CmoCh11G011390 (gene) Cucurbita moschata (Rifu)

NameCmoCh11G011390
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPol polyprotein
LocationCmo_Chr11 : 6426444 .. 6428002 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGAGGTTGTTAGAAAGGAGATTCTCAAATGGCTAGATGCTGGAATAATTTATCCAATTGCAAACAACAGCTGGGTCAGTCCTATTCAATGTGTTCCTAATAAAGGAGGGATAACAGTAATGGCAAATAAGAACAATGAGTTGATCCCCACTAGAATAGTGAATGGATGGAGAATTTGCATGGATTATAGAAGGCTAAACAAAGCGACACGTAAGGATCATTTTCCCTTACCATTCATTGATCAAATGCTTGATAGGCTTGCCGGAAAGTCACATTATTGCTTCTTGGATGGTTATTCGGGATACAATCAAATTACAATCAGTCCAGAAGATCAAGAGAAAACTACATTCACATGCCCATATGGAATTTTTGTCTTTAGACGAATGCCCTTTGGACTATGTAATGCTCCAGCAAAATTTCAACGTTGCATGATGACCATGTTTACAGATATGGTAGAAACATTTATGGAGATATTCACGGATGATTTTTCGGTTTATGGAGAATCTTTTGAGACTTGTTTGTGCAATTTAGGGAAGGTTCTACAAAGATGTGAAGAGAAGAATCTTGTACTGAATTGGAAAAAATATCATTTTATGGTCAATGAGAGAATAGTGTCAGGCCACAAGATCTCAAGAAGAGGAATAGAAGTTGATAGAGCCAAGATAGAAACTATTGAAAGATTGAATCCACCTACGTCAGTTAAAGGTATAAGAAGCTTTTTGAGCCATGCAGGGTTTTATAGGAAGTTTATTAAAGATTTCTCCAAGATTGCAAAACTATTGTGTAGTTTGTTGGAGTCAAATAGAAAATTCGTTTTTGACAAACAATGCATGACTGCCTTCCAAACATTAAAGACAGTGCTGACCACAGTTCCTATAATGTCAACACCCGATTGGAATTTACCATTTGAGTTGATGTGTGATGCTAGTGGCCATGCTGTGGGGGCAATGTTAGGACAGAAAAAGGGGAAGCTACTTCATCCTATCTATTATGCCAGCAAAACGTTGAATGAGGCTCAAGTGAATTATACAACCACTGAAAAAGAATTGTTGGCCGTAGTATTCGCTGTTGAAAAGTTCAGAGCTTCTTTATTTGGAGAGAAGGTGAAAGTGTACACTGACCACGCAGCAATCAAGCACCTAATGATGAAATCGAATGCCAAGCCAATATTAATTAGATGGATTCTATTGTTACAAGAGTTCGAGATAGAAATCGTGGACCCGAAAGGAGTTAATAACCATGTAGCGGATCACTTATCTAGAATGGAGAACATGGAAGAAAAGGTCAATAGCAAAGAAATTGATGATGCATTTCCGAATGAACAGTTGCTTTGGATAAACAGCAGTAGCAGCAACTACAGCAGTAGCAGAATGACAGCAACTCCATGGTATGTAGACATAGCAAATTTTTTGGCTTGTGCCATCATACCCGAAGAGAAAAATTATCAACAAAGGAAGAGGTTTTTCCATGAATCCAAAAGTTACATTTGGTATGAACCTTTTCTTTTTAAACAATGTGGAGATGGCATAATGAGAAGATGCATTCCAGACAGTGA

mRNA sequence

ATGATGGAGGTTGTTAGAAAGGAGATTCTCAAATGGCTAGATGCTGGAATAATTTATCCAATTGCAAACAACAGCTGGGTCAGTCCTATTCAATGTGTTCCTAATAAAGGAGGGATAACAGTAATGGCAAATAAGAACAATGAGTTGATCCCCACTAGAATAGTGAATGGATGGAGAATTTGCATGGATTATAGAAGGCTAAACAAAGCGACACGTAAGGATCATTTTCCCTTACCATTCATTGATCAAATGCTTGATAGGCTTGCCGGAAAGTCACATTATTGCTTCTTGGATGGTTATTCGGGATACAATCAAATTACAATCAGTCCAGAAGATCAAGAGAAAACTACATTCACATGCCCATATGGAATTTTTGTCTTTAGACGAATGCCCTTTGGACTATGTAATGCTCCAGCAAAATTTCAACGTTGCATGATGACCATGTTTACAGATATGGTAGAAACATTTATGGAGATATTCACGGATGATTTTTCGGTTTATGGAGAATCTTTTGAGACTTGTTTGTGCAATTTAGGGAAGGTTCTACAAAGATGTGAAGAGAAGAATCTTGTACTGAATTGGAAAAAATATCATTTTATGGTCAATGAGAGAATAGTGTCAGGCCACAAGATCTCAAGAAGAGGAATAGAAGTTGATAGAGCCAAGATAGAAACTATTGAAAGATTGAATCCACCTACGTCAGTTAAAGGTATAAGAAGCTTTTTGAGCCATGCAGGGTTTTATAGGAAGTTTATTAAAGATTTCTCCAAGATTGCAAAACTATTGTGTAGTTTGTTGGAGTCAAATAGAAAATTCGTTTTTGACAAACAATGCATGACTGCCTTCCAAACATTAAAGACAGTGCTGACCACAGTTCCTATAATGTCAACACCCGATTGGAATTTACCATTTGAGTTGATGTGTGATGCTAGTGGCCATGCTGTGGGGGCAATGTTAGGACAGAAAAAGGGGAAGCTACTTCATCCTATCTATTATGCCAGCAAAACGTTGAATGAGGCTCAAGTGAATTATACAACCACTGAAAAAGAATTGTTGGCCGTAGTATTCGCTGTTGAAAAGTTCAGAGCTTCTTTATTTGGAGAGAAGGTGAAAGTGTACACTGACCACGCAGCAATCAAGCACCTAATGATGAAATCGAATGCCAAGCCAATATTAATTAGATGGATTCTATTGTTACAAGAGTTCGAGATAGAAATCGTGGACCCGAAAGGAGTTAATAACCATGTAGCGGATCACTTATCTAGAATGGAGAACATGGAAGAAAAGGTCAATAGCAAAGAAATTGATGATGCATTTCCGAATGAACAGTTGCTTTGGATAAACAGCAGTAGCAGCAACTACAGCAGTAGCAGAATGACAGCAACTCCATGACAGTGA

