CmoCh11G012020 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G012020
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Descriptioncopper ion binding;electron carriers
LocationCmo_Chr11 : 7081768 .. 7083251 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAAAGAGGAAGAAATGGAGGAAATGAGAGTGAGGGTGATAATGGTAATAGTGGCAATGGCTTGGGCAACACTTGCAATGGGAGAGAAGCTTCATAAGGTGGGCAATTCTAAAGGATGGAACCCTAATCTCAATTATACCCTTTGGTCCTCCTCTCACCGTTTCTATCTCGGTGATTGGCTTTGTAAGTTTCTTTATCTCTTTCGTATTTTTTCCTTCTTTCTTATTTTGAAAATCGGGTCGAGTCGAGTCGAGTCGAATCCGGCAAATTTGTGAGCTTTTTCGAACAGTTTCAATTAGTTTTGGTTCTTCAGCTTCGTACTGCCAATTTAGCCCTAAATTTTTCATATTTATAATAATTTAAGGGTCGTGATTCTTGTATATCATTATTTTTTTCATGAATATCCAATGTTTTTTTCTTTTATTTTTTTTAATTTTAAGAAAATATTGATATTATTCACAAATAAAAAAAAATATATAGCCCGAAATTAAAGATTAAAAATGGATGAATTTATTTTTTTAAATTATTATTATTATTAGGAAGTGAATTTAGGAAATAAAGTTTTGTTAGTGACCAATGATGCTAAATTAAAAAATATATATTTTGTTTTTTTCTTTTTATAAATATTTTTGAGTTTGATTAATTTGGTAGAAAAGTATTAAGTGAAATTTAAAAAATTTAAGATATTTTTTAAATATTTTAAAGTTTTAAGGGTGTTTTTTAAAATTTGTAGGACGAAATAATTAATTGTTAAAATCGTATATTAATATTTTGTTTGAAAAGATTTCGTGTTCGACAAGCGATACTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGAGTTGCAACGAGAAGGAGTTCATAAAGAACATTACAAGAGGTGGACGAGACGTGTTTCAGCTGACGGAGCTGCGGCCCTATTTCTTCATTGCCGGCGGCGGCTACTGCTTTCAAGGAATGAAACTTGCTGTCTTAGTGTGCCCGACGGCCGTAGCCCCGGCTGCTCCGCCGTCTGCCACTCCCATAAGTGGCGCGTCTTTGTCAAACCCCACCTGTTGGATTATGAATGCCCTTATGCTTTTTGTTGCTCTTTTCTTAGTGATTAAGATTGAGTGAATGAAGGAAGAGAGATTTATTTCGGTGTGTTTGAGATATTCTCGAAGTAGTTCGGGATGTAATTTGATCTACTTTGATGGTCATATCAAATTACTCGAGTGGAACTTGTAATAGAAATTATGCGACATATACTCTTGTTCTTGAGTAAGTCGACTAGCTAAACTTTGATTGTCGTTGACACATATGCTCATTCAAGTTAGGATATAAACCTCGTAGATTGTCATGTCTCGTTCACTTTGGATGAGCACAGGGGCTCGTCCTGTTCTTTATATATATGAATATTAAATAGTACCCGTAAGGACCGTACAACATACTATCTCATTTTTTATTTATTTTTTTTCACTTTTTATTTTGTTTATTTATT

mRNA sequence

AAAGAAAGAGGAAGAAATGGAGGAAATGAGAGTGAGGGTGATAATGGTAATAGTGGCAATGGCTTGGGCAACACTTGCAATGGGAGAGAAGCTTCATAAGGTGGGCAATTCTAAAGGATGGAACCCTAATCTCAATTATACCCTTTGGTCCTCCTCTCACCGTTTCTATCTCGGTGATTGGCTTTATTTCGTGTTCGACAAGCGATACTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGAGTTGCAACGAGAAGGAGTTCATAAAGAACATTACAAGAGGTGGACGAGACGTGTTTCAGCTGACGGAGCTGCGGCCCTATTTCTTCATTGCCGGCGGCGGCTACTGCTTTCAAGGAATGAAACTTGCTGTCTTAGTGTGCCCGACGGCCGTAGCCCCGGCTGCTCCGCCGTCTGCCACTCCCATAAGTGGCGCGTCTTTGTCAAACCCCACCTGTTGGATTATGAATGCCCTTATGCTTTTTGTTGCTCTTTTCTTAGTGATTAAGATTGAGTGAATGAAGGAAGAGAGATTTATTTCGGTGTGTTTGAGATATTCTCGAAGTAGTTCGGGATGTAATTTGATCTACTTTGATGGTCATATCAAATTACTCGAGTGGAACTTGTAATAGAAATTATGCGACATATACTCTTGTTCTTGAGTAAGTCGACTAGCTAAACTTTGATTGTCGTTGACACATATGCTCATTCAAGTTAGGATATAAACCTCGTAGATTGTCATGTCTCGTTCACTTTGGATGAGCACAGGGGCTCGTCCTGTTCTTTATATATATGAATATTAAATAGTACCCGTAAGGACCGTACAACATACTATCTCATTTTTTATTTATTTTTTTTCACTTTTTATTTTGTTTATTTATT

