAAATTTTAGTACAATTGCTTCACCCTTGAATGAACTTGTTAAGAAAAATGTATCCTTTATATGGGAAAAAGATCAAGAACTTGCTTTTAATACTTTGAAAGAAAAATTGAGTTCTGCTCCCTTGCTTGCATTACCTAATTTTGAGTCTACTTTTGAAATTGAATGTGATGCTAGTGGAGTAGGGATAGGTGCTGTATTAATGCAAAATCAAAGACCTTTAATGTTCTTTAGTGAGAAGTTGACTGGTGCATCTTTGAGGTATCCAACTTATGACAAAGAGCTTTATGCTTTGGTTCGTGCATTGCAAACCTGGCAACATTATCTTTGGCCTAAGGAGTTCATTATTCATACGGATCATGAAAGTTTAAAGCATTTGAGAGTACAAAATAAACTCAACAGACGACATGCTAAGTGGTTAGAATTTATTGAAACATTCCCGTATGTCATAAAATATAAACAAGGAAAGGAGAACATTGTAGCAGATGCTTTATCACGAAGGTATGTCCTCCTCAATACTTTGAATGCTAGGTTGTTGGGTTTTGAACACATAAAGGATTTGTATCAACATGACATGTTCTTTGCTCCTTTTGTTGAATCTTGTGAAAAAGGACTCATTGTGGATAATTACTTGTTGTTAGATGGATTTTTGTTCCGAAAAGGCAAACTTTGCATACCATCTTGTTCCATCCGTGAGCTACTTGTGAGGGAAGCTCATGGAGGTGGTTTAATGGCACACCATGGAGTTTCTAAAACTTATGATATGCTCTCTAAACATTTTTTTTGGCCTAAAATGAGACATGATGTTCATAAAGTTTGTGGTCGTTGCATAGCATGTAAACAAGCTAAGTCTAGGCTTCAACCACATGGTTTATACTCCCCATTACCAGTTCCTAATGGTCCATGGATTGATATATCAATGGATTTTGTTTTAGGTTTACCTAGGACTAGGAAAGGTTATGATAGCATTTTTGTTGTGGTTGATCGATTTAGTAAAATGGCTCATTTTATTCCTTGTCACAAAACTGATGATGCAAAACATATTGCAGACCTGTTCTTTAGGGAAGTTGTACGATTGCATGGCATTCCTAAAAGCATCGTTAGTGATCGTGATGTAAAATTTTTAAGCCACTTTTGGCGTGTTTTATGGGGTAAGTTGGGAACTAAGCTAGTATATTCAACTACTTGTCATCCTCAAACGGATGGACAAACTGAAGTTGTTAACAGAACCATGACTGCTATGCTTAGGGCTATTATTGATAAGAATCTTAAGACTTGGGAGGATTGTTTGCCATTTATAGAATTTGCATATAATAGGGTTGTTCATAGCACTACTAAATGCACACCTTTTGAAATTGTTTATGGCTTTAATCCTTTAACCCCTATTGACTTGTTACCCATACCGTCAAAAGAATTTGTGAATTTTGATGCAAATGCCAAGGTTGAGTTTTCTCATAAACTGCACAAGCAAGTGAAAGAACAAATTGAGAAACAAAATTCCAAGGTTGCCACCCGAATTAATAAAGGACGTAAGATTGTCATCTTCAAGCCAGGAGATTGGGTTTGGGTGCATTTCCGAAAAGAAAGATTTCCTACTCAAAGAAAATCTAAGCTTTTACCACGAGGAGATGGACCTTTTCAAGTTCTTGAGCGCATCAACGACAATGCTTATAAAATTGATTTACCAGGTAAGTACGGTGTTAGTGCAACTTTTAATGTTGTTGATTTGAGCCCTTTTGATGTAGGTGATGGCTTGGATTCGAGGACGAATCCTTCTCAAGAGGGGGAGAATGATATGAACCACGACCAAGGAATTTCCATACCTCAAGGTCCAATTACAAGGACGAGAGCCAAGAAGCTACAACAAACTTTATACAGTTATATTCAAGCTATGGTGAGCTCATCAAAGGAAATTCTAGAAGACGCTGTAGACCTCCCTTATATGTTGTGCAAAGTTGAGGTTCAAGAAAGAGATGAATTAAATGCACTTTAA

mRNA sequence

ATGGAAAATCCAGACGACAATACTAACATTACTGATGCACGATTGAGAGAAGCACAACAACGAACTATGGAAAGACTAATTCGAGGAATAGAAGAGTTGACTGATCGAATAGGAAGATTGGAGATTCAAAATCAAGCACGACAGAGGATTCCACAACCTACGCCCTCAACCGATACATATGAAGGCGACAATTCTGATCACCACGAGGATAATCCACATGCGGTTGGTCCTGGCTTGATGCGAGGGAGAGACCATGGAAGAAAGTATCATAATTTACAACAACGAGTTCCTTATGATGATAGAATTGATCGTAACGTGGGGAGCATCAAATTAAAACTTCCCAAGTTTTATGGCAAAACCGATCCAGAGGAGTACCTTCAATGGGAGAAAACGGTGGAGTCAGTGTTCAACTGCCATAATTTTAGTGATGAAAAGAAGGTACTGTTATGCATTGCTCAATTCAAACAATATGCTCAAATTTGGTGGGATAAATTGATGTCAAGTAGGAGAAGAAATCTTGAAGCACCAATTGATTCATGGGTCGAGTTCAAAGAGTCCATGAGGAAGCGTTTTGTTCCACAATATTTTCAACGGGACATGGCGCAAAAGCTTCAAGCGTTGAAACAAGGACGCAAATCTGTGGAGGATTATTACAAGGAGATGGATACATTGATGGATCGACTTGAACTCGATGAGGACATGGAGGCTCTCATGGCGCGGTTTCTTAATGGGTTAAACACAGAGATTGCAGACAAGACTGATTTACAGCCTTATTCTAATATTGAGGAGTTGTTGCACATTGCAATTAAGATCGAGAGGCAAATCCAACGAAGGTCTCAACGGTATTCTTCTAAAACTTTTCCCAATTCTACTTCTACATGGAAAAAGGATAGTAAGAACATTGATTATAAGCATAGAAATCAAGAGATTAATGAGAAGCCTCAAGCTAAATTTGAGAAAGGGGAGAGTTCTAGAACAGGGAAAGAAAAAGTAGAAAAGTCTAATGTTCGAAATAGGGATTTAAAGTGTTGGAGATGTCAAGGGGTAGGACACTATAGTAGAGATTGCCCAAATGCAAGAATTATGACCATCAAGGAGGGAGAAATTGTTACGGATGACGAGGCACATGACGACATAAATGAGGAAACTGATGAGAGTGAGGAGTTTAGTGAAGAGGACCCTACACATATATCTTTGGTTACTCGACGAGCTCTAAACACCCACATTAAGGAGGACGGCCTAGACCAAAGGGAGAACTTGTTTCAAACTCGGTGTCTTGTTCAATCTGTACCTTGTAGTGTTGTCATTGATAGCGGTAGTTGCACCAATGTTGTGAGTTCCATTCTGGTCAAAAGACTTAATTTAAAGACACAACCACATCCAAGACCCTACAAGCTTCAATGGTTGAATGATTGTGGGGAAGTACGGGTAACTCAACAAACTCTTGTTTCTTTTACAATTGGAAAATATGTTGATGATGTTTTATGTGATGTTGTATCCATGCATGTTGGAGATTTACTACTGGGGAGGCCATGGCAATTTGATCGTCGGGTAATGTATGATGGGTATGCAAATCGATACTCCTTTACTCACAACGGTAGAAAAACTACTCTTATCCCATTGTCTCCAAAAGATGTATTTATTGATCATTGCAAACTTGAAAAGAAAAGGCAAGAGGCTGATGCAAAAGCAGAGATTGAAAAAGAATCAAGTGAAAAAAAGAGCTTGAGTGAAAAGCAAGAGAGTAACACTCAGCCTAGAGAAAAAAAAGAGAGAAAAGCCAAATCAGTAAGCTTGTATGTTAGATCAAGTGAGGCTAGGAATGTTTTGCTCTCTAACCAGACTATTCTTGTACTTATGTGCAAGGGGTCTTGTTACTTTACTAACATGCTTAACCCTTCTTTGCCTAGTGATTTTGTTGTGCTTTTGCAAGAGTTTGAACATTTATTTTCCGAGGAGATGCCTAGTAGTTTGCCACCACTTAGAGGGATTGAACACAAGATTGACTTCATTCCTGGCGCGCCCATTCCAAACCGACCAGCTTATAGGACTAATCCAAAGGAGGCTGAAGAGATACAAAGGCAAGTAAGTGAACTCCTTGCTAAAGGGTATGCTATAAACAAGATAACTATAAAGTATAGGCATCCAATTCCCAGATTAGATGATATGCTTGATGAATTGCATGGATGTAGTCTTTTTACTAAGATTGATTTAAAATCGGGTTATCATCAAATTCGCATGCATATTGGGGATGAGTGGAAAACAGCTTTTAAAACCAAGTATGGTCTTTATGAATGGTTGGTTATGCCTTTTGGATTAACTAATGCACCTAGTACATTCATGAGACTAATGAATCATGTCTTACGAGAATACTTAGTTTCATCTAATGGTGTTGAGGTTGATGAGGAGAAAGTGAAGGCTATAAAAGATTGGCCTACTCCGAAAAATGTAAGTGAGGTAAGAAGTTTTCATGGTCTTGCAAGTTTCTACCGTAGGTTCATTAAAAATTTTAGTACAATTGCTTCACCCTTGAATGAACTTGTTAAGAAAAATGTATCCTTTATATGGGAAAAAGATCAAGAACTTGCTTTTAATACTTTGAAAGAAAAATTGAGTTCTGCTCCCTTGCTTGCATTACCTAATTTTGAGTCTACTTTTGAAATTGAATGTGATGCTAGTGGAGTAGGGATAGGTGCTGTATTAATGCAAAATCAAAGACCTTTAATGTTCTTTAGTGAGAAGTTGACTGGTGCATCTTTGAGGTATCCAACTTATGACAAAGAGCTTTATGCTTTGGTTCGTGCATTGCAAACCTGGCAACATTATCTTTGGCCTAAGGAGTTCATTATTCATACGGATCATGAAAGTTTAAAGCATTTGAGAGTACAAAATAAACTCAACAGACGACATGCTAAGTGGTTAGAATTTATTGAAACATTCCCGTATGTCATAAAATATAAACAAGGAAAGGAGAACATTGTAGCAGATGCTTTATCACGAAGGTATGTCCTCCTCAATACTTTGAATGCTAGGTTGTTGGGTTTTGAACACATAAAGGATTTGTATCAACATGACATGTTCTTTGCTCCTTTTGTTGAATCTTGTGAAAAAGGACTCATTGTGGATAATTACTTGTTGTTAGATGGATTTTTGTTCCGAAAAGGCAAACTTTGCATACCATCTTGTTCCATCCGTGAGCTACTTGTGAGGGAAGCTCATGGAGGTGGTTTAATGGCACACCATGGAGTTTCTAAAACTTATGATATGCTCTCTGAACATTTTTTTTGGCCTAAAATGAGACATGATGTTCATAAAGTTTGTGGTCGTTGCATAGCATGTAAACAAGCTAAGTCTAGGCTTCAACCACATGGTTTATACTCCCCATTACCAGTTCCTAATGGTCCATGGATTGATATATCAATGGATTTTGTTTTAGGTTTACCTAGGACTAGGAAAGGTTATGATAGCATTTTTGTTGTGGTTGATCGATTTAGTAAAATGGCTCATTTTATTCCTTGTCACAAAACTGATGATGCAAAACATATTGCAGACCTATTCTTTAGGGAAGTTGTACGATTGCATGGCATTCCTAAAAGCATCGTTAGTGATCGTGATGTAAAATTTTTAAGCCACTTTTGGCGTGTTTTATGGGGTAAGTTGGGAACTAAGCTAGTATATTCAANTGGAGATTTACTACTGGGGAGGCCATGGCAATTTGATCGTCGGGTAATGTATGATGGGTATGCAAATCGATACTCCTTTACTCACAACGGTAGAAAAACTACTCTTATCCCATTGTCTCCAAAAGATATATTTATTGATCATTGCAAACTTGAAAAGAAAAGGCAAGAGGCTGATGCAAAAGCAGAGATTGAAAAAGAATCAAGTGAAAAAAAGAGCTTGAGTGAAAAGCAAGAGAGTAACACTCAGCCTAGAGAAAAAAAAGAGAGAAAAGCCAAATCAGTAAGCTTGTATGTTAGATCAAGTGAGGCTAGGAATGTTTTGCTCTCTAACCAGACTATTCTTGTACTTATGTGCAAGGGGTCTTGTTACTTTACTAACATGCTTAACCCTTCTTTGCCTAGTGATTTTGTTGTGATTTTTGTTGTGCTTTTGCAAGAGTTTGAAGATTTATTTTTCGAGGAGATGCCTAGTAGTTTGCCACCACTTAGAGGGATTGAACACAAGATTGACTTCATTCCTGGCGCGCCCATTCCAAACCGACCAGCTTATAGGACTAATCCAAAGGAGGCTGAAGAGATACAAANATATGATGTTAAATGTCTTTCTTTTTTCCTCTTGATTACTATATTTTCATCTAATGGTGTTGAGGTCGATGAGGAGAAAGTGAAGGCTATAAAAGATTGGCCTACACCGAAAAATGTAAGTGAGGTAAGAAGTTTTCATGGTCTTGCAAGTTTCTACCGTAGGTTCATTAAAAATTTTAGTACAATTGCTTCACCCTTGAATGAACTTGTTAAGAAAAATGTATCCTTTATATGGGAAAAAGATCAAGAACTTGCTTTTAATACTTTGAAAGAAAAATTGAGTTCTGCTCCCTTGCTTGCATTACCTAATTTTGAGTCTACTTTTGAAATTGAATGTGATGCTAGTGGAGTAGGGATAGGTGCTGTATTAATGCAAAATCAAAGACCTTTAATGTTCTTTAGTGAGAAGTTGACTGGTGCATCTTTGAGGTATCCAACTTATGACAAAGAGCTTTATGCTTTGGTTCGTGCATTGCAAACCTGGCAACATTATCTTTGGCCTAAGGAGTTCATTATTCATACGGATCATGAAAGTTTAAAGCATTTGAGAGTACAAAATAAACTCAACAGACGACATGCTAAGTGGTTAGAATTTATTGAAACATTCCCGTATGTCATAAAATATAAACAAGGAAAGGAGAACATTGTAGCAGATGCTTTATCACGAAGGTATGTCCTCCTCAATACTTTGAATGCTAGGTTGTTGGGTTTTGAACACATAAAGGATTTGTATCAACATGACATGTTCTTTGCTCCTTTTGTTGAATCTTGTGAAAAAGGACTCATTGTGGATAATTACTTGTTGTTAGATGGATTTTTGTTCCGAAAAGGCAAACTTTGCATACCATCTTGTTCCATCCGTGAGCTACTTGTGAGGGAAGCTCATGGAGGTGGTTTAATGGCACACCATGGAGTTTCTAAAACTTATGATATGCTCTCTAAACATTTTTTTTGGCCTAAAATGAGACATGATGTTCATAAAGTTTGTGGTCGTTGCATAGCATGTAAACAAGCTAAGTCTAGGCTTCAACCACATGGTTTATACTCCCCATTACCAGTTCCTAATGGTCCATGGATTGATATATCAATGGATTTTGTTTTAGGTTTACCTAGGACTAGGAAAGGTTATGATAGCATTTTTGTTGTGGTTGATCGATTTAGTAAAATGGCTCATTTTATTCCTTGTCACAAAACTGATGATGCAAAACATATTGCAGACCTGTTCTTTAGGGAAGTTGTACGATTGCATGGCATTCCTAAAAGCATCGTTAGTGATCGTGATGTAAAATTTTTAAGCCACTTTTGGCGTGTTTTATGGGGTAAGTTGGGAACTAAGCTAGTATATTCAACTACTTGTCATCCTCAAACGGATGGACAAACTGAAGTTGTTAACAGAACCATGACTGCTATGCTTAGGGCTATTATTGATAAGAATCTTAAGACTTGGGAGGATTGTTTGCCATTTATAGAATTTGCATATAATAGGGTTGTTCATAGCACTACTAAATGCACACCTTTTGAAATTGTTTATGGCTTTAATCCTTTAACCCCTATTGACTTGTTACCCATACCGTCAAAAGAATTTGTGAATTTTGATGCAAATGCCAAGGTTGAGTTTTCTCATAAACTGCACAAGCAAGTGAAAGAACAAATTGAGAAACAAAATTCCAAGGTTGCCACCCGAATTAATAAAGGACGTAAGATTGTCATCTTCAAGCCAGGAGATTGGGTTTGGGTGCATTTCCGAAAAGAAAGATTTCCTACTCAAAGAAAATCTAAGCTTTTACCACGAGGAGATGGACCTTTTCAAGTTCTTGAGCGCATCAACGACAATGCTTATAAAATTGATTTACCAGGTAAGTACGGTGTTAGTGCAACTTTTAATGTTGTTGATTTGAGCCCTTTTGATGTAGGTGATGGCTTGGATTCGAGGACGAATCCTTCTCAAGAGGGGGAGAATGATATGAACCACGACCAAGGAATTTCCATACCTCAAGGTCCAATTACAAGGACGAGAGCCAAGAAGCTACAACAAACTTTATACAGTTATATTCAAGCTATGGTGAGCTCATCAAAGGAAATTCTAGAAGACGCTGTAGACCTCCCTTATATGTTGTGCAAAGTTGAGGTTCAAGAAAGAGATGAATTAAATGCACTTTAA