Coding sequence (CDS)

ATGATGGAGGTTGTTAGAAAGGAGATTCTCAAATGGCTAGATGCTGGAATAATTTATCCAATTGCAAACAACAGCTGGGTCAGTCCTATTCAATGTGTTCCTAATAAAGGAGGGATAACAGTAATGGCAAATAAGAACAATGAGTTGATCCCCACTAGAATAGTGAATGGATGGAGAATTTGCATGGATTATAGAAGGCTAAACAAAGCGACACGTAAGGATCATTTTCCCTTACCATTCATTGATCAAATGCTTGATAGGCTTGCCGGAAAGTCACATTATTGCTTCTTGGATGGTTATTCGGGATACAATCAAATTACAATCAGTCCAGAAGATCAAGAGAAAACTACATTCACATGCCCATATGGAATTTTTGTCTTTAGACGAATGCCCTTTGGACTATGTAATGCTCCAGCAAAATTTCAACGTTGCATGATGACCATGTTTACAGATATGGTAGAAACATTTATGGAGATATTCACGGATGATTTTTCGGTTTATGGAGAATCTTTTGAGACTTGTTTGTGCAATTTAGGGAAGGTTCTACAAAGATGTGAAGAGAAGAATCTTGTACTGAATTGGAAAAAATATCATTTTATGGTCAATGAGAGAATAGTGTCAGGCCACAAGATCTCAAGAAGAGGAATAGAAGTTGATAGAGCCAAGATAGAAACTATTGAAAGATTGAATCCACCTACGTCAGTTAAAGGTATAAGAAGCTTTTTGAGCCATGCAGGGTTTTATAGGAAGTTTATTAAAGATTTCTCCAAGATTGCAAAACTATTGTGTAGTTTGTTGGAGTCAAATAGAAAATTCGTTTTTGACAAACAATGCATGACTGCCTTCCAAACATTAAAGACAGTGCTGACCACAGTTCCTATAATGTCAACACCCGATTGGAATTTACCATTTGAGTTGATGTGTGATGCTAGTGGCCATGCTGTGGGGGCAATGTTAGGACAGAAAAAGGGGAAGCTACTTCATCCTATCTATTATGCCAGCAAAACGTTGAATGAGGCTCAAGTGAATTATACAACCACTGAAAAAGAATTGTTGGCCGTAGTATTCGCTGTTGAAAAGTTCAGAGCTTCTTTATTTGGAGAGAAGGTGAAAGTGTACACTGACCACGCAGCAATCAAGCACCTAATGATGAAATCGAATGCCAAGCCAATATTAATTAGATGGATTCTATTGTTACAAGAGTTCGAGATAGAAATCGTGGACCCGAAAGGAGTTAATAACCATGTAGCGGATCACTTATCTAGAATGGAGAACATGGAAGAAAAGGTCAATAGCAAAGAAATTGATGATGCATTTCCGAATGAACAGTTGCTTTGGATAAACAGCAGTAGCAGCAACTACAGCAGTAGCAGAATGACAGCAACTCCATGA
BLAST of CmoCh11G011390 vs. Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-67
Identity = 160/452 (35.40%), Postives = 246/452 (54.42%), Query Frame = 1

Query: 5   VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDY 64
           V  +I   L+ GII   +N+ + SPI  VP K   +                 +RI +DY
Sbjct: 223 VESQIQDMLNQGIIRT-SNSPYNSPIWVVPKKQDASGKQK-------------FRIVIDY 282

Query: 65  RRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTCPYGI 124
           R+LN+ T  D  P+P +D++L +L   +++  +D   G++QI + PE   KT F+  +G 
Sbjct: 283 RKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGH 342

Query: 125 FVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQR 184
           + + RMPFGL NAPA FQRCM  +   ++     ++ DD  V+  S +  L +LG V ++
Sbjct: 343 YEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEK 402

Query: 185 CEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSH 244
             + NL L   K  F+  E    GH ++  GI+ +  KIE I++   PT  K I++FL  
Sbjct: 403 LAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGL 462

Query: 245 AGFYRKFIKDFSKIAKLLCSLLESNRKF-VFDKQCMTAFQTLKTVLTTVPIMSTPDWNLP 304
            G+YRKFI +F+ IAK +   L+ N K    + +  +AF+ LK +++  PI+  PD+   
Sbjct: 463 TGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKK 522

Query: 305 FELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRA 364
           F L  DAS  A+GA+L Q      HP+ Y S+TLNE ++NY+T EKELLA+V+A + FR 
Sbjct: 523 FTLTTDASDVALGAVLSQDG----HPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRH 582

Query: 365 SLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHLSRM 424
            L G   ++ +DH  +  L    +    L RW + L EF+ +I   KG  N VAD LSR+
Sbjct: 583 YLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSRI 642

Query: 425 ENMEEKVNSKEIDDAF--PNEQLLWINSSSSN 454
           + +EE   S++   +    N  L++I     N
Sbjct: 643 K-LEETYLSEQTQHSAEEDNSDLIFITERPLN 655

BLAST of CmoCh11G011390 vs. Swiss-Prot
Match: POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster GN=pol PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.1e-64
Identity = 160/469 (34.12%), Postives = 253/469 (53.94%), Query Frame = 1

Query: 5   VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDY 64
           V ++I + L  GII P +N+ + SPI  VP K         N E         +R+ +D+
Sbjct: 139 VERQIDELLQDGIIRP-SNSPYNSPIWIVPKK------PKPNGE-------KQYRMVVDF 198

Query: 65  RRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTCPYGI 124
           +RLN  T  D +P+P I+  L  L    ++  LD  SG++QI +   D  KT F+   G 
Sbjct: 199 KRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGK 258

Query: 125 FVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQR 184
           + F R+PFGL NAPA FQR +  +  + +     ++ DD  V+ E ++T   NL  VL  
Sbjct: 259 YEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLAS 318

Query: 185 CEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSH 244
             + NL +N +K HF+  +    G+ ++  GI+ D  K+  I  + PPTSVK ++ FL  
Sbjct: 319 LSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGM 378

Query: 245 AGFYRKFIKDFSKIAKLLCSL---LESNRK--------FVFDKQCMTAFQTLKTVLTTVP 304
             +YRKFI+D++K+AK L +L   L +N K           D+  + +F  LK++L +  
Sbjct: 379 TSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSE 438

