CmoCh11G011380 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G011380
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	MRNA expressed from retrotransposon-like gene
Location	Cmo_Chr11 : 6425439 .. 6426071 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAATTATGTGAAGTTCCTGAAGAATTTACTCACTAATAGAAGGAAGTTTGAAGAATTTAAGGTAGTGTCATTAAATGAAGAGTGCAGTGCAATATTGAAGAACAAGATCCCACTAAAGAAGAAATATCCTAGATCGTTCACTATTCCTGTATCAATTGGAGGAAAGGAACTAGGAAGAACATTATGTGACTTGGGAGCAAGCATCAACTTAATGCCTCTATCTATTTACAAGGAGTTGGGGATTGGAGAGGCTAGATCGACTACAGTCACCTTACAACTAGCCGATAGGTCCATCACTTATCCTGAAGGAAAGATTAAGGACATCTTAATTCAAGTTGACAAATTCATATTTCCTGCAGATTTTATCATTTTAGATTATGAAGCCGATCATGATGTTCCAATTATTTTGGGGGGGGCATTTTTAAAGACCGAAAGAACACTAGTAGATGTCTACAAAGGAACCATCACGTTAAGAATGGGTGACCAAAAAGTTGAATTTAATATCAATGACAACATGAAATATCTAGTAGTGATAGAAGAATGCTCAGCCGTGTATGAATTGACAGAACAACCAGCGACCGAGGAATGGGATGATGAGGAAAGCGAGCAGGAAGAAGACAGCAGCTAA

mRNA sequence

ATGCCAAATTATGTGAAGTTCCTGAAGAATTTACTCACTAATAGAAGGAAGTTTGAAGAATTTAAGGTAGTGTCATTAAATGAAGAGTGCAGTGCAATATTGAAGAACAAGATCCCACTAAAGAAGAAATATCCTAGATCGTTCACTATTCCTGTATCAATTGGAGGAAAGGAACTAGGAAGAACATTATGTGACTTGGGAGCAAGCATCAACTTAATGCCTCTATCTATTTACAAGGAGTTGGGGATTGGAGAGGCTAGATCGACTACAGTCACCTTACAACTAGCCGATAGGTCCATCACTTATCCTGAAGGAAAGATTAAGGACATCTTAATTCAAGTTGACAAATTCATATTTCCTGCAGATTTTATCATTTTAGATTATGAAGCCGATCATGATGTTCCAATTATTTTGGGGGGGGCATTTTTAAAGACCGAAAGAACACTAGTAGATGTCTACAAAGGAACCATCACGTTAAGAATGGGTGACCAAAAAGTTGAATTTAATATCAATGACAACATGAAATATCTAGTAGTGATAGAAGAATGCTCAGCCGTGTATGAATTGACAGAACAACCAGCGACCGAGGAATGGGATGATGAGGAAAGCGAGCAGGAAGAAGACAGCAGCTAA

Coding sequence (CDS)

ATGCCAAATTATGTGAAGTTCCTGAAGAATTTACTCACTAATAGAAGGAAGTTTGAAGAATTTAAGGTAGTGTCATTAAATGAAGAGTGCAGTGCAATATTGAAGAACAAGATCCCACTAAAGAAGAAATATCCTAGATCGTTCACTATTCCTGTATCAATTGGAGGAAAGGAACTAGGAAGAACATTATGTGACTTGGGAGCAAGCATCAACTTAATGCCTCTATCTATTTACAAGGAGTTGGGGATTGGAGAGGCTAGATCGACTACAGTCACCTTACAACTAGCCGATAGGTCCATCACTTATCCTGAAGGAAAGATTAAGGACATCTTAATTCAAGTTGACAAATTCATATTTCCTGCAGATTTTATCATTTTAGATTATGAAGCCGATCATGATGTTCCAATTATTTTGGGGGGGGCATTTTTAAAGACCGAAAGAACACTAGTAGATGTCTACAAAGGAACCATCACGTTAAGAATGGGTGACCAAAAAGTTGAATTTAATATCAATGACAACATGAAATATCTAGTAGTGATAGAAGAATGCTCAGCCGTGTATGAATTGACAGAACAACCAGCGACCGAGGAATGGGATGATGAGGAAAGCGAGCAGGAAGAAGACAGCAGCTAA