Coding sequence (CDS)

ATGGAGGAAATGAGAGTGAGGGTGATAATGGTAATAGTGGCAATGGCTTGGGCAACACTTGCAATGGGAGAGAAGCTTCATAAGGTGGGCAATTCTAAAGGATGGAACCCTAATCTCAATTATACCCTTTGGTCCTCCTCTCACCGTTTCTATCTCGGTGATTGGCTTTATTTCGTGTTCGACAAGCGATACTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGAGTTGCAACGAGAAGGAGTTCATAAAGAACATTACAAGAGGTGGACGAGACGTGTTTCAGCTGACGGAGCTGCGGCCCTATTTCTTCATTGCCGGCGGCGGCTACTGCTTTCAAGGAATGAAACTTGCTGTCTTAGTGTGCCCGACGGCCGTAGCCCCGGCTGCTCCGCCGTCTGCCACTCCCATAAGTGGCGCGTCTTTGTCAAACCCCACCTGTTGGATTATGAATGCCCTTATGCTTTTTGTTGCTCTTTTCTTAGTGATTAAGATTGAGTGA
Homology
[Close]
BLAST of CmoCh11G012020 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-25
Identity = 63/141 (44.68%), Postives = 85/141 (60.28%), Query Frame = 1 

Query: 1   MEEMRVRVIMVIVAMAWATLAMG--EKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYF 60
           M    V +  V++A   A    G   K + VG +K WNPN+NYT+W+    FYLGDWLYF
Sbjct: 1   MARFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYF 60

Query: 61  VFDKRYYNVLEVNKTSYESCNEKEFIKNITRG-GRDVFQLTELRPYFFIAGGGYCFQGMK 120
           VFD+  +N+LEVNKT YE C     I+N TRG GRD+  L + + Y+ + G G C+ GMK
Sbjct: 61  VFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMK 120

Query: 121 LAVLVCPTAVAPAAPPSATPI 139
           L+V V    + P  PP + P+
Sbjct: 121 LSVKV--EKLPP--PPKSAPV 137

[Close]
BLAST of CmoCh11G012020 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.8e-12
Identity = 50/119 (42.02%), Postives = 66/119 (55.46%), Query Frame = 1 

Query: 29  VGNSKGW--NPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNKTSYESCNEKEFIKN 88
           VG S  W  NP  NY  WS  +RF + D LYF + K   +VLEVNK  Y++CN K  IK 
Sbjct: 33  VGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKR 92

Query: 89  ITRGGRDVFQLTELRPYFFIAGG-GYCFQGMKLAVLVC-----PTAVAP--AAPPSATP 138
           +  G  ++  L    P++FI+G    C +G KL V+V       TA +P  AAP S+TP
Sbjct: 93  VDDGDSEI-SLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAAPGSSTP 150

[Close]
BLAST of CmoCh11G012020 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 35/102 (34.31%), Postives = 61/102 (59.80%), Query Frame = 1 

Query: 26  LHKVGNSKGWNPNL--NYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNKTSYESCNEKEF 85
           +HKVG+S GW   +  +Y  W+SS++F++GD L F ++ +++NVL+V++  ++SCN    
Sbjct: 3   VHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSP 62

Query: 86  IKNITRGGRDVFQLTELRPYFFIAG-GGYCFQGMKLAVLVCP 125
             + T  G D   L     ++F+ G  G+C  G K+ + V P
Sbjct: 63  AASYT-SGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 103

