CmoCh11G012290 (gene) Cucurbita moschata (Rifu)

BLAST of CmoCh11G012290 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 578.9 bits (1491), Expect = 1.6e-163
Identity = 338/897 (37.68%), Postives = 492/897 (54.85%), Query Frame = 1

Query: 639  VVLLQEFEDLFSEEMPSSLPPLRGI--EHKIDFIPGSPIPNRPAYRTNPKEAEEIQRQVS 698
            V L Q++ ++   ++P     +  I  +H I+  PG+ +P    Y    K  +EI + V 
Sbjct: 558  VWLQQKYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 617

Query: 699  ELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELH 758
            +LL   ++  S SPCS PV+LVPKKDG++R+CVD R +NK TI    P+PR+D++L  + 
Sbjct: 618  KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 677

Query: 759  GCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 818
               +FT +DL SGYHQI M   D +KTAF T  G YE+ VMPFGL NAPSTF R M    
Sbjct: 678  NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF 737

Query: 819  REYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF 878
            R+   +FV VY DDIL++S+S ++H  H+  VL  L+NE L V  KKC F  E+  FLG+
Sbjct: 738  RDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 797

Query: 879  VVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 938
             +    +   + K  AI+D+PTPK V + + F G+ ++YRRFI N S IA P+   +   
Sbjct: 798  SIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDK 857

Query: 939  VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVL--MQNQRPLM 998
                W + Q+ A + LK+ L ++P+L   N ++ + +  DAS  GIGAVL  + N+  L+
Sbjct: 858  SQ--WTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLV 917

Query: 999  ----FFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNK 1058
                +FS+ L  A   YP  + EL  +++AL  +++ L  K F + TDH SL  L+ +N+
Sbjct: 918  GVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNE 977

Query: 1059 LNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLSFE--------- 1118
              RR  +WL+ + T+ + ++Y  G +N+VADA+SR    +    +R +  E         
Sbjct: 978  PARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSD 1037

Query: 1119 --------HIKDLYQHDMF------FAPFVESCEKG-LIVDNYLLLDGFLFRKGKLCIPS 1178
                    H+K+L QH++       F  + +  E       NY L D  ++ + +L +P 
Sbjct: 1038 PLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVP- 1097

Query: 1179 CSIRELLVREAHGGGLMA-HHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKS-R 1238
               +  ++R  H   L   H GV+ T   +S  ++WPK++H + +    C+ C+  KS R
Sbjct: 1098 IKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHR 1157

Query: 1239 LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDA 1298
             + HGL  PLP+  G W+DISMDFV GLP T    + I VVVDRFSK AHFI   KT DA
Sbjct: 1158 PRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDA 1217

Query: 1299 KHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTE 1358
              + DL FR +   HG P++I SDRDV+  +  ++ L  +LG K   S+  HPQTDGQ+E
Sbjct: 1218 TQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSE 1277

Query: 1359 VVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLL 1418
               +T+  +LRA    N++ W   LP IEF YN     T   +PFEI  G+ P TP    
Sbjct: 1278 RTIQTLNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP---- 1337

Query: 1419 PIPSKEFVNFDANAKVEFVHKLHK---QVKEQIEKQNSKVATRINKGRKIVIFKPGDWVW 1478
             I S + VN  +   VE    L     Q KEQ+E    ++ T  N+ RK ++   GD V 
Sbjct: 1338 AIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVL 1397

Query: 1479 VHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPF 1499
            VH R   F      K+     GPF+V+++INDNAY++DL          NV  L  F
Sbjct: 1398 VH-RDAYFKKGAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLKKF 1444

BLAST of CmoCh11G012290 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 576.6 bits (1485), Expect = 8.1e-163
Identity = 334/879 (38.00%), Postives = 487/879 (55.40%), Query Frame = 1

Query: 639  VVLLQEFEDLFSEEMPSSLPPLRGI--EHKIDFIPGSPIPNRPAYRTNPKEAEEIQRQVS 698
            V L Q++ ++   ++P     +  I  +H I+  PG+ +P    Y    K  +EI + V 
Sbjct: 584  VWLQQKYREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 643

Query: 699  ELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELH 758
            +LL   ++  S SPCS PV+LVPKKDG++R+CVD R +NK TI    P+PR+D++L  + 
Sbjct: 644  KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 703

Query: 759  GCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 818
               +FT +DL SGYHQI M   D +KTAF T  G YE+ VMPFGL NAPSTF R M    
Sbjct: 704  NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF 763

Query: 819  REYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF 878
            R+   +FV VY DDIL++S+S ++H  H+  VL  L+NE L V  KKC F  E+  FLG+
Sbjct: 764  RDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 823

Query: 879  VVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 938
             +    +   + K  AI+D+PTPK V + + F G+ ++YRRFI N S IA P+   +   
Sbjct: 824  SIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDK 883

Query: 939  VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVL--MQNQRPLM 998
                W + Q+ A   LK  L ++P+L   N ++ + +  DAS  GIGAVL  + N+  L+
Sbjct: 884  SQ--WTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLV 943

Query: 999  ----FFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNK 1058
                +FS+ L  A   YP  + EL  +++AL  +++ L  K F + TDH SL  L+ +N+
Sbjct: 944  GVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNE 1003

Query: 1059 LNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLSFE--------- 1118
              RR  +WL+ + T+ + ++Y  G +N+VADA+SR    +    +R +  E         
Sbjct: 1004 PARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYTITPETSRPIDTESWKSYYKSD 1063

Query: 1119 --------HIKDLYQHDMF------FAPFVESCEKG-LIVDNYLLLDGFLFRKGKLCIPS 1178
                    H+K+L QH++       F  + +  E       NY L D  ++ + +L +P 
Sbjct: 1064 PLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVP- 1123

Query: 1179 CSIRELLVREAHGGGLMA-HHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKS-R 1238
               +  ++R  H   L   H GV+ T   +S  ++WPK++H + +    C+ C+  KS R
Sbjct: 1124 IKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHR 1183

Query: 1239 LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDA 1298
             + HGL  PLP+  G W+DISMDFV GLP T    + I VVVDRFSK AHFI   KT DA
Sbjct: 1184 PRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDA 1243

Query: 1299 KHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTE 1358
              + DL FR +   HG P++I SDRDV+  +  ++ L  +LG K   S+  HPQTDGQ+E
Sbjct: 1244 TQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSE 1303

Query: 1359 VVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLL 1418
               +T+  +LRA +  N++ W   LP IEF YN     T   +PFEI  G+ P TP    
Sbjct: 1304 RTIQTLNRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP---- 1363

Query: 1419 PIPSKEFVNFDANAKVEFVHKLHK---QVKEQIEKQNSKVATRINKGRKIVIFKPGDWVW 1478
             I S + VN  +   VE    L     Q KEQ+E    ++ T  N+ RK ++   GD V 
Sbjct: 1364 AIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVL 1423

Query: 1479 VHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDL 1481
            VH R   F      K+     GPF+V+++INDNAY++DL
Sbjct: 1424 VH-RDAYFKKGAYMKVQQIYVGPFRVVKKINDNAYELDL 1452

BLAST of CmoCh11G012290 vs. Swiss-Prot
Match: TF29_SCHPO (Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-9 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 6.9e-146
Identity = 308/903 (34.11%), Postives = 492/903 (54.49%), Query Frame = 1

Query: 632  PSLPSDFVVLLQEFEDLFSEEMPSSLP-PLRGIEHKIDFIPGS---PIPNRPAYRTNPKE 691
            P LP     + +EF+D+ +E     LP P++G+E +++    +   PI N P     P +
Sbjct: 372  PELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPL---PPGK 431

Query: 692  AEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPR 751
             + +  ++++ L  G +RES +  + PV+ VPKK+G+ RM VD + +NK      +P+P 
Sbjct: 432  MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 491

Query: 752  LDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEWLVMPFGLTNAPST 811
            ++ +L ++ G ++FTK+DLKS YH IR+  GDE K AF    G++E+LVMP+G++ AP+ 
Sbjct: 492  IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 551

Query: 812  FMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFC 871
            F   +N +L E     VV Y DDIL++SKS  +H+ HV++VL  L+N  L +N  KC F 
Sbjct: 552  FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 611

Query: 872  MEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIAS 931
              +V F+G+ +S  G    +E +  +  W  PKN  E+R F G  ++ R+FI   S +  
Sbjct: 612  QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 671

Query: 932  PLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLM 991
            PLN L+KK+V + W   Q  A   +K+ L S P+L   +F     +E DAS V +GAVL 
Sbjct: 672  PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 731

Query: 992  QNQ-----RPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHE 1051
            Q        P+ ++S K++ A L Y   DKE+ A++++L+ W+HYL    + F I TDH 
Sbjct: 732  QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 791

Query: 1052 SLKHLRVQNKL---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR------------ 1111
            +L   R+ N+    N+R A+W  F++ F + I Y+ G  N +ADALSR            
Sbjct: 792  NLIG-RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDS 851

Query: 1112 RYVLLNTLNARLLSFE---HIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGK 1171
                +N +N   ++ +    +   Y +D      + + +K  + +N  L DG L   K +
Sbjct: 852  EDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK-RVEENIQLKDGLLINSKDQ 911

Query: 1172 LCIPS-CSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQ 1231
            + +P+   +   ++++ H  G + H G+    +++   F W  +R  + +    C  C+ 
Sbjct: 912  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 971

Query: 1232 AKSR-LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCH 1291
             KSR  +P+G   P+P    PW  +SMDF+  LP +  GY+++FVVVDRFSKMA  +PC 
Sbjct: 972  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1031

Query: 1292 KTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQT 1351
            K+  A+  A +F + V+   G PK I++D D  F S  W+    K    + +S    PQT
Sbjct: 1032 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1091

Query: 1352 DGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNP-L 1411
            DGQTE  N+T+  +LR +   +  TW D +  ++ +YN  +HS T+ TPFEIV+ ++P L
Sbjct: 1092 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1151

Query: 1412 TPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPG 1471
            +P++L     K   N     +V       + VKE +   N K+    + K ++I  F+PG
Sbjct: 1152 SPLELPSFSDKTDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1211

Query: 1472 DWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPG--KYGVSATFNVVDL 1499
            D V V   K  F   + +KL P   GPF VL++   N Y++DLP   K+  S+TF+V  L
Sbjct: 1212 DLVMVKRTKTGF-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1257

BLAST of CmoCh11G012290 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 6.9e-146
Identity = 308/903 (34.11%), Postives = 492/903 (54.49%), Query Frame = 1

Query: 632  PSLPSDFVVLLQEFEDLFSEEMPSSLP-PLRGIEHKIDFIPGS---PIPNRPAYRTNPKE 691
            P LP     + +EF+D+ +E     LP P++G+E +++    +   PI N P     P +
Sbjct: 372  PELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPL---PPGK 431

Query: 692  AEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPR 751
             + +  ++++ L  G +RES +  + PV+ VPKK+G+ RM VD + +NK      +P+P 
Sbjct: 432  MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 491

Query: 752  LDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEWLVMPFGLTNAPST 811
            ++ +L ++ G ++FTK+DLKS YH IR+  GDE K AF    G++E+LVMP+G++ AP+ 
Sbjct: 492  IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 551

Query: 812  FMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFC 871
            F   +N +L E     VV Y DDIL++SKS  +H+ HV++VL  L+N  L +N  KC F 
Sbjct: 552  FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 611

Query: 872  MEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIAS 931
              +V F+G+ +S  G    +E +  +  W  PKN  E+R F G  ++ R+FI   S +  
Sbjct: 612  QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 671

Query: 932  PLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLM 991
            PLN L+KK+V + W   Q  A   +K+ L S P+L   +F     +E DAS V +GAVL 
Sbjct: 672  PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 731

Query: 992  QNQ-----RPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHE 1051
            Q        P+ ++S K++ A L Y   DKE+ A++++L+ W+HYL    + F I TDH 
Sbjct: 732  QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 791

Query: 1052 SLKHLRVQNKL---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR------------ 1111
            +L   R+ N+    N+R A+W  F++ F + I Y+ G  N +ADALSR            
Sbjct: 792  NLIG-RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDS 851

Query: 1112 RYVLLNTLNARLLSFE---HIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGK 1171
                +N +N   ++ +    +   Y +D      + + +K  + +N  L DG L   K +
Sbjct: 852  EDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK-RVEENIQLKDGLLINSKDQ 911