Homology

[Close]

BLAST of CmoCh11G011380 vs. TrEMBL
Match: A0A0S3QWS7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G023800 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.0e-51
Identity = 100/183 (54.64%), Postives = 138/183 (75.41%), Query Frame = 1


Query: 1   MPNYVKFLKNLLTNRRKFEEFKVVSLNEECSAILKNKIPLKKKYPRSFTIPVSIGGKELG 60
           MP+Y KF+K+LL+ +RK ++ + + L EECSAI++ K+P K K P SF IP  IG   +G
Sbjct: 86  MPSYAKFMKDLLSKKRKLQDDETIMLTEECSAIIQQKLPPKLKDPGSFVIPCEIGNITVG 145

Query: 61  RTLCDLGASINLMPLSIYKELGIGEARSTTVTLQLADRSITYPEGKIKDILIQVDKFIFP 120
           + LCDLGASINLMPLSI+K LGIGE + T +TLQLADRS+TYP G ++D+L++VDKFIFP
Sbjct: 146 KALCDLGASINLMPLSIFKRLGIGEVKPTMITLQLADRSMTYPYGIVEDVLVKVDKFIFP 205

Query: 121 ADFIILDYEADHDVPIILGGAFLKTERTLVDVYKGTITLRMGDQKVEFNINDNMKYLVVI 180
            DF++LD E D  VPIILG  FL T R L+DV +G + LR+ ++KV F++ + +K+ +  
Sbjct: 206 TDFVVLDMEEDAKVPIILGRPFLATGRALIDVEQGQLMLRVANEKVTFSMTEAVKHKLDR 265

Query: 181 EEC 184
           E+C
Sbjct: 266 EDC 268

[Close]

BLAST of CmoCh11G011380 vs. TrEMBL
Match: U5CWW5_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s03373p00000010 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.4e-47
Identity = 103/189 (54.50%), Postives = 132/189 (69.84%), Query Frame = 1


Query: 1   MPNYVKFLKNLLTNRRKFEEFKVVSLNEECSAILKNKIPLKKKYPRSFTIPVSIGGKELG 60
           MP YVKFLK++LT +R+  EF+ V+L E CSA+LK+KIP K K P SFTIP+SIGG++  
Sbjct: 72  MPTYVKFLKDILTKKRRLGEFETVALTEGCSAMLKSKIPPKLKDPGSFTIPISIGGRD-- 131

Query: 61  RTLCDLGASINLMPLSIYKELGIGEARSTTVTLQLADRSITYPEGKIKDILIQVDKFIFP 120
                              +LGIGEAR TTVTLQLADRS+ +PEGKI+D+L+QVDKFIFP
Sbjct: 132 -------------------KLGIGEARPTTVTLQLADRSMAHPEGKIEDVLVQVDKFIFP 191

Query: 121 ADFIILDYEADHDVPIILGGAFLKTERTLVDVYKGTITLRMGDQKVEFNINDNMKYLVVI 180
           ADFIILDYE D +VPIILG  FL T RTL+DV KG +T+R  D++  F +   ++    I
Sbjct: 192 ADFIILDYEEDREVPIILGRPFLATGRTLIDVEKGELTMRAQDEQATFKVFHPIRAPDAI 239

Query: 181 EECSAVYEL 190
            EC A+ ++
Sbjct: 252 GECLAIGDM 239

[Close]

BLAST of CmoCh11G011380 vs. TrEMBL
Match: A0A151QTE7_CAJCA (Transposon Ty3-I Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_045544 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 9.9e-47
Identity = 92/186 (49.46%), Postives = 129/186 (69.35%), Query Frame = 1


Query: 1   MPNYVKFLKNLLTNRRKFEEFKVVSLNEECSAILKNKIPLKKKYPRSFTIPVSIGGKELG 60
           MP Y KF+K LLT +R+   + +V L   CSAI++  IP K + P SFTIPV+IG   +G
Sbjct: 478 MPTYAKFMKELLTKKRRLTNYGIVELEAGCSAIIQKSIPQKSRNPGSFTIPVTIGRLLVG 537