[Close]
BLAST of CmoCh11G012020 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 41/117 (35.04%), Postives = 62/117 (52.99%), Query Frame = 1 

Query: 28  KVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNKTSYESCNEKEFIKNI 87
           KVG+  GW  NL+YT+W +   F +GD L FV+   + +V  V+K  Y++C+     +N 
Sbjct: 25  KVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSH-SVSVVDKAGYDNCDSSGATQNF 84

Query: 88  TRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLVCPTAVAPAAP--PSATPISGAS 143
             G   +   T    +F     G+C  GMKLAV V   A +P+ P  P +TP + +S
Sbjct: 85  ADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAPSPSTPSSPPSTPSTPSS 140

[Close]
BLAST of CmoCh11G012020 vs. Swiss-Prot
Match: STEL_TOXVR (Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-06
Identity = 30/102 (29.41%), Postives = 56/102 (54.90%), Query Frame = 1 

Query: 26  LHKVGNSKGWNP----NLNYTL-WSSSHRFYLGDWLYFVFDKRYYNVLEVNKTSYESCNE 85
           ++ VG+S GW      +++Y   W+S+  F++GD L F +D+R++NV +V + +Y+SCN+
Sbjct: 2   VYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCND 61

Query: 86  KEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLV 123
              I +   G   +   T  + Y+      +C  G K+ + V
Sbjct: 62  TTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103

[Close]
BLAST of CmoCh11G012020 vs. TrEMBL
Match: A0A0A0LF66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824210 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.7e-52
Identity = 112/168 (66.67%), Postives = 127/168 (75.60%), Query Frame = 1 

Query: 6   VRVIMVIVAMAWATLAM-----GEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 65
           +R  MV+V   W  L M     GE+LHKVGNS+GW PN NYT WSSSH FYLGDWLYFVF
Sbjct: 50  IRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVF 109

Query: 66  DKRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 125
           DKRYYNVLEVNK S+E CNEK+FIKNITRGGRDVFQLTEL PYFFI GGGYCFQGMKLAV
Sbjct: 110 DKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAV 169

Query: 126 LVCPT-AVAPAAPPSATPISGASL--SNPT--CWIMNALMLFVALFLV 164
            +      APA  P+ +  SG +   +NPT  C I+NAL+LFVA+F +
Sbjct: 170 YMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFL 217

[Close]
BLAST of CmoCh11G012020 vs. TrEMBL
Match: W9R4J9_9ROSA (Lamin-like protein OS=Morus notabilis GN=L484_020957 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.0e-38
Identity = 79/138 (57.25%), Postives = 103/138 (74.64%), Query Frame = 1 

Query: 8   VIMVIVAMAWATLAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNV 67
           V+M +V +  + +A    LH+VG S GWN N+NYTLWS+S   Y+GDWLYF FDKRYYNV
Sbjct: 20  VMMSLVGLKTSVMAK-TTLHRVGGSLGWNQNINYTLWSASQHIYVGDWLYFHFDKRYYNV 79

Query: 68  LEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLV---CP 127
           LEVNKTSYE+C+++ FIKNIT+GGRDV++LTE RPY+F++GGGYC+ GM++A+ V     
Sbjct: 80  LEVNKTSYENCDDQSFIKNITQGGRDVYELTEARPYYFLSGGGYCYHGMRVAIFVDDRLL 139

Query: 128 TAVAPAAPPSATPISGAS 143
            A  PA  P+  P   AS
Sbjct: 140 PATDPAPSPAPVPAQNAS 156

[Close]
BLAST of CmoCh11G012020 vs. TrEMBL
Match: M5X7N7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020122mg PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-37
Identity = 77/140 (55.00%), Postives = 101/140 (72.14%), Query Frame = 1 

Query: 8   VIMVIVAMAWATLAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNV 67
           V++  + + W   +    LHKVG ++GWN N+NYT WS++  FY+G+WL F FDKRYYNV
Sbjct: 19  VVITAITVGWLMTSANGVLHKVGGAQGWNQNVNYTEWSANENFYVGEWLLFNFDKRYYNV 78

Query: 68  LEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLVC---- 127
           LEVNK+S+ESCN++ F+KNITRGGRDV+QLTE RPY+F++GGGYCF GM+LA++      
Sbjct: 79  LEVNKSSFESCNDQGFMKNITRGGRDVYQLTEDRPYYFLSGGGYCFHGMRLALVALQDQQ 138

