CmoCh11G010460 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G010460
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Gibberellin-regulated protein
Location	Cmo_Chr11 : 5816242 .. 5817492 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGACCCGAGAAGAGATCGCGAACTCCAATTCCCCATTACCTCTTAATCTTCTTCTTCTTCTTCTCTTTCACCTGGCGATGGCGATGGCGATGGCTAAGTTCGCTGCTATCTTGATCTTGTCTCTCATTGCCCTTTCCATGTTTGAGACCACTGTGAGACCCTCTGCACCTCTACCTTAATACTCTTCTTGACACAATGAGGAAACTGACTGTTTTTGTTCTCGTGCTTCGATCCGTTCTGCAGGTCATGGCCGGCAATGGACGTGGTGGTCGCAACAGGGTAAGTCTTTTCCTAGTCTAGTTTCCCTGTTTCTGGACATTGGGGTTCGGAATTCCATAATCTTGAATTCTTTTGTCGTTGCGGCATTTTCTCGAACACCTTGTATGCCTCTGCTCTTGTTTTGATCTGCTCTGTTCTTGGGCTTGAAAATGGGGTTTGGTATACTCTTAATCCACTCTTTAATCACTTATTTCCCATTGCGGCATTTCTTCGAACACCTTGTTGTTGTAGTACTCTTATTTTGATGTGCATTGTTGTTGGCTTGTTCAGAACCCATATGGACCAGGGAGCGTCAATATCTACCGTAAATACTCTCCTAATTCCAAATCCAAACAGTTTTTGAGTAATCTTTTATGGTTGACTCGCTTGAATTAGTGGATATGAAATGGGTTAAAAAATTGACAGAATGCCCAAGTCGGTGCGCCACTCGATGCGGGAGGACACAGTACCACAAACCATGCATGTTCTTTTGCCAAAAATGCTGCAGAAAGTGCTTGTGCGTGCCGCCGGGTTACTATGGAAACAAAGGCGTTTGCCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGGCCCAAATGCCCTTAGAAAACACAACCCATTTCCATTTCCATCTCTTTTGTGCTCTTGAAGAAAATTGGGATCTGTTGTGTTCATCTTCTTGAAAAAGAAGATGAAATATGTCACCCAATCGGGGGAGCTTCTTGGCTTCGGCTTATTCCTTTTATTATCAGCAATGAAACCTCTTGTTTCTGTTCAAATTTCAGTGTTTCCATGTGACGCTGTCATAATTAGTCAATACTCTGCCCTCAGCCTCTCGTGAATGGATGGGTGGATGGCACTGGCAAACGTTTTTTGACCCAATAATAATGGACGAACTACGATCAAATGGATTAAACAGTTAGAAAACGGTAGTACTAATTTGGTTTTAGGGATATGATTTGATTTAATTCAAATTGTTCACGTGGAG

mRNA sequence

AGAAGACCCGAGAAGAGATCGCGAACTCCAATTCCCCATTACCTCTTAATCTTCTTCTTCTTCTTCTCTTTCACCTGGCGATGGCGATGGCGATGGCTAAGTTCGCTGCTATCTTGATCTTGTCTCTCATTGCCCTTTCCATGTTTGAGACCACTGTCATGGCCGGCAATGGACGTGGTGGTCGCAACAGGAACCCATATGGACCAGGGAGCGTCAATATCTACCAATGCCCAAGTCGGTGCGCCACTCGATGCGGGAGGACACAGTACCACAAACCATGCATGTTCTTTTGCCAAAAATGCTGCAGAAAGTGCTTGTGCGTGCCGCCGGGTTACTATGGAAACAAAGGCGTTTGCCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGGCCCAAATGCCCTTAGAAAACACAACCCATTTCCATTTCCATCTCTTTTGTGCTCTTGAAGAAAATTGGGATCTGTTGTGTTCATCTTCTTGAAAAAGAAGATGAAATATGTCACCCAATCGGGGGAGCTTCTTGGCTTCGGCTTATTCCTTTTATTATCAGCAATGAAACCTCTTGTTTCTGTTCAAATTTCAGTGTTTCCATGTGACGCTGTCATAATTAGTCAATACTCTGCCCTCAGCCTCTCGTGAATGGATGGGTGGATGGCACTGGCAAACGTTTTTTGACCCAATAATAATGGACGAACTACGATCAAATGGATTAAACAGTTAGAAAACGGTAGTACTAATTTGGTTTTAGGGATATGATTTGATTTAATTCAAATTGTTCACGTGGAG

Coding sequence (CDS)

ATGGCGATGGCGATGGCTAAGTTCGCTGCTATCTTGATCTTGTCTCTCATTGCCCTTTCCATGTTTGAGACCACTGTCATGGCCGGCAATGGACGTGGTGGTCGCAACAGGAACCCATATGGACCAGGGAGCGTCAATATCTACCAATGCCCAAGTCGGTGCGCCACTCGATGCGGGAGGACACAGTACCACAAACCATGCATGTTCTTTTGCCAAAAATGCTGCAGAAAGTGCTTGTGCGTGCCGCCGGGTTACTATGGAAACAAAGGCGTTTGCCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGGCCCAAATGCCCTTAG

Homology

[Close]

BLAST of CmoCh11G010460 vs. Swiss-Prot
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-34
Identity = 68/106 (64.15%), Postives = 80/106 (75.47%), Query Frame = 1


Query: 5   MAK-FAAILILSLIALSMFETTVMAGNGRGGR-NRNPYGPGSVNIYQCPSRCATRCGRTQ 64
           MAK + AI +L+LI L M +T VMA +G   + ++  YGPGS+   QCPS C  RC +TQ
Sbjct: 1   MAKSYGAIFLLTLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQ 60

Query: 65  YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           YHK C+ FC KCCRKCLCVPPGYYGNK VC CYNNWKT+EGGPKCP
Sbjct: 61  YHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]

BLAST of CmoCh11G010460 vs. Swiss-Prot
Match: GASA6_ARATH (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.3e-31
Identity = 60/100 (60.00%), Postives = 70/100 (70.00%), Query Frame = 1


Query: 10  AILILSLIALSMFETTVMAGNGRGGR-NRNPYGPGSVNIYQCPSRCATRCGRTQYHKPCM 69
           A LI S + L++  T V     +    +   YGPGS+  YQC  +C  RC  T+YHKPCM
Sbjct: 2   AKLITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPCM 61

Query: 70  FFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           FFCQKCC KCLCVPPG YGNK VCPCYNNWKT++GGPKCP
Sbjct: 62  FFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of CmoCh11G010460 vs. Swiss-Prot
Match: GASAD_ARATH (Gibberellin-regulated protein 13 OS=Arabidopsis thaliana GN=GASA13 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.9e-26
Identity = 46/62 (74.19%), Postives = 49/62 (79.03%), Query Frame = 1


Query: 47  IYQCPSRCATRCGRTQYHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPK 106
           + +C  RC  RC  TQY KPC+FFC KCC KCLCVPPG YGNK VCPCYNNWKTK GGPK
Sbjct: 42  LLECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPK 101

Query: 107 CP 109
           CP
Sbjct: 102 CP 103

[Close]

BLAST of CmoCh11G010460 vs. Swiss-Prot
Match: GASA5_ARATH (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.6e-25
Identity = 54/99 (54.55%), Postives = 63/99 (63.64%), Query Frame = 1


Query: 10  AILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQYHKPCMF 69
           A+  L+L+ L      V A   RGG        G +   QC S+C+ RC  T + KPCMF
Sbjct: 9   ALFFLTLLFLLSVSNLVQAA--RGG--------GKLKPQQCNSKCSFRCSATSHKKPCMF 68

Query: 70  FCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           FC KCC+KCLCVPPG +GNK  CPCYNNWKTKEG PKCP
Sbjct: 69  FCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97

[Close]

BLAST of CmoCh11G010460 vs. Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-24
Identity = 55/112 (49.11%), Postives = 67/112 (59.82%), Query Frame = 1


Query: 5   MAKFAAILILSLIALSMFETTVMAGN------GRGGRNRNPYG--PGSVNIYQCPSRCAT 64
           MA   +I++  L+ + + +  V   N       +  RN   YG   G ++   C  +C  
Sbjct: 1   MAGKMSIVLFVLLVVFLTQNQVSRANIMRDEQQQQQRNNQLYGVSEGRLHPQDCQPKCTY 60

Query: 65  RCGRTQYHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           RC +T Y KPCMFFCQKCC KCLCVP G YGNK  CPCYNNWKTK GGPKCP
Sbjct: 61  RCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112

[Close]

BLAST of CmoCh11G010460 vs. TrEMBL
Match: A0A0A0LG20_CUCSA (Gip1-like protein OS=Cucumis sativus GN=Csa_3G826660 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.9e-50
Identity = 91/106 (85.85%), Postives = 98/106 (92.45%), Query Frame = 1


Query: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQ 62
           MAM KFAA+L+L+LIA+SM +T VMAG  RGGRNRNPYGPGSV  +QCP+RCATRCGRTQ
Sbjct: 1   MAMPKFAALLLLALIAISMLQTAVMAG--RGGRNRNPYGPGSVKAFQCPNRCATRCGRTQ 60

Query: 63  YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]

BLAST of CmoCh11G010460 vs. TrEMBL
Match: M5WT14_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013692mg PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.1e-45
Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1


Query: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGRN--RNPYGPGSVNIYQCPSRCATRCGR 62
           MAMAKF A L+L+L+A+SM +TTVMA NG GG +   N YGPGS+  YQCPS+C+ RCG+
Sbjct: 1   MAMAKFFAALMLALLAISMLQTTVMANNGHGGHHGGNNAYGPGSLKSYQCPSQCSRRCGQ 60