Query: 61  RTLCDLGASINLMPLSIYKELGIGEARSTTVTLQLADRSITYPEGKIKDILIQVDKFIFP 120
           + L DLGASINLMPLS+ + +   EAR T +TLQLADRS+ YP G ++D+L++VDKF FP
Sbjct: 538 KALLDLGASINLMPLSMMRRISDLEARPTRMTLQLADRSVKYPHGIVEDVLVKVDKFFFP 597

Query: 121 ADFIILDYEADHDVPIILGGAFLKTERTLVDVYKGTITLRMGDQKVEFNINDNMKYLVVI 180
            DF+++D E D +VP+ILG  F+KT + ++DV  G + +R+ D +V FN+ + MKY    
Sbjct: 598 VDFVVMDMEEDREVPLILGRPFMKTAKVIIDVDDGNLKVRVQDDEVNFNVFEAMKYPCEQ 657

Query: 181 EECSAV 187
           +EC  V
Sbjct: 658 DECMRV 663

[Close]

BLAST of CmoCh11G011380 vs. TrEMBL
Match: A0A151R7X5_CAJCA (Transposon Ty3-I Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_040083 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.7e-46
Identity = 92/186 (49.46%), Postives = 132/186 (70.97%), Query Frame = 1


Query: 1   MPNYVKFLKNLLTNRRKFEEFKVVSLNEECSAILKNKIPLKKKYPRSFTIPVSIGGKELG 60
           MP Y KF+K LL+ +R+F E + + L   CSAI++  +P K K P SFTIPV+IG   +G
Sbjct: 189 MPTYAKFMKELLSKKRRFIEEETIELEAGCSAIIQKSLPQKSKDPGSFTIPVTIGTLPVG 248

Query: 61  RTLCDLGASINLMPLSIYKELGIGEARSTTVTLQLADRSITYPEGKIKDILIQVDKFIFP 120
           + L DLGASINLMPLS+ + +G  EAR T +TLQLADRSI YP G ++D+L++VDKF+FP
Sbjct: 249 KALLDLGASINLMPLSMMRRIGDLEARPTRMTLQLADRSIKYPHGVVEDVLVKVDKFMFP 308

Query: 121 ADFIILDYEADHDVPIILGGAFLKTERTLVDVYKGTITLRMGDQKVEFNINDNMKYLVVI 180
            DF+++D E D +VP+ILG  F+KT + ++DV  G + +R+ D++V FN+ + M+Y    
Sbjct: 309 VDFVVMDMEEDIEVPLILGRPFMKTAKVIIDVDDGKLKVRVQDEEVNFNVFEAMQYPNDK 368

Query: 181 EECSAV 187
            +C  V
Sbjct: 369 NDCMRV 374

[Close]

BLAST of CmoCh11G011380 vs. TrEMBL
Match: A5AZ88_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037041 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-45
Identity = 91/171 (53.22%), Postives = 127/171 (74.27%), Query Frame = 1


Query: 16  RKFEEFKVVSLNEECSAILKNKIPLKKKYPRSFTIPVSIGGKELGRTLCDLGASINLMPL 75
           +K  + + V L EECSAIL+ ++P K K P SFTIP +IG  +  + LCDLG S+NLMPL
Sbjct: 322 KKLMDNEKVMLTEECSAILQRELPPKLKDPGSFTIPCTIGDFDFDKVLCDLGESVNLMPL 381

Query: 76  SIYKELGIGEARSTTVTLQLADRSITYPEGKIKDILIQVDKFIFPADFIILDYEADHDVP 135
           SI+++LG+GE + TTV LQLADRSI +P G I+D+L++VDKF+FP DFI+LD E D DVP
Sbjct: 382 SIFRKLGLGEVKLTTVCLQLADRSIKHPRGIIEDVLVKVDKFLFPIDFIVLDMEEDRDVP 441

Query: 136 IILGGAFLKTERTLVDVYKGTITLRMGDQKVEFNINDNMKYLVVIEECSAV 187
           +ILG  FL T RTL+D ++G + LR+ D++V FN+ + MK+   ++ C A+
Sbjct: 442 LILGRPFLATSRTLIDFHQGKLILRVQDEQVTFNVFEAMKFPSNVDACFAI 492