Query: 305 IMSTPDWNLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLA 364
           I++ P +  PF L  DAS  A+GA+L Q       PI Y S++LN+ + NY T EKE+LA
Sbjct: 439 ILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLA 498

Query: 365 VVFAVEKFRASLFGE-KVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGV 424
           ++++++  RA L+G   +KVYTDH  +   +   N    L RW   ++E+  E++   G 
Sbjct: 499 IIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGK 558

Query: 425 NNHVADHLSRMENMEEKVNSKEID-DAFPNEQLLWI-NSSSSNYSSSRM 460
           +N VAD LSR   +  ++N    D DA P + +  +  + S+ + SSR+
Sbjct: 559 SNVVADALSR---IPPQLNQLSTDLDANPEDDMQSLATAHSALHDSSRL 590

BLAST of CmoCh11G011390 vs. Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.4e-61
Identity = 151/453 (33.33%), Postives = 240/453 (52.98%), Query Frame = 1

Query: 5   VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDY 64
           V  ++ + L+ G+I   +N+ + SP   VP K   +  ANK            +R+ +DY
Sbjct: 222 VENQVQEMLNQGLIRE-SNSPYNSPTWVVPKKPDASG-ANK------------YRVVIDY 281

Query: 65  RRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTCPYGI 124
           R+LN+ T  D +P+P +D++L +L    ++  +D   G++QI +  E   KT F+   G 
Sbjct: 282 RKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGH 341

Query: 125 FVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQR 184
           + + RMPFGL NAPA FQRCM  +   ++     ++ DD  ++  S    L ++  V  +
Sbjct: 342 YEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTK 401

Query: 185 CEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSH 244
             + NL L   K  F+  E    GH ++  GI+ +  K++ I     PT  K IR+FL  
Sbjct: 402 LADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGL 461

Query: 245 AGFYRKFIKDFSKIAKLLCSLLESNRKFVFDK-QCMTAFQTLKTVLTTVPIMSTPDWNLP 304
            G+YRKFI +++ IAK + S L+   K    K + + AF+ LK ++   PI+  PD+   
Sbjct: 462 TGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKK 521

Query: 305 FELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRA 364
           F L  DAS  A+GA+L Q      HPI + S+TLN+ ++NY+  EKELLA+V+A + FR 
Sbjct: 522 FVLTTDASNLALGAVLSQNG----HPISFISRTLNDHELNYSAIEKELLAIVWATKTFRH 581

Query: 365 SLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHLSRM 424
            L G +  + +DH  ++ L         L RW + L E++ +I   KG  N VAD LSR+
Sbjct: 582 YLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSRI 641

Query: 425 ENMEEKVNSKEIDDAF--PNEQLLWINSSSSNY 455
           + +EE  +S+    +    N  L+ +     NY
Sbjct: 642 K-IEENHHSEATQHSAEEDNSNLIHLTEKPINY 655

BLAST of CmoCh11G011390 vs. Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.4e-60
Identity = 141/428 (32.94%), Postives = 222/428 (51.87%), Query Frame = 1

Query: 2   MEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRIC 61
           +E ++ ++ K +   I+ P  +  + SP+  VP K              P      WR+ 
Sbjct: 327 VEEIQAQVQKLIKDKIVEPSVSQ-YNSPLLLVPKKSS------------PNSDKKKWRLV 386

Query: 62  MDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTCP 121
           +DYR++NK    D FPLP ID +LD+L    ++  LD  SG++QI +    ++ T+F+  
Sbjct: 387 IDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTS 446

Query: 122 YGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKV 181
            G + F R+PFGL  AP  FQR M   F+ +  +   ++ DD  V G S +  L NL +V
Sbjct: 447 NGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTEV 506

Query: 182 LQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSF 241
             +C E NL L+ +K  F ++E    GHK + +GI  D  K + I+    P      R F
Sbjct: 507 FGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRF 566

Query: 242 LSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDWN 301
           ++   +YR+FIK+F+  ++ +  L + N  F +  +C  AF  LK+ L    ++  PD++
Sbjct: 567 VAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFS 626

Query: 302 LPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKF 361
             F +  DAS  A GA+L Q       P+ YAS+   + + N +TTE+EL A+ +A+  F
Sbjct: 627 KEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKSTTEQELAAIHWAIIHF 686

Query: 362 RASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHLS 421
           R  ++G+   V TDH  + +L    N    L R  L L+E+   +   KG +NHVAD LS
Sbjct: 687 RPYIYGKHFTVKTDHRPLTYLFSMVNPSSKLTRIRLELEEYNFTVEYLKGKDNHVADALS 741

Query: 422 RMENMEEK 430
           R+   E K
Sbjct: 747 RITIKELK 741

BLAST of CmoCh11G011390 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-53
Identity = 146/439 (33.26%), Postives = 215/439 (48.97%), Query Frame = 1

Query: 5    VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDY 64
            + K + K LD   I P + +   SP+  VP K G                   +R+C+DY
Sbjct: 638  INKIVQKLLDNKFIVP-SKSPCSSPVVLVPKKDGT------------------FRLCVDY 697

Query: 65   RRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTCPYGI 124
            R LNKAT  D FPLP ID +L R+     +  LD +SGY+QI + P+D+ KT F  P G 
Sbjct: 698  RTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGK 757

Query: 125  FVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQR 184
            + +  MPFGL NAP+ F R M   F D+   F+ ++ DD  ++ ES E    +L  VL+R
Sbjct: 758  YEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLER 817

Query: 185  CEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSH 244
             + +NL++  KK  F   E    G+ I  + I   + K   I     P +VK  + FL  
Sbjct: 818  LKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGM 877

Query: 245  AGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMT-----AFQTLKTVLTTVPIMSTPD 304
              +YR+FI + SKIA+ +       + F+ DK   T     A + LK  L   P++   +
Sbjct: 878  INYYRRFIPNCSKIAQPI-------QLFICDKSQWTEKQDKAIEKLKAALCNSPVLVPFN 937

Query: 305  WNLPFELMCDASGHAVGAMLGQ--KKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFA 364
                + L  DAS   +GA+L +   K KL+  + Y SK+L  AQ NY   E ELL ++ A
Sbjct: 938  NKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKA 997

Query: 365  VEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVA 424
            +  FR  L G+   + TDH ++  L  K+     + RW+  L  ++  +    G  N VA
Sbjct: 998  LHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVA 1048