Query: 1172 LCIPS-CSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQ 1231
            + +P+   +   ++++ H  G + H G+    +++   F W  +R  + +    C  C+ 
Sbjct: 912  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 971

Query: 1232 AKSR-LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCH 1291
             KSR  +P+G   P+P    PW  +SMDF+  LP +  GY+++FVVVDRFSKMA  +PC 
Sbjct: 972  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1031

Query: 1292 KTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQT 1351
            K+  A+  A +F + V+   G PK I++D D  F S  W+    K    + +S    PQT
Sbjct: 1032 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1091

Query: 1352 DGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNP-L 1411
            DGQTE  N+T+  +LR +   +  TW D +  ++ +YN  +HS T+ TPFEIV+ ++P L
Sbjct: 1092 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1151

Query: 1412 TPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPG 1471
            +P++L     K   N     +V       + VKE +   N K+    + K ++I  F+PG
Sbjct: 1152 SPLELPSFSDKTDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1211

Query: 1472 DWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPG--KYGVSATFNVVDL 1499
            D V V   K  F   + +KL P   GPF VL++   N Y++DLP   K+  S+TF+V  L
Sbjct: 1212 DLVMVKRTKTGF-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1257

BLAST of CmoCh11G012290 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 6.9e-146
Identity = 308/903 (34.11%), Postives = 492/903 (54.49%), Query Frame = 1

Query: 632  PSLPSDFVVLLQEFEDLFSEEMPSSLP-PLRGIEHKIDFIPGS---PIPNRPAYRTNPKE 691
            P LP     + +EF+D+ +E     LP P++G+E +++    +   PI N P     P +
Sbjct: 372  PELPD----IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPL---PPGK 431

Query: 692  AEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPR 751
             + +  ++++ L  G +RES +  + PV+ VPKK+G+ RM VD + +NK      +P+P 
Sbjct: 432  MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 491

Query: 752  LDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEWLVMPFGLTNAPST 811
            ++ +L ++ G ++FTK+DLKS YH IR+  GDE K AF    G++E+LVMP+G++ AP+ 
Sbjct: 492  IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 551

Query: 812  FMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFC 871
            F   +N +L E     VV Y DDIL++SKS  +H+ HV++VL  L+N  L +N  KC F 
Sbjct: 552  FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 611

Query: 872  MEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIAS 931
              +V F+G+ +S  G    +E +  +  W  PKN  E+R F G  ++ R+FI   S +  
Sbjct: 612  QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 671

Query: 932  PLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLM 991
            PLN L+KK+V + W   Q  A   +K+ L S P+L   +F     +E DAS V +GAVL 
Sbjct: 672  PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 731

Query: 992  QNQ-----RPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWP--KEFIIHTDHE 1051
            Q        P+ ++S K++ A L Y   DKE+ A++++L+ W+HYL    + F I TDH 
Sbjct: 732  QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 791

Query: 1052 SLKHLRVQNKL---NRRHAKWLEFIETFPYVIKYKQGKENIVADALSR------------ 1111
            +L   R+ N+    N+R A+W  F++ F + I Y+ G  N +ADALSR            
Sbjct: 792  NLIG-RITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDS 851

Query: 1112 RYVLLNTLNARLLSFE---HIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFR-KGK 1171
                +N +N   ++ +    +   Y +D      + + +K  + +N  L DG L   K +
Sbjct: 852  EDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDK-RVEENIQLKDGLLINSKDQ 911

Query: 1172 LCIPS-CSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQ 1231
            + +P+   +   ++++ H  G + H G+    +++   F W  +R  + +    C  C+ 
Sbjct: 912  ILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQI 971

Query: 1232 AKSR-LQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCH 1291
             KSR  +P+G   P+P    PW  +SMDF+  LP +  GY+++FVVVDRFSKMA  +PC 
Sbjct: 972  NKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCT 1031

Query: 1292 KTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQT 1351
            K+  A+  A +F + V+   G PK I++D D  F S  W+    K    + +S    PQT
Sbjct: 1032 KSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQT 1091

Query: 1352 DGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNP-L 1411
            DGQTE  N+T+  +LR +   +  TW D +  ++ +YN  +HS T+ TPFEIV+ ++P L
Sbjct: 1092 DGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPAL 1151

Query: 1412 TPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVATRIN-KGRKIVIFKPG 1471
            +P++L     K   N     +V       + VKE +   N K+    + K ++I  F+PG
Sbjct: 1152 SPLELPSFSDKTDENSQETIQV------FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1211

Query: 1472 DWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPG--KYGVSATFNVVDL 1499
            D V V   K  F   + +KL P   GPF VL++   N Y++DLP   K+  S+TF+V  L
Sbjct: 1212 DLVMVKRTKTGF-LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHL 1257

BLAST of CmoCh11G012290 vs. TrEMBL
Match: A4K7M3_ORYSJ (Putative polyprotein OS=Oryza sativa subsp. japonica PE=4 SV=1)

HSP 1 Score: 1656.7 bits (4289), Expect = 0.0e+00
Identity = 828/1527 (54.22%), Postives = 1075/1527 (70.40%), Query Frame = 1

Query: 76   GPGLMRGRDHGRRYHNLQQRVPYDDRIDRN--------------VGSIKLKLPKFYGKTD 135
            G G  RGR+HG       + V    R DR                G +K  +PKF G +D
Sbjct: 93   GRGADRGREHGLEESGTDEEVEQPHRDDRRHRGNRGRNQPNEERFGKLKFTMPKFEGGSD 152

Query: 136  PEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWV 195
            PE YL WE  V+ +F  HN+S+ KKV +   +F  YA IWW+++++ R    +  + SW 
Sbjct: 153  PEVYLTWELKVDKIFRLHNYSERKKVAMAALEFDGYALIWWEQMLNEREEAGQGDVRSWA 212

Query: 196  EFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLELDEDMEALMARF 255
            E K  MR RFVP++++RD+  KLQ LKQG  SV++YYKEM+  M R  + ED E  +ARF
Sbjct: 213  EMKREMRARFVPKHYRRDLFDKLQNLKQGSLSVDEYYKEMEKAMIRANVYEDEEQSIARF 272

Query: 256  LNGLNTEIADKTDLQPYSNIEELLHIAIKIERQIQR--RSQRYSSKTFPNSTSTWKKDSK 315
            ++GL+  I    + Q Y N+ EL+H A K ERQ+Q+  +S R  S +  N+ S  K  S+
Sbjct: 273  MSGLHRNIQRIVEFQQYRNLIELVHQASKAERQLQQDMKSNRGVSFSTKNAASGSKFTSR 332

Query: 316  NIDYK-------------HRNQEINEKPQAKFEKGESSRTGKEKVENNVRNRDLKCWRCQ 375
                +             +      +   A  E+  ++ T    V ++ ++  ++C++C 
Sbjct: 333  GSGNRGAFSSSSGGARSSNYGTSSGKDLAAPNERKNAANTSSTSVGSSTKSSGIQCFKCG 392

Query: 376  GVGHYSRDCPNARIMTIKE-GEIVTDDEAHDDINEETDESEEFSEEDPTHISLVTRRALN 435
            G GH +R+CPN R + + + GE  +  E   + +EE +  E+   E  +  +LV  + L+
Sbjct: 393  GRGHVARECPNNRTIVVNDQGEYESTSEEEQEDSEEENNLEKDICEFESGAALVVTQILS 452

Query: 436  THIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKL 495
              + +    QR NLFQTR  VQ     V+ID GSC N+ S  +V++L LK   HP PY +
Sbjct: 453  VQMSDAENGQRHNLFQTRAKVQDKVVKVIIDGGSCHNLASKEMVEKLGLKLLKHPHPYHV 512

Query: 496  QWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANR 555
            QWLN+ G +++ Q+  V F IG+Y+D + CDV  M V  +LLGRPWQ+DR  ++ G  N+
Sbjct: 513  QWLNNSGSIKIAQRVKVPFKIGEYIDTMECDVAPMTVCHMLLGRPWQYDRSSLHCGRTNQ 572

Query: 556  YSFTHNGRKTTLIPLSPKDVFIDHC-KLEKKRQEADAKAEIEKESSEKKSLSEKQESNTQ 615
            Y+    G++  L P++P+ +  +H  K  + R E+  + +    S+  KS+SE  + N  
Sbjct: 573  YTIKWKGKELILKPMTPQQILAEHLQKSSEVRNESAKEGQKNNLSAPHKSVSESHKPNM- 632

Query: 616  PREKKERKAKSVSLYVRSSEARNVLLS-NQTILVLMCKGSCYFTNMLNPSLPSDFVVLLQ 675
             R+ K+R+ +++ +    SE R+V  +  Q + +L+CK +    N L  S+PS    +LQ
Sbjct: 633  -RDNKKREGENLVMIATKSEMRDVRRNPEQVLFILVCKDTLLSANDLT-SVPSVVARVLQ 692

Query: 676  EFEDLFSEEMPSSLPPLRGIEHKIDFIPGSPIPNRPAYRTNPKEAEEIQRQVSELLAKGY 735
            E+ED+F EE P  LPPLRGIEH+ID IPG+ +PNRPAYRTNP+E +EIQRQV  LL KGY
Sbjct: 693  EYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLDKGY 752

Query: 736  VRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTK 795
            VRESLSPC+VPVILVPKKDGSWRMCVDCRAIN IT++YRHPIPRLDDMLDEL G  +F+K
Sbjct: 753  VRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIFSK 812

Query: 796  IDLKSGYHQIRMHIGDEWKTAFNTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKF 855
            IDL+SG+HQIRM IGDEWKTAF TK+GLYEWLVMPFGLTNAPSTFMRLMNHVLR ++GKF
Sbjct: 813  IDLRSGFHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKF 872

Query: 856  VVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGV 915
            VVVYFDDIL+YSK+L++H+ H++ VL  LR E LY NL+KC+FC ++V FLGFVVS  G+
Sbjct: 873  VVVYFDDILIYSKTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGI 932

Query: 916  EVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEK 975
            +VDE KVKAIKDWPTP+NVS+V+SF GLA FYRRF++ FSTIA+PLNEL KK V+F W +
Sbjct: 933  QVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGE 992

Query: 976  DQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGA 1035
             QE AF  LK++LS  PLL LP+F  TFE+ECDASG+GIG VLMQN +P+ +FSEKL GA
Sbjct: 993  PQEKAFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGGA 1052

Query: 1036 SLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIE 1095
             L Y  YDKELYALVRAL+TWQHYLWPKEF+IH+DHE+LK+L+ Q KLNRRHAKW+EFIE
Sbjct: 1053 QLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIE 1112

Query: 1096 TFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLSFEHIKDLYQHDMFFAPFVESCEKG 1155
            TFPYV+KYK+GKENIVADALSR+ VLLN L  ++   E IK+LY  D+ F+     C  G
Sbjct: 1113 TFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSEPYAKCTAG 1172

Query: 1156 LIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPK 1215
               + Y + DGFLFR  KLC+P CS+R LL++E H GGLM H G  KTYDML++HF+WPK
Sbjct: 1173 KGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPK 1232

Query: 1216 MRHDVHKVCARCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIF 1275
            MR DV ++  RC+ C +AKS+L PHGLY+PLPVP+ PW DISMDFVLGLPRT++G DSIF
Sbjct: 1233 MRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIF 1292

Query: 1276 VVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWG 1335
            VVVDRFSKMAHFIPCHK+DDA HIA LFF E+VRLHG+PK+IVSDRD KFLS+FW+ LW 
Sbjct: 1293 VVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWA 1352

Query: 1336 KLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHST 1395
            KLGT+L++STTCHPQTDGQTEVVNRT++ +LRA+I KNLK WE+CLP +EFAYNR VHST
Sbjct: 1353 KLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHST 1412

Query: 1396 TKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVAT 1455
            T   PFE+VYGF PL+PIDLLP+P +E  + +A+ +  +V K+H++ KE IEK++   A 
Sbjct: 1413 TNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAA 1472

Query: 1456 RINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGK 1515
              NK RK V F+PGD VWVH RK+RFP +RKSKL+PRGDGPF+VL +INDNAYKI+LP  
Sbjct: 1473 WANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPED 1532