[Close]

BLAST of CmoCh11G011380 vs. NCBI nr
Match: gi|985447976|ref|XP_015385565.1| (PREDICTED: uncharacterized protein LOC107176917 [Citrus sinensis])

HSP 1 Score: 234.6 bits (597), Expect = 1.6e-58
Identity = 113/184 (61.41%), Postives = 147/184 (79.89%), Query Frame = 1


Query: 1   MPNYVKFLKNLLTNRRKFEEFKVVSLNEECSAILKNKIPLKKKYPRSFTIPVSIGGKELG 60
           MPNYVKFLK++L  +R+  EF+ V+L +E S +L++KIP K K P SFTIP SIG +  G
Sbjct: 1   MPNYVKFLKDILARKRRLGEFETVALTKESSHMLQSKIPTKLKDPGSFTIPCSIGTRYTG 60

Query: 61  RTLCDLGASINLMPLSIYKELGIGEARSTTVTLQLADRSITYPEGKIKDILIQVDKFIFP 120
           RTLCDLGASINLMPLS++K+LG+GE R TTVTLQLAD S  YP+GKI+D+L++VDKFIFP
Sbjct: 61  RTLCDLGASINLMPLSVFKQLGVGECRPTTVTLQLADISHAYPQGKIEDVLVKVDKFIFP 120

Query: 121 ADFIILDYEADHDVPIILGGAFLKTERTLVDVYKGTITLRMGDQKVEFNINDNMKYLVVI 180
            DFI+LD+EAD +VPIILG  FL T +TL+DV KG +T+R+ DQ+V FN+ + MK    +
Sbjct: 121 VDFIVLDFEADKEVPIILGRHFLATRKTLIDVQKGELTMRVNDQQVTFNVLEAMKNPDEL 180

Query: 181 EECS 185
           E+C+
Sbjct: 181 EDCN 184

[Close]

BLAST of CmoCh11G011380 vs. NCBI nr
Match: gi|985458307|ref|XP_015387792.1| (PREDICTED: uncharacterized protein LOC107177825 [Citrus sinensis])

HSP 1 Score: 230.3 bits (586), Expect = 3.0e-57
Identity = 112/184 (60.87%), Postives = 145/184 (78.80%), Query Frame = 1


Query: 1   MPNYVKFLKNLLTNRRKFEEFKVVSLNEECSAILKNKIPLKKKYPRSFTIPVSIGGKELG 60
           MPNYVKFLK++L  +R+  EF+ V+L +E S +L++KIP K K PRSFT P SIG +  G
Sbjct: 262 MPNYVKFLKDILARKRRLGEFETVALTQESSHMLQSKIPTKLKDPRSFTTPYSIGNRYAG 321

Query: 61  RTLCDLGASINLMPLSIYKELGIGEARSTTVTLQLADRSITYPEGKIKDILIQVDKFIFP 120
           R L DLGASINLMPLS++K+LG+GE R  TVTLQLADRS  YPEGKIKD+L++V+KFIFP
Sbjct: 322 RALYDLGASINLMPLSVFKQLGVGEYRPITVTLQLADRSHAYPEGKIKDVLVKVNKFIFP 381

Query: 121 ADFIILDYEADHDVPIILGGAFLKTERTLVDVYKGTITLRMGDQKVEFNINDNMKYLVVI 180
            DFI+LD+EAD +VPIILG  FL T +TL+DV KG +T+R+ DQ+V FN+ + M+    I
Sbjct: 382 VDFIVLDFEADKEVPIILGRPFLATGKTLIDVQKGELTMRVNDQQVTFNVLEAMRNPDEI 441

Query: 181 EECS 185
           E+C+
Sbjct: 442 EDCN 445

[Close]

BLAST of CmoCh11G011380 vs. NCBI nr
Match: gi|950999367|ref|XP_014506495.1| (PREDICTED: uncharacterized protein LOC106766267 [Vigna radiata var. radiata])

HSP 1 Score: 220.7 bits (561), Expect = 2.4e-54
Identity = 105/183 (57.38%), Postives = 140/183 (76.50%), Query Frame = 1