Coding sequence (CDS)

ATGGAAAATCCAGACGACAATACTAACATTACTGATGCACGATTGAGAGAAGCACAACAACGAACTATGGAAAGACTAATTCGAGGAATAGAAGAGTTGACTGATCGAATAGGAAGATTGGAGATTCAAAATCAAGCACGACAGAGGATTCCACAACCTACGCCCTCAACCGATACATATGAAGGCGACAATTCTGATCACCACGAGGATAATCCACATGCGGTTGGTCCTGGCTTGATGCGAGGGAGAGACCATGGAAGAAAGTATCATAATTTACAACAACGAGTTCCTTATGATGATAGAATTGATCGTAACGTGGGGAGCATCAAATTAAAACTTCCCAAGTTTTATGGCAAAACCGATCCAGAGGAGTACCTTCAATGGGAGAAAACGGTGGAGTCAGTGTTCAACTGCCATAATTTTAGTGATGAAAAGAAGGTACTGTTATGCATTGCTCAATTCAAACAATATGCTCAAATTTGGTGGGATAAATTGATGTCAAGTAGGAGAAGAAATCTTGAAGCACCAATTGATTCATGGGTCGAGTTCAAAGAGTCCATGAGGAAGCGTTTTGTTCCACAATATTTTCAACGGGACATGGCGCAAAAGCTTCAAGCGTTGAAACAAGGACGCAAATCTGTGGAGGATTATTACAAGGAGATGGATACATTGATGGATCGACTTGAACTCGATGAGGACATGGAGGCTCTCATGGCGCGGTTTCTTAATGGGTTAAACACAGAGATTGCAGACAAGACTGATTTACAGCCTTATTCTAATATTGAGGAGTTGTTGCACATTGCAATTAAGATCGAGAGGCAAATCCAACGAAGGTCTCAACGGTATTCTTCTAAAACTTTTCCCAATTCTACTTCTACATGGAAAAAGGATAGTAAGAACATTGATTATAAGCATAGAAATCAAGAGATTAATGAGAAGCCTCAAGCTAAATTTGAGAAAGGGGAGAGTTCTAGAACAGGGAAAGAAAAAGTAGAAAAGTCTAATGTTCGAAATAGGGATTTAAAGTGTTGGAGATGTCAAGGGGTAGGACACTATAGTAGAGATTGCCCAAATGCAAGAATTATGACCATCAAGGAGGGAGAAATTGTTACGGATGACGAGGCACATGACGACATAAATGAGGAAACTGATGAGAGTGAGGAGTTTAGTGAAGAGGACCCTACACATATATCTTTGGTTACTCGACGAGCTCTAAACACCCACATTAAGGAGGACGGCCTAGACCAAAGGGAGAACTTGTTTCAAACTCGGTGTCTTGTTCAATCTGTACCTTGTAGTGTTGTCATTGATAGCGGTAGTTGCACCAATGTTGTGAGTTCCATTCTGGTCAAAAGACTTAATTTAAAGACACAACCACATCCAAGACCCTACAAGCTTCAATGGTTGAATGATTGTGGGGAAGTACGGGTAACTCAACAAACTCTTGTTTCTTTTACAATTGGAAAATATGTTGATGATGTTTTATGTGATGTTGTATCCATGCATGTTGGAGATTTACTACTGGGGAGGCCATGGCAATTTGATCGTCGGGTAATGTATGATGGGTATGCAAATCGATACTCCTTTACTCACAACGGTAGAAAAACTACTCTTATCCCATTGTCTCCAAAAGATGTATTTATTGATCATTGCAAACTTGAAAAGAAAAGGCAAGAGGCTGATGCAAAAGCAGAGATTGAAAAAGAATCAAGTGAAAAAAAGAGCTTGAGTGAAAAGCAAGAGAGTAACACTCAGCCTAGAGAAAAAAAAGAGAGAAAAGCCAAATCAGTAAGCTTGTATGTTAGATCAAGTGAGGCTAGGAATGTTTTGCTCTCTAACCAGACTATTCTTGTACTTATGTGCAAGGGGTCTTGTTACTTTACTAACATGCTTAACCCTTCTTTGCCTAGTGATTTTGTTGTGCTTTTGCAAGAGTTTGAACATTTATTTTCCGAGGAGATGCCTAGTAGTTTGCCACCACTTAGAGGGATTGAACACAAGATTGACTTCATTCCTGGCGCGCCCATTCCAAACCGACCAGCTTATAGGACTAATCCAAAGGAGGCTGAAGAGATACAAAGGCAAGTAAGTGAACTCCTTGCTAAAGGGTATGCTATAAACAAGATAACTATAAAGTATAGGCATCCAATTCCCAGATTAGATGATATGCTTGATGAATTGCATGGATGTAGTCTTTTTACTAAGATTGATTTAAAATCGGGTTATCATCAAATTCGCATGCATATTGGGGATGAGTGGAAAACAGCTTTTAAAACCAAGTATGGTCTTTATGAATGGTTGGTTATGCCTTTTGGATTAACTAATGCACCTAGTACATTCATGAGACTAATGAATCATGTCTTACGAGAATACTTAGTTTCATCTAATGGTGTTGAGGTTGATGAGGAGAAAGTGAAGGCTATAAAAGATTGGCCTACTCCGAAAAATGTAAGTGAGGTAAGAAGTTTTCATGGTCTTGCAAGTTTCTACCGTAGGTTCATTAAAAATTTTAGTACAATTGCTTCACCCTTGAATGAACTTGTTAAGAAAAATGTATCCTTTATATGGGAAAAAGATCAAGAACTTGCTTTTAATACTTTGAAAGAAAAATTGAGTTCTGCTCCCTTGCTTGCATTACCTAATTTTGAGTCTACTTTTGAAATTGAATGTGATGCTAGTGGAGTAGGGATAGGTGCTGTATTAATGCAAAATCAAAGACCTTTAATGTTCTTTAGTGAGAAGTTGACTGGTGCATCTTTGAGGTATCCAACTTATGACAAAGAGCTTTATGCTTTGGTTCGTGCATTGCAAACCTGGCAACATTATCTTTGGCCTAAGGAGTTCATTATTCATACGGATCATGAAAGTTTAAAGCATTTGAGAGTACAAAATAAACTCAACAGACGACATGCTAAGTGGTTAGAATTTATTGAAACATTCCCGTATGTCATAAAATATAAACAAGGAAAGGAGAACATTGTAGCAGATGCTTTATCACGAAGGTATGTCCTCCTCAATACTTTGAATGCTAGGTTGTTGGGTTTTGAACACATAAAGGATTTGTATCAACATGACATGTTCTTTGCTCCTTTTGTTGAATCTTGTGAAAAAGGACTCATTGTGGATAATTACTTGTTGTTAGATGGATTTTTGTTCCGAAAAGGCAAACTTTGCATACCATCTTGTTCCATCCGTGAGCTACTTGTGAGGGAAGCTCATGGAGGTGGTTTAATGGCACACCATGGAGTTTCTAAAACTTATGATATGCTCTCTGAACATTTTTTTTGGCCTAAAATGAGACATGATGTTCATAAAGTTTGTGGTCGTTGCATAGCATGTAAACAAGCTAAGTCTAGGCTTCAACCACATGGTTTATACTCCCCATTACCAGTTCCTAATGGTCCATGGATTGATATATCAATGGATTTTGTTTTAGGTTTACCTAGGACTAGGAAAGGTTATGATAGCATTTTTGTTGTGGTTGATCGATTTAGTAAAATGGCTCATTTTATTCCTTGTCACAAAACTGATGATGCAAAACATATTGCAGACCTATTCTTTAGGGAAGTTGTACGATTGCATGGCATTCCTAAAAGCATCGTTAGTGATCGTGATGTAAAATTTTTAAGCCACTTTTGGCGTGTTTTATGGGGTAAGTTGGGAACTAAGCTAGTATATTCAANTGGAGATTTACTACTGGGGAGGCCATGGCAATTTGATCGTCGGGTAATGTATGATGGGTATGCAAATCGATACTCCTTTACTCACAACGGTAGAAAAACTACTCTTATCCCATTGTCTCCAAAAGATATATTTATTGATCATTGCAAACTTGAAAAGAAAAGGCAAGAGGCTGATGCAAAAGCAGAGATTGAAAAAGAATCAAGTGAAAAAAAGAGCTTGAGTGAAAAGCAAGAGAGTAACACTCAGCCTAGAGAAAAAAAAGAGAGAAAAGCCAAATCAGTAAGCTTGTATGTTAGATCAAGTGAGGCTAGGAATGTTTTGCTCTCTAACCAGACTATTCTTGTACTTATGTGCAAGGGGTCTTGTTACTTTACTAACATGCTTAACCCTTCTTTGCCTAGTGATTTTGTTGTGATTTTTGTTGTGCTTTTGCAAGAGTTTGAAGATTTATTTTTCGAGGAGATGCCTAGTAGTTTGCCACCACTTAGAGGGATTGAACACAAGATTGACTTCATTCCTGGCGCGCCCATTCCAAACCGACCAGCTTATAGGACTAATCCAAAGGAGGCTGAAGAGATACAAANATATGATGTTAAATGTCTTTCTTTTTTCCTCTTGATTACTATATTTTCATCTAATGGTGTTGAGGTCGATGAGGAGAAAGTGAAGGCTATAAAAGATTGGCCTACACCGAAAAATGTAAGTGAGGTAAGAAGTTTTCATGGTCTTGCAAGTTTCTACCGTAGGTTCATTAAAAATTTTAGTACAATTGCTTCACCCTTGAATGAACTTGTTAAGAAAAATGTATCCTTTATATGGGAAAAAGATCAAGAACTTGCTTTTAATACTTTGAAAGAAAAATTGAGTTCTGCTCCCTTGCTTGCATTACCTAATTTTGAGTCTACTTTTGAAATTGAATGTGATGCTAGTGGAGTAGGGATAGGTGCTGTATTAATGCAAAATCAAAGACCTTTAATGTTCTTTAGTGAGAAGTTGACTGGTGCATCTTTGAGGTATCCAACTTATGACAAAGAGCTTTATGCTTTGGTTCGTGCATTGCAAACCTGGCAACATTATCTTTGGCCTAAGGAGTTCATTATTCATACGGATCATGAAAGTTTAAAGCATTTGAGAGTACAAAATAAACTCAACAGACGACATGCTAAGTGGTTAGAATTTATTGAAACATTCCCGTATGTCATAAAATATAAACAAGGAAAGGAGAACATTGTAGCAGATGCTTTATCACGAAGGTATGTCCTCCTCAATACTTTGAATGCTAGGTTGTTGGGTTTTGAACACATAAAGGATTTGTATCAACATGACATGTTCTTTGCTCCTTTTGTTGAATCTTGTGAAAAAGGACTCATTGTGGATAATTACTTGTTGTTAGATGGATTTTTGTTCCGAAAAGGCAAACTTTGCATACCATCTTGTTCCATCCGTGAGCTACTTGTGAGGGAAGCTCATGGAGGTGGTTTAATGGCACACCATGGAGTTTCTAAAACTTATGATATGCTCTCTAAACATTTTTTTTGGCCTAAAATGAGACATGATGTTCATAAAGTTTGTGGTCGTTGCATAGCATGTAAACAAGCTAAGTCTAGGCTTCAACCACATGGTTTATACTCCCCATTACCAGTTCCTAATGGTCCATGGATTGATATATCAATGGATTTTGTTTTAGGTTTACCTAGGACTAGGAAAGGTTATGATAGCATTTTTGTTGTGGTTGATCGATTTAGTAAAATGGCTCATTTTATTCCTTGTCACAAAACTGATGATGCAAAACATATTGCAGACCTGTTCTTTAGGGAAGTTGTACGATTGCATGGCATTCCTAAAAGCATCGTTAGTGATCGTGATGTAAAATTTTTAAGCCACTTTTGGCGTGTTTTATGGGGTAAGTTGGGAACTAAGCTAGTATATTCAACTACTTGTCATCCTCAAACGGATGGACAAACTGAAGTTGTTAACAGAACCATGACTGCTATGCTTAGGGCTATTATTGATAAGAATCTTAAGACTTGGGAGGATTGTTTGCCATTTATAGAATTTGCATATAATAGGGTTGTTCATAGCACTACTAAATGCACACCTTTTGAAATTGTTTATGGCTTTAATCCTTTAACCCCTATTGACTTGTTACCCATACCGTCAAAAGAATTTGTGAATTTTGATGCAAATGCCAAGGTTGAGTTTTCTCATAAACTGCACAAGCAAGTGAAAGAACAAATTGAGAAACAAAATTCCAAGGTTGCCACCCGAATTAATAAAGGACGTAAGATTGTCATCTTCAAGCCAGGAGATTGGGTTTGGGTGCATTTCCGAAAAGAAAGATTTCCTACTCAAAGAAAATCTAAGCTTTTACCACGAGGAGATGGACCTTTTCAAGTTCTTGAGCGCATCAACGACAATGCTTATAAAATTGATTTACCAGGTAAGTACGGTGTTAGTGCAACTTTTAATGTTGTTGATTTGAGCCCTTTTGATGTAGGTGATGGCTTGGATTCGAGGACGAATCCTTCTCAAGAGGGGGAGAATGATATGAACCACGACCAAGGAATTTCCATACCTCAAGGTCCAATTACAAGGACGAGAGCCAAGAAGCTACAACAAACTTTATACAGTTATATTCAAGCTATGGTGAGCTCATCAAAGGAAATTCTAGAAGACGCTGTAGACCTCCCTTATATGTTGTGCAAAGTTGAGGTTCAAGAAAGAGATGAATTAAATGCACTTTAA
BLAST of CmoCh11G012300 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 375.2 bits (962), Expect = 4.9e-102
Identity = 231/647 (35.70%), Postives = 343/647 (53.01%), Query Frame = 1