Query: 1516 YGVSATFNVVDLSP-FDVGDGLDSRTNPSQEGEND-----MNHDQGISIP--------QG 1557
            YGVS+TFNV DL+P F + D   SR+ P QEGE+D     ++       P        QG
Sbjct: 1533 YGVSSTFNVADLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSSTKQPSSNTKDTIQG 1592

BLAST of CmoCh11G012290 vs. TrEMBL
Match: Q5NRP4_SOLDE (Putative gag-pol polyprotein, identical OS=Solanum demissum GN=SDM1_58t00004 PE=4 SV=1)

HSP 1 Score: 1645.2 bits (4259), Expect = 0.0e+00
Identity = 825/1519 (54.31%), Postives = 1071/1519 (70.51%), Query Frame = 1

Query: 103  DRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWW 162
            D N+ SIK+K+  F G  DP+ YL WE+ VE++F+CHN+S+ KKV L + +F  YA  WW
Sbjct: 111  DDNINSIKMKMSSFKGTRDPDLYLDWERRVEAIFDCHNYSEGKKVKLAVVEFSDYAASWW 170

Query: 163  DKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMD 222
             KL   R +    PI +W E K  MRKRF+P YFQRD+  +LQ LKQG  SV++Y+K MD
Sbjct: 171  KKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDLQSRLQRLKQGSMSVDEYFKSMD 230

Query: 223  TLMDRLELDEDMEALMARFLNGLNTEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRY 282
              M +    E+ EA +ARFLNGLNTEIA+  ++Q Y  ++EL+ +++K+E+QI+++ Q  
Sbjct: 231  MAMIQANCMEEEEATIARFLNGLNTEIANVVEIQQYVTLDELVDLSVKVEKQIEKKQQNN 290

Query: 283  SSKTFPNSTSTWKKDSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVENNVRNRDLKC 342
            S ++ PN+ S  KK     + K  ++  +++ + K EKG  +   K    ++     ++C
Sbjct: 291  SWRSRPNTIS--KKPWSTQEGKAPSKPQDDRGKGKVEKGGKTFNPKSSKPSS----SIQC 350

Query: 343  WRCQGVGHYSRDCPNARIMTIKEGEIVTDDEAHDDINEETDESEEFSEEDPTHISL---- 402
             +C G GH   +CP+ R + ++E      +++      E +E E  SEED   +      
Sbjct: 351  HKCHGRGHMMHECPSRRNILLRENGEYESEKSE----REEEEGEGVSEEDDLELPNDGII 410

Query: 403  -VTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQ 462
             V RR +  ++      QRENLF TRC ++    S++ID GSC NVVSS LV +L +   
Sbjct: 411  GVVRRIMTINLGSVDEGQRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIACM 470

Query: 463  PHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRV 522
                PY+LQWLNDCGEV+V +Q ++SF +G+Y D++LCDVV M    +LLGRPWQ+DR  
Sbjct: 471  KRSTPYRLQWLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDT 530

Query: 523  MYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKK--RQEADAKAEIE-----KESS 582
             + G  NRYS  HNG+K TL PLSP  VF D  +L +   +Q+ + K+E+E     +E  
Sbjct: 531  THHGRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEIE 590

Query: 583  EKKSLSEKQ-ESNTQPREKKE---------------RKAKSVSLYVRSSEARNVLLSNQT 642
            +KK   EK+ E +   +E KE               ++ K+ SLY+++ E  N       
Sbjct: 591  KKKDGREKEREGSDLSKEVKEGVSKKIKCFGERKEAKEKKNESLYIKAKECLNARREGLP 650

Query: 643  ILVLMCKGSCYFTNMLNPSLPSDFVVLLQEFEDLFSEEMPSSLPPLRGIEHKIDFIPGSP 702
            I++L  K        L PSLP+    LLQ FED+F ++ P  LPPLRGIEH+IDF+PGS 
Sbjct: 651  IILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGSQ 710

Query: 703  IPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAI 762
            +PNRPAYR+NP+E +E+QRQV ELL KG+VRES+SPCSVPV+LVPKKDG+WRMCVDCRAI
Sbjct: 711  LPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRAI 770

Query: 763  NKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEW 822
            NKIT+KYRHPIPRLDDMLD+L G  +F+KIDLKSGYHQIR++ GDEWKTAF TKYGLYEW
Sbjct: 771  NKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEW 830

Query: 823  LVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRN 882
            LVMPFGLTNAPSTFMRLMNHV +++ GKF+VVYFDDIL++S++LD+H+ H++ V   LRN
Sbjct: 831  LVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRN 890

Query: 883  ECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASF 942
            + L+ NLKKC+FC+++V FLGFVVSS GVEVD+EK+KAIK+WP P +V+EVRSFHGLASF
Sbjct: 891  QRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASF 950

Query: 943  YRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIE 1002
            YRRF+++FSTIA+PL E++KK+  F W K+Q+ AFN LK+KL SAPLL LP+F  +FE+E
Sbjct: 951  YRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEVE 1010

Query: 1003 CDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFI 1062
            CDASG GIGAVLMQ+ +P+ +FSEKL+GA+L Y T DKELYAL                 
Sbjct: 1011 CDASGKGIGAVLMQDSKPIAYFSEKLSGATLNYSTNDKELYAL----------------- 1070

Query: 1063 IHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLN 1122
                         Q KL+RRHAKW+EFIETFPYVI YKQGKEN+VADALSRRYVL++TL 
Sbjct: 1071 ------------SQGKLSRRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTLT 1130

Query: 1123 ARLLSFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLV 1182
            ++LL F+ IK LY +D  F      C+ G   + + L D FLF++ KLC+P+CS+REL V
Sbjct: 1131 SKLLGFDQIKFLYANDSDFGEIFAECKLGPF-EKFNLQDEFLFKENKLCVPNCSLRELFV 1190

Query: 1183 REAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKSRLQPHGLYSPL 1242
            REAH GGLM H GV KT ++LSEHF+WP MR DV KVC+ C+ CKQAKSR  PHGLY+PL
Sbjct: 1191 REAHCGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTPL 1250

Query: 1243 PVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFRE 1302
            PV N PWIDISMDF+LGLPRT+ G DSIFVVVDRFSKMA FIPC KT+DA H+ADLF +E
Sbjct: 1251 PVSNSPWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADLFVKE 1310

Query: 1303 VVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAML 1362
            VV+LHGIP++IVSDRD KFLSHFWR+LWGKLGTKL++ST+CHPQTDGQTEVVNRT+  ML
Sbjct: 1311 VVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNML 1370

Query: 1363 RAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNF 1422
            RAI+   L +WED LP +EFAYNR  HS+T  TPFE+VYGFNPLTP+DLLP+P+ +F N 
Sbjct: 1371 RAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANL 1430

Query: 1423 DANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRK 1482
            D   K + + K+H+Q +  IEK+N +VA R NKGRK VIFKPGD VWVH RKERFP++RK
Sbjct: 1431 DGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRK 1490

Query: 1483 SKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPFDVGDGLDSRTNPSQEG 1542
            +KL PRG GP++VLERI DNAYK+DLPG++ VSATFNV DLS +D    LDSRTN  QE 
Sbjct: 1491 TKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHYDA--DLDSRTNSLQEE 1550

Query: 1543 END---------MNHDQGISIPQGPITRTRAKKLQQT---LYSYIQAMVSSSKEILEDAG 1578
             ND          + D  +  P+ PITR++ K+       L S IQ  +   +E+     
Sbjct: 1551 GNDSIQGSSTPLKDKDDALETPRRPITRSQTKEFNDKLNGLQSLIQRFLIGEEELKPKGE 1587

BLAST of CmoCh11G012290 vs. TrEMBL
Match: Q5NRP7_SOLDE (Putative gag-pol polyprotein, identical OS=Solanum demissum GN=SDM1_58t00003 PE=4 SV=1)

HSP 1 Score: 1644.0 bits (4256), Expect = 0.0e+00
Identity = 825/1519 (54.31%), Postives = 1071/1519 (70.51%), Query Frame = 1

Query: 103  DRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWW 162
            D N+ SIK+K+  F G  DP+ YL WE+ VE++F+CHN+S+ KKV L + +F  YA  WW
Sbjct: 111  DDNINSIKMKMSSFKGTRDPDLYLDWERRVEAIFDCHNYSEGKKVKLAVVEFSDYAASWW 170

Query: 163  DKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMD 222
             KL   R +    PI +W E K  MRKRF+P YFQRD+  +LQ LKQG  SV++Y+K MD
Sbjct: 171  KKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDLQSRLQRLKQGSMSVDEYFKSMD 230

Query: 223  TLMDRLELDEDMEALMARFLNGLNTEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRY 282
              M +    E+ EA +ARFLNGLNTEIA+  ++Q Y  ++EL+ +++K+E+QI+++ Q  
Sbjct: 231  MAMIQANCMEEEEATIARFLNGLNTEIANVVEIQQYVTLDELVDLSVKVEKQIEKKQQNN 290

Query: 283  SSKTFPNSTSTWKKDSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVENNVRNRDLKC 342
            S ++ PN+ S  KK     + K  ++  +++ + K EKG  +   K    ++     ++C
Sbjct: 291  SWRSRPNTIS--KKPWSTQEGKAPSKPQDDRGKGKVEKGGKTFNPKSSKPSS----SIQC 350

Query: 343  WRCQGVGHYSRDCPNARIMTIKEGEIVTDDEAHDDINEETDESEEFSEEDPTHISL---- 402
             +C G GH   +CP+ R + ++E      +++      E +E E  SEED   +      
Sbjct: 351  HKCHGRGHMMHECPSRRNILLRENGEYESEKSE----REEEEGEGVSEEDDLELPNDGII 410

Query: 403  -VTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQ 462
             V RR +  ++      QRENLF TRC ++    S++ID GSC NVVSS LV +L +   
Sbjct: 411  GVVRRIMTINLGSVDEGQRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIACM 470

Query: 463  PHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRV 522
                PY+LQWLNDCGEV+V +Q ++SF +G+Y D++LCDVV M    +LLGRPWQ+DR  
Sbjct: 471  KRSTPYRLQWLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDT 530

Query: 523  MYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKK--RQEADAKAEIE-----KESS 582
             + G  NRYS  HNG+K TL PLSP  VF D  +L +   +Q+ + K+E+E     +E  
Sbjct: 531  THHGRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEIE 590

Query: 583  EKKSLSEKQ-ESNTQPREKKE---------------RKAKSVSLYVRSSEARNVLLSNQT 642
            +KK   EK+ E +   +E KE               ++ K+ SLY+++ E  N       
Sbjct: 591  KKKDGREKEREGSDLSKEVKEGVSKKIKCFGERKEAKEKKNESLYIKAKECLNARREGLP 650

Query: 643  ILVLMCKGSCYFTNMLNPSLPSDFVVLLQEFEDLFSEEMPSSLPPLRGIEHKIDFIPGSP 702
            I++L  K        L PSLP+    LLQ FED+F ++ P  LPPLRGIEH+IDF+PGS 
Sbjct: 651  IILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGSQ 710

Query: 703  IPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAI 762
            +PNRPAYR+NP+E +E+QRQV ELL KG+VRES+SPCSVPV+LVPKKDG+WRMCVDCRAI
Sbjct: 711  LPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRAI 770

Query: 763  NKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEW 822
            NKIT+KYRHPIPRLDDMLD+L G  +F+KIDLKSGYHQIR++ GDEWKTAF TKYGLYEW
Sbjct: 771  NKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEW 830

Query: 823  LVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRN 882
            LVMPFGLTNAPSTFMRLMNHV +++ GKF+VVYFDDIL++S++LD+H+ H++ V   LRN
Sbjct: 831  LVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRN 890

Query: 883  ECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASF 942
            + L+ NLKKC+FC+++V FLGFVVSS GVEVD+EK+KAIK+WP P +V+EVRSFHGLASF
Sbjct: 891  QRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASF 950

Query: 943  YRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIE 1002
            YRRF+++FSTIA+PL E++KK+  F W K+Q+ AFN LK+KL SAPLL LP+F  +FE+E
Sbjct: 951  YRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEVE 1010

Query: 1003 CDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFI 1062
            CDASG GIGAVLMQ+ +P+ +FSEKL+GA+L Y T DKELYAL                 
Sbjct: 1011 CDASGKGIGAVLMQDSKPIAYFSEKLSGATLNYSTNDKELYAL----------------- 1070