Query: 128 PTAVAPAAPPSATPISGASL 144
               APA  PS    S  SL
Sbjct: 139 QLPPAPALAPSTNAASPNSL 158

[Close]
BLAST of CmoCh11G012020 vs. TrEMBL
Match: A0A061EMK9_THECC (Early nodulin-like protein 20 OS=Theobroma cacao GN=TCM_018673 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.3e-37
Identity = 78/131 (59.54%), Postives = 100/131 (76.34%), Query Frame = 1 

Query: 8   VIMVIVAMAWATLAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNV 67
           V  +IV      + +G KLH+VG+ +GWNPN+NY+ W S  +FY+GDWL F FDK Y+NV
Sbjct: 7   VEFMIVMFVMFEVGVG-KLHRVGDKQGWNPNVNYSEWCSHEQFYVGDWLLFNFDKHYFNV 66

Query: 68  LEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLV-CPTA 127
           LEVNKTSYE+CN++ FI+NITRGGRDVF+LTE RPY+F++GGGYCF GMK+ V V  P A
Sbjct: 67  LEVNKTSYETCNDQNFIQNITRGGRDVFELTEARPYYFLSGGGYCFHGMKVVVNVEIPQA 126

Query: 128 VAPAAPPSATP 138
            APA   + +P
Sbjct: 127 PAPAPAKNDSP 136

[Close]
BLAST of CmoCh11G012020 vs. TrEMBL
Match: I1N688_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G026900 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-36
Identity = 86/167 (51.50%), Postives = 118/167 (70.66%), Query Frame = 1 

Query: 5   RVRVIMVIVAMAW-ATLAMGEK-LHKVGNSKGW-NPNLNYTLWSSSHRFYLGDWLYFVFD 64
           R+ V+   VAM W + +AMG   LHKVG SKGW N ++NYT WS+    Y+GDWL F FD
Sbjct: 8   RMMVVASAVAMGWLSVVAMGSPVLHKVGGSKGWINQDVNYTEWSAQEHIYVGDWLIFKFD 67

Query: 65  KRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVL 124
           KRY+NVLEVNKTSYE+C +++FIKNITRGGRDV Q+TE R Y++++GGGYCF GM++AV 
Sbjct: 68  KRYFNVLEVNKTSYENCIDRDFIKNITRGGRDVVQMTEARTYYYLSGGGYCFHGMRVAVQ 127

Query: 125 V----CPTAVAPAAPPSATPISGASLSNPTCWIMNALMLFVALFLVI 165
           V       A+A AAPP+ +P++  S S+P   +   + + +   +V+
Sbjct: 128 VQQEDQDPALAMAAPPAPSPVAYGS-SSPLPSVCTCIWIIIVANVVV 173

[Close]
BLAST of CmoCh11G012020 vs. TAIR10
Match: AT2G27035.1 (AT2G27035.1 early nodulin-like protein 20)

HSP 1 Score: 131.0 bits (328), Expect = 7.0e-31
Identity = 63/140 (45.00%), Postives = 92/140 (65.71%), Query Frame = 1 

Query: 8   VIMVIVAMAWATLAMGEKLHKVGNSK-GWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYN 67
           ++ V V +    + +   LH+VG  +  WN ++N++ W++  RFY GDWLYF F++  +N
Sbjct: 9   LVYVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHN 68

Query: 68  VLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLVCPTA 127
           +L+VNK+SYE C + ++I NITRGGRDVFQL E +PY+FI G GYC +GMKLA+ V P  
Sbjct: 69  ILQVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAITVLP-- 128

Query: 128 VAPAAPPSATPISGASLSNP 147
                PP + P +  S + P
Sbjct: 129 ----QPPPSAPTNFTSTTTP 142

[Close]
BLAST of CmoCh11G012020 vs. TAIR10
Match: AT3G01070.1 (AT3G01070.1 early nodulin-like protein 16)

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-27
Identity = 65/139 (46.76%), Postives = 86/139 (61.87%), Query Frame = 1 

Query: 1   MEEMRVRVIMVIVAMAWATLAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 60
           M  + V V   ++A   A   +  K   VG++K WNPN+NYT+W+    FYL DWLYFV+
Sbjct: 1   MARVAVLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVY 60