Query: 1   MPNYVKFLKNLLTNRRKFEEFKVVSLNEECSAILKNKIPLKKKYPRSFTIPVSIGGKELG 60
           MP+Y KF+K+LL+ +RK +E + + L EECSAI++ K+P K K PRSF IP  IG   +G
Sbjct: 511 MPSYAKFMKDLLSKKRKLQEDETIILTEECSAIIQQKLPPKLKDPRSFVIPCEIGNISVG 570

Query: 61  RTLCDLGASINLMPLSIYKELGIGEARSTTVTLQLADRSITYPEGKIKDILIQVDKFIFP 120
           + LCDLGASINLMPLSI+K LGIG+ + T +TLQLADRS+TYP G ++D+L++VDKFIFP
Sbjct: 571 KALCDLGASINLMPLSIFKRLGIGKVKPTMITLQLADRSMTYPYGIVEDVLVKVDKFIFP 630

Query: 121 ADFIILDYEADHDVPIILGGAFLKTERTLVDVYKGTITLRMGDQKVEFNINDNMKYLVVI 180
            DF++LD E D  VPIILG  FL T RTL+DV +G + LR+GD+KV F+IN+ + + +  
Sbjct: 631 TDFVVLDMEEDAKVPIILGRPFLATGRTLIDVEQGALMLRVGDEKVTFSINEAVTHKLDK 690

Query: 181 EEC 184
           E C
Sbjct: 691 EHC 693

[Close]

BLAST of CmoCh11G011380 vs. NCBI nr
Match: gi|985471192|ref|XP_015381180.1| (PREDICTED: uncharacterized protein LOC107174644 [Citrus sinensis])

HSP 1 Score: 218.8 bits (556), Expect = 9.1e-54
Identity = 107/184 (58.15%), Postives = 140/184 (76.09%), Query Frame = 1


Query: 1   MPNYVKFLKNLLTNRRKFEEFKVVSLNEECSAILKNKIPLKKKYPRSFTIPVSIGGKELG 60
           MPNYVKFLK++L  +R+  EFK+V+L +E S +L+++IP K K   SFTI  SIG +  G
Sbjct: 1   MPNYVKFLKDILARKRRLREFKIVALTQERSRMLQSRIPKKLKDLGSFTISYSIGTRYNG 60

Query: 61  RTLCDLGASINLMPLSIYKELGIGEARSTTVTLQLADRSITYPEGKIKDILIQVDKFIFP 120
           R LCDLGA+INLMPLS++K+LG+GE R T V LQL DR   YPEGKI+D+L++VDKFIFP
Sbjct: 61  RALCDLGANINLMPLSVFKQLGVGECRPTIVNLQLTDRFHAYPEGKIEDVLVKVDKFIFP 120

Query: 121 ADFIILDYEADHDVPIILGGAFLKTERTLVDVYKGTITLRMGDQKVEFNINDNMKYLVVI 180
            DFI+LD+EAD +VPI LG  FL T +TL+DV KG +T+R+ DQ+V FNI + MK     
Sbjct: 121 VDFIVLDFEADKEVPITLGRPFLATGKTLIDVQKGELTMRVNDQQVTFNILEAMKNPDEA 180

Query: 181 EECS 185
           E+C+
Sbjct: 181 EDCN 184

[Close]

BLAST of CmoCh11G011380 vs. NCBI nr
Match: gi|951017537|ref|XP_014511445.1| (PREDICTED: uncharacterized protein LOC106770135 [Vigna radiata var. radiata])

HSP 1 Score: 218.4 bits (555), Expect = 1.2e-53
Identity = 103/183 (56.28%), Postives = 140/183 (76.50%), Query Frame = 1


Query: 1   MPNYVKFLKNLLTNRRKFEEFKVVSLNEECSAILKNKIPLKKKYPRSFTIPVSIGGKELG 60
           MP+Y KF+K+LL+ +RK +E + + L +ECSAI++ K+P K K PRSF IP  IG   +G
Sbjct: 46  MPSYAKFMKDLLSKKRKLQEDETIMLTQECSAIIQQKLPPKLKDPRSFVIPCEIGNITVG 105