Query: 1063 IHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLN 1122
                         Q KL+RRHAKW+EFIETFPYVI YKQGKEN+VADALSRRYVL++TL 
Sbjct: 1071 ------------SQGKLSRRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTLT 1130

Query: 1123 ARLLSFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLV 1182
            ++LL F+ IK LY +D  F      C+ G   + + L D FLF++ KLC+P+CS+REL V
Sbjct: 1131 SKLLGFDQIKFLYANDSDFGEIFAECKLGPF-EKFNLQDEFLFKENKLCVPNCSLRELFV 1190

Query: 1183 REAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKSRLQPHGLYSPL 1242
            REAH GGLM H GV KT ++LSEHF+WP MR DV KVC+ C+ CKQAKSR  PHGLY+PL
Sbjct: 1191 REAHCGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTPL 1250

Query: 1243 PVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFRE 1302
            PV N PWIDISMDF+LGLPRT+ G DSIFVVVDRFSKMA FIPC KT+DA H+ADLF +E
Sbjct: 1251 PVSNFPWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADLFVKE 1310

Query: 1303 VVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAML 1362
            VV+LHGIP++IVSDRD KFLSHFWR+LWGKLGTKL++ST+CHPQTDGQTEVVNRT+  ML
Sbjct: 1311 VVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNML 1370

Query: 1363 RAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNF 1422
            RAI+   L +WED LP +EFAYNR  HS+T  TPFE+VYGFNPLTP+DLLP+P+ +F N 
Sbjct: 1371 RAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANL 1430

Query: 1423 DANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRK 1482
            D   K + + K+H+Q +  IEK+N +VA R NKGRK VIFKPGD VWVH RKERFP++RK
Sbjct: 1431 DGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRK 1490

Query: 1483 SKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPFDVGDGLDSRTNPSQEG 1542
            +KL PRG GP++VLERI DNAYK+DLPG++ VSATFNV DLS +D    LDSRTN  QE 
Sbjct: 1491 TKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHYDA--DLDSRTNSLQEE 1550

Query: 1543 END---------MNHDQGISIPQGPITRTRAKKLQQT---LYSYIQAMVSSSKEILEDAG 1578
             ND          + D  +  P+ PITR++ K+       L S IQ  +   +E+     
Sbjct: 1551 GNDSIQGSSTPLKDKDDALETPRRPITRSQTKEFNDKLNGLQSLIQRFLIGEEELKPKGE 1587

BLAST of CmoCh11G012290 vs. TrEMBL
Match: Q8L7J3_MAIZE (Gag-pol polyprotein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 1626.3 bits (4210), Expect = 0.0e+00
Identity = 815/1524 (53.48%), Postives = 1045/1524 (68.57%), Query Frame = 1

Query: 65   SDHHEDNPHAVGPGLMRGRDHGRRYHNLQQRVPYDDRIDRNVGSIKLKLPKFYGKTDPEE 124
            +D  +D+  A  P   R R + R      +R  + +  D     +K K+P F GK DP+ 
Sbjct: 107  ADTEQDDQEA--PNRRRLRTNRRGMGGFHRREVHGN--DDAFSKVKFKIPPFDGKYDPDA 166

Query: 125  YLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWVEFK 184
            Y+ WE  V+  F CH F +  +V    ++F ++A +WW   +   ++N      +W   K
Sbjct: 167  YITWEIAVDQKFACHEFPENARVRAATSEFTEFASVWW---IEHGKKNPNNMPQTWDALK 226

Query: 185  ESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLELDEDMEALMARFLNG 244
              MR RFVP Y+ RDM  KLQ L+QG KSVE+YY+E+   M R  ++E  E+ MARFL G
Sbjct: 227  RVMRARFVPSYYARDMLNKLQQLRQGTKSVEEYYQELQMGMLRCNIEEGEESAMARFLGG 286

Query: 245  LNTEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRYSSKTFPNSTSTWKK-------- 304
            LN EI D    + Y+N+  L H+A K ER++Q R     S      ++ W++        
Sbjct: 287  LNREIQDILAYKDYANVTRLFHLACKAEREVQGRRASARSNVSAGKSTPWQQRTTTSMTG 346

Query: 305  ----DSKNIDYKHRNQEINEKPQAKFEKGESSRTGK-----EKVENNVRNRDLKCWRCQG 364
                 + +          ++KP+A      +    K       V +  R RD+ C+RC+G
Sbjct: 347  RTLAPTPSPSRPAPPPSSSDKPRASSTNSATKSAQKPAGSASSVASTGRTRDVLCYRCKG 406

Query: 365  VGHYSRDCPNARIMTIKEGEIVTD----DEAH------DDINEETDESEEFSEEDPTHI- 424
             GH  RDCPN R++ +K+    +     DEA       DD   +    E+   +D  H  
Sbjct: 407  YGHVQRDCPNQRVLVVKDDGGYSSASDLDEATLALLAADDAGTKEPPEEQIGADDAEHYE 466

Query: 425  SLVTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKT 484
            SL+ +R L+  +++   +QR  LFQT+C+++   C ++ID GSC N+ SS +V++L L T
Sbjct: 467  SLIVQRVLSAQMEKAEQNQRHTLFQTKCVIKERSCRLIIDGGSCNNLASSDMVEKLALTT 526

Query: 485  QPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRR 544
            +PHP PY +QWLN+ G+V+VT+   ++F IG Y D V CDVV M   ++LLGRPWQFD  
Sbjct: 527  KPHPHPYHIQWLNNSGKVKVTKLVRINFAIGSYRDVVDCDVVPMDACNILLGRPWQFDSD 586

Query: 545  VMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKKRQEADAKAEIEKESSEKKSLS 604
             M+ G +N+YS  H+ +K  L+P+SP+ +  D            AKA   K  + K    
Sbjct: 587  CMHHGRSNQYSLIHHDKKIILLPMSPEAIVRDDV----------AKATKAKTENNK---- 646

Query: 605  EKQESNTQPREKKERKAKSVSLYVRSSEARNVLLSNQTILVLMCKGSCYFTNMLNPSLPS 664
                       K   K K   L    ++   +  S      L+CK +      +  SLP 
Sbjct: 647  ---NIKVVGNNKDGIKLKGHCLLATKTDVNELFASTTVAYALVCKDALISIQDMQHSLPP 706

Query: 665  DFVVLLQEFEDLFSEEMPSSLPPLRGIEHKIDFIPGSPIPNRPAYRTNPKEAEEIQRQVS 724
                +LQE+ D+F  E+P  LPP+RGIEH+ID IPG+ +PNR  YRTNP+E +EIQRQV 
Sbjct: 707  VITNILQEYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQ 766

Query: 725  ELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELH 784
            ELL KGYVRESLSPC+VPVILVPKKDG+WRMCVDCRAIN ITI+YRHPIPRLDDMLDEL 
Sbjct: 767  ELLDKGYVRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELS 826

Query: 785  GCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 844
            G  +F+K+DL+SGYHQIRM +GDEWKTAF TK+GLYEWLVMPFGLTNAPSTFMRLMN VL
Sbjct: 827  GAIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVL 886

Query: 845  REYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF 904
            R ++GKFVVVYFDDIL+YSKS+D+H+ H+R V   LR+  L+ NL+KC+FC ++V+FLG+
Sbjct: 887  RAFIGKFVVVYFDDILIYSKSMDEHVDHMRAVFNALRDARLFGNLEKCTFCTDRVSFLGY 946

Query: 905  VVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 964
            VV+  G+EVD+ KV+AI  WP PK +++VRSF GLA FYRRF+K+FSTIA+PLNEL KK 
Sbjct: 947  VVTPQGIEVDQAKVEAIHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKG 1006

Query: 965  VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFF 1024
            V F W K QE AFN LK+KL+ APLL LP+F  TFE+ECDASG+G+G VL+Q  +P+ +F
Sbjct: 1007 VHFSWGKVQEHAFNVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYF 1066

Query: 1025 SEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHA 1084
            SEKL+G+ L Y TYDKELYALVR L+TWQHYLWPKEF+IH+DHESLKH+R Q KLNRRHA
Sbjct: 1067 SEKLSGSVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHA 1126

Query: 1085 KWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLSFEHIKDLYQHDMFFAPF 1144
            KW+EFIE+FPYVIK+K+GKENI+ADALSRRY LLN L+ ++   E IKD Y HD  F   
Sbjct: 1127 KWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIKDQYVHDADFKDV 1186

Query: 1145 VESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLS 1204
            +  C+ G   + Y++ DGF+FR  KLCIP+ S+R LL++EAHGGGLM H G  KT D+L+
Sbjct: 1187 LLHCKDGKGWNKYIVSDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDILA 1246

Query: 1205 EHFFWPKMRHDVHKVCARCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTR 1264
             HFFWPKMR DV ++ ARC  C++AKSRL PHGLY PLPVP+ PW DISMDFVLGLPRTR
Sbjct: 1247 GHFFWPKMRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTR 1306

Query: 1265 KGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSH 1324
            KG DS+FVVVDRFSKMAHFIPCHKTDDA HIADLFFRE+VRLHG+P +IVSDRD KFLSH
Sbjct: 1307 KGRDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSH 1366

Query: 1325 FWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAY 1384
            FWR LW KLGTKL++STTCHPQTDGQTEVVNRT++ MLRA++ KN+K WEDCLP IEFAY
Sbjct: 1367 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAY 1426

Query: 1385 NRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEK 1444
            NR +HSTTK  PF+IVYG  P  PIDL+P+PS E +NFDA  + E + KLH+  KE IE+
Sbjct: 1427 NRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIER 1486

Query: 1445 QNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAY 1504
             N++     +KGRK + F+PGD VW+H RKERFP  RKSKLLPR DGPF+VLE+INDNAY
Sbjct: 1487 MNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAY 1546

Query: 1505 KIDLPGKYGVSATFNVVDLSPFDVGD--GLDSRTNPSQEGENDMN-HDQGISIP-----Q 1553
            ++DLP  +GVS TFN+ DL P+ +G+   L+SRT   QEGEND + H    SIP      
Sbjct: 1547 RLDLPADFGVSPTFNIADLKPY-LGEEVELESRTTQMQEGENDEDIHTTDASIPIQVPIS 1605

BLAST of CmoCh11G012290 vs. TrEMBL
Match: Q94I07_ORYSJ (Putative retroelement OS=Oryza sativa subsp. japonica GN=LOC_Os10g16560 PE=4 SV=1)

HSP 1 Score: 1610.1 bits (4168), Expect = 0.0e+00
Identity = 798/1466 (54.43%), Postives = 1019/1466 (69.51%), Query Frame = 1

Query: 103  DRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWW 162
            D     IK K+P F GK DP+ YL WE  V+  F CH F +  +V    ++F  +A +WW
Sbjct: 147  DDAFSKIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPESTRVRAATSEFTDFASVWW 206

Query: 163  DKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMD 222
               +   ++N      +W   K  MR RFVP Y+ RD+  +LQ L+QG KSVE+YY+E+ 
Sbjct: 207  ---IEHGKKNPNNMPQTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQ 266

Query: 223  TLMDRLELDEDMEALMARFLNGLNTEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRY 282
              + R  L+E  +A MARFL GLN EI D  D + Y+N+  L H+A K ER++Q R    
Sbjct: 267  MGLLRCNLEETEDAAMARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQGRRASA 326

Query: 283  SSKTFPNSTSTWKKDSKNIDYKHRNQEINEKPQAK-----------FEKGESSRTGKEKV 342
             +      TS+W+  ++      R    +  P                K          +
Sbjct: 327  KANFSAGKTSSWQ--TRTTPPAGRTASPSSTPTTSRAAPPPSSDKSATKAAQPAPSASSM 386

Query: 343  ENNVRNRDLKCWRCQGVGHYSRDCPNARIMTIK-EGEIVTDDEAHDDINEETDESEEFSE 402
             +  R RD++C RC+G GH  RDCP+ R++ +K +GE  +  +  DD           +E
Sbjct: 387  ASTGRMRDVQCHRCKGFGHVQRDCPSKRVLVVKNDGEYSSASDFDDDTLALLAADHADNE 446

Query: 403  EDPTHI---------SLVTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCT 462
                HI         SL+ +R L+  +++   +QR  LFQT+C+V+   C ++ID GSC 
Sbjct: 447  PPEEHIGAAFADHYESLIVQRVLSAQMEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCN 506