Query: 1447 EEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQE 1506
            + K  AI+D+PTPK V + + F G+ ++YRRFI N S IA P+   +       W + Q+
Sbjct: 806  QHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQD 865

Query: 1507 LAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVL--MQNQRPLM----FFSEKL 1566
             A + LK+ L ++P+L   N ++ + +  DAS  GIGAVL  + N+  L+    +FS+ L
Sbjct: 866  KAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSL 925

Query: 1567 TGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLE 1626
              A   YP  + EL  +++AL  +++ L  K F + TDH SL  L+ +N+  RR  +WL+
Sbjct: 926  ESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLD 985

Query: 1627 FIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFE-----------------HI 1686
             + T+ + ++Y  G +N+VADA+SR    +    +R +  E                 H+
Sbjct: 986  DLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSDPLCSAVLIHM 1045

Query: 1687 KDLYQHDMF------FAPFVESCEKG-LIVDNYLLLDGFLFRKGKLCIPSCSIRELLVRE 1746
            K+L QH++       F  + +  E       NY L D  ++ + +L +P    +  ++R 
Sbjct: 1046 KELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVP-IKQQNAVMRL 1105

Query: 1747 AHGGGLMA-HHGVSKTYDMLSKHFFWPKMRHDVHKVCGRCIACKQAKS-RLQPHGLYSPL 1806
             H   L   H GV+ T   +S  ++WPK++H + +    C+ C+  KS R + HGL  PL
Sbjct: 1106 YHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPL 1165

Query: 1807 PVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFRE 1866
            P+  G W+DISMDFV GLP T    + I VVVDRFSK AHFI   KT DA  + DL FR 
Sbjct: 1166 PIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRY 1225

Query: 1867 VVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAML 1926
            +   HG P++I SDRDV+  +  ++ L  +LG K   S+  HPQTDGQ+E   +T+  +L
Sbjct: 1226 IFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLL 1285

Query: 1927 RAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNF 1986
            RA    N++ W   LP IEF YN     T   +PFEI  G+ P TP     I S + VN 
Sbjct: 1286 RAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP----AIKSDDEVNA 1345

Query: 1987 DANAKVEFSHKLHK---QVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPT 2046
             +   VE +  L     Q KEQ+E    ++ T  N+ RK ++   GD V VH R   F  
Sbjct: 1346 RSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVH-RDAYFKK 1405

Query: 2047 QRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPF 2059
                K+     GPF+V+++INDNAY++DL          NV  L  F
Sbjct: 1406 GAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLKKF 1444

BLAST of CmoCh11G012300 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 372.9 bits (956), Expect = 2.4e-101
Identity = 227/629 (36.09%), Postives = 338/629 (53.74%), Query Frame = 1

Query: 1447 EEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQE 1506
            + K  AI+D+PTPK V + + F G+ ++YRRFI N S IA P+   +       W + Q+
Sbjct: 832  QHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQD 891

Query: 1507 LAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVL--MQNQRPLM----FFSEKL 1566
             A   LK  L ++P+L   N ++ + +  DAS  GIGAVL  + N+  L+    +FS+ L
Sbjct: 892  KAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSL 951

Query: 1567 TGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLE 1626
              A   YP  + EL  +++AL  +++ L  K F + TDH SL  L+ +N+  RR  +WL+
Sbjct: 952  ESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLD 1011

Query: 1627 FIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFE-----------------HI 1686
             + T+ + ++Y  G +N+VADA+SR    +    +R +  E                 H+
Sbjct: 1012 DLATYDFTLEYLAGPKNVVADAISRAIYTITPETSRPIDTESWKSYYKSDPLCSAVLIHM 1071

Query: 1687 KDLYQHDMF------FAPFVESCEKG-LIVDNYLLLDGFLFRKGKLCIPSCSIRELLVRE 1746
            K+L QH++       F  + +  E       NY L D  ++ + +L +P    +  ++R 
Sbjct: 1072 KELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVP-IKQQNAVMRL 1131

Query: 1747 AHGGGLMA-HHGVSKTYDMLSKHFFWPKMRHDVHKVCGRCIACKQAKS-RLQPHGLYSPL 1806
             H   L   H GV+ T   +S  ++WPK++H + +    C+ C+  KS R + HGL  PL
Sbjct: 1132 YHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPL 1191

Query: 1807 PVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFRE 1866
            P+  G W+DISMDFV GLP T    + I VVVDRFSK AHFI   KT DA  + DL FR 
Sbjct: 1192 PIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRY 1251

Query: 1867 VVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAML 1926
            +   HG P++I SDRDV+  +  ++ L  +LG K   S+  HPQTDGQ+E   +T+  +L
Sbjct: 1252 IFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLL 1311

Query: 1927 RAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNF 1986
            RA +  N++ W   LP IEF YN     T   +PFEI  G+ P TP     I S + VN 
Sbjct: 1312 RAYVSTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP----AIKSDDEVNA 1371

Query: 1987 DANAKVEFSHKLHK---QVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPT 2041
             +   VE +  L     Q KEQ+E    ++ T  N+ RK ++   GD V VH R   F  
Sbjct: 1372 RSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVH-RDAYFKK 1431

BLAST of CmoCh11G012300 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 7.1e-93
Identity = 213/652 (32.67%), Postives = 337/652 (51.69%), Query Frame = 1

Query: 1439 SSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVS 1498
            S  G    +E +  +  W  PKN  E+R F G  ++ R+FI   S +  PLN L+KK+V 
Sbjct: 616  SEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVR 675

Query: 1499 FIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQR-----PL 1558
            + W   Q  A   +K+ L S P+L   +F     +E DAS V +GAVL Q        P+
Sbjct: 676  WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735

Query: 1559 MFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHESLKHLRVQNKL 1618
             ++S K++ A L Y   DKE+ A++++L+ W+HYL    + F I TDH +L   R+ N+ 
Sbjct: 736  GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG-RITNES 795

Query: 1619 ---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR---------------RYVLLNTL 1678
               N+R A+W  F++ F + I Y+ G  N +ADALSR                   +N +
Sbjct: 796  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQI 855

Query: 1679 NARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGKLCIPS-CSIRE 1738
            +        +   Y +D      + + +K  + +N  L DG L   K ++ +P+   +  
Sbjct: 856  SITDDFKNQVVTEYTNDTKLLNLLNNEDKR-VEENIQLKDGLLINSKDQILLPNDTQLTR 915

Query: 1739 LLVREAHGGGLMAHHGVSKTYDMLSKHFFWPKMRHDVHKVCGRCIACKQAKSRL-QPHGL 1798
             ++++ H  G + H G+    +++ + F W  +R  + +    C  C+  KSR  +P+G 
Sbjct: 916  TIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGP 975

Query: 1799 YSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADL 1858
              P+P    PW  +SMDF+  LP +  GY+++FVVVDRFSKMA  +PC K+  A+  A +
Sbjct: 976  LQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARM 1035

Query: 1859 FFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTM 1918
            F + V+   G PK I++D D  F S  W+    K    + +S    PQTDGQTE  N+T+
Sbjct: 1036 FDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1095

Query: 1919 TAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNP-LTPIDLLPIPSK 1978
              +LR +   +  TW D +  ++ +YN  +HS T+ TPFEIV+ ++P L+P++L     K
Sbjct: 1096 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDK 1155

Query: 1979 EFVNFDANAKVEFSHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPGDWVWVHFRKER 2038
               N     +V       + VKE +   N K+    + K ++I  F+PGD V V   K  
Sbjct: 1156 TDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTG 1215

Query: 2039 FPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPG--KYGVSATFNVVDLSPF 2059
            F   + +KL P   GPF VL++   N Y++DLP   K+  S+TF+V  L  +
Sbjct: 1216 F-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

BLAST of CmoCh11G012300 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 7.1e-93
Identity = 213/652 (32.67%), Postives = 337/652 (51.69%), Query Frame = 1

Query: 1439 SSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVS 1498
            S  G    +E +  +  W  PKN  E+R F G  ++ R+FI   S +  PLN L+KK+V 
Sbjct: 616  SEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVR 675

Query: 1499 FIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQR-----PL 1558
            + W   Q  A   +K+ L S P+L   +F     +E DAS V +GAVL Q        P+
Sbjct: 676  WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735

Query: 1559 MFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHESLKHLRVQNKL 1618
             ++S K++ A L Y   DKE+ A++++L+ W+HYL    + F I TDH +L   R+ N+ 
Sbjct: 736  GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG-RITNES 795

Query: 1619 ---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR---------------RYVLLNTL 1678
               N+R A+W  F++ F + I Y+ G  N +ADALSR                   +N +
Sbjct: 796  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQI 855

Query: 1679 NARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGKLCIPS-CSIRE 1738
            +        +   Y +D      + + +K  + +N  L DG L   K ++ +P+   +  
Sbjct: 856  SITDDFKNQVVTEYTNDTKLLNLLNNEDKR-VEENIQLKDGLLINSKDQILLPNDTQLTR 915

Query: 1739 LLVREAHGGGLMAHHGVSKTYDMLSKHFFWPKMRHDVHKVCGRCIACKQAKSRL-QPHGL 1798
             ++++ H  G + H G+    +++ + F W  +R  + +    C  C+  KSR  +P+G 
Sbjct: 916  TIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGP 975

Query: 1799 YSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADL 1858
              P+P    PW  +SMDF+  LP +  GY+++FVVVDRFSKMA  +PC K+  A+  A +
Sbjct: 976  LQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARM 1035

Query: 1859 FFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTM 1918
            F + V+   G PK I++D D  F S  W+    K    + +S    PQTDGQTE  N+T+
Sbjct: 1036 FDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1095

Query: 1919 TAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNP-LTPIDLLPIPSK 1978
              +LR +   +  TW D +  ++ +YN  +HS T+ TPFEIV+ ++P L+P++L     K
Sbjct: 1096 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDK 1155

Query: 1979 EFVNFDANAKVEFSHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPGDWVWVHFRKER 2038
               N     +V       + VKE +   N K+    + K ++I  F+PGD V V   K  
Sbjct: 1156 TDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTG 1215

Query: 2039 FPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPG--KYGVSATFNVVDLSPF 2059
            F   + +KL P   GPF VL++   N Y++DLP   K+  S+TF+V  L  +
Sbjct: 1216 F-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

BLAST of CmoCh11G012300 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 7.1e-93
Identity = 213/652 (32.67%), Postives = 337/652 (51.69%), Query Frame = 1

Query: 1439 SSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVS 1498
            S  G    +E +  +  W  PKN  E+R F G  ++ R+FI   S +  PLN L+KK+V 
Sbjct: 616  SEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVR 675

Query: 1499 FIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQR-----PL 1558
            + W   Q  A   +K+ L S P+L   +F     +E DAS V +GAVL Q        P+
Sbjct: 676  WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735

Query: 1559 MFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHESLKHLRVQNKL 1618
             ++S K++ A L Y   DKE+ A++++L+ W+HYL    + F I TDH +L   R+ N+ 
Sbjct: 736  GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIG-RITNES 795

Query: 1619 ---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR---------------RYVLLNTL 1678
               N+R A+W  F++ F + I Y+ G  N +ADALSR                   +N +
Sbjct: 796  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQI 855

Query: 1679 NARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGKLCIPS-CSIRE 1738
            +        +   Y +D      + + +K  + +N  L DG L   K ++ +P+   +  
Sbjct: 856  SITDDFKNQVVTEYTNDTKLLNLLNNEDKR-VEENIQLKDGLLINSKDQILLPNDTQLTR 915

Query: 1739 LLVREAHGGGLMAHHGVSKTYDMLSKHFFWPKMRHDVHKVCGRCIACKQAKSRL-QPHGL 1798
             ++++ H  G + H G+    +++ + F W  +R  + +    C  C+  KSR  +P+G 
Sbjct: 916  TIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGP 975

Query: 1799 YSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADL 1858
              P+P    PW  +SMDF+  LP +  GY+++FVVVDRFSKMA  +PC K+  A+  A +
Sbjct: 976  LQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARM 1035

Query: 1859 FFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTM 1918
            F + V+   G PK I++D D  F S  W+    K    + +S    PQTDGQTE  N+T+
Sbjct: 1036 FDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTV 1095

Query: 1919 TAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNP-LTPIDLLPIPSK 1978
              +LR +   +  TW D +  ++ +YN  +HS T+ TPFEIV+ ++P L+P++L     K
Sbjct: 1096 EKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDK 1155

Query: 1979 EFVNFDANAKVEFSHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPGDWVWVHFRKER 2038
               N     +V       + VKE +   N K+    + K ++I  F+PGD V V   K  
Sbjct: 1156 TDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTG 1215

Query: 2039 FPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPG--KYGVSATFNVVDLSPF 2059
            F   + +KL P   GPF VL++   N Y++DLP   K+  S+TF+V  L  +
Sbjct: 1216 F-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

BLAST of CmoCh11G012300 vs. TrEMBL
Match: A0A151UF56_CAJCA (Transposon Ty3-I Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_049062 PE=4 SV=1)

HSP 1 Score: 971.8 bits (2511), Expect = 1.3e-279
Identity = 452/645 (70.08%), Postives = 541/645 (83.88%), Query Frame = 1

Query: 1437 IFSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 1496
            + SS GV+VDEEK++AI++WPTPKNVSEVRSFHGLASFYRRF+K+FST+A+PLNE+VKK+
Sbjct: 151  VVSSKGVQVDEEKIRAIQEWPTPKNVSEVRSFHGLASFYRRFVKDFSTLAAPLNEIVKKH 210

Query: 1497 VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFF 1556
            V F W + QE AF+ LK KL++AP+LALPNF  +FEIECDAS VGIGAVLMQ   P+ +F
Sbjct: 211  VGFKWGEKQEKAFSELKHKLTNAPILALPNFAKSFEIECDASNVGIGAVLMQEGHPIAYF 270

Query: 1557 SEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHA 1616
            SEKL GA+L YPTYDKELYALVRAL+TWQHYL PKEF+IH+DHESLK+L+ Q KLN+RHA
Sbjct: 271  SEKLNGAALNYPTYDKELYALVRALRTWQHYLLPKEFVIHSDHESLKYLKGQGKLNKRHA 330

Query: 1617 KWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPF 1676
            KW+EF+E FPYVIK+K+GK N+VADALSRR+ LL+ L  +L G E +KD+Y HD+ FA  
Sbjct: 331  KWVEFLEQFPYVIKHKKGKGNVVADALSRRHNLLSMLETKLFGLESLKDMYMHDVDFAEN 390

Query: 1677 VESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLS 1736
              +CEK    + Y   +GFLF+  +LC+P CSIRELLV E+H GGLM H GV KT ++L 
Sbjct: 391  FAACEK-FSENGYYRHNGFLFKANRLCVPKCSIRELLVSESHEGGLMGHFGVQKTLEILQ 450

Query: 1737 KHFFWPKMRHDVHKVCGRCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTR 1796
            +HF+WP M+HDVHK C  CI CK+AKS+++PHGLY+PLPVP+ PWIDISMDFVLGLPRT+
Sbjct: 451  EHFYWPHMKHDVHKFCDHCIVCKKAKSKVKPHGLYTPLPVPDFPWIDISMDFVLGLPRTK 510

Query: 1797 KGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSH 1856
             G DSIFVVVDRFSKMAHFIPC K +DA H+ADLFFREVVRLHG+P+SIVSDRD KFLSH
Sbjct: 511  NGKDSIFVVVDRFSKMAHFIPCKKVNDACHVADLFFREVVRLHGLPRSIVSDRDTKFLSH 570

Query: 1857 FWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAY 1916
            FWR LWGKLGTKL++STTCHPQTDGQTEVVNRT+  +LR ++ KN+K WE+ LP +EFAY
Sbjct: 571  FWRTLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGTLLRTVLKKNIKFWEEHLPHVEFAY 630

Query: 1917 NRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPS-KEFVNFDANAKVEFSHKLHKQVKEQIE 1976
            NR VHSTTKC+PFEIVYGFNPLTP+DLLP+P+  EF + DA AK E+  KLH+QVK QIE
Sbjct: 631  NRAVHSTTKCSPFEIVYGFNPLTPLDLLPMPNISEFKHKDAQAKAEYVKKLHEQVKAQIE 690

Query: 1977 KQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNA 2036
            K+      + NKGRK VIF+PGDWVWVH RKERFP QRKSKL PRGDGPFQVLE+INDNA
Sbjct: 691  KKIESYVKQANKGRKKVIFEPGDWVWVHMRKERFPEQRKSKLQPRGDGPFQVLEKINDNA 750

Query: 2037 YKIDLPGKYGVSATFNVVDLSPFDVGDG-LDSRTNPSQEGENDMN 2080
            YKIDLPG+YGVS++FNV DL+ FD GD  +  R N +QEGEND++
Sbjct: 751  YKIDLPGEYGVSSSFNVADLTHFDAGDEFIALRKNVAQEGENDVD 794

BLAST of CmoCh11G012300 vs. TrEMBL
Match: Q8L7J3_MAIZE (Gag-pol polyprotein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 942.2 bits (2434), Expect = 1.1e-270
Identity = 443/684 (64.77%), Postives = 537/684 (78.51%), Query Frame = 1

Query: 1437 IFSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 1496
            + +  G+EVD+ KV+AI  WP PK +++VRSF GLA FYRRF+K+FSTIA+PLNEL KK 
Sbjct: 923  VVTPQGIEVDQAKVEAIHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKG 982

Query: 1497 VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFF 1556
            V F W K QE AFN LK+KL+ APLL LP+F  TFE+ECDASG+G+G VL+Q  +P+ +F
Sbjct: 983  VHFSWGKVQEHAFNVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYF 1042

Query: 1557 SEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHA 1616
            SEKL+G+ L Y TYDKELYALVR L+TWQHYLWPKEF+IH+DHESLKH+R Q KLNRRHA
Sbjct: 1043 SEKLSGSVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHA 1102

Query: 1617 KWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPF 1676
            KW+EFIE+FPYVIK+K+GKENI+ADALSRRY LLN L+ ++ G E IKD Y HD  F   
Sbjct: 1103 KWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIKDQYVHDADFKDV 1162

Query: 1677 VESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLS 1736
            +  C+ G   + Y++ DGF+FR  KLCIP+ S+R LL++EAHGGGLM H G  KT D+L+
Sbjct: 1163 LLHCKDGKGWNKYIVSDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDILA 1222

Query: 1737 KHFFWPKMRHDVHKVCGRCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTR 1796
             HFFWPKMR DV ++  RC  C++AKSRL PHGLY PLPVP+ PW DISMDFVLGLPRTR
Sbjct: 1223 GHFFWPKMRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTR 1282

Query: 1797 KGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSH 1856
            KG DS+FVVVDRFSKMAHFIPCHKTDDA HIADLFFRE+VRLHG+P +IVSDRD KFLSH
Sbjct: 1283 KGRDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSH 1342

Query: 1857 FWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAY 1916
            FWR LW KLGTKL++STTCHPQTDGQTEVVNRT++ MLRA++ KN+K WEDCLP IEFAY
Sbjct: 1343 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAY 1402

Query: 1917 NRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFSHKLHKQVKEQIEK 1976
            NR +HSTTK  PF+IVYG  P  PIDL+P+PS E +NFDA  + E   KLH+  KE IE+
Sbjct: 1403 NRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIER 1462

Query: 1977 QNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAY 2036
             N++     +KGRK + F+PGD VW+H RKERFP  RKSKLLPR DGPF+VLE+INDNAY
Sbjct: 1463 MNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAY 1522

Query: 2037 KIDLPGKYGVSATFNVVDLSPFDVGD--GLDSRTNPSQEGENDMN-HDQGISIP-----Q 2096
            ++DLP  +GVS TFN+ DL P+ +G+   L+SRT   QEGEND + H    SIP      
Sbjct: 1523 RLDLPADFGVSPTFNIADLKPY-LGEEVELESRTTQMQEGENDEDIHTTDASIPIQVPIS 1582

Query: 2097 GPITRTRAKKLQQTLYSYIQAMVS 2113
            GPITR RA++L   + + + +  S
Sbjct: 1583 GPITRARARQLNHQVITLLSSCPS 1605

BLAST of CmoCh11G012300 vs. TrEMBL
Match: Q9LQH2_ARATH (F15O4.13 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 941.4 bits (2432), Expect = 1.9e-270
Identity = 436/642 (67.91%), Postives = 528/642 (82.24%), Query Frame = 1