Query: 61  RTLCDLGASINLMPLSIYKELGIGEARSTTVTLQLADRSITYPEGKIKDILIQVDKFIFP 120
           + LCDLGASINLMPLSI+K LGIGE + T +TLQL DRS+TYP G ++D+L++VDKFIFP
Sbjct: 106 KALCDLGASINLMPLSIFKRLGIGEVKPTMITLQLGDRSMTYPYGIVEDVLVKVDKFIFP 165

Query: 121 ADFIILDYEADHDVPIILGGAFLKTERTLVDVYKGTITLRMGDQKVEFNINDNMKYLVVI 180
           ADF++LD E D  VPIILG  FL T R L+DV +G + LR+ D+KV F++N+ +K+ +  
Sbjct: 166 ADFVVLDMEEDAKVPIILGRPFLATGRALIDVEQGQLMLRVADEKVTFSMNEAVKHKLDK 225

Query: 181 EEC 184
           E+C
Sbjct: 226 EDC 228

The following BLAST results are available for this feature:

BLAST of CmoCh11G011380 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh11G011380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S3QWS7_PHAAN	1.0e-51	54.64	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G023800 PE=...	[more]
U5CWW5_AMBTC	3.4e-47	54.50	Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s03373p00000010 PE=4 SV=...	[more]
A0A151QTE7_CAJCA	9.9e-47	49.46	Transposon Ty3-I Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_045544 PE=4 SV=1	[more]
A0A151R7X5_CAJCA	3.7e-46	49.46	Transposon Ty3-I Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_040083 PE=4 SV=1	[more]
A5AZ88_VITVI	1.4e-45	53.22	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037041 PE=4 SV=1	[more]

BLAST of CmoCh11G011380 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh11G011380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|985447976\|ref\|XP_015385565.1\|	1.6e-58	61.41	PREDICTED: uncharacterized protein LOC107176917 [Citrus sinensis]	[more]
gi\|985458307\|ref\|XP_015387792.1\|	3.0e-57	60.87	PREDICTED: uncharacterized protein LOC107177825 [Citrus sinensis]	[more]
gi\|950999367\|ref\|XP_014506495.1\|	2.4e-54	57.38	PREDICTED: uncharacterized protein LOC106766267 [Vigna radiata var. radiata]	[more]
gi\|985471192\|ref\|XP_015381180.1\|	9.1e-54	58.15	PREDICTED: uncharacterized protein LOC107174644 [Citrus sinensis]	[more]
gi\|951017537\|ref\|XP_014511445.1\|	1.2e-53	56.28	PREDICTED: uncharacterized protein LOC106770135 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G011380.1	CmoCh11G011380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33067	FAMILY NOT NAMED	coord: 1..154 score: 1.2
None	No IPR available	PANTHER	PTHR33067:SF2	SUBFAMILY NOT NAMED	coord: 1..154 score: 1.2
None	No IPR available	PFAM	PF13650	Asp_protease_2	coord: 50..141 score: 8.

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G011380	Wax gourd	cmowgoB0155
CmoCh11G011380	Cucumber (Gy14) v1	cgycmoB0673
CmoCh11G011380	Cucurbita maxima (Rimu)	cmacmoB112
CmoCh11G011380	Wild cucumber (PI 183967)	cmocpiB092
CmoCh11G011380	Cucumber (Chinese Long) v2	cmocuB087
CmoCh11G011380	Melon (DHL92) v3.5.1	cmomeB110
CmoCh11G011380	Watermelon (Charleston Gray)	cmowcgB097
CmoCh11G011380	Watermelon (97103) v1	cmowmB083
CmoCh11G011380	Cucurbita pepo (Zucchini)	cmocpeB127
CmoCh11G011380	Bottle gourd (USVL1VR-Ls)	cmolsiB130
CmoCh11G011380	Cucumber (Gy14) v2	cgybcmoB039
CmoCh11G011380	Melon (DHL92) v3.6.1	cmomedB118
CmoCh11G011380	Cucumber (Chinese Long) v3	cmocucB0102
CmoCh11G011380	Watermelon (97103) v2	cmowmbB096