Query: 463  NVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMH 522
            N+ SS +V++L L T+PHP PY +QWLN+ G+ +VT+   ++F IG Y D V CDVV M 
Sbjct: 507  NLASSEMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHINFAIGNYHDVVECDVVPMQ 566

Query: 523  VGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDH-CKLEKKRQEAD 582
              ++LLGRPWQFDR  M+ G +N+YSF ++ +K  L  +SP+D+  D   K  K + E+D
Sbjct: 567  ACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHSMSPEDILRDDVAKAAKSKCESD 626

Query: 583  AKAEIEKESSEKKSLSEKQESNTQPREKKERKAKSVSLYVRSSEARNVLLSNQTILVLMC 642
             KA+ + +  E  +L  K                   L    S+   ++ S      L+C
Sbjct: 627  KKAQSDGKKPETINLKPK------------------CLLATKSDINELIASPSVAYALVC 686

Query: 643  KGSCYFTNMLNPSLPSDFVVLLQEFEDLFSEEMPSSLPPLRGIEHKIDFIPGSPIPNRPA 702
            K +    + +  SLP     +LQE+ D+F +E+P  LPP+RGIEH+ID IPG+ +PNR  
Sbjct: 687  KDALISLHDMQHSLPPAVANILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAP 746

Query: 703  YRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIK 762
            YRTNP+E +EIQRQV ELL KGYVRESLSPC+VPVILVPKKDGSWRMCVDCRAIN ITI+
Sbjct: 747  YRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIR 806

Query: 763  YRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEWLVMPFG 822
            YRHPIPRLDDMLDEL G  +F+K+DL+SGYHQIRM +GDEWKTAF TK+GLYEWLVMPFG
Sbjct: 807  YRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFG 866

Query: 823  LTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVN 882
            LTNAPSTFMRLMN VLR ++GKFVVVYFDDIL+YSKS+ +H  H+R V   LR+  L+ N
Sbjct: 867  LTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGN 926

Query: 883  LKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIK 942
            L+KC+FC ++V+FLG+VV+  G+EVD+ KV+AI+ WPTPK VS+VRSF GLA FYRRF++
Sbjct: 927  LEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQ 986

Query: 943  NFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGV 1002
            +FSTIA+PLN L KK V F W   QE AF+ LK+KL+ APLL LP+F  TFE+ECDASG+
Sbjct: 987  DFSTIAAPLNVLTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGI 1046

Query: 1003 GIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHE 1062
            G+G VL+Q  +P+ +FSEKL+G  L Y TYDKELYALVR L+TWQHYLWPKEF+IH+DHE
Sbjct: 1047 GLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHE 1106

Query: 1063 SLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLSF 1122
            SLKH+R Q KLNRRHAKW+EFIE+FPYVIK+K+GKENI+ADALSRRY LL  L+ ++   
Sbjct: 1107 SLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGL 1166

Query: 1123 EHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGG 1182
            E IKD Y HD  F   +  C+ G   + +++ DGF+FR  KLCIP+ S+R LL++EAHGG
Sbjct: 1167 ETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGG 1226

Query: 1183 GLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKSRLQPHGLYSPLPVPNGP 1242
            GLM H G  KT+D+L+ HFFWP+MR DV +  ARC  C++AKSRL PHGLY PLPVP  P
Sbjct: 1227 GLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVP 1286

Query: 1243 WIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHG 1302
            W DISMDFVLGLPRT++G DSIFVVVDRFSKMAHFIPCHKTDDA HIADLFFRE+VRLHG
Sbjct: 1287 WEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVRLHG 1346

Query: 1303 IPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDK 1362
            +P +IVSDRD KFLSHFWR LW KLGTKL++STTCHPQTDGQTEVVNRT++ MLRA++ K
Sbjct: 1347 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKK 1406

Query: 1363 NLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKV 1422
            N+K WE+CLP IEFAYNR +HSTTK  PF+IVYG  P  PIDL+P+PS E +NFDA  + 
Sbjct: 1407 NIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRA 1466

Query: 1423 EFVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKLLPR 1482
            E + KLH+  KE IE+ N+K     +KGR+ + F+PGD VW+H RKERFP  RKSKL+PR
Sbjct: 1467 ELMLKLHETTKENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLMPR 1526

Query: 1483 GDGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPF-DVGDGLDSRTNPSQEGEN--D 1540
             DGPF+VL +IN+NAYKIDLP  +GVS TFNV DL P+    D L+SRT   QEGE+  D
Sbjct: 1527 ADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEEDELESRTTQMQEGEDDED 1586

BLAST of CmoCh11G012290 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-22
Identity = 54/132 (40.91%), Postives = 78/132 (59.09%), Query Frame = 1

Query: 842 ITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF--VVSSNGVEVDEEKVKAIKDWPTP 901
           + H+  VL        Y N KKC+F   ++ +LG   ++S  GV  D  K++A+  WP P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 902 KNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSA 961
           KN +E+R F GL  +YRRF+KN+  I  PL EL+KKN S  W +   LAF  LK  +++ 
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTL 120

Query: 962 PLLALPNFESTF 972
           P+LALP+ +  F
Sbjct: 121 PVLALPDLKLPF 131

BLAST of CmoCh11G012290 vs. TAIR10
Match: AT2G15180.1 (AT2G15180.1 Zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 51.2 bits (121), Expect = 6.7e-06
Identity = 24/70 (34.29%), Postives = 36/70 (51.43%), Query Frame = 1

Query: 125 YLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWVEFK 184
           YLQWE  +   F  H+ + E K+ + + Q K  A  WWD+   +R     API +W   K
Sbjct: 119 YLQWESNMNYYFEFHSTAQEDKLSIALGQLKGSALWWWDQDEYNRWYERRAPIRTWERLK 178

Query: 185 ESMRKRFVPQ 195
            +M  ++ PQ
Sbjct: 179 WNMCAKYSPQ 188

BLAST of CmoCh11G012290 vs. TAIR10
Match: AT1G40129.1 (AT1G40129.1 unknown protein)

HSP 1 Score: 51.2 bits (121), Expect = 6.7e-06
Identity = 36/150 (24.00%), Postives = 67/150 (44.67%), Query Frame = 1

Query: 119 KTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPID 178
           ++  E+YL+WEK ++  F+  NF  E + +  ++     A  WW + +  R    E PI 
Sbjct: 85  QSRKEDYLEWEKNMDEWFSYKNFLSEMRFVCALSHLTGNAYKWWLQEVEDRLYYKEPPIT 144

Query: 179 SWVEFKESMRKRFVPQYFQRDMAQKLQA---LKQGRKSVEDYYKEMDTLMDRLELDEDME 238
            W + KE +R ++  Q   R     + A     Q ++ V   Y + + + ++   DE   
Sbjct: 145 LWRDLKEFLRNKYALQVSNRSRKVSITAQGLAAQEKEQVLAPYSKKNPIAEQQLKDE--- 204

Query: 239 ALMARFLNGLNTEIADKTDLQPYSNIEELL 266
             + + LN  N     K+  QP    +E++
Sbjct: 205 --ILKILNAYNKPKKAKSTSQPKMVTKEVV 229

BLAST of CmoCh11G012290 vs. NCBI nr
Match: gi|923807396|ref|XP_013689613.1| (PREDICTED: uncharacterized protein LOC106393458 [Brassica napus])

HSP 1 Score: 1711.8 bits (4432), Expect = 0.0e+00
Identity = 838/1479 (56.66%), Postives = 1079/1479 (72.95%), Query Frame = 1

Query: 31   EELTDRIGRLEIQNQARQRIPQPTPSTDTYEGDNSDHHEDNPHAVGPGLMRGRDHGRRYH 90
            +EL    G+       R R   PTP    + G    ++  + H           +     
Sbjct: 623  QELRQATGQGHSNESRRNR---PTPIRQEHAGSQETNNYYSRHRTEHNPTERSSYSSELS 682

Query: 91   NLQQRVPYDDRIDRN--VGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVL 150
              + R  +D R  R   +  +KLK+P F+GK DP+ YL+WEK +E VFNC ++S+ +++ 
Sbjct: 683  RGRSRREHDGRGSRKDKLSGLKLKIPSFHGKVDPDAYLEWEKKIELVFNCQHYSNAQRIK 742

Query: 151  LCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALK 210
            +    F  YA  WWD+L+++RR N E P+DSW E K  MRKRFVP ++ RD+ QKL+ L 
Sbjct: 743  IAATGFYDYALSWWDQLVTTRRLNQENPVDSWHEMKSLMRKRFVPSHYHRDLHQKLRRLT 802

Query: 211  QGRKSVEDYYKEMDTLMDRLELDEDMEALMARFLNGLNTEIADKTDLQPYSNIEELLHIA 270
            QG ++VE+YY++M+ LM R  + ED EA MARFL GLN EI D  ++Q Y  IEE+LH A
Sbjct: 803  QGTRTVEEYYQDMELLMLRASILEDREATMARFLGGLNREIQDNVEMQHYVEIEEMLHKA 862

Query: 271  IKIERQIQRR--SQRYSSKTFPNST---STWKKDSKNIDYKHRNQEINEKPQAKFEKGES 330
            I +E+Q++R+  S+ Y S  F +S    +++ KDSK        Q+   KP + + K + 
Sbjct: 863  ILVEQQLKRKGNSRSYGSSKFHHSKEEKTSYLKDSKP------QQKEETKPSSTYSKDQ- 922

Query: 331  SRTGKEKVENNVRNRDLKCWRCQGVGHYSRDCPNARIMTIKE-GEIVTDDEAHDDINEET 390
               GK ++ ++ R RD+KC++CQG GHY+ +C N  +M + E GE  +++E       + 
Sbjct: 923  ---GKAEITSS-RTRDVKCFKCQGRGHYANECTNKNVMILLENGEYESEEEK---FGSDH 982

Query: 391  DESEEFSEEDPTHISL-VTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCT 450
            +ESEE SE +P    L VTRR LN   K   L+QRENLF TRC+VQ   CS++ID GSC 
Sbjct: 983  EESEEESEVEPVKGRLLVTRRLLNLQAKNGELEQRENLFYTRCMVQGKVCSLIIDGGSCV 1042

Query: 451  NVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMH 510
            NV S  +VK+L LK Q HPR Y+LQWLN+ GE+RV+ Q LV   IG+Y D+VLCDV+ M 
Sbjct: 1043 NVASETMVKKLGLKIQKHPRSYRLQWLNEEGEMRVSTQVLVPIAIGRYEDEVLCDVLPME 1102

Query: 511  VGDLLLGRPWQFDRRVMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKKRQEADA 570
               +LLGRPWQ+DRRV +DG+ N++SF  NG+KT L+PLSPK+V  D  +L+KK++    
Sbjct: 1103 ASHILLGRPWQYDRRVSHDGFTNKHSFEFNGKKTVLVPLSPKEVREDQLQLQKKKE---- 1162

Query: 571  KAEIEKESSEKKSLSEKQESNTQPREKKERKAKSVSLYVRSSEARNVLLSNQTILVLMCK 630
                       K +  K + N           K  SLY +  + + +L S  +I++L+ K
Sbjct: 1163 -----------KEIDLKPDHN-----------KHHSLYAKPGDIKRILYSQNSIILLIFK 1222

Query: 631  GSCYFTNMLNPSLPSDFVVLLQEFEDLFSEEMPSSLPPLRGIEHKIDFIPGSPIPNRPAY 690
             +        P  PS+ V +LQE+ D+F ++ P  LPP+RGIEH+IDF+PG  +PNRPAY
Sbjct: 1223 ETLLTVTDHTPDHPSELVFILQEYADVFPDDSPIGLPPVRGIEHQIDFVPGCTLPNRPAY 1282

Query: 691  RTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKY 750
            RTNP E +E+Q+QV EL+ KG++RESLSPC+VPV+LVPKKDGSWRMCVDCRAIN IT+KY
Sbjct: 1283 RTNPVETKELQKQVEELMEKGHIRESLSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKY 1342

Query: 751  RHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEWLVMPFGL 810
            RHPIPRLDDMLDELHG  +F+KIDLKSGYHQIRM  GDEWKTAF TK+GLYEWLVMPFGL
Sbjct: 1343 RHPIPRLDDMLDELHGSCIFSKIDLKSGYHQIRMKEGDEWKTAFKTKHGLYEWLVMPFGL 1402