Query: 1437 IFSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 1496
            + S++GV+VDEEKVKAI++WP+PK+V EVRSFHGLA FYRRF+K+FST+A+PL E++KKN
Sbjct: 1112 VVSTDGVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKN 1171

Query: 1497 VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFF 1556
            V F WE+ QE AF  LKEKL+ AP+L+LP+F  TFEIECDASGVGIG VLMQ+++P+ +F
Sbjct: 1172 VGFKWEQAQEDAFQALKEKLTHAPVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYF 1231

Query: 1557 SEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHA 1616
            SEKL GA+L YPTYDKELYALVRALQT QHYLWPKEF+IHTDHESLKHL+ Q KLN+RHA
Sbjct: 1232 SEKLGGATLNYPTYDKELYALVRALQTGQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHA 1291

Query: 1617 KWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPF 1676
            +W+EFIETFPYVIKYK+GK+N+VADALSRRYVLL++L+A+LLGFEHIK LY +D  F   
Sbjct: 1292 RWVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSLDAKLLGFEHIKSLYANDSDFEKI 1351

Query: 1677 VESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLS 1736
              SCEK      Y   DGFLF   +LCIP+ S+REL +REAHGGGLM H GVSKT  ++ 
Sbjct: 1352 YSSCEK-FAFGKYYRHDGFLFYDNRLCIPNSSLRELFIREAHGGGLMGHFGVSKTIKVMQ 1411

Query: 1737 KHFFWPKMRHDVHKVCGRCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTR 1796
             HF WP M+ DV ++C RC  CKQAK++ QPHGLY+PLP+P+ PW DISMDFV+GLPRTR
Sbjct: 1412 DHFHWPHMKRDVERICERCPTCKQAKAKSQPHGLYTPLPIPSHPWNDISMDFVVGLPRTR 1471

Query: 1797 KGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSH 1856
             G DSIFVVVDRFSKMAHFIPCHKTDDA HIA+LFFREVVRLHG+PK+IVSDRD KFLS+
Sbjct: 1472 TGKDSIFVVVDRFSKMAHFIPCHKTDDAIHIANLFFREVVRLHGMPKTIVSDRDTKFLSY 1531

Query: 1857 FWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAY 1916
            FW+ LW KLGTKL++STTCHPQTDGQTEVVNRT++ +LRA+I KNLKTWEDCLP +EFAY
Sbjct: 1532 FWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAY 1591

Query: 1917 NRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFSHKLHKQVKEQIEK 1976
            N  +HS +K +PF+IVYGFNP TP+DL+P+P  E V+ D   K E   ++H+Q K+ IE+
Sbjct: 1592 NHSMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAELVQQIHEQAKKNIEE 1651

Query: 1977 QNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAY 2036
            +  + A   NK RK VIF  GD VW+H RKERFP +RKSKL+ R DGPF+VL+RIN+NAY
Sbjct: 1652 KTKQYAKHANKSRKEVIFNEGDLVWIHLRKERFPKERKSKLMSRIDGPFKVLKRINNNAY 1711

Query: 2037 KIDLPGKYGVSATFNVVDLSPFDVGDGLDSRTNPSQEGENDM 2079
             +DL GKY VS +FNV DL PF + D  D R+NP Q GE+D+
Sbjct: 1712 SLDLQGKYNVSNSFNVADLFPF-IADNTDLRSNPFQLGEDDV 1751

BLAST of CmoCh11G012300 vs. TrEMBL
Match: A4K7M3_ORYSJ (Putative polyprotein OS=Oryza sativa subsp. japonica PE=4 SV=1)

HSP 1 Score: 936.8 bits (2420), Expect = 4.7e-269
Identity = 441/694 (63.54%), Postives = 541/694 (77.95%), Query Frame = 1

Query: 1437 IFSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 1496
            + S  G++VDE KVKAIKDWPTP+NVS+V+SF GLA FYRRF++ FSTIA+PLNEL KK 
Sbjct: 923  VVSGLGIQVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKG 982

Query: 1497 VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFF 1556
            V+F W + QE AF  LK++LS  PLL LP+F  TFE+ECDASG+GIG VLMQN +P+ +F
Sbjct: 983  VAFQWGEPQEKAFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYF 1042

Query: 1557 SEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHA 1616
            SEKL GA L Y  YDKELYALVRAL+TWQHYLWPKEF+IH+DHE+LK+L+ Q KLNRRHA
Sbjct: 1043 SEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHA 1102

Query: 1617 KWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPF 1676
            KW+EFIETFPYV+KYK+GKENIVADALSR+ VLLN L  ++ G E IK+LY  D+ F+  
Sbjct: 1103 KWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSEP 1162

Query: 1677 VESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLS 1736
               C  G   + Y + DGFLFR  KLC+P CS+R LL++E H GGLM H G  KTYDML+
Sbjct: 1163 YAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLA 1222

Query: 1737 KHFFWPKMRHDVHKVCGRCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTR 1796
             HF+WPKMR DV ++  RC+ C +AKS+L PHGLY+PLPVP+ PW DISMDFVLGLPRT+
Sbjct: 1223 DHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTK 1282

Query: 1797 KGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSH 1856
            +G DSIFVVVDRFSKMAHFIPCHK+DDA HIA LFF E+VRLHG+PK+IVSDRD KFLS+
Sbjct: 1283 RGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSY 1342

Query: 1857 FWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAY 1916
            FW+ LW KLGT+L++STTCHPQTDGQTEVVNRT++ +LRA+I KNLK WE+CLP +EFAY
Sbjct: 1343 FWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAY 1402

Query: 1917 NRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFSHKLHKQVKEQIEK 1976
            NR VHSTT   PFE+VYGF PL+PIDLLP+P +E  + +A+ +  +  K+H++ KE IEK
Sbjct: 1403 NRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEK 1462

Query: 1977 QNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAY 2036
            ++   A   NK RK V F+PGD VWVH RK+RFP +RKSKL+PRGDGPF+VL +INDNAY
Sbjct: 1463 RSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAY 1522

Query: 2037 KIDLPGKYGVSATFNVVDLSP-FDVGDGLDSRTNPSQEGEND-----MNHDQGISIP--- 2096
            KI+LP  YGVS+TFNV DL+P F + D   SR+ P QEGE+D     ++       P   
Sbjct: 1523 KIELPEDYGVSSTFNVADLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSSTKQPSSN 1582

Query: 2097 -----QGPITRTRAKKLQQTLYSYIQAMVSSSKE 2117
                 QGP+TR+RAKKLQ  + S++     S+ E
Sbjct: 1583 TKDTIQGPLTRSRAKKLQVQVNSFLTDFNFSTSE 1616

BLAST of CmoCh11G012300 vs. TrEMBL
Match: B5G4Y0_TRIMO (Putative gag-pol polyprotein OS=Triticum monococcum subsp. aegilopoides GN=gag-pol PE=4 SV=1)

HSP 1 Score: 926.4 bits (2393), Expect = 6.3e-266
Identity = 429/678 (63.27%), Postives = 534/678 (78.76%), Query Frame = 1

Query: 1437 IFSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 1496
            + +  G+EVD+ K++AI+ WP PK V++VRSF GLA FYRRF+++FSTIA+PLNE+ KK+
Sbjct: 964  VVTPQGIEVDKAKIEAIESWPHPKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKD 1023

Query: 1497 VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFF 1556
            V F+W   QE AF  LK+KL+ APLL LPNF  TFE+ECDASG+G+G VL+Q+ +P+ +F
Sbjct: 1024 VPFVWGTAQEEAFTVLKDKLTYAPLLQLPNFNKTFELECDASGIGLGGVLLQDGKPVAYF 1083

Query: 1557 SEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHA 1616
            SEK +G SL Y TYDKELYALVR L+TWQHYLWPKEF+IH+DHESLKH++ Q KLNRRHA
Sbjct: 1084 SEKFSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHA 1143

Query: 1617 KWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPF 1676
            KW+EFIETFPYVIK+K+GKEN++ADALSRRY +L+ L+ ++ G E IKD Y HD  F   
Sbjct: 1144 KWVEFIETFPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDAEFKDV 1203

Query: 1677 VESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLS 1736
            +++C++G   + ++L DGF+FR  KLCIP+ S+R LL++EAHGGGLM H GV KT D+L+
Sbjct: 1204 LQNCKEGRTWNKFVLNDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGVKKTEDILA 1263

Query: 1737 KHFFWPKMRHDVHKVCGRCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTR 1796
             HFFWPKMR DV +   RC  C++AKSRL PHGLY PLPVP+ PW DISMDFVLGLPRT+
Sbjct: 1264 THFFWPKMRRDVERFVARCTTCQRAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTK 1323

Query: 1797 KGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSH 1856
            KG DSIFVVVDRFSKMAHFIPCHK+DDA ++ADLFFRE++RLHG+P +IVSDRD KFLSH
Sbjct: 1324 KGRDSIFVVVDRFSKMAHFIPCHKSDDAVNVADLFFREIIRLHGVPNTIVSDRDTKFLSH 1383

Query: 1857 FWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAY 1916
            FWR LW KLG KL++STTCHPQTDGQTEVVNRT++ MLRA++  N K WE+CLP IEFAY
Sbjct: 1384 FWRCLWAKLGNKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIEFAY 1443

Query: 1917 NRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFSHKLHKQVKEQIEK 1976
            NR +HSTTK  PFEIVYGF P  PIDLLP+PS E VNFDA  + E   K+H+  KE IE+
Sbjct: 1444 NRSLHSTTKMCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSELILKIHELTKENIER 1503

Query: 1977 QNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAY 2036
             N+K     +KGRK V+F PGD VW+H RK+RFP  RKSKL+PR DGPF+VLE+INDNAY
Sbjct: 1504 MNAKYKLARDKGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMPRADGPFKVLEKINDNAY 1563

Query: 2037 KIDLPGKYGVSATFNVVDLSPF-DVGDGLDSRTNPSQEGENDMNHDQGIS------IPQG 2096
            K++LP  +GVS TFN+ DL P+    D L SRT   QEGE+D + +  ++         G
Sbjct: 1564 KLELPADFGVSPTFNIADLKPYLGEEDELPSRTTSFQEGEDDEDINTIVTPTAPTVTYTG 1623

Query: 2097 PITRTRAKKLQQTLYSYI 2108
            PITR RA++L   + S++
Sbjct: 1624 PITRARARQLNYQVLSFL 1641

BLAST of CmoCh11G012300 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 6.1e-18
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1

Query: 791 YLVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKK 850
           +++S  GV  D  K++A+  WP PKN +E+R F GL  +YRRF+KN+  I  PL EL+KK
Sbjct: 37  HIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKK 96

Query: 851 NVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTF 887
           N S  W +   LAF  LK  +++ P+LALP+ +  F
Sbjct: 97  N-SLKWTEMAALAFKALKGAVTTLPVLALPDLKLPF 131

BLAST of CmoCh11G012300 vs. TAIR10
Match: AT2G15180.1 (AT2G15180.1 Zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 51.2 bits (121), Expect = 9.1e-06
Identity = 24/70 (34.29%), Postives = 36/70 (51.43%), Query Frame = 1

Query: 125 YLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWVEFK 184
           YLQWE  +   F  H+ + E K+ + + Q K  A  WWD+   +R     API +W   K
Sbjct: 119 YLQWESNMNYYFEFHSTAQEDKLSIALGQLKGSALWWWDQDEYNRWYERRAPIRTWERLK 178

Query: 185 ESMRKRFVPQ 195
            +M  ++ PQ
Sbjct: 179 WNMCAKYSPQ 188

BLAST of CmoCh11G012300 vs. TAIR10
Match: AT1G40129.1 (AT1G40129.1 unknown protein)

HSP 1 Score: 51.2 bits (121), Expect = 9.1e-06
Identity = 36/150 (24.00%), Postives = 67/150 (44.67%), Query Frame = 1

Query: 119 KTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPID 178
           ++  E+YL+WEK ++  F+  NF  E + +  ++     A  WW + +  R    E PI 
Sbjct: 85  QSRKEDYLEWEKNMDEWFSYKNFLSEMRFVCALSHLTGNAYKWWLQEVEDRLYYKEPPIT 144

Query: 179 SWVEFKESMRKRFVPQYFQRDMAQKLQA---LKQGRKSVEDYYKEMDTLMDRLELDEDME 238
            W + KE +R ++  Q   R     + A     Q ++ V   Y + + + ++   DE   
Sbjct: 145 LWRDLKEFLRNKYALQVSNRSRKVSITAQGLAAQEKEQVLAPYSKKNPIAEQQLKDE--- 204

Query: 239 ALMARFLNGLNTEIADKTDLQPYSNIEELL 266
             + + LN  N     K+  QP    +E++
Sbjct: 205 --ILKILNAYNKPKKAKSTSQPKMVTKEVV 229