Query: 425  DHLSRMENMEEKVNSKEID 437
            D +SR         S+ ID
Sbjct: 1058 DAISRAIYTITPETSRPID 1048

BLAST of CmoCh11G011390 vs. TrEMBL
Match: A0A151QNZ0_CAJCA (Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment) OS=Cajanus cajan GN=KK1_047401 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 9.1e-178
Identity = 294/445 (66.07%), Postives = 363/445 (81.57%), Query Frame = 1

Query: 1   MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRI 60
           M E VRKE+LK L+AG+IYPI+++ WVSP+Q VP KGG+TV+ N+ NELIPTR V GWR+
Sbjct: 221 MKEEVRKEVLKLLEAGMIYPISDSDWVSPVQVVPKKGGMTVITNEKNELIPTRTVTGWRM 280

Query: 61  CMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTC 120
           C+DYR+LN+ATRKDHFPLPF+DQML+RLAG+++YCFLDGYSGYNQ  ++PEDQEKT+FTC
Sbjct: 281 CIDYRKLNQATRKDHFPLPFMDQMLERLAGQAYYCFLDGYSGYNQFAVNPEDQEKTSFTC 340

Query: 121 PYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGK 180
           P+G+F +RRMPFGLCNAPA FQRCM+ +F D+VE  +E+F DDF V+G SF+ CL NL  
Sbjct: 341 PFGVFAYRRMPFGLCNAPATFQRCMLAIFADLVEKCIEVFMDDFFVFGSSFDVCLENLEL 400

Query: 181 VLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRS 240
           VL+RC + NLVLNW+K HFMV + IV GHKIS RGIEVD+AK++ IE+L PP +VKG+RS
Sbjct: 401 VLKRCIDTNLVLNWEKCHFMVQKGIVLGHKISARGIEVDKAKVDVIEKLPPPINVKGVRS 460

Query: 241 FLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW 300
           FL H GFYR+FIKDFSKIAK LC+LL  ++ F+FD++CM AF TLK  LTT P++  PDW
Sbjct: 461 FLRHTGFYRRFIKDFSKIAKPLCTLLNKDQPFLFDEECMKAFLTLKNKLTTAPVIVAPDW 520

Query: 301 NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEK 360
           +  FELMCDAS +AVGA+LGQ++ K+ H IYYASK LN AQ+NY TTEKELLA+V+A+EK
Sbjct: 521 SESFELMCDASDYAVGAVLGQRRNKVFHSIYYASKVLNGAQLNYATTEKELLAIVYALEK 580

Query: 361 FRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHL 420
           FRA L G KV VYTDHAAIK+L+ K+ +KP LIRW+LLLQEF +EI D KG  N VADHL
Sbjct: 581 FRAYLIGSKVIVYTDHAAIKYLLTKAESKPRLIRWVLLLQEFNLEIKDKKGSENLVADHL 640

Query: 421 SRMENMEEKVNSKEIDDAFPNEQLL 446
            R+ N E      EI D FP+E LL
Sbjct: 641 LRLVNEEVTCKEGEIKDEFPDEALL 665

BLAST of CmoCh11G011390 vs. TrEMBL
Match: E2DN01_BETVU (Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 6.5e-176
Identity = 296/451 (65.63%), Postives = 366/451 (81.15%), Query Frame = 1

Query: 1    MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRI 60
            M EVV+KE++K LDAGIIYPI+++ WVSP+Q VP KGG TV+ N+ NELI TR+V GWR+
Sbjct: 886  MQEVVKKEVMKLLDAGIIYPISDSKWVSPVQVVPKKGGTTVVKNEKNELIATRVVTGWRM 945

Query: 61   CMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTC 120
            C+DYR+LN AT+KDHFPLPFIDQML+RLA  SH+C+LDGYSG+ QI I P+DQEKTTFTC
Sbjct: 946  CIDYRKLNVATKKDHFPLPFIDQMLERLACHSHFCYLDGYSGFFQIPIHPDDQEKTTFTC 1005

Query: 121  PYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGK 180
            PYG F +RRMPFGLCNAPA FQRCMM +F++ +E+ MEIF DDFSVYG +F+ CL NL K
Sbjct: 1006 PYGTFAYRRMPFGLCNAPATFQRCMMAIFSEFIESIMEIFMDDFSVYGINFDACLLNLTK 1065

Query: 181  VLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRS 240
            VL+RCE+ +LVLNW+K HFMV E +V GH IS RGI+VD+AKI+ IE+L PP +VKG+R 
Sbjct: 1066 VLKRCEDVHLVLNWEKCHFMVTEGVVLGHIISERGIQVDKAKIQVIEQLPPPVNVKGVRG 1125

Query: 241  FLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW 300
            FL HAGFYR+FIKDFSKIAK L  LL  +  F+F  +C+ +F  +K  L T PI+ +PDW
Sbjct: 1126 FLGHAGFYRRFIKDFSKIAKPLTQLLLKDAPFLFTNECLVSFNRIKQALITAPIIRSPDW 1185

Query: 301  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEK 360
             LPFE+MCDAS +AVGA+LGQ+K  +LH IYYASKTL+EAQVNY TTEKELLAVV+A++K
Sbjct: 1186 TLPFEIMCDASDYAVGAVLGQRKDNILHAIYYASKTLDEAQVNYATTEKELLAVVYALDK 1245

Query: 361  FRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHL 420
            FR  L G KV VYTDHAA+K+L+ K  AKP LIRWILLLQEF++EI D KG  N VADHL
Sbjct: 1246 FRTYLLGSKVIVYTDHAALKYLLAKKEAKPRLIRWILLLQEFDLEIRDKKGAENVVADHL 1305

Query: 421  SRME--NMEEKVNSKEIDDAFPNEQLLWINS 450
            SR++  +MEE +    IDD+FP+++LL + S
Sbjct: 1306 SRLQYADMEEGL---PIDDSFPDDKLLAVTS 1333

BLAST of CmoCh11G011390 vs. TrEMBL
Match: A0A151UCZ5_CAJCA (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan GN=KK1_046633 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 2.7e-174
Identity = 293/450 (65.11%), Postives = 363/450 (80.67%), Query Frame = 1

Query: 1   MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRI 60
           M EVVRKE++K L+AG+I PI++++WVSP+Q VP  GG+TV+ N+ NELIPTR V GWR+
Sbjct: 488 MKEVVRKEVVKLLEAGMICPISDSAWVSPVQVVPKMGGMTVVKNEKNELIPTRTVTGWRM 547