Query: 811  TNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNL 870
            TNAPSTFMRLMNH+LR ++G FVVVYFDDILVYSK L+DHI H+R VL  LR E LY NL
Sbjct: 1403 TNAPSTFMRLMNHILRSFIGIFVVVYFDDILVYSKCLEDHIEHLRAVLDVLRKEKLYANL 1462

Query: 871  KKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKN 930
            KKC+FC + + FLGFVVS++GV+VD+EK+KAI++WP+P  V EVRSFHGLA FYRRF+K+
Sbjct: 1463 KKCTFCTDNLVFLGFVVSADGVKVDQEKIKAIQEWPSPTTVGEVRSFHGLAGFYRRFVKD 1522

Query: 931  FSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVG 990
            FST+A+PL E++KK+V F W + QE AF  LKEKL+ +PLL LP+F  TFEIE DASG+G
Sbjct: 1523 FSTLAAPLTEIIKKDVGFKWGEVQEAAFQLLKEKLTQSPLLILPDFSKTFEIEWDASGIG 1582

Query: 991  IGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHES 1050
            IGAVLMQ++RP+ +FSEKL+GA+L Y TYDKELYALVRALQTWQHYLWPKEF+IHTDHES
Sbjct: 1583 IGAVLMQDKRPIAYFSEKLSGATLNYATYDKELYALVRALQTWQHYLWPKEFVIHTDHES 1642

Query: 1051 LKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLSFE 1110
            LK+L+ Q+KL++RHA+W+EFIETFPYVIKYKQGKENIVADALSRRYVLL TL+A+LL FE
Sbjct: 1643 LKYLKGQSKLSKRHARWVEFIETFPYVIKYKQGKENIVADALSRRYVLLTTLDAKLLGFE 1702

Query: 1111 HIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGG 1170
             IK++Y+ D  F    +SC K     +Y   DGFLF   +LC+P+CS+R+L VRE HGG 
Sbjct: 1703 QIKEMYESDPDFQEAYKSCAK-YASGHYFRHDGFLFYDNRLCVPNCSLRDLFVREFHGGS 1762

Query: 1171 LMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKSRLQPHGLYSPLPVPNGPW 1230
            LM H G++KT  +L +HF+WP M+ DV ++C RC  CK AKS++QPHGLY+PLP+P  PW
Sbjct: 1763 LMGHFGIAKTLKVLQDHFYWPHMKRDVGRICGRCTTCKLAKSKVQPHGLYTPLPIPTHPW 1822

Query: 1231 IDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGI 1290
             DISMDFV+GLPRTR G DSIFVVVDRFSKMAHFI C+KTDDA H+A+LFF+EVVRLHG+
Sbjct: 1823 NDISMDFVMGLPRTRTGKDSIFVVVDRFSKMAHFIACNKTDDALHVANLFFKEVVRLHGM 1882

Query: 1291 PKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKN 1350
            P++IVSDRD KFLS+FW+ LW KLGTKL++STTCHPQTDGQTEVVNRT+  +LRA I KN
Sbjct: 1883 PRTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLGTLLRAFIKKN 1942

Query: 1351 LKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVE 1410
            LK+WED LP  EFAYN  +HS +K + FEIVYGFNP++P+DL+P+P  E V+ D   K E
Sbjct: 1943 LKSWEDYLPHCEFAYNHAMHSASKFSTFEIVYGFNPISPLDLIPLPECERVSMDGKKKAE 2002

Query: 1411 FVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKLLPRG 1470
             V ++H+Q K  +E +  + A + NKGR+ +IF+ GD VWVH RKERFP +RKSKL+PR 
Sbjct: 2003 MVQQIHEQAKRNLEDKTKQYAKQANKGRREMIFEVGDQVWVHLRKERFPKERKSKLMPRI 2057

Query: 1471 DGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPFDV 1501
            +GPF+V +RINDNAYK+DL GKY +S +FNV DL PF +
Sbjct: 2063 NGPFEVTKRINDNAYKLDLQGKYDISDSFNVTDLIPFGI 2057

BLAST of CmoCh11G012290 vs. NCBI nr
Match: gi|91795223|gb|ABE60891.1| (putative polyprotein [Oryza sativa Japonica Group])

HSP 1 Score: 1656.7 bits (4289), Expect = 0.0e+00
Identity = 828/1527 (54.22%), Postives = 1075/1527 (70.40%), Query Frame = 1

Query: 76   GPGLMRGRDHGRRYHNLQQRVPYDDRIDRN--------------VGSIKLKLPKFYGKTD 135
            G G  RGR+HG       + V    R DR                G +K  +PKF G +D
Sbjct: 93   GRGADRGREHGLEESGTDEEVEQPHRDDRRHRGNRGRNQPNEERFGKLKFTMPKFEGGSD 152

Query: 136  PEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWV 195
            PE YL WE  V+ +F  HN+S+ KKV +   +F  YA IWW+++++ R    +  + SW 
Sbjct: 153  PEVYLTWELKVDKIFRLHNYSERKKVAMAALEFDGYALIWWEQMLNEREEAGQGDVRSWA 212

Query: 196  EFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLELDEDMEALMARF 255
            E K  MR RFVP++++RD+  KLQ LKQG  SV++YYKEM+  M R  + ED E  +ARF
Sbjct: 213  EMKREMRARFVPKHYRRDLFDKLQNLKQGSLSVDEYYKEMEKAMIRANVYEDEEQSIARF 272

Query: 256  LNGLNTEIADKTDLQPYSNIEELLHIAIKIERQIQR--RSQRYSSKTFPNSTSTWKKDSK 315
            ++GL+  I    + Q Y N+ EL+H A K ERQ+Q+  +S R  S +  N+ S  K  S+
Sbjct: 273  MSGLHRNIQRIVEFQQYRNLIELVHQASKAERQLQQDMKSNRGVSFSTKNAASGSKFTSR 332

Query: 316  NIDYK-------------HRNQEINEKPQAKFEKGESSRTGKEKVENNVRNRDLKCWRCQ 375
                +             +      +   A  E+  ++ T    V ++ ++  ++C++C 
Sbjct: 333  GSGNRGAFSSSSGGARSSNYGTSSGKDLAAPNERKNAANTSSTSVGSSTKSSGIQCFKCG 392

Query: 376  GVGHYSRDCPNARIMTIKE-GEIVTDDEAHDDINEETDESEEFSEEDPTHISLVTRRALN 435
            G GH +R+CPN R + + + GE  +  E   + +EE +  E+   E  +  +LV  + L+
Sbjct: 393  GRGHVARECPNNRTIVVNDQGEYESTSEEEQEDSEEENNLEKDICEFESGAALVVTQILS 452

Query: 436  THIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKL 495
              + +    QR NLFQTR  VQ     V+ID GSC N+ S  +V++L LK   HP PY +
Sbjct: 453  VQMSDAENGQRHNLFQTRAKVQDKVVKVIIDGGSCHNLASKEMVEKLGLKLLKHPHPYHV 512

Query: 496  QWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRVMYDGYANR 555
            QWLN+ G +++ Q+  V F IG+Y+D + CDV  M V  +LLGRPWQ+DR  ++ G  N+
Sbjct: 513  QWLNNSGSIKIAQRVKVPFKIGEYIDTMECDVAPMTVCHMLLGRPWQYDRSSLHCGRTNQ 572

Query: 556  YSFTHNGRKTTLIPLSPKDVFIDHC-KLEKKRQEADAKAEIEKESSEKKSLSEKQESNTQ 615
            Y+    G++  L P++P+ +  +H  K  + R E+  + +    S+  KS+SE  + N  
Sbjct: 573  YTIKWKGKELILKPMTPQQILAEHLQKSSEVRNESAKEGQKNNLSAPHKSVSESHKPNM- 632

Query: 616  PREKKERKAKSVSLYVRSSEARNVLLS-NQTILVLMCKGSCYFTNMLNPSLPSDFVVLLQ 675
             R+ K+R+ +++ +    SE R+V  +  Q + +L+CK +    N L  S+PS    +LQ
Sbjct: 633  -RDNKKREGENLVMIATKSEMRDVRRNPEQVLFILVCKDTLLSANDLT-SVPSVVARVLQ 692

Query: 676  EFEDLFSEEMPSSLPPLRGIEHKIDFIPGSPIPNRPAYRTNPKEAEEIQRQVSELLAKGY 735
            E+ED+F EE P  LPPLRGIEH+ID IPG+ +PNRPAYRTNP+E +EIQRQV  LL KGY
Sbjct: 693  EYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLDKGY 752

Query: 736  VRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELHGCSLFTK 795
            VRESLSPC+VPVILVPKKDGSWRMCVDCRAIN IT++YRHPIPRLDDMLDEL G  +F+K
Sbjct: 753  VRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIFSK 812

Query: 796  IDLKSGYHQIRMHIGDEWKTAFNTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKF 855
            IDL+SG+HQIRM IGDEWKTAF TK+GLYEWLVMPFGLTNAPSTFMRLMNHVLR ++GKF
Sbjct: 813  IDLRSGFHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKF 872

Query: 856  VVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGV 915
            VVVYFDDIL+YSK+L++H+ H++ VL  LR E LY NL+KC+FC ++V FLGFVVS  G+
Sbjct: 873  VVVYFDDILIYSKTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGI 932

Query: 916  EVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKNVSFIWEK 975
            +VDE KVKAIKDWPTP+NVS+V+SF GLA FYRRF++ FSTIA+PLNEL KK V+F W +
Sbjct: 933  QVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGE 992

Query: 976  DQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFFSEKLTGA 1035
             QE AF  LK++LS  PLL LP+F  TFE+ECDASG+GIG VLMQN +P+ +FSEKL GA
Sbjct: 993  PQEKAFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGGA 1052

Query: 1036 SLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHAKWLEFIE 1095
             L Y  YDKELYALVRAL+TWQHYLWPKEF+IH+DHE+LK+L+ Q KLNRRHAKW+EFIE
Sbjct: 1053 QLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIE 1112

Query: 1096 TFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLSFEHIKDLYQHDMFFAPFVESCEKG 1155
            TFPYV+KYK+GKENIVADALSR+ VLLN L  ++   E IK+LY  D+ F+     C  G
Sbjct: 1113 TFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSEPYAKCTAG 1172

Query: 1156 LIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLSEHFFWPK 1215
               + Y + DGFLFR  KLC+P CS+R LL++E H GGLM H G  KTYDML++HF+WPK
Sbjct: 1173 KGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPK 1232

Query: 1216 MRHDVHKVCARCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTRKGYDSIF 1275
            MR DV ++  RC+ C +AKS+L PHGLY+PLPVP+ PW DISMDFVLGLPRT++G DSIF
Sbjct: 1233 MRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIF 1292

Query: 1276 VVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSHFWRVLWG 1335
            VVVDRFSKMAHFIPCHK+DDA HIA LFF E+VRLHG+PK+IVSDRD KFLS+FW+ LW 
Sbjct: 1293 VVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWA 1352

Query: 1336 KLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAYNRVVHST 1395
            KLGT+L++STTCHPQTDGQTEVVNRT++ +LRA+I KNLK WE+CLP +EFAYNR VHST
Sbjct: 1353 KLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHST 1412

Query: 1396 TKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEKQNSKVAT 1455
            T   PFE+VYGF PL+PIDLLP+P +E  + +A+ +  +V K+H++ KE IEK++   A 
Sbjct: 1413 TNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAA 1472

Query: 1456 RINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAYKIDLPGK 1515
              NK RK V F+PGD VWVH RK+RFP +RKSKL+PRGDGPF+VL +INDNAYKI+LP  
Sbjct: 1473 WANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPED 1532

Query: 1516 YGVSATFNVVDLSP-FDVGDGLDSRTNPSQEGEND-----MNHDQGISIP--------QG 1557
            YGVS+TFNV DL+P F + D   SR+ P QEGE+D     ++       P        QG
Sbjct: 1533 YGVSSTFNVADLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSSTKQPSSNTKDTIQG 1592

BLAST of CmoCh11G012290 vs. NCBI nr
Match: gi|56744299|gb|AAW28578.1| (Putative gag-pol polyprotein, identical [Solanum demissum])

HSP 1 Score: 1645.2 bits (4259), Expect = 0.0e+00
Identity = 825/1519 (54.31%), Postives = 1071/1519 (70.51%), Query Frame = 1