BLAST of CmoCh11G012300 vs. NCBI nr
Match: gi|823145097|ref|XP_012472412.1| (PREDICTED: uncharacterized protein LOC105789586 [Gossypium raimondii])

HSP 1 Score: 1272.7 bits (3292), Expect = 0.0e+00
Identity = 644/1217 (52.92%), Postives = 852/1217 (70.01%), Query Frame = 1

Query: 46   ARQRIPQPTPSTDTYEGDNSDHHEDNPHAVGPGLMRGRDHGRKYHNLQQRVPYD-DRIDR 105
            AR+   QP  + D  EG++   H               + G      + RVP + DR D 
Sbjct: 180  ARREREQPIDNFD--EGESEGDHLS-------------EQGNPQRFQRNRVPRNRDRPDD 239

Query: 106  NVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDK 165
            N+ +IK+ +  F GK DPE YL+WEK +E VF CHN+S+ KKV L   +F  YA +WWD+
Sbjct: 240  NLKNIKMSILPFQGKNDPESYLEWEKKMELVFECHNYSENKKVKLAAIEFSDYAIVWWDQ 299

Query: 166  LMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMDTL 225
            L++SRRRN E PI +W E K  MRKRFVP Y+ R++ Q+LQ L QG +SVEDYYK+M+  
Sbjct: 300  LVTSRRRNGERPISTWAEMKAVMRKRFVPSYYHRELYQRLQNLTQGNRSVEDYYKDMEIA 359

Query: 226  MDRLELDEDMEALMARFLNGLNTEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRYSS 285
            M R +++ED EA MARFL GLN +IA+  + Q Y  + +++H+AIK+E+Q++R+     +
Sbjct: 360  MIRADVEEDREATMARFLAGLNRDIANIVEFQHYVEVMDMVHMAIKVEKQLKRKGP---T 419

Query: 286  KTFPN-STSTWKKDSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVEKSNVRNRDLKC 345
            +T+P  ST+ W + +     + +   +  KP        S+   K K E  +  +RD+KC
Sbjct: 420  QTYPTTSTNKWAQGTSKAPNRPKKPFVAAKPNQV-----SADASKNKNEAVSNHSRDIKC 479

Query: 346  WRCQGVGHYSRDCPNARIMTIKE-GEIVTDDEAHDDINEETDESEEFSEEDPTHISLVTR 405
            ++CQG GH +  CPN R+M ++  GEI ++DE  ++     +E EE        + LV +
Sbjct: 480  FKCQGRGHIASQCPNRRVMVVRSNGEIESEDEQEEEPEIPMEEGEELELPVEGEL-LVVK 539

Query: 406  RALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPR 465
            R+LN  + ++   QR+N+F TRC VQ   CS++ID GSCTNV SS+LV++L L T  HP 
Sbjct: 540  RSLNIQVAKEE-QQRDNIFHTRCHVQGKVCSLIIDGGSCTNVASSLLVEKLGLATTKHPT 599

Query: 466  PYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDG 525
            PYKLQWLND GE++VT+Q  V+F+IGKY D+V+CDVV MH G LLLGRPWQFDRRV++DG
Sbjct: 600  PYKLQWLNDGGELKVTKQARVAFSIGKYQDEVVCDVVPMHAGHLLLGRPWQFDRRVVHDG 659

Query: 526  YANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKKRQEADAKAEIEKESSEKKSLSEKQES 585
            Y NRYSF H GR  TL PL+PK V  D  K+++  +    K + +K   +KK  +++ E 
Sbjct: 660  YTNRYSFKHLGRNVTLAPLTPKQVHEDQLKMKQSIEREKEKEKNKKSEKKKKEKNDESEI 719

Query: 586  NTQPREKKERKAKS--VSLYVRSSEARNVLLSNQTILVLMCKGSCYFTNMLNPSLPSDFV 645
             T+  ++KE++ ++   S++ R  E R ++L+ Q I V M K   + TN L  +LP+  V
Sbjct: 720  KTRVTKEKEQECENEKTSVFARKREIRKLMLARQPIFVPMYKECLFETNELENTLPTPIV 779

Query: 646  VLLQEFEHLFSEEMPSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELL 705
             LLQEF  +F EE+P+ LPP+RGIEH+IDF+PGA IPNRPAYR+NP+E +E+++QV+EL+
Sbjct: 780  SLLQEFGDIFPEEVPNGLPPIRGIEHQIDFVPGAAIPNRPAYRSNPEETKELEKQVAELM 839

Query: 706  AKGY-----------------------------AINKITIKYRHPIPRLDDMLDELHGCS 765
             KGY                             AINKITIKYRHPIPRLD+MLDEL G  
Sbjct: 840  EKGYIRESLSPCAVPVLLVPKKDGSWRMCVDYRAINKITIKYRHPIPRLDNMLDELSGAQ 899

Query: 766  LFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREY 825
            LF+KIDLKSGYHQIRM  GDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMN+VLR +
Sbjct: 900  LFSKIDLKSGYHQIRMREGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNYVLRSF 959

Query: 826  LVSSNGVEVDEEKV--KAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVK 885
            +     V  D+  V  K+++D         ++    +    R+          PL  ++K
Sbjct: 960  IGRFCVVYFDDILVYSKSLED--------HIQHLRAVLEVLRK-----EFCCCPLTGIIK 1019

Query: 886  KNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLM 945
            KN  F+W  +QE +FN LKE L++APLL+LP+F  TFEIECDASG+GIGA LMQ+ RP+ 
Sbjct: 1020 KNSPFVWTDEQENSFNKLKECLTNAPLLSLPDFNKTFEIECDASGIGIGAALMQDGRPIA 1079

Query: 946  FFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRR 1005
            +FSEKL GA+L YPTYDKELYALVRAL+TWQHYLWPKEF+IH+DHE+LK+L+ Q KLN+R
Sbjct: 1080 YFSEKLNGATLNYPTYDKELYALVRALETWQHYLWPKEFVIHSDHEALKNLKGQTKLNKR 1139

Query: 1006 HAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQHDMFFA 1065
            HAKW+E++E+F YVIKYK+GKEN+VADALSRRY L+N ++++LLGFE +KDLY+ D  F 
Sbjct: 1140 HAKWVEYLESFLYVIKYKKGKENVVADALSRRYALVNLMDSKLLGFEFLKDLYKSDADFG 1199

Query: 1066 PFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDM 1125
               ESC  G   + Y   +G+LFR+GKLC+P  S+R +LV EAH GGLM H G++KT  +
Sbjct: 1200 EIYESCSHG-AGEKYFQHEGYLFREGKLCVPQSSVRNVLVEEAHSGGLMGHFGIAKTLAI 1259

Query: 1126 LSEHFFWPKMRHDVHKVCGRCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPR 1185
            L EHF+WPKM+ DV + C RCI CK+AKSR++PHGLY+PLP+P+ PW+DISMDFVLGLPR
Sbjct: 1260 LHEHFYWPKMKRDVIRKCDRCITCKKAKSRIKPHGLYTPLPIPDAPWVDISMDFVLGLPR 1319

Query: 1186 TRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFL 1227
            T++G DSIFVVVDRFSKMAHFIPC+KTDDA ++A+LFF+EVVRLHGIP++IVSDRD KFL
Sbjct: 1320 TKRGRDSIFVVVDRFSKMAHFIPCNKTDDATNVANLFFKEVVRLHGIPRTIVSDRDTKFL 1357

BLAST of CmoCh11G012300 vs. NCBI nr
Match: gi|923695255|ref|XP_013657890.1| (PREDICTED: uncharacterized protein LOC106362556 [Brassica napus])

HSP 1 Score: 1087.4 bits (2811), Expect = 0.0e+00
Identity = 587/1250 (46.96%), Postives = 785/1250 (62.80%), Query Frame = 1

Query: 5    DDNTNITDARLREAQ--QRTMERLIRGIEELTDRIGRLEIQNQARQRIPQPTPSTDTYEG 64
            DD T +   RL +    ++ ME +++ +EE  D+    + Q QA     +P  +      
Sbjct: 6    DDETFVRRNRLLQEAITKQVMEAMVKLLEEKYDQRPH-DGQGQASGSRHEPRRNRQGQRE 65

Query: 65   DNSDHHEDNPHAVGPGLMRGRDHGRKYHNLQQRVPYDDRIDRN--VGSIKLKLPKFYGKT 124
                   DN +            G +  + + R  ++ R  R   +  +KLK+  F+GK 
Sbjct: 66   HAGSEETDNFYE-----RSSHSSGSRRSSRRSRRDHEGRRHRRNELSGLKLKISPFHGKA 125

Query: 125  DPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSW 184
            DP+ YL+WEK +E VFNC ++S+ KK+ +   +F  YA  WWD+L++++RRN E PI++W
Sbjct: 126  DPDAYLEWEKKIELVFNCQHYSETKKIQVAATEFNDYALSWWDQLVTNKRRNGEFPIETW 185

Query: 185  VEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLELDEDMEALMAR 244
             E K  MRKRFVP ++ RD+ QKL+ L QG KSVE+Y++EM+ LM R  + ED EA MAR
Sbjct: 186  AEMKAVMRKRFVPSHYHRDLHQKLRLLTQGSKSVEEYFQEMELLMLRACVSEDSEATMAR 245

Query: 245  FLNGLNTEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRYSSKTFPNSTSTWKKDSKN 304
            FL GLN EI D+ ++Q Y  IEE+LH AI +E+Q++RRS    S    N   T K+D  +
Sbjct: 246  FLGGLNREIQDRVEMQHYLEIEEMLHKAILVEQQVKRRSHARGSYG-SNRYQTSKEDKPS 305

Query: 305  IDYKHRNQEINEKPQAKFEKGESSRTGKEK--VEKSNVRNRDLKCWRCQGVGHYSRDCPN 364
               +        KPQ K E   SS   K+K  VE ++ R RD+KC++CQG GHY+ +C N
Sbjct: 306  YQKE-------SKPQPKEEAKSSSIYNKDKGKVEATSSRARDVKCFKCQGRGHYANECTN 365

Query: 365  ARIMTIK-EGEIVTDDEAHDDINEETDESEEFSEEDPTHISLVTRRALNTHIKEDGLDQR 424
             R+M +   GE  + D+   +  E+    EE+         LV RR L+   K + ++QR
Sbjct: 366  KRVMILHANGEYESADD-ETEAEEDHSSEEEYVANPVAGRLLVARRTLSLQSKTEEMEQR 425

Query: 425  ENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRV 484
            ENLF TRCLVQ   CS+++D GSC NV S  +VK+L L+ Q HP+PY+LQWLN+ GE+RV
Sbjct: 426  ENLFYTRCLVQGKVCSLIVDGGSCVNVASETMVKKLGLRVQKHPKPYRLQWLNEEGEMRV 485

Query: 485  TQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTT 544
              Q +V   IGKY D++LCDV+ M  G +LLGRPWQ DRRV++DGYAN+++F   GRKT 
Sbjct: 486  ATQVMVPLAIGKYEDEILCDVLPMEAGHILLGRPWQSDRRVIHDGYANKHTFEFKGRKTV 545

Query: 545  LIPLSPKDVFIDHCKLEKKRQEADAKAEIEKESSEKKSLSEKQESNTQPREKKERKAKSV 604
            L+P++PK+V +D  +L+KK+ E D  AE                             K +
Sbjct: 546  LVPMTPKEVQVDQLQLQKKK-EIDLPAE---------------------------STKQL 605

Query: 605  SLYVRSSEARNVLLSNQ--TILVLMCKGSCYFTNMLNPSLPSDFVVLLQEFEHLFSEEMP 664
            + Y +S + +  L SN    + +   K S   T  + P  PS+ V LLQE++ +F E+ P
Sbjct: 606  NFYAKSGDVKRSLCSNLPILLFIY--KESLLTTTNIAPEYPSELVNLLQEYQDVFPEDSP 665

Query: 665  SSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKGY--------AIN 724
            + LPP+RGIEH+IDF+PG+ +PNRPAYRTNP E +E+QRQV EL+ KG+        A+ 
Sbjct: 666  NGLPPVRGIEHQIDFVPGSTLPNRPAYRTNPVETKELQRQVEELMEKGHIRESMSPCAVP 725

Query: 725  KITI----------KYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAF 784
             + +           +   I  L  +LD L   SLF  +                 K  F
Sbjct: 726  VLLVPKKDGSWRIKSFNDHIEHLRAVLDVLRKESLFANLK----------------KCTF 785

Query: 785  KTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLVSSNGVEVDEEKVKAIKDWPTPKNV 844
             T + ++                          ++V ++GV+VD EKV+AI++WP PK V
Sbjct: 786  GTDHLVFL------------------------GFIVGADGVKVDPEKVRAIREWPIPKTV 845

Query: 845  SEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLL 904
            SEVRSFHGLA FYRRF+K+FSTIASPL E++KK V F W + QELAF  LKEKL++APLL
Sbjct: 846  SEVRSFHGLAGFYRRFVKDFSTIASPLTEVIKKEVGFKWGEAQELAFQCLKEKLTNAPLL 905