Query: 61  CMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTC 120
           C+DYR+LN+ATRKDHFPLPF+DQML+RLAG+S+YCFLDGYSGYNQI + P+DQEKT FTC
Sbjct: 548 CIDYRKLNQATRKDHFPLPFMDQMLERLAGQSYYCFLDGYSGYNQIAVDPQDQEKTAFTC 607

Query: 121 PYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGK 180
           P+G+F +RRMPFGLCNAPA FQRCM+ +F D++E  +E+F DDFSV+G  F+ CL NL  
Sbjct: 608 PFGVFAYRRMPFGLCNAPATFQRCMLAIFADLIEKCIEVFMDDFSVFGSFFDLCLKNLDI 667

Query: 181 VLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRS 240
           VL+RC E NLVLNW+K HFMV E IV GHKIS +GIEVD AK+E I +L PP +VKGIRS
Sbjct: 668 VLKRCVETNLVLNWEKCHFMVTEGIVLGHKISAKGIEVDPAKVEVIAKLPPPINVKGIRS 727

Query: 241 FLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW 300
           FL HAGFYR+FIKDFSKIAK L +LL  N KF FD +C+ AF  LK  L + PI++ PDW
Sbjct: 728 FLGHAGFYRRFIKDFSKIAKPLSNLLVKNSKFDFDDECLKAFDLLKKNLVSAPIITAPDW 787

Query: 301 NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEK 360
              FELMCDAS +A+GA LGQ+K K+ H I+YASK LNE QVNY T EKELLA+V+A+EK
Sbjct: 788 KYDFELMCDASDYAIGAALGQRKDKIFHIIHYASKVLNETQVNYATNEKELLAIVYALEK 847

Query: 361 FRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHL 420
           FR  L G K+ V+TDHAAIK+L+ K+++KP LIRWILLLQEF++EI D KG  NHVADHL
Sbjct: 848 FRPYLVGSKITVFTDHAAIKYLLTKADSKPRLIRWILLLQEFDLEIKDKKGCENHVADHL 907

Query: 421 SRMENMEEKVNSK--EIDDAFPNEQLLWIN 449
           SR+ N  EKV S+  E+ + FP+E+L  I+
Sbjct: 908 SRLVN--EKVTSQEGEVSEEFPDEKLFAIS 935

BLAST of CmoCh11G011390 vs. TrEMBL
Match: A0A0D3A328_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.5e-172
Identity = 296/454 (65.20%), Postives = 354/454 (77.97%), Query Frame = 1

Query: 1    MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRI 60
            +MEVV+KEILK L AG+IYPI++++WVSP+  VP KGGITV+ N+  ELIPTR V G R+
Sbjct: 999  LMEVVKKEILKLLSAGVIYPISDSTWVSPVHVVPKKGGITVITNEKAELIPTRTVTGHRM 1058

Query: 61   CMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTC 120
            C+DYR+LN ATRKDHFPLPFIDQML+RLA   +YCFLDGYSG+ QI I P+DQEKTTFTC
Sbjct: 1059 CIDYRKLNSATRKDHFPLPFIDQMLERLANHPYYCFLDGYSGFFQIPIHPDDQEKTTFTC 1118

Query: 121  PYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGK 180
            PYG F +RRMPFGLCNAPA FQRCMM++FTD++E  ME+F DDFSVYG SF  CL NL K
Sbjct: 1119 PYGTFAYRRMPFGLCNAPATFQRCMMSIFTDLIEDIMEVFMDDFSVYGSSFSDCLANLCK 1178

Query: 181  VLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRS 240
            VL+RCEEKNLVLNW+K HFMV + IV GH+IS +GIEVD+AKIE +  L PP +V+ IRS
Sbjct: 1179 VLERCEEKNLVLNWEKCHFMVKDGIVLGHRISEQGIEVDKAKIEVMTSLQPPRTVRDIRS 1238

Query: 241  FLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW 300
            FL HAGFYR+FIKDFS IA+ L  LL    KFVFD  C+ AFQ LK  L + PI+  PDW
Sbjct: 1239 FLGHAGFYRRFIKDFSMIARPLTRLLCKEAKFVFDADCLAAFQILKKSLVSAPIVQPPDW 1298

Query: 301  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEK 360
            +LPFE+MCDAS +A+GA+LGQ+K K LH IYYAS+TL++AQ+ Y TTEKELLAVV+A EK
Sbjct: 1299 DLPFEIMCDASDYAIGAVLGQRKDKKLHVIYYASRTLDDAQIKYATTEKELLAVVYAFEK 1358

Query: 361  FRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHL 420
            FR+ L G KV V+TDHAA+K+LM K +AKP L+RWILLLQEF+IEI D +G  N VADHL
Sbjct: 1359 FRSYLVGSKVIVHTDHAALKYLMTKKDAKPRLLRWILLLQEFDIEIRDKRGAENGVADHL 1418

Query: 421  SRMENMEEKVNSKEIDDAFPNEQLLWINSSSSNY 455
            SRM    E      +DD  P E +  I      Y
Sbjct: 1419 SRMRVEAE----TPLDDTLPEENVYVITLLEDEY 1448

BLAST of CmoCh11G011390 vs. TrEMBL
Match: Q2AA50_ASPOF (Retrotransposon gag protein OS=Asparagus officinalis GN=19.t00014 PE=4 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 1.3e-171
Identity = 293/449 (65.26%), Postives = 355/449 (79.06%), Query Frame = 1

Query: 1    MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRI 60
            M E VRK+ILK LD GIIYPI+++SWVSP+Q VP K GITV+ N+ NELIPTRI  GWR+
Sbjct: 845  MKEAVRKDILKCLDHGIIYPISDSSWVSPVQVVPKKSGITVIQNEANELIPTRIQTGWRV 904

Query: 61   CMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTC 120
            C+DYR+LN ATRKDHFPLPFIDQML+RLAG   YCFLDGYSGYNQI I+PEDQEKTTFTC
Sbjct: 905  CIDYRKLNLATRKDHFPLPFIDQMLERLAGHEFYCFLDGYSGYNQIPIAPEDQEKTTFTC 964

Query: 121  PYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGK 180
            PYG F +RRMPFGLCNAPA FQRCM+++F+DMVE F+EIF DDFS++G++F  CL +L  
Sbjct: 965  PYGTFAYRRMPFGLCNAPATFQRCMISIFSDMVERFLEIFMDDFSIFGDTFSQCLHHLKL 1024