Query: 103  DRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWW 162
            D N+ SIK+K+  F G  DP+ YL WE+ VE++F+CHN+S+ KKV L + +F  YA  WW
Sbjct: 111  DDNINSIKMKMSSFKGTRDPDLYLDWERRVEAIFDCHNYSEGKKVKLAVVEFSDYAASWW 170

Query: 163  DKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMD 222
             KL   R +    PI +W E K  MRKRF+P YFQRD+  +LQ LKQG  SV++Y+K MD
Sbjct: 171  KKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDLQSRLQRLKQGSMSVDEYFKSMD 230

Query: 223  TLMDRLELDEDMEALMARFLNGLNTEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRY 282
              M +    E+ EA +ARFLNGLNTEIA+  ++Q Y  ++EL+ +++K+E+QI+++ Q  
Sbjct: 231  MAMIQANCMEEEEATIARFLNGLNTEIANVVEIQQYVTLDELVDLSVKVEKQIEKKQQNN 290

Query: 283  SSKTFPNSTSTWKKDSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVENNVRNRDLKC 342
            S ++ PN+ S  KK     + K  ++  +++ + K EKG  +   K    ++     ++C
Sbjct: 291  SWRSRPNTIS--KKPWSTQEGKAPSKPQDDRGKGKVEKGGKTFNPKSSKPSS----SIQC 350

Query: 343  WRCQGVGHYSRDCPNARIMTIKEGEIVTDDEAHDDINEETDESEEFSEEDPTHISL---- 402
             +C G GH   +CP+ R + ++E      +++      E +E E  SEED   +      
Sbjct: 351  HKCHGRGHMMHECPSRRNILLRENGEYESEKSE----REEEEGEGVSEEDDLELPNDGII 410

Query: 403  -VTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQ 462
             V RR +  ++      QRENLF TRC ++    S++ID GSC NVVSS LV +L +   
Sbjct: 411  GVVRRIMTINLGSVDEGQRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIACM 470

Query: 463  PHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRV 522
                PY+LQWLNDCGEV+V +Q ++SF +G+Y D++LCDVV M    +LLGRPWQ+DR  
Sbjct: 471  KRSTPYRLQWLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDT 530

Query: 523  MYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKK--RQEADAKAEIE-----KESS 582
             + G  NRYS  HNG+K TL PLSP  VF D  +L +   +Q+ + K+E+E     +E  
Sbjct: 531  THHGRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEIE 590

Query: 583  EKKSLSEKQ-ESNTQPREKKE---------------RKAKSVSLYVRSSEARNVLLSNQT 642
            +KK   EK+ E +   +E KE               ++ K+ SLY+++ E  N       
Sbjct: 591  KKKDGREKEREGSDLSKEVKEGVSKKIKCFGERKEAKEKKNESLYIKAKECLNARREGLP 650

Query: 643  ILVLMCKGSCYFTNMLNPSLPSDFVVLLQEFEDLFSEEMPSSLPPLRGIEHKIDFIPGSP 702
            I++L  K        L PSLP+    LLQ FED+F ++ P  LPPLRGIEH+IDF+PGS 
Sbjct: 651  IILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGSQ 710

Query: 703  IPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAI 762
            +PNRPAYR+NP+E +E+QRQV ELL KG+VRES+SPCSVPV+LVPKKDG+WRMCVDCRAI
Sbjct: 711  LPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRAI 770

Query: 763  NKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEW 822
            NKIT+KYRHPIPRLDDMLD+L G  +F+KIDLKSGYHQIR++ GDEWKTAF TKYGLYEW
Sbjct: 771  NKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEW 830

Query: 823  LVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRN 882
            LVMPFGLTNAPSTFMRLMNHV +++ GKF+VVYFDDIL++S++LD+H+ H++ V   LRN
Sbjct: 831  LVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRN 890

Query: 883  ECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASF 942
            + L+ NLKKC+FC+++V FLGFVVSS GVEVD+EK+KAIK+WP P +V+EVRSFHGLASF
Sbjct: 891  QRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASF 950

Query: 943  YRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIE 1002
            YRRF+++FSTIA+PL E++KK+  F W K+Q+ AFN LK+KL SAPLL LP+F  +FE+E
Sbjct: 951  YRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEVE 1010

Query: 1003 CDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFI 1062
            CDASG GIGAVLMQ+ +P+ +FSEKL+GA+L Y T DKELYAL                 
Sbjct: 1011 CDASGKGIGAVLMQDSKPIAYFSEKLSGATLNYSTNDKELYAL----------------- 1070

Query: 1063 IHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLN 1122
                         Q KL+RRHAKW+EFIETFPYVI YKQGKEN+VADALSRRYVL++TL 
Sbjct: 1071 ------------SQGKLSRRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTLT 1130

Query: 1123 ARLLSFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLV 1182
            ++LL F+ IK LY +D  F      C+ G   + + L D FLF++ KLC+P+CS+REL V
Sbjct: 1131 SKLLGFDQIKFLYANDSDFGEIFAECKLGPF-EKFNLQDEFLFKENKLCVPNCSLRELFV 1190

Query: 1183 REAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKSRLQPHGLYSPL 1242
            REAH GGLM H GV KT ++LSEHF+WP MR DV KVC+ C+ CKQAKSR  PHGLY+PL
Sbjct: 1191 REAHCGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTPL 1250

Query: 1243 PVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFRE 1302
            PV N PWIDISMDF+LGLPRT+ G DSIFVVVDRFSKMA FIPC KT+DA H+ADLF +E
Sbjct: 1251 PVSNSPWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADLFVKE 1310

Query: 1303 VVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAML 1362
            VV+LHGIP++IVSDRD KFLSHFWR+LWGKLGTKL++ST+CHPQTDGQTEVVNRT+  ML
Sbjct: 1311 VVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNML 1370

Query: 1363 RAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNF 1422
            RAI+   L +WED LP +EFAYNR  HS+T  TPFE+VYGFNPLTP+DLLP+P+ +F N 
Sbjct: 1371 RAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANL 1430

Query: 1423 DANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRK 1482
            D   K + + K+H+Q +  IEK+N +VA R NKGRK VIFKPGD VWVH RKERFP++RK
Sbjct: 1431 DGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRK 1490

Query: 1483 SKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPFDVGDGLDSRTNPSQEG 1542
            +KL PRG GP++VLERI DNAYK+DLPG++ VSATFNV DLS +D    LDSRTN  QE 
Sbjct: 1491 TKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHYDA--DLDSRTNSLQEE 1550

Query: 1543 END---------MNHDQGISIPQGPITRTRAKKLQQT---LYSYIQAMVSSSKEILEDAG 1578
             ND          + D  +  P+ PITR++ K+       L S IQ  +   +E+     
Sbjct: 1551 GNDSIQGSSTPLKDKDDALETPRRPITRSQTKEFNDKLNGLQSLIQRFLIGEEELKPKGE 1587

BLAST of CmoCh11G012290 vs. NCBI nr
Match: gi|56744298|gb|AAW28577.1| (Putative gag-pol polyprotein, identical [Solanum demissum])

HSP 1 Score: 1644.0 bits (4256), Expect = 0.0e+00
Identity = 825/1519 (54.31%), Postives = 1071/1519 (70.51%), Query Frame = 1

Query: 103  DRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWW 162
            D N+ SIK+K+  F G  DP+ YL WE+ VE++F+CHN+S+ KKV L + +F  YA  WW
Sbjct: 111  DDNINSIKMKMSSFKGTRDPDLYLDWERRVEAIFDCHNYSEGKKVKLAVVEFSDYAASWW 170

Query: 163  DKLMSSRRRNLEAPIDSWVEFKESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMD 222
             KL   R +    PI +W E K  MRKRF+P YFQRD+  +LQ LKQG  SV++Y+K MD
Sbjct: 171  KKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDLQSRLQRLKQGSMSVDEYFKSMD 230

Query: 223  TLMDRLELDEDMEALMARFLNGLNTEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRY 282
              M +    E+ EA +ARFLNGLNTEIA+  ++Q Y  ++EL+ +++K+E+QI+++ Q  
Sbjct: 231  MAMIQANCMEEEEATIARFLNGLNTEIANVVEIQQYVTLDELVDLSVKVEKQIEKKQQNN 290

Query: 283  SSKTFPNSTSTWKKDSKNIDYKHRNQEINEKPQAKFEKGESSRTGKEKVENNVRNRDLKC 342
            S ++ PN+ S  KK     + K  ++  +++ + K EKG  +   K    ++     ++C
Sbjct: 291  SWRSRPNTIS--KKPWSTQEGKAPSKPQDDRGKGKVEKGGKTFNPKSSKPSS----SIQC 350

Query: 343  WRCQGVGHYSRDCPNARIMTIKEGEIVTDDEAHDDINEETDESEEFSEEDPTHISL---- 402
             +C G GH   +CP+ R + ++E      +++      E +E E  SEED   +      
Sbjct: 351  HKCHGRGHMMHECPSRRNILLRENGEYESEKSE----REEEEGEGVSEEDDLELPNDGII 410

Query: 403  -VTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQ 462
             V RR +  ++      QRENLF TRC ++    S++ID GSC NVVSS LV +L +   
Sbjct: 411  GVVRRIMTINLGSVDEGQRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKLGIACM 470

Query: 463  PHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRRV 522
                PY+LQWLNDCGEV+V +Q ++SF +G+Y D++LCDVV M    +LLGRPWQ+DR  
Sbjct: 471  KRSTPYRLQWLNDCGEVQVNKQCMISFNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDT 530

Query: 523  MYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKK--RQEADAKAEIE-----KESS 582
             + G  NRYS  HNG+K TL PLSP  VF D  +L +   +Q+ + K+E+E     +E  
Sbjct: 531  THHGRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEIE 590

Query: 583  EKKSLSEKQ-ESNTQPREKKE---------------RKAKSVSLYVRSSEARNVLLSNQT 642
            +KK   EK+ E +   +E KE               ++ K+ SLY+++ E  N       
Sbjct: 591  KKKDGREKEREGSDLSKEVKEGVSKKIKCFGERKEAKEKKNESLYIKAKECLNARREGLP 650

Query: 643  ILVLMCKGSCYFTNMLNPSLPSDFVVLLQEFEDLFSEEMPSSLPPLRGIEHKIDFIPGSP 702
            I++L  K        L PSLP+    LLQ FED+F ++ P  LPPLRGIEH+IDF+PGS 
Sbjct: 651  IILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGSQ 710

Query: 703  IPNRPAYRTNPKEAEEIQRQVSELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAI 762
            +PNRPAYR+NP+E +E+QRQV ELL KG+VRES+SPCSVPV+LVPKKDG+WRMCVDCRAI
Sbjct: 711  LPNRPAYRSNPEETKELQRQVEELLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRAI 770

Query: 763  NKITIKYRHPIPRLDDMLDELHGCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEW 822
            NKIT+KYRHPIPRLDDMLD+L G  +F+KIDLKSGYHQIR++ GDEWKTAF TKYGLYEW
Sbjct: 771  NKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEW 830

Query: 823  LVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRN 882
            LVMPFGLTNAPSTFMRLMNHV +++ GKF+VVYFDDIL++S++LD+H+ H++ V   LRN
Sbjct: 831  LVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRN 890

Query: 883  ECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASF 942
            + L+ NLKKC+FC+++V FLGFVVSS GVEVD+EK+KAIK+WP P +V+EVRSFHGLASF
Sbjct: 891  QRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASF 950

Query: 943  YRRFIKNFSTIASPLNELVKKNVSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIE 1002
            YRRF+++FSTIA+PL E++KK+  F W K+Q+ AFN LK+KL SAPLL LP+F  +FE+E
Sbjct: 951  YRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEVE 1010

Query: 1003 CDASGVGIGAVLMQNQRPLMFFSEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFI 1062
            CDASG GIGAVLMQ+ +P+ +FSEKL+GA+L Y T DKELYAL                 
Sbjct: 1011 CDASGKGIGAVLMQDSKPIAYFSEKLSGATLNYSTNDKELYAL----------------- 1070

Query: 1063 IHTDHESLKHLRVQNKLNRRHAKWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLN 1122
                         Q KL+RRHAKW+EFIETFPYVI YKQGKEN+VADALSRRYVL++TL 
Sbjct: 1071 ------------SQGKLSRRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTLT 1130