Query: 905  ALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQ 964
             LP+F  TFEIECDASG+GIGAVLMQ +RP+ +FSEKL GA+L Y TYDKELYALVRALQ
Sbjct: 906  ILPDFNKTFEIECDASGIGIGAVLMQEKRPIAYFSEKLGGATLNYATYDKELYALVRALQ 965

Query: 965  TWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADA 1024
            TWQHYLWPKEF+IHTDHESLK+L+ Q+KL++RHA                          
Sbjct: 966  TWQHYLWPKEFVIHTDHESLKYLKGQHKLSKRHA-------------------------- 1025

Query: 1025 LSRRYVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKL 1084
              RRYVLLNTL+A+LLGFE IK +Y++D  F     SCEK     +Y   DGFLF   +L
Sbjct: 1026 --RRYVLLNTLDAKLLGFEQIKGMYENDPDFKEAYNSCEK-FAEGHYFRHDGFLFYDNRL 1085

Query: 1085 CIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCGRCIACKQAK 1144
            C+P+CS+R+L VRE+HGG LM H G++KT   L +HFFWP+M+ DV K+C RC  CKQAK
Sbjct: 1086 CVPNCSLRDLFVRESHGGSLMGHFGIAKTLKTLQDHFFWPRMKRDVEKLCERCATCKQAK 1141

Query: 1145 SRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTD 1204
            S++Q HGLY+PLP+P  PW DISMDF++GLPRTR G DSIFVVVDRFSKMAHFI CHKTD
Sbjct: 1146 SKVQSHGLYTPLPIPYHPWNDISMDFIVGLPRTRTGKDSIFVVVDRFSKMAHFIACHKTD 1141

Query: 1205 DAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYS 1228
            DA HIA+LFF+E+VR+HG+PK+IVSDRD KFLS+FW+ LW KLGTKL++S
Sbjct: 1206 DALHIANLFFKEIVRIHGMPKTIVSDRDTKFLSYFWKTLWSKLGTKLLFS 1141

BLAST of CmoCh11G012300 vs. NCBI nr
Match: gi|727521082|ref|XP_010436772.1| (PREDICTED: uncharacterized protein LOC104720585 [Camelina sativa])

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 595/1324 (44.94%), Postives = 814/1324 (61.48%), Query Frame = 1

Query: 16   REAQQRTMERLIRGIEELTDRIGRLEIQNQARQRIPQPTPSTDTYEGDNSDHHEDNPHAV 75
            ++A  + M  L   +  L D+IGRLE   QAR  +       +  + ++     D+    
Sbjct: 9    QDAMLQMMRTLTEQLRGLGDKIGRLE-NPQARVDVGPDPEQRNVRDVEDESIDMDDDDDP 68

Query: 76   GPGLMRGRDHGRKYHNLQQRVPYDDRIDRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESV 135
             P  +R +   R+   ++ R    +  ++N   +KL  P F GK++PE Y+ WE+ +E +
Sbjct: 69   PPDPLRHQHQRREDTLMRNRAREVEPREQN-RDVKLIPPTFAGKSNPEVYMDWERRMEYI 128

Query: 136  FNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQY 195
            F C+ + + +KV L  AQ    A  WWD+ +  RRR   A I SW + K  +R R+VP +
Sbjct: 129  FQCYGYGEARKVALASAQLTDNALSWWDRTVPDRRRQQFATISSWGDMKYLLRLRYVPDH 188

Query: 196  FQRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLELDEDMEALMARFLNGLNTEIADKTDL 255
            +QRD+ ++ + L QG ++V++Y++E + LM+ LEL+E  E+L+A+F++GL   IA K ++
Sbjct: 189  YQRDLQKRFRKLSQGTRTVDEYFEEFEKLMNSLELEESSESLIAQFIDGLQERIARKVEI 248

Query: 256  QPYSNIEELLHIAIKIERQIQRRSQRYSSKTFPNSTSTWK-KDSKNIDYKHRNQEINEKP 315
              Y+++ ELLH A+++E+QIQR+    S +    + + W   +++++D   + + +    
Sbjct: 249  SNYNSLHELLHKAVQVEQQIQRKM---SLRNRTRNNTPWNASNNRSMD---KGKIVENDS 308

Query: 316  QAKFEKGESSRTGKEKVEK----SNVRNRDLKCWRCQGVGHYSRDCPNARIMTIKEGEIV 375
            + K +  E+ +T K K  K    S  R RD+ C++CQG GH +R+CPN R+M +      
Sbjct: 309  RFKNKSNEAPKTSKPKPGKFPNTSQSRTRDITCFKCQGRGHMARECPNQRVMIVTPS--- 368

Query: 376  TDDEAHDDINEETDESEEFSEEDPTHISLVTRRALNTHIKEDGLDQRENLFQTRCLVQSV 435
             D E+ D  +E   + E   E   T   LV +R L+  +      QREN+F TRC +++ 
Sbjct: 369  GDYESQDKQDEYQTDPENDVEYPDTRELLVIQRILSVLVNPKEKVQRENIFHTRCKIKNK 428

Query: 436  PCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKY 495
             C+++ID GSCTNV S  +V RL L+   HPRPYKL+ LN+  E+ + +Q +VSF++GKY
Sbjct: 429  VCNLIIDGGSCTNVSSKYMVDRLGLQKTKHPRPYKLRLLNNDTELNIAEQVIVSFSVGKY 488

Query: 496  VDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDH 555
             D V+CDVV M  G LLLGRPWQFDR   + G  N Y+FTHN  K  L PLSP +V    
Sbjct: 489  QDQVICDVVPMRAGHLLLGRPWQFDRATTHVGRTNHYTFTHNDCKFNLAPLSPSEVH--- 548

Query: 556  CKLEKKRQEADAKAEIEKESSEKKSLSEKQESNTQPREKKERKAKSVSLYVRSSEARNVL 615
             +L+K   +     E+E  +S                          +LY+RS E    +
Sbjct: 549  -ELQKHMNK-----EVEVRTS--------------------------NLYLRSIEVCKTM 608

Query: 616  LSNQTILVLMCKGSCYFTNMLNPSLPSDFVVLLQEFEHLFSEEMPSSLPPLRGIEHKIDF 675
             +  T+L++M K  C  T      LP++   +L +++ +F EE+P  LPP+ GIEH+ID 
Sbjct: 609  RAKGTVLLMMFK-ECLSTGTSELELPAEVQAVLGQYKDVFPEEIPPGLPPICGIEHQIDL 668

Query: 676  IPGAPIPNRPAYRTNPKEAEEIQRQVSELLAKGY-------------------------- 735
            +PG+ +PN+PAYR NP+E++E+++QV EL+ KGY                          
Sbjct: 669  VPGSALPNKPAYRMNPEESKELEKQVRELMDKGYIRESLSPCAVPVLLVPKKDGTWRMCV 728

Query: 736  ---AINKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFKTKY 795
               AIN ITIKYR PIPRLDDMLDEL G  +F+KIDL+SGY+Q+RM  GDEWKTA KTK 
Sbjct: 729  DCRAINNITIKYRDPIPRLDDMLDELSGAIVFSKIDLRSGYNQVRMREGDEWKTALKTKQ 788

Query: 796  GLYEWLVMPFGLTNAPSTFMRLMNHVLREYLVSSNGVEVDEEKVKAIKDWPTPKNVSEVR 855
            GLYEWLVMPFGLTNAPSTFMRLMN VLR ++VS  G++VDEEK+KAI++WPTP ++    
Sbjct: 789  GLYEWLVMPFGLTNAPSTFMRLMNQVLRSFIVSKQGLQVDEEKIKAIREWPTPTSIG--- 848

Query: 856  SFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPN 915
              HG A       K+F+ +   L +                           AP+LAL +
Sbjct: 849  --HGEAQ-----EKSFNILKERLTQ---------------------------APVLALSD 908

Query: 916  FESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQH 975
            FE  FE+ECDASG+GIGAVL Q +RP+ FFSEKL+G +L YPTYDKELYAL RAL+TWQH
Sbjct: 909  FEVMFEVECDASGLGIGAVLHQMKRPVAFFSEKLSGPTLNYPTYDKELYALGRALETWQH 968

Query: 976  YLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRR 1035
            YL  KEFIIHTDHE+LKHL+ Q  L RRHAKWLEFIETFPYVIKYK+GKEN+VADALSRR
Sbjct: 969  YLLSKEFIIHTDHETLKHLKGQTSLKRRHAKWLEFIETFPYVIKYKKGKENVVADALSRR 1028

Query: 1036 YVLLNTLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPS 1095
            + L+ T+ A+++GFEHIK+LY+ D       +   KG   + Y L DGFLFR  +LCIP 
Sbjct: 1029 HALIATMEAKVMGFEHIKELYKDDPELGECYKEYGKGAYQEFY-LQDGFLFRDKRLCIPQ 1088

Query: 1096 CSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCGRCIACKQAKSRLQ 1155
             S+REL++ EAHGGGLM H GV KT  ++ EHFFWP ++  V + C RCI C +AKSRL 
Sbjct: 1089 GSMRELILTEAHGGGLMGHFGVDKTLAVVMEHFFWPHLKKHVERFCARCIVCHKAKSRLH 1148

Query: 1156 PHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKH 1215
            PHGLY PLP+PN PW+DISMDFVLGLP+  K  DSIFVVVD FSKMAHFIPC KT+DA  
Sbjct: 1149 PHGLYLPLPIPNAPWVDISMDFVLGLPKI-KHKDSIFVVVDWFSKMAHFIPCDKTNDATQ 1208

Query: 1216 IADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSXGDLLLGRPWQFDR 1275
             A+LFF+EVVRLHGIP++IVSDRD KFLSHFW+ LW KLGTKL++S              
Sbjct: 1209 TANLFFKEVVRLHGIPRTIVSDRDTKFLSHFWKTLWRKLGTKLLFST-----------TC 1235

Query: 1276 RVMYDGYANRYSFTHNGRKTTLIPLSPKDIFIDHCKLEKKRQEA------DAKAEIEKES 1300
                DG     + T +      + L+P       C+   +R E        AKA +EK++
Sbjct: 1269 HPQTDGQTEVVNRTLSTLLRATLDLAPLPQIEQVCQDGLRRGEIIKKLHDKAKANLEKKN 1235

BLAST of CmoCh11G012300 vs. NCBI nr
Match: gi|727602309|ref|XP_010474157.1| (PREDICTED: uncharacterized protein LOC104753631 [Camelina sativa])

HSP 1 Score: 1063.1 bits (2748), Expect = 6.2e-307
Identity = 562/1164 (48.28%), Postives = 751/1164 (64.52%), Query Frame = 1

Query: 110  KLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSR 169
            KL  P F GK DPE YL  E  ++ +F C+N+ + KK+    AQF  +A  WWD+  + R
Sbjct: 97   KLTAPTFAGKVDPEAYLDLEGRMDHIFACYNYPEPKKIAYAAAQFTDHALTWWDRSEADR 156

Query: 170  RRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLE 229
            RRN E  +  W   K  MR+R+VP  + R++ ++ + L QG KSVEDYY+E + L +RLE
Sbjct: 157  RRNGERALPHWEAMKNEMRRRYVPPLYHRELQRRFRKLSQGAKSVEDYYEEFEHLRNRLE 216

Query: 230  LDEDMEALMARFLNGLNTEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRYSSKTFPN 289
            +++  E LMA+FL+GL   IA K +   Y++ +ELLH+A+++E+QI+R++     ++   
Sbjct: 217  VEDSEEGLMAQFLDGLQDRIARKVERLTYNSFDELLHLAMQVEQQIKRKANTIH-RSRAQ 276

Query: 290  STSTWKKDSKNIDYKHRNQEINE--------KPQAKFEKGESSRTGKEKVEKSNVRNRDL 349
             T +W  +S      HR QE ++        KP+   ++ + SRT     + +  R+RD+
Sbjct: 277  GTPSWSPNSSPGPGGHRGQEKSKAVTIDSRFKPR---DQNKDSRTDPRS-QLTEGRSRDI 336

Query: 350  KCWRCQGVGHYSRDCPNARIMTIKEGEIVT--DDEAHDDINEETDESEEFSEEDPTHISL 409
             C +CQG GHY+RDCPN R +TI     +   DD   D+ N+  +  E  +E D   + L
Sbjct: 337  ICVKCQGRGHYTRDCPNPRTLTITASRELESKDDNDPDEPNDAKEVKEVVAEPDEREL-L 396

Query: 410  VTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQP 469
            + RR LNT    D   QR+N+F TRC V    C ++ID GSCTNV SS +VK+L+L T  
Sbjct: 397  MIRRVLNTSQCPDDTHQRDNIFHTRCTVSGKVCGLIIDGGSCTNVASSYMVKKLSLGTTN 456