Query: 181  VLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRS 240
            VL+RC EKNL LNW+K HFMV + IV GH +S RGIEVD+AK++ I  L PP +VK +RS
Sbjct: 1025 VLERCREKNLTLNWEKCHFMVKQGIVLGHVVSNRGIEVDKAKVDIISNLPPPKTVKDVRS 1084

Query: 241  FLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW 300
            FL HAGFYR+FIKDFSKIA+ L +LL  +  FVF   C+ AF+ LK  LTT PI+  PDW
Sbjct: 1085 FLGHAGFYRRFIKDFSKIARPLTNLLAKDTSFVFSPDCLKAFEYLKKELTTAPIIHAPDW 1144

Query: 301  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEK 360
             LPFELMCDAS  A+GA+LGQ+     H IYYAS+TLN+AQ NY+ TEKE LAVVFA+EK
Sbjct: 1145 TLPFELMCDASDSAIGAVLGQRFDGKPHVIYYASRTLNDAQQNYSVTEKEFLAVVFALEK 1204

Query: 361  FRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHL 420
            FR+ L G   KV+ DHAA+K+L+ K +AK  LIRWILLLQEF+I+I+D +G  N VADHL
Sbjct: 1205 FRSYLIGSLTKVFNDHAALKYLLTKKDAKARLIRWILLLQEFDIQILDRRGTENPVADHL 1264

Query: 421  SRMENMEEKVNSKEIDDAFPNEQLLWINS 450
            SR+ N     ++  I++ FP+EQLL I S
Sbjct: 1265 SRLPN--APTSTVPINEHFPDEQLLEIQS 1291

BLAST of CmoCh11G011390 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-15
Identity = 46/130 (35.38%), Postives = 70/130 (53.85%), Query Frame = 1

Query: 177 NLGKVLQRCEEKNLVLNWKKYHFMVNERIVSGHK--ISRRGIEVDRAKIETIERLNPPTS 236
           +LG VLQ  E+     N KK  F   +    GH+  IS  G+  D AK+E +     P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 237 VKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPI 296
              +R FL   G+YR+F+K++ KI + L  LL+ N    + +    AF+ LK  +TT+P+
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTLPV 122

Query: 297 MSTPDWNLPF 305
           ++ PD  LPF
Sbjct: 123 LALPDLKLPF 131

BLAST of CmoCh11G011390 vs. NCBI nr
Match: gi|848912141|ref|XP_012854372.1| (PREDICTED: uncharacterized protein LOC105973875 [Erythranthe guttata])

HSP 1 Score: 665.2 bits (1715), Expect = 8.1e-188
Identity = 318/449 (70.82%), Postives = 377/449 (83.96%), Query Frame = 1

Query: 1   MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRI 60
           M EVV+KEI+KWLDAGII+PI++++WVSP+QCVP KGG+TV+ N+ NELIP+R V GWRI
Sbjct: 275 MKEVVKKEIIKWLDAGIIFPISDSAWVSPVQCVPKKGGMTVIKNEKNELIPSRTVTGWRI 334

Query: 61  CMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTC 120
           CMDYR+LNKATRKDHFPLPFIDQMLDRLA +  YCFLDGYSGYNQI I+PEDQ+KTTFTC
Sbjct: 335 CMDYRKLNKATRKDHFPLPFIDQMLDRLACQEFYCFLDGYSGYNQIAIAPEDQDKTTFTC 394

Query: 121 PYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGK 180
           P+G F FRRMPFGLCNAPA FQRCMM +FTDMVE  +EIF DDFSV+G++++TCL  L K
Sbjct: 395 PFGTFAFRRMPFGLCNAPATFQRCMMAIFTDMVECGLEIFMDDFSVFGDTYDTCLQILAK 454

Query: 181 VLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRS 240
           VL+RCEE NLVLNW+K HFMV E IV GHK+S++G+EVDRAKIETIE+L PP  VKGIRS
Sbjct: 455 VLRRCEETNLVLNWEKCHFMVQEGIVLGHKVSKKGLEVDRAKIETIEKLPPPIFVKGIRS 514

Query: 241 FLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW 300
           FL HAGFYR+FIKDFSK+AK LC+LLE + KF F+ +C+ AF  LKT L T PI+  PDW
Sbjct: 515 FLGHAGFYRRFIKDFSKVAKPLCNLLEKDIKFDFNDECLKAFDDLKTRLVTAPIIVVPDW 574

Query: 301 NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEK 360
           N PFELMCDAS  AVGA+LGQ+K K+ H IYYASKTLN+AQ+NYTTTEKELLAVVFA EK
Sbjct: 575 NEPFELMCDASDFAVGAVLGQRKNKIFHSIYYASKTLNDAQLNYTTTEKELLAVVFAFEK 634

Query: 361 FRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHL 420
           FR+ L G KV V+TDH+A+K+L+ K  AKP LIRW+LLLQEF++EI D KG  N VADHL
Sbjct: 635 FRSYLIGTKVIVFTDHSALKYLIEKKEAKPRLIRWVLLLQEFDLEIRDRKGSENQVADHL 694

Query: 421 SRMENMEEKVNSKEIDDAFPNEQLLWINS 450
           SR+E   E  +   I++ FP+EQLL IN+
Sbjct: 695 SRLET--EVKDPTCINENFPDEQLLAINN 721

BLAST of CmoCh11G011390 vs. NCBI nr
Match: gi|848873847|ref|XP_012837475.1| (PREDICTED: uncharacterized protein LOC105958021 [Erythranthe guttata])

HSP 1 Score: 662.5 bits (1708), Expect = 5.3e-187
Identity = 317/449 (70.60%), Postives = 377/449 (83.96%), Query Frame = 1

Query: 1   MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRI 60
           M +VV+KEI+KWLDAGII+PI++++WVSP+QCVP KGG+TV+ N+ NELIP+R V GWRI
Sbjct: 467 MKDVVKKEIIKWLDAGIIFPISDSAWVSPVQCVPKKGGMTVIKNEKNELIPSRTVTGWRI 526

Query: 61  CMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTC 120
           CMDYR+LNKATRKDHFPLPFIDQMLDRLA +  YCFLDGYSGYNQI I+PEDQ+KTTFTC
Sbjct: 527 CMDYRKLNKATRKDHFPLPFIDQMLDRLACQEFYCFLDGYSGYNQIAIAPEDQDKTTFTC 586