Query: 63  TQYHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           TQYHKPCMFFCQKCC+KCLCVPPGYYGNKGVCPCYNNWKT++GGPKCP
Sbjct: 61  TQYHKPCMFFCQKCCKKCLCVPPGYYGNKGVCPCYNNWKTQQGGPKCP 108

[Close]

BLAST of CmoCh11G010460 vs. TrEMBL
Match: B4UW77_ARAHY (Gibberellin-regulated protein OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.6e-45
Identity = 83/107 (77.57%), Postives = 92/107 (85.98%), Query Frame = 1


Query: 5   MAKFAAILILSLIALSMFETTVMAGNGRGGR---NRNPYGPGSVNIYQCPSRCATRCGRT 64
           MAKF A  IL+LIA+SM +T VMA NG+GG    N++ YGPGSV  YQCPS+C+ RCG+T
Sbjct: 1   MAKFFAAFILALIAISMLQTMVMAANGQGGHLYDNKSQYGPGSVKSYQCPSQCSRRCGKT 60

Query: 65  QYHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           QYHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 61  QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 107

[Close]

BLAST of CmoCh11G010460 vs. TrEMBL
Match: G7L0Z5_MEDTR (Gibberellin-regulated family protein OS=Medicago truncatula GN=MTR_7g010580 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.8e-44
Identity = 82/109 (75.23%), Postives = 94/109 (86.24%), Query Frame = 1


Query: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGR---NRNPYGPGSVNIYQCPSRCATRCG 62
           MAM KF A LIL+LIA+SM +T VMAGN +GG    N++ YGPGS+  YQCPS+C+ RCG
Sbjct: 1   MAMTKFFASLILALIAISMLQTLVMAGNDQGGHLYDNKSQYGPGSLKSYQCPSQCSRRCG 60

Query: 63  RTQYHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           +TQYHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKT++GGPKCP
Sbjct: 61  QTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTQQGGPKCP 109

[Close]

BLAST of CmoCh11G010460 vs. TrEMBL
Match: V7B1Y4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G041200g PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.0e-44
Identity = 83/109 (76.15%), Postives = 91/109 (83.49%), Query Frame = 1


Query: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGR---NRNPYGPGSVNIYQCPSRCATRCG 62
           MAMAKF A +IL+LIA+SM +T VMA NG G     N++ YG GSV  YQCPS+C+ RC 
Sbjct: 1   MAMAKFFAAMILALIAISMLQTVVMAANGHGDHLNDNKSKYGSGSVKSYQCPSQCSRRCS 60

Query: 63  RTQYHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           RTQYHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 61  RTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 109

[Close]

BLAST of CmoCh11G010460 vs. TAIR10
Match: AT5G15230.1 (AT5G15230.1 GAST1 protein homolog 4)

HSP 1 Score: 147.1 bits (370), Expect = 6.1e-36
Identity = 68/106 (64.15%), Postives = 80/106 (75.47%), Query Frame = 1


Query: 5   MAK-FAAILILSLIALSMFETTVMAGNGRGGR-NRNPYGPGSVNIYQCPSRCATRCGRTQ 64
           MAK + AI +L+LI L M +T VMA +G   + ++  YGPGS+   QCPS C  RC +TQ
Sbjct: 1   MAKSYGAIFLLTLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQ 60

Query: 65  YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           YHK C+ FC KCCRKCLCVPPGYYGNK VC CYNNWKT+EGGPKCP
Sbjct: 61  YHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]

BLAST of CmoCh11G010460 vs. TAIR10
Match: AT1G74670.1 (AT1G74670.1 Gibberellin-regulated family protein)

HSP 1 Score: 135.2 bits (339), Expect = 2.4e-32
Identity = 60/100 (60.00%), Postives = 70/100 (70.00%), Query Frame = 1


Query: 10  AILILSLIALSMFETTVMAGNGRGGR-NRNPYGPGSVNIYQCPSRCATRCGRTQYHKPCM 69
           A LI S + L++  T V     +    +   YGPGS+  YQC  +C  RC  T+YHKPCM
Sbjct: 2   AKLITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPCM 61

Query: 70  FFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           FFCQKCC KCLCVPPG YGNK VCPCYNNWKT++GGPKCP
Sbjct: 62  FFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of CmoCh11G010460 vs. TAIR10
Match: AT3G10185.1 (AT3G10185.1 Gibberellin-regulated family protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-27
Identity = 46/62 (74.19%), Postives = 49/62 (79.03%), Query Frame = 1


Query: 47  IYQCPSRCATRCGRTQYHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPK 106
           + +C  RC  RC  TQY KPC+FFC KCC KCLCVPPG YGNK VCPCYNNWKTK GGPK
Sbjct: 42  LLECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPK 101

Query: 107 CP 109
           CP
Sbjct: 102 CP 103

[Close]

BLAST of CmoCh11G