Query: 470  HPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVM 529
            HP+PYKL+WLND   V VT+Q  V F++G   D VLCDVV M    LL  RPWQFD+R  
Sbjct: 457  HPKPYKLKWLNDKAVVPVTEQVTVPFSVGPCKDQVLCDVVPMQASHLLFWRPWQFDKRTS 516

Query: 530  YDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKKRQEADAKAEIEKESSEKKSLSEK 589
            + G+ N+YSF H+ ++  L PLSP  V    C+L+ K         + KE S K +    
Sbjct: 517  HCGHTNQYSFVHDNKRICLKPLSPTQV----CELQSK---------MSKEPSTKMNFL-- 576

Query: 590  QESNTQPREKKERKAKSVSLYVRSSEARNVLLSNQTILVLMCKGSCYFTNMLNPSLPSDF 649
                          A +V   +  S  + +L++ + ++ +  +       M+ P L    
Sbjct: 577  ------------INASTVRRSLSDSTCQVLLMAFKDVVRIGMEQDA-VPAMIRPLLRRYQ 636

Query: 650  VVLLQEFEHLFSEEMPSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQRQVSEL 709
             V   E  H         LPPLRGI+H+ID +PGA +PNRPAYR NP+EA+E++RQVSEL
Sbjct: 637  DVFPDELLHG--------LPPLRGIKHQIDLVPGAQLPNRPAYRVNPEEAKELERQVSEL 696

Query: 710  LAKGY-----------------------------AINKITIKYRHPIPRLDDMLDELHGC 769
            + +GY                             A+N ITIKYRHPIPRLDDMLDEL G 
Sbjct: 697  MEQGYVRESLSPCAVPVLLVPKKDGTWRMCVDCRAVNNITIKYRHPIPRLDDMLDELSGS 756

Query: 770  SLFTKIDLKSGYHQIRMHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLRE 829
            ++F+KIDLKSGYHQ+RM  GD+     K      E L +          +      V   
Sbjct: 757  TIFSKIDLKSGYHQVRMKEGDD-----KCLEEHLEHLSLVLDTLRENKLYANFKKCVFGA 816

Query: 830  -------YLVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASP 889
                   ++VS+ G++VD +K+KAI++WPTP N+S+VRSFHGLASFYRRF+++FS++A+P
Sbjct: 817  NELVFLGFVVSAQGLKVDNDKIKAIEEWPTPTNISQVRSFHGLASFYRRFVRDFSSVAAP 876

Query: 890  LNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQ 949
            L   +KK+V F W   QE AF  LK +L+ APLLALP+F  TFE+ECDASGVGIGAVL Q
Sbjct: 877  LTATIKKSVEFKWGPAQEAAFRELKHRLTHAPLLALPDFSKTFEVECDASGVGIGAVLTQ 936

Query: 950  NQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQ 1009
              +P+ +FSEKL+G +L YPTYDKELYALVRA++TWQHYL  KE +IHTDHE+LKHLR Q
Sbjct: 937  GGKPIAYFSEKLSGPTLNYPTYDKELYALVRAMETWQHYLLAKECVIHTDHETLKHLRGQ 996

Query: 1010 NKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLGFEHIKDLYQ 1069
              L RRHAKWLEFIETFPYVIKYK+GKEN+VADALSRR+ L+ T++AR+LGFEHIKD Y 
Sbjct: 997  TNLKRRHAKWLEFIETFPYVIKYKKGKENVVADALSRRHTLITTMDARILGFEHIKDAYG 1056

Query: 1070 HDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGV 1129
             D  FA   +   KG     + + DGFLF++ +LC+P+ S+RELL+REAHGGGL  H+GV
Sbjct: 1057 LDPDFAECYQEHGKGSYT-KFFVHDGFLFKERRLCVPAGSMRELLMREAHGGGLTGHYGV 1116

Query: 1130 SKTYDMLSEHFFWPKMRHDVHKVCGRCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDF 1189
            +KT  +L EHF+WPKM+  V K CG CI C+ AKS  +P+GLY+PLP+ + PW+D+SMDF
Sbjct: 1117 AKTMAILKEHFYWPKMKRMVEKFCGSCIMCRTAKSTTRPYGLYTPLPIASSPWVDLSMDF 1176

Query: 1190 VLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSD 1228
            VLGLP   K  D+IFVVVDRFSKMAHFIPC+KT+DA HIA+LFFREVVRLHG+P++IVSD
Sbjct: 1177 VLGLPPCDK-KDAIFVVVDRFSKMAHFIPCNKTNDAMHIANLFFREVVRLHGLPRTIVSD 1211

BLAST of CmoCh11G012300 vs. NCBI nr
Match: gi|848853262|ref|XP_012842863.1| (PREDICTED: uncharacterized protein LOC105963045 [Erythranthe guttata])

HSP 1 Score: 1010.4 bits (2611), Expect = 4.8e-291
Identity = 482/767 (62.84%), Postives = 587/767 (76.53%), Query Frame = 1

Query: 1373 QEFEDLFFEEMPSSLPPLRGIEHKIDFIPGAPIPNRPAYRTNPKEAEEIQXYDVK----- 1432
            +EFED+F EE+P  LPP+RGIEH+IDF+PGA IPNRPAYR++P+E +E+Q    +     
Sbjct: 433  REFEDVFPEEVPPGLPPIRGIEHQIDFVPGATIPNRPAYRSSPEETKELQRQVDELLEKG 492

Query: 1433 --------CLSFFLLIT--------IFSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGL 1492
                    C    LL+         + S+ G+EVDEEKV AI DWPTP +V++VRSFHGL
Sbjct: 493  HVTESMSPCAVPVLLVPKKDGTWRYVVSAKGIEVDEEKVMAIPDWPTPTSVTQVRSFHGL 552

Query: 1493 ASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTF 1552
            A FYRRF+++FS+IA+PL  ++KKNV F W ++QE AF  +K+KL++APLL LPNF   F
Sbjct: 553  AGFYRRFVRDFSSIAAPLTAVIKKNVPFKWGEEQERAFQLIKDKLTNAPLLVLPNFTKMF 612

Query: 1553 EIECDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPK 1612
            EIECD SG+GIG VLMQ  RP+ +FSEKL+GA+L YPTYDKELYALVR L+TWQHYLW K
Sbjct: 613  EIECDISGIGIGGVLMQEGRPIAYFSEKLSGAALNYPTYDKELYALVRTLETWQHYLWAK 672

Query: 1613 EFIIHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLN 1672
            EF+IH+DHESLKHL+ Q KL++RHAKW+EFIETFPYVIKYKQGKENIVADALSRRY    
Sbjct: 673  EFVIHSDHESLKHLKGQYKLSKRHAKWVEFIETFPYVIKYKQGKENIVADALSRRY---- 732

Query: 1673 TLNARLLGFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRE 1732
                           Y HD F           L  +N L +            P  S+RE
Sbjct: 733  --------------FYLHDGF-----------LFRENKLCV------------PHSSLRE 792

Query: 1733 LLVREAHGGGLMAHHGVSKTYDMLSKHFFWPKMRHDVHKVCGRCIACKQAKSRLQPHGLY 1792
            LLVRE+H GGLM H GV+KT  +L +HFFWP+M+HDV K+C RCI+CKQAKSRLQPHGLY
Sbjct: 793  LLVRESHSGGLMGHFGVAKTLGVLHEHFFWPRMKHDVEKICARCISCKQAKSRLQPHGLY 852

Query: 1793 SPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLF 1852
            +PLP+PN PW+DISMDFVLGLPRT++G DS+FVVVDRFSKMAHFI CHKTDDA H+A+LF
Sbjct: 853  TPLPIPNAPWVDISMDFVLGLPRTKRGRDSVFVVVDRFSKMAHFIACHKTDDASHVANLF 912

Query: 1853 FREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMT 1912
            F E+VRLHG+P++IVSDRD +FLS+FW+ LWGKLGTKL++STTCHPQTDGQTEVVNRT++
Sbjct: 913  FCEIVRLHGMPRTIVSDRDARFLSYFWKTLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLS 972

Query: 1913 AMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEF 1972
             +LRAII KNLKTWEDCLP +EFAYNR VHS TK +PFEIVYGFNPLTP+DL P+P  E 
Sbjct: 973  TLLRAIIQKNLKTWEDCLPHVEFAYNRCVHSATKFSPFEIVYGFNPLTPLDLTPLPLDER 1032

Query: 1973 VNFDANAKVEFSHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPT 2032
            VN D   K +F  +LH++ ++ IE++  +   + NKGRK V+F+PGDWVW+H RK+RFP 
Sbjct: 1033 VNLDGEKKADFVKQLHEKARQHIERRTEQYVKQANKGRKKVVFEPGDWVWLHMRKDRFPQ 1092

Query: 2033 QRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPFDVGDGLDSRTNPS 2092
            QR+SKLLPRGDGPFQV+ERINDNAYK++LPG+YGVS +FNV DLSPFDVGD  D RTN S
Sbjct: 1093 QRRSKLLPRGDGPFQVVERINDNAYKLELPGEYGVSNSFNVSDLSPFDVGDA-DLRTNLS 1152

Query: 2093 QEGENDMN-------HDQGISIPQGPITRTRAKKLQQTLYSYIQAMV 2112
            QEGEND N       H + +S+P GPITR RAK+ ++ LY  IQ  V
Sbjct: 1153 QEGENDANGTIRDEVHQEPLSLPSGPITRLRAKRFKEALYGLIQEEV 1157

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YG31B_YEAST4.9e-10235.70Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
YI31B_YEAST2.4e-10136.09Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
TF23_SCHPO7.1e-9332.67Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF212_SCHPO7.1e-9332.67Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
TF21_SCHPO7.1e-9332.67Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
Match NameE-valueIdentityDescription
A0A151UF56_CAJCA1.3e-27970.08Transposon Ty3-I Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_049062 PE=4 SV=1[more]
Q8L7J3_MAIZE1.1e-27064.77Gag-pol polyprotein OS=Zea mays PE=4 SV=1[more]
Q9LQH2_ARATH1.9e-27067.91F15O4.13 OS=Arabidopsis thaliana PE=4 SV=1[more]
A4K7M3_ORYSJ4.7e-26963.54Putative polyprotein OS=Oryza sativa subsp. japonica PE=4 SV=1[more]
B5G4Y0_TRIMO6.3e-26663.27Putative gag-pol polyprotein OS=Triticum monococcum subsp. aegilopoides GN=gag-p... [more]
Match NameE-valueIdentityDescription
ATMG00860.16.1e-1844.79ATMG00860.1 DNA/RNA polymerases superfamily protein[more]
AT2G15180.19.1e-0634.29 Zinc knuckle (CCHC-type) family protein[more]
AT1G40129.19.1e-0624.00 unknown protein[more]
Match NameE-valueIdentityDescription
gi|823145097|ref|XP_012472412.1|0.0e+0052.92PREDICTED: uncharacterized protein LOC105789586 [Gossypium raimondii][more]
gi|923695255|ref|XP_013657890.1|0.0e+0046.96PREDICTED: uncharacterized protein LOC106362556 [Brassica napus][more]
gi|727521082|ref|XP_010436772.1|0.0e+0044.94PREDICTED: uncharacterized protein LOC104720585 [Camelina sativa][more]
gi|727602309|ref|XP_010474157.1|6.2e-30748.28PREDICTED: uncharacterized protein LOC104753631 [Camelina sativa][more]
gi|848853262|ref|XP_012842863.1|4.8e-29162.84PREDICTED: uncharacterized protein LOC105963045 [Erythranthe guttata][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR001584Integrase_cat-core
IPR001878Znf_CCHC
IPR005162Retrotrans_gag_dom
IPR012337RNaseH-like_sf
IPR021109Peptidase_aspartic_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006310 DNA recombination
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G012300.1CmoCh11G012300.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 694..792
score: 4.4
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 1784..1893
score: 5.5
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 1776..1936
score: 18.871coord: 1131..1227
score: 9
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 338..358
score: 2.
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 342..358
score: 2.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 342..358
score: 9.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 342..358
score: 9
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 332..359
score: 2.
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 153..247
score: 8.4
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 1131..1227
score: 1.4E-13coord: 1785..1937
score: 6.9
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 1128..1228
score: 2.28E-20coord: 1773..1934
score: 9.23
IPR021109Aspartic peptidase domainunknownSSF50630Acid proteasescoord: 419..512
score: 1.7
NoneNo IPR availableunknownCoilCoilcoord: 1284..1304
score: -coord: 16..43
score: -coord: 559..579
scor
NoneNo IPR availableGENE3DG3DSA:3.10.10.10coord: 706..784
score: 7.1
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 1657..2124
score: 7.5E-292coord: 706..1007
score: 7.5E
NoneNo IPR availablePANTHERPTHR24559:SF174SUBFAMILY NOT NAMEDcoord: 706..1007
score: 7.5E-292coord: 1657..2124
score: 7.5E
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 1372..1632
score: 1.48E-64coord: 642..987
score: 3.78E

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G012300Wax gourdcmowgoB0164
CmoCh11G012300Cucurbita maxima (Rimu)cmacmoB679
CmoCh11G012300Cucurbita pepo (Zucchini)cmocpeB127