Query: 1123 ARLLSFEHIKDLYQHDMFFAPFVESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLV 1182
            ++LL F+ IK LY +D  F      C+ G   + + L D FLF++ KLC+P+CS+REL V
Sbjct: 1131 SKLLGFDQIKFLYANDSDFGEIFAECKLGPF-EKFNLQDEFLFKENKLCVPNCSLRELFV 1190

Query: 1183 REAHGGGLMAHHGVSKTYDMLSEHFFWPKMRHDVHKVCARCIACKQAKSRLQPHGLYSPL 1242
            REAH GGLM H GV KT ++LSEHF+WP MR DV KVC+ C+ CKQAKSR  PHGLY+PL
Sbjct: 1191 REAHCGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTPL 1250

Query: 1243 PVPNGPWIDISMDFVLGLPRTRKGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFRE 1302
            PV N PWIDISMDF+LGLPRT+ G DSIFVVVDRFSKMA FIPC KT+DA H+ADLF +E
Sbjct: 1251 PVSNFPWIDISMDFILGLPRTKYGKDSIFVVVDRFSKMARFIPCKKTNDASHVADLFVKE 1310

Query: 1303 VVRLHGIPKSIVSDRDVKFLSHFWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAML 1362
            VV+LHGIP++IVSDRD KFLSHFWR+LWGKLGTKL++ST+CHPQTDGQTEVVNRT+  ML
Sbjct: 1311 VVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNML 1370

Query: 1363 RAIIDKNLKTWEDCLPFIEFAYNRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNF 1422
            RAI+   L +WED LP +EFAYNR  HS+T  TPFE+VYGFNPLTP+DLLP+P+ +F N 
Sbjct: 1371 RAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANL 1430

Query: 1423 DANAKVEFVHKLHKQVKEQIEKQNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRK 1482
            D   K + + K+H+Q +  IEK+N +VA R NKGRK VIFKPGD VWVH RKERFP++RK
Sbjct: 1431 DGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRK 1490

Query: 1483 SKLLPRGDGPFQVLERINDNAYKIDLPGKYGVSATFNVVDLSPFDVGDGLDSRTNPSQEG 1542
            +KL PRG GP++VLERI DNAYK+DLPG++ VSATFNV DLS +D    LDSRTN  QE 
Sbjct: 1491 TKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHYDA--DLDSRTNSLQEE 1550

Query: 1543 END---------MNHDQGISIPQGPITRTRAKKLQQT---LYSYIQAMVSSSKEILEDAG 1578
             ND          + D  +  P+ PITR++ K+       L S IQ  +   +E+     
Sbjct: 1551 GNDSIQGSSTPLKDKDDALETPRRPITRSQTKEFNDKLNGLQSLIQRFLIGEEELKPKGE 1587

BLAST of CmoCh11G012290 vs. NCBI nr
Match: gi|22296822|gb|AAM94350.1| (gag-pol polyprotein [Zea mays])

HSP 1 Score: 1626.3 bits (4210), Expect = 0.0e+00
Identity = 815/1524 (53.48%), Postives = 1045/1524 (68.57%), Query Frame = 1

Query: 65   SDHHEDNPHAVGPGLMRGRDHGRRYHNLQQRVPYDDRIDRNVGSIKLKLPKFYGKTDPEE 124
            +D  +D+  A  P   R R + R      +R  + +  D     +K K+P F GK DP+ 
Sbjct: 107  ADTEQDDQEA--PNRRRLRTNRRGMGGFHRREVHGN--DDAFSKVKFKIPPFDGKYDPDA 166

Query: 125  YLQWEKTVESVFNCHNFSDEKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWVEFK 184
            Y+ WE  V+  F CH F +  +V    ++F ++A +WW   +   ++N      +W   K
Sbjct: 167  YITWEIAVDQKFACHEFPENARVRAATSEFTEFASVWW---IEHGKKNPNNMPQTWDALK 226

Query: 185  ESMRKRFVPQYFQRDMAQKLQALKQGRKSVEDYYKEMDTLMDRLELDEDMEALMARFLNG 244
              MR RFVP Y+ RDM  KLQ L+QG KSVE+YY+E+   M R  ++E  E+ MARFL G
Sbjct: 227  RVMRARFVPSYYARDMLNKLQQLRQGTKSVEEYYQELQMGMLRCNIEEGEESAMARFLGG 286

Query: 245  LNTEIADKTDLQPYSNIEELLHIAIKIERQIQRRSQRYSSKTFPNSTSTWKK-------- 304
            LN EI D    + Y+N+  L H+A K ER++Q R     S      ++ W++        
Sbjct: 287  LNREIQDILAYKDYANVTRLFHLACKAEREVQGRRASARSNVSAGKSTPWQQRTTTSMTG 346

Query: 305  ----DSKNIDYKHRNQEINEKPQAKFEKGESSRTGK-----EKVENNVRNRDLKCWRCQG 364
                 + +          ++KP+A      +    K       V +  R RD+ C+RC+G
Sbjct: 347  RTLAPTPSPSRPAPPPSSSDKPRASSTNSATKSAQKPAGSASSVASTGRTRDVLCYRCKG 406

Query: 365  VGHYSRDCPNARIMTIKEGEIVTD----DEAH------DDINEETDESEEFSEEDPTHI- 424
             GH  RDCPN R++ +K+    +     DEA       DD   +    E+   +D  H  
Sbjct: 407  YGHVQRDCPNQRVLVVKDDGGYSSASDLDEATLALLAADDAGTKEPPEEQIGADDAEHYE 466

Query: 425  SLVTRRALNTHIKEDGLDQRENLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKT 484
            SL+ +R L+  +++   +QR  LFQT+C+++   C ++ID GSC N+ SS +V++L L T
Sbjct: 467  SLIVQRVLSAQMEKAEQNQRHTLFQTKCVIKERSCRLIIDGGSCNNLASSDMVEKLALTT 526

Query: 485  QPHPRPYKLQWLNDCGEVRVTQQTLVSFTIGKYVDDVLCDVVSMHVGDLLLGRPWQFDRR 544
            +PHP PY +QWLN+ G+V+VT+   ++F IG Y D V CDVV M   ++LLGRPWQFD  
Sbjct: 527  KPHPHPYHIQWLNNSGKVKVTKLVRINFAIGSYRDVVDCDVVPMDACNILLGRPWQFDSD 586

Query: 545  VMYDGYANRYSFTHNGRKTTLIPLSPKDVFIDHCKLEKKRQEADAKAEIEKESSEKKSLS 604
             M+ G +N+YS  H+ +K  L+P+SP+ +  D            AKA   K  + K    
Sbjct: 587  CMHHGRSNQYSLIHHDKKIILLPMSPEAIVRDDV----------AKATKAKTENNK---- 646

Query: 605  EKQESNTQPREKKERKAKSVSLYVRSSEARNVLLSNQTILVLMCKGSCYFTNMLNPSLPS 664
                       K   K K   L    ++   +  S      L+CK +      +  SLP 
Sbjct: 647  ---NIKVVGNNKDGIKLKGHCLLATKTDVNELFASTTVAYALVCKDALISIQDMQHSLPP 706

Query: 665  DFVVLLQEFEDLFSEEMPSSLPPLRGIEHKIDFIPGSPIPNRPAYRTNPKEAEEIQRQVS 724
                +LQE+ D+F  E+P  LPP+RGIEH+ID IPG+ +PNR  YRTNP+E +EIQRQV 
Sbjct: 707  VITNILQEYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQ 766

Query: 725  ELLAKGYVRESLSPCSVPVILVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELH 784
            ELL KGYVRESLSPC+VPVILVPKKDG+WRMCVDCRAIN ITI+YRHPIPRLDDMLDEL 
Sbjct: 767  ELLDKGYVRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELS 826

Query: 785  GCSLFTKIDLKSGYHQIRMHIGDEWKTAFNTKYGLYEWLVMPFGLTNAPSTFMRLMNHVL 844
            G  +F+K+DL+SGYHQIRM +GDEWKTAF TK+GLYEWLVMPFGLTNAPSTFMRLMN VL
Sbjct: 827  GAIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVL 886

Query: 845  REYLGKFVVVYFDDILVYSKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGF 904
            R ++GKFVVVYFDDIL+YSKS+D+H+ H+R V   LR+  L+ NL+KC+FC ++V+FLG+
Sbjct: 887  RAFIGKFVVVYFDDILIYSKSMDEHVDHMRAVFNALRDARLFGNLEKCTFCTDRVSFLGY 946

Query: 905  VVSSNGVEVDEEKVKAIKDWPTPKNVSEVRSFHGLASFYRRFIKNFSTIASPLNELVKKN 964
            VV+  G+EVD+ KV+AI  WP PK +++VRSF GLA FYRRF+K+FSTIA+PLNEL KK 
Sbjct: 947  VVTPQGIEVDQAKVEAIHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKG 1006

Query: 965  VSFIWEKDQELAFNTLKEKLSSAPLLALPNFESTFEIECDASGVGIGAVLMQNQRPLMFF 1024
            V F W K QE AFN LK+KL+ APLL LP+F  TFE+ECDASG+G+G VL+Q  +P+ +F
Sbjct: 1007 VHFSWGKVQEHAFNVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYF 1066

Query: 1025 SEKLTGASLRYPTYDKELYALVRALQTWQHYLWPKEFIIHTDHESLKHLRVQNKLNRRHA 1084
            SEKL+G+ L Y TYDKELYALVR L+TWQHYLWPKEF+IH+DHESLKH+R Q KLNRRHA
Sbjct: 1067 SEKLSGSVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHA 1126

Query: 1085 KWLEFIETFPYVIKYKQGKENIVADALSRRYVLLNTLNARLLSFEHIKDLYQHDMFFAPF 1144
            KW+EFIE+FPYVIK+K+GKENI+ADALSRRY LLN L+ ++   E IKD Y HD  F   
Sbjct: 1127 KWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIKDQYVHDADFKDV 1186

Query: 1145 VESCEKGLIVDNYLLLDGFLFRKGKLCIPSCSIRELLVREAHGGGLMAHHGVSKTYDMLS 1204
            +  C+ G   + Y++ DGF+FR  KLCIP+ S+R LL++EAHGGGLM H G  KT D+L+
Sbjct: 1187 LLHCKDGKGWNKYIVSDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDILA 1246

Query: 1205 EHFFWPKMRHDVHKVCARCIACKQAKSRLQPHGLYSPLPVPNGPWIDISMDFVLGLPRTR 1264
             HFFWPKMR DV ++ ARC  C++AKSRL PHGLY PLPVP+ PW DISMDFVLGLPRTR
Sbjct: 1247 GHFFWPKMRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTR 1306

Query: 1265 KGYDSIFVVVDRFSKMAHFIPCHKTDDAKHIADLFFREVVRLHGIPKSIVSDRDVKFLSH 1324
            KG DS+FVVVDRFSKMAHFIPCHKTDDA HIADLFFRE+VRLHG+P +IVSDRD KFLSH
Sbjct: 1307 KGRDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSH 1366

Query: 1325 FWRVLWGKLGTKLVYSTTCHPQTDGQTEVVNRTMTAMLRAIIDKNLKTWEDCLPFIEFAY 1384
            FWR LW KLGTKL++STTCHPQTDGQTEVVNRT++ MLRA++ KN+K WEDCLP IEFAY
Sbjct: 1367 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAY 1426

Query: 1385 NRVVHSTTKCTPFEIVYGFNPLTPIDLLPIPSKEFVNFDANAKVEFVHKLHKQVKEQIEK 1444
            NR +HSTTK  PF+IVYG  P  PIDL+P+PS E +NFDA  + E + KLH+  KE IE+
Sbjct: 1427 NRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIER 1486

Query: 1445 QNSKVATRINKGRKIVIFKPGDWVWVHFRKERFPTQRKSKLLPRGDGPFQVLERINDNAY 1504
             N++     +KGRK + F+PGD VW+H RKERFP  RKSKLLPR DGPF+VLE+INDNAY
Sbjct: 1487 MNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAY 1546

Query: 1505 KIDLPGKYGVSATFNVVDLSPFDVGD--GLDSRTNPSQEGENDMN-HDQGISIP-----Q 1553
            ++DLP  +GVS TFN+ DL P+ +G+   L+SRT   QEGEND + H    SIP      
Sbjct: 1547 RLDLPADFGVSPTFNIADLKPY-LGEEVELESRTTQMQEGENDEDIHTTDASIPIQVPIS 1605