Query: 61  DKRYYNVLEVNKTSYESCNEKEFIKNITRG-GRDVFQLTELRPYFFIAG-GGYCFQGMKL 120
           ++  YNV+EVN+T+Y SCN    I N +RG GRD+  L   R Y+ I+G GG C+ GMKL
Sbjct: 61  ERNQYNVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKL 120

Query: 121 AVLVCPTAVAPAAPPSATP 138
           AVLV      P  PP+A P
Sbjct: 121 AVLV----EKPPPPPAAAP 135

[Close]
BLAST of CmoCh11G012020 vs. TAIR10
Match: AT5G15350.1 (AT5G15350.1 early nodulin-like protein 17)

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26
Identity = 63/141 (44.68%), Postives = 85/141 (60.28%), Query Frame = 1 

Query: 1   MEEMRVRVIMVIVAMAWATLAMG--EKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYF 60
           M    V +  V++A   A    G   K + VG +K WNPN+NYT+W+    FYLGDWLYF
Sbjct: 1   MARFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYF 60

Query: 61  VFDKRYYNVLEVNKTSYESCNEKEFIKNITRG-GRDVFQLTELRPYFFIAGGGYCFQGMK 120
           VFD+  +N+LEVNKT YE C     I+N TRG GRD+  L + + Y+ + G G C+ GMK
Sbjct: 61  VFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMK 120

Query: 121 LAVLVCPTAVAPAAPPSATPI 139
           L+V V    + P  PP + P+
Sbjct: 121 LSVKV--EKLPP--PPKSAPV 137

[Close]
BLAST of CmoCh11G012020 vs. TAIR10
Match: AT4G12880.1 (AT4G12880.1 early nodulin-like protein 19)

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26
Identity = 65/138 (47.10%), Postives = 82/138 (59.42%), Query Frame = 1 

Query: 5   RVRVIMVIVAMAWATLA----MGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 64
           R  V++  V +A+   A    +  K + VG+ K WNPN+NYTLW+    FY+GDWLYFVF
Sbjct: 3   RSMVLISAVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVF 62

Query: 65  DKRYYNVLEVNKTSYESCNEKEFIKNITRG-GRDVFQLTELRPYFFIAGGGYCFQGMKLA 124
            +  +N+LEVNK  YE C     I+N TRG GRD+  L E R Y+ + G G C QGMKL 
Sbjct: 63  YRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLD 122

Query: 125 VLVCPTAVAPAAPPSATP 138
           VLV      P  PP  TP
Sbjct: 123 VLV----ETPPPPPPFTP 136

[Close]
BLAST of CmoCh11G012020 vs. TAIR10
Match: AT2G26720.1 (AT2G26720.1 Cupredoxin superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 2.7e-14
Identity = 47/131 (35.88%), Postives = 73/131 (55.73%), Query Frame = 1 

Query: 20  LAMGEKLHKVGNSKGWNP-NLNYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNKTSYESC 79
           +A+G  +HKVGN+KGW     +Y  W+SS  F +GD L F ++K Y++V EV    +E C
Sbjct: 22  VAVGGTVHKVGNTKGWTMIGGDYEAWASSRVFQVGDTLVFAYNKDYHDVTEVTHNDFEMC 81

Query: 80  NEKEFIKNITRGGRDVFQLTELRPYFFIAG-GGYCFQGMKLAVLVCPTAVAPAAPPSATP 139
              + ++   + G D   LT+     FI G  G+C +G KL + V P ++   A P   P
Sbjct: 82  ESSKPLRRY-KTGSDSISLTKPGLQHFICGVPGHCKKGQKLQIHVLPASLGHVAVPVPGP 141

Query: 140 I-SGASLSNPT 148
           + S +S S+P+
Sbjct: 142 VRSQSSSSSPS 151

[Close]
BLAST of CmoCh11G012020 vs. NCBI nr
Match: gi|449437805|ref|XP_004136681.1| (PREDICTED: lamin-like protein [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 6.8e-52
Identity = 112/168 (66.67%), Postives = 127/168 (75.60%), Query Frame = 1 

Query: 6   VRVIMVIVAMAWATLAM-----GEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 65
           +R  MV+V   W  L M     GE+LHKVGNS+GW PN NYT WSSSH FYLGDWLYFVF
Sbjct: 15  IRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVF 74

Query: 66  DKRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 125
           DKRYYNVLEVNK S+E CNEK+FIKNITRGGRDVFQLTEL PYFFI GGGYCFQGMKLAV
Sbjct: 75  DKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAV 134

Query: 126 LVCPT-AVAPAAPPSATPISGASL--SNPT--CWIMNALMLFVALFLV 164
            +      APA  P+ +  SG +   +NPT  C I+NAL+LFVA+F +
Sbjct: 135 YMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFL 182

[Close]
BLAST of CmoCh11G012020 vs. NCBI nr
Match: gi|700204391|gb|KGN59524.1| (hypothetical protein Csa_3G824210 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 6.8e-52
Identity = 112/168 (66.67%), Postives = 127/168 (75.60%), Query Frame = 1 

Query: 6   VRVIMVIVAMAWATLAM-----GEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 65
           +R  MV+V   W  L M     GE+LHKVGNS+GW PN NYT WSSSH FYLGDWLYFVF
Sbjct: 50  IRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVF 109

Query: 66  DKRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 125
           DKRYYNVLEVNK S+E CNEK+FIKNITRGGRDVFQLTEL PYFFI GGGYCFQGMKLAV
Sbjct: 110 DKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAV 169

Query: 126 LVCPT-AVAPAAPPSATPISGASL--SNPT--CWIMNALMLFVALFLV 164
            +      APA  P+ +  SG +   +NPT  C I+NAL+LFVA+F +
Sbjct: 170 YMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFL 217

[Close]
BLAST of CmoCh11G012020 vs. NCBI nr
Match: gi|659085321|ref|XP_008443357.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 8.9e-52
Identity = 111/172 (64.53%), Postives = 129/172 (75.00%), Query Frame = 1 

Query: 5   RVRVIM-VIVAMAWATLAM------GEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLY 64
           R+R I  +++   W  L +      GE LHKVGNS+GW+PN NYT WS+SH FYLGDWLY
Sbjct: 11  RIRFIRKMVMVCGWLLLLVVRIGIKGEVLHKVGNSEGWSPNQNYTHWSTSHHFYLGDWLY 70

Query: 65  FVFDKRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMK 124
           FVFDKRYYNVLEVNK SYE CN+K+FIKNITRGGRDVFQL+EL PYFFI GGGYCFQGMK
Sbjct: 71  FVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMK 130

Query: 125 LAVLVCPTAVAPAAPPSATPISGASLS----NPT--CWIMNALMLFVALFLV 164
           LAV V     APA  P+A+  SG   S    NPT  C ++NAL+LFVA+FL+
Sbjct: 131 LAVYVSAVDSAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLL 182

[Close]
BLAST of CmoCh11G012020 vs. NCBI nr
Match: gi|764615028|ref|XP_004306117.2| (PREDICTED: lamin-like protein [Fragaria vesca subsp. vesca])

HSP 1 Score: 171.0 bits (432), Expect = 1.7e-39
Identity = 85/163 (52.15%), Postives = 123/163 (75.46%), Query Frame = 1 

Query: 4   MRVRVI---MVIVAMAWATLAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 63
           M+VR++   +++V + + T +   KL+KVG+ +GWNPN+NYT WS+   FY+G+WL F F
Sbjct: 2   MKVRMVTATVMVVVVGFLTTSAAAKLYKVGDEQGWNPNVNYTQWSADKEFYVGEWLIFNF 61

Query: 64  DKRYYNVLEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 123
           DKRYYNVLEVNKTSY+SCN++ FI NITRGGRDVF+L E RPY+F++ GGYC+ GMKLA+
Sbjct: 62  DKRYYNVLEVNKTSYDSCNDQAFITNITRGGRDVFELKEARPYYFLSSGGYCYHGMKLAL 121

Query: 124 LVCP-TAVAPAAPPSATPISGASLSN-PTCWIMNALMLFVALF 162
           +V     +APA  P+A+  S  SL++ P   I++ +++ +AL+
Sbjct: 122 VVQEHPPLAPALAPAASNASPNSLTSCPQMSIVSLIVISIALY 164

[Close]
BLAST of CmoCh11G012020 vs. NCBI nr
Match: gi|703073522|ref|XP_010089567.1| (Lamin-like protein [Morus notabilis])