Query: 121 PYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGK 180
           P+G F FRRMPFGLCNAPA FQRCMM +FTDMVE  +EIF DDFSV+G++++TCL  L K
Sbjct: 587 PFGTFAFRRMPFGLCNAPATFQRCMMAIFTDMVECGLEIFMDDFSVFGDTYDTCLQILAK 646

Query: 181 VLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRS 240
           VL+RCEE NLVLNW+K HFMV E IV GHK+S++G+EVDRAKIETIE+L PP SVKGIRS
Sbjct: 647 VLRRCEETNLVLNWEKCHFMVQEGIVLGHKVSKKGLEVDRAKIETIEKLPPPISVKGIRS 706

Query: 241 FLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW 300
           FL HAGFYR+FIKDFSK+AK LC+LLE + KF F+ +C+ AF  LKT L T PI+  PDW
Sbjct: 707 FLGHAGFYRRFIKDFSKVAKPLCNLLEKDIKFDFNDECLKAFDDLKTRLVTAPIIVVPDW 766

Query: 301 NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEK 360
           N PFELMCDAS  AVGA+LGQ+K K+ H IYYASKTLN+AQ+NYTTTEKELLAVVFA EK
Sbjct: 767 NEPFELMCDASDFAVGAVLGQRKNKIFHSIYYASKTLNDAQLNYTTTEKELLAVVFAFEK 826

Query: 361 FRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHL 420
           FR+ L G KV V+TDH+A+K+L+ K  AKP LIRW+LLLQEF++EI D KG  N VADHL
Sbjct: 827 FRSYLIGTKVIVFTDHSALKYLIEKKEAKPRLIRWVLLLQEFDLEIRDRKGSENQVADHL 886

Query: 421 SRMENMEEKVNSKEIDDAFPNEQLLWINS 450
           SR+E   E  +   I++ F +EQLL IN+
Sbjct: 887 SRLET--EVKDPICINENFSDEQLLVINN 913

BLAST of CmoCh11G011390 vs. NCBI nr
Match: gi|848881901|ref|XP_012841295.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105961608 [Erythranthe guttata])

HSP 1 Score: 658.7 bits (1698), Expect = 7.6e-186
Identity = 316/449 (70.38%), Postives = 375/449 (83.52%), Query Frame = 1

Query: 1   MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRI 60
           M EVV+KEI+KWLDAGII+PI++++WVS +QCVP  GG+TV+ N+ NELIP+R V GWRI
Sbjct: 467 MKEVVKKEIIKWLDAGIIFPISDSAWVSSVQCVPKXGGMTVIKNEKNELIPSRTVTGWRI 526

Query: 61  CMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTC 120
           CMDYR+LNKATRKDHFPLPFIDQMLDRLA +  YCFLDGYSGYNQI I+PEDQ+KTTFTC
Sbjct: 527 CMDYRKLNKATRKDHFPLPFIDQMLDRLACQEFYCFLDGYSGYNQIAIAPEDQDKTTFTC 586

Query: 121 PYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGK 180
           P+G F FR MPFGLCNAPA FQRCMM +FTDMVE  +EIF DDFSV+G++++TCL  L K
Sbjct: 587 PFGTFAFRSMPFGLCNAPATFQRCMMAIFTDMVECGLEIFMDDFSVFGDTYDTCLQILAK 646

Query: 181 VLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRS 240
           VL+RCEE NLVLNW+K HFMV E IV GHK+S++G+EVDRAKIETIE+L PP SVKGIRS
Sbjct: 647 VLRRCEETNLVLNWEKCHFMVQEGIVLGHKVSKKGLEVDRAKIETIEKLPPPISVKGIRS 706

Query: 241 FLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW 300
           FL HAGFYR+FIKDFSK+AK LC+LLE + KF F+ +C+ AF  LKT L T PI+  PDW
Sbjct: 707 FLGHAGFYRRFIKDFSKVAKPLCNLLEKDIKFDFNDECLKAFDDLKTRLVTAPIIVVPDW 766

Query: 301 NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEK 360
           N PFELMCDAS  AVGA+LGQ+K K+ H IYYASKTLN+AQ+NYTTTEKELLAVVFA EK
Sbjct: 767 NEPFELMCDASDFAVGAVLGQRKNKMFHSIYYASKTLNDAQLNYTTTEKELLAVVFAFEK 826

Query: 361 FRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHL 420
           FR+ L G KV V+TDH+A+K+L+ K  AKP LIRW+LLLQEF++EI D KG  N VADHL
Sbjct: 827 FRSYLIGTKVIVFTDHSALKYLIEKKEAKPRLIRWVLLLQEFDLEIRDCKGSENQVADHL 886

Query: 421 SRMENMEEKVNSKEIDDAFPNEQLLWINS 450
           SR+E   E  +   I++ FP+EQLL IN+
Sbjct: 887 SRLET--EVKDPICINENFPDEQLLAINN 913

BLAST of CmoCh11G011390 vs. NCBI nr
Match: gi|848864314|ref|XP_012832904.1| (PREDICTED: uncharacterized protein LOC105953771 [Erythranthe guttata])

HSP 1 Score: 658.7 bits (1698), Expect = 7.6e-186
Identity = 317/450 (70.44%), Postives = 377/450 (83.78%), Query Frame = 1

Query: 1   MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRI 60
           M +VV+KEI+KWLDAGII+PI++++WV P+QCVP KGG+TV+ N+ NELIP+R V GWRI
Sbjct: 467 MKDVVKKEIIKWLDAGIIFPISDSAWVCPVQCVPKKGGMTVIKNEKNELIPSRTVTGWRI 526

Query: 61  CMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTC 120
           CMDYR+LNKATRKDHFPLPFIDQMLDRLA +  YCFLDGYSGYNQI I+PEDQ+KTTFTC
Sbjct: 527 CMDYRKLNKATRKDHFPLPFIDQMLDRLACQEFYCFLDGYSGYNQIAIAPEDQDKTTFTC 586

Query: 121 PYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGK 180
           P+G F FRRMPFGLCNAPA FQRCMM +FTDMVE  +EIF DDFSV+G++++TCL  L K
Sbjct: 587 PFGTFAFRRMPFGLCNAPATFQRCMMAIFTDMVECGLEIFMDDFSVFGDTYDTCLQILAK 646

Query: 181 VLQRCEEKNLVL-NWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIR 240
           VL+RCEEKNLVL NW+K HFMV E IV GHK+S++G+EVDRAKIETIE+L PP SVKGIR
Sbjct: 647 VLRRCEEKNLVLINWEKCHFMVQEGIVLGHKVSKKGLEVDRAKIETIEKLPPPISVKGIR 706