HSP 1 Score: 166.4 bits (420), Expect = 4.3e-38
Identity = 79/138 (57.25%), Postives = 103/138 (74.64%), Query Frame = 1 

Query: 8   VIMVIVAMAWATLAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNV 67
           V+M +V +  + +A    LH+VG S GWN N+NYTLWS+S   Y+GDWLYF FDKRYYNV
Sbjct: 20  VMMSLVGLKTSVMAK-TTLHRVGGSLGWNQNINYTLWSASQHIYVGDWLYFHFDKRYYNV 79

Query: 68  LEVNKTSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLV---CP 127
           LEVNKTSYE+C+++ FIKNIT+GGRDV++LTE RPY+F++GGGYC+ GM++A+ V     
Sbjct: 80  LEVNKTSYENCDDQSFIKNITQGGRDVYELTEARPYYFLSGGGYCYHGMRVAIFVDDRLL 139

Query: 128 TAVAPAAPPSATPISGAS 143
            A  PA  P+  P   AS
Sbjct: 140 PATDPAPSPAPVPAQNAS 156

The following BLAST results are available for this feature:
BLAST of CmoCh11G012020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LAML_ARATH1.9e-2544.68Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1[more]
ENL2_ARATH1.8e-1242.02Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1[more]
MAVI_CUCPE1.3e-1034.31Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
BCB3_ARATH1.3e-1035.04Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1[more]
STEL_TOXVR1.9e-0629.41Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1[more]
BLAST of CmoCh11G012020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF66_CUCSA4.7e-5266.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824210 PE=4 SV=1[more]
W9R4J9_9ROSA3.0e-3857.25Lamin-like protein OS=Morus notabilis GN=L484_020957 PE=4 SV=1[more]
M5X7N7_PRUPE2.5e-3755.00Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020122mg PE=4 S... [more]
A0A061EMK9_THECC4.3e-3759.54Early nodulin-like protein 20 OS=Theobroma cacao GN=TCM_018673 PE=4 SV=1[more]
I1N688_SOYBN1.3e-3651.50Uncharacterized protein OS=Glycine max GN=GLYMA_19G026900 PE=4 SV=1[more]
BLAST of CmoCh11G012020 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27035.17.0e-3145.00 early nodulin-like protein 20[more]
AT3G01070.13.6e-2746.76 early nodulin-like protein 16[more]
AT5G15350.11.1e-2644.68 early nodulin-like protein 17[more]
AT4G12880.11.1e-2647.10 early nodulin-like protein 19[more]
AT2G26720.12.7e-1435.88 Cupredoxin superfamily protein[more]
BLAST of CmoCh11G012020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437805|ref|XP_004136681.1|6.8e-5266.67PREDICTED: lamin-like protein [Cucumis sativus][more]
gi|700204391|gb|KGN59524.1|6.8e-5266.67hypothetical protein Csa_3G824210 [Cucumis sativus][more]
gi|659085321|ref|XP_008443357.1|8.9e-5264.53PREDICTED: lamin-like protein [Cucumis melo][more]
gi|764615028|ref|XP_004306117.2|1.7e-3952.15PREDICTED: lamin-like protein [Fragaria vesca subsp. vesca][more]
gi|703073522|ref|XP_010089567.1|4.3e-3857.25Lamin-like protein [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003245Phytocyanin_dom
IPR008972Cupredoxin
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G012020.1CmoCh11G012020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Phytocyanin domainPRODOMPD003122coord: 58..122
score: 4.0
IPR003245Phytocyanin domainPFAMPF02298Cu_bind_likecoord: 35..116
score: 8.5
IPR003245Phytocyanin domainPROFILEPS51485PHYTOCYANINcoord: 25..124
score: 29
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 26..123
score: 1.9
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 25..123
score: 5.11
NoneNo IPR availablePANTHERPTHR33021FAMILY NOT NAMEDcoord: 1..142
score: 1.2
NoneNo IPR availablePANTHERPTHR33021:SF17SUBFAMILY NOT NAMEDcoord: 1..142
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G012020Cucurbita maxima (Rimu)cmacmoB112
CmoCh11G012020Cucurbita pepo (Zucchini)cmocpeB127
CmoCh11G012020Silver-seed gourdcarcmoB1113