Query: 241 SFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPD 300
           SFL HAGFYR+FIKDFSK+AK LC+LLE + KF F+ +C+ AF  LKT L   PI+  PD
Sbjct: 707 SFLGHAGFYRRFIKDFSKVAKPLCNLLEKDVKFDFNDECLKAFDDLKTRLVHAPIIVVPD 766

Query: 301 WNLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVE 360
           WN PFELMCDAS  AVGA+LGQ+K K+ H IYYASKTLN+AQ+NYTTTEKELLAVVFA E
Sbjct: 767 WNEPFELMCDASDFAVGAVLGQRKNKIFHSIYYASKTLNDAQLNYTTTEKELLAVVFAFE 826

Query: 361 KFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADH 420
           KFR+ L G KV V+TDH+A+K+L+ K  AKP LIRW+LLLQEF++EI D KG  N VADH
Sbjct: 827 KFRSYLIGTKVIVFTDHSALKYLIEKKEAKPRLIRWVLLLQEFDLEIRDRKGSENQVADH 886

Query: 421 LSRMENMEEKVNSKEIDDAFPNEQLLWINS 450
           LSR+E   E  +   I++ FP+EQLL IN+
Sbjct: 887 LSRLET--EVKDPICINENFPDEQLLVINN 914

BLAST of CmoCh11G011390 vs. NCBI nr
Match: gi|848851970|ref|XP_012838027.1| (PREDICTED: uncharacterized protein LOC105958568 [Erythranthe guttata])

HSP 1 Score: 657.1 bits (1694), Expect = 2.2e-185
Identity = 316/449 (70.38%), Postives = 376/449 (83.74%), Query Frame = 1

Query: 1   MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRI 60
           M EVV+KEI+KWLDAGII+PI++++ VSP+QCVP KGG+TV+ N+ NELIP+R V GWRI
Sbjct: 467 MKEVVKKEIIKWLDAGIIFPISDSASVSPVQCVPKKGGMTVIKNEINELIPSRTVTGWRI 526

Query: 61  CMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTC 120
           CMDYR+LNKATRKDHFPLPFIDQMLDRLA +  YCFLDGYSGYNQI I+PEDQ+KTTFTC
Sbjct: 527 CMDYRKLNKATRKDHFPLPFIDQMLDRLACQEFYCFLDGYSGYNQIAIAPEDQDKTTFTC 586

Query: 121 PYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGK 180
           P+G F FRRMPFGLCNAPA FQRCMM +FTDMVE  +EIF DDFSV+G++++TCL  L K
Sbjct: 587 PFGTFAFRRMPFGLCNAPATFQRCMMAIFTDMVECGLEIFMDDFSVFGDTYDTCLQILAK 646

Query: 181 VLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRS 240
           VL+RCEE NLVLNW+K HFMV E IV GHK+S++G+EVDRAKIETIE+L PP SVKGIRS
Sbjct: 647 VLRRCEETNLVLNWEKCHFMVQEGIVLGHKVSKKGLEVDRAKIETIEKLPPPISVKGIRS 706

Query: 241 FLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW 300
           FL HAGFYR+FIKDFSK+AK LC+LLE + KF F+ +C+ AF  LKT L T PI+  PDW
Sbjct: 707 FLGHAGFYRRFIKDFSKVAKPLCNLLEKDIKFDFNDECLKAFDDLKTRLVTAPIIVVPDW 766

Query: 301 NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEK 360
           N PFELMCDAS  AVGA+LGQ+K K+ H IYYASKTLN+AQ+NYTTTEKELLA+VFA EK
Sbjct: 767 NEPFELMCDASDFAVGAVLGQRKNKIFHSIYYASKTLNDAQLNYTTTEKELLAIVFAFEK 826

Query: 361 FRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHL 420
           FR+ L G KV V+TDH+A+K+L+ K  AKP LIRW+LLLQEF++EI D KG  N VADH 
Sbjct: 827 FRSYLIGTKVIVFTDHSALKYLIEKKEAKPRLIRWVLLLQEFDLEIRDCKGSENQVADHQ 886

Query: 421 SRMENMEEKVNSKEIDDAFPNEQLLWINS 450
           SR+E   E  +   I++ FP+EQLL IN+
Sbjct: 887 SRLET--EVKDPICINENFPDEQLLAINN 913

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
POL3_DROME1.4e-6735.40Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
POL5_DROME1.1e-6434.12Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
POL2_DROME3.4e-6133.33Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
POL4_DROME8.4e-6032.94Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste... [more]
YI31B_YEAST1.2e-5333.26Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Match NameE-valueIdentityDescription
A0A151QNZ0_CAJCA9.1e-17866.07Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment) OS=Cajanus ca... [more]
E2DN01_BETVU6.5e-17665.63Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1[more]
A0A151UCZ5_CAJCA2.7e-17465.11Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan GN=KK1_... [more]
A0A0D3A328_BRAOL1.5e-17265.20Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
Q2AA50_ASPOF1.3e-17165.26Retrotransposon gag protein OS=Asparagus officinalis GN=19.t00014 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ATMG00860.15.2e-1535.38ATMG00860.1 DNA/RNA polymerases superfamily protein[more]
Match NameE-valueIdentityDescription
gi|848912141|ref|XP_012854372.1|8.1e-18870.82PREDICTED: uncharacterized protein LOC105973875 [Erythranthe guttata][more]
gi|848873847|ref|XP_012837475.1|5.3e-18770.60PREDICTED: uncharacterized protein LOC105958021 [Erythranthe guttata][more]
gi|848881901|ref|XP_012841295.1|7.6e-18670.38PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105961608 [Erythranth... [more]
gi|848864314|ref|XP_012832904.1|7.6e-18670.44PREDICTED: uncharacterized protein LOC105953771 [Erythranthe guttata][more]
gi|848851970|ref|XP_012838027.1|2.2e-18570.38PREDICTED: uncharacterized protein LOC105958568 [Erythranthe guttata][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G011390.1CmoCh11G011390.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 55..201
score: 1.9
NoneNo IPR availableunknownCoilCoilcoord: 416..436
scor
NoneNo IPR availableGENE3DG3DSA:3.10.10.10coord: 3..145
score: 2.9
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 44..447
score: 2.4E
NoneNo IPR availablePANTHERPTHR24559:SF180SUBFAMILY NOT NAMEDcoord: 44..447
score: 2.4E
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 2..406
score: 2.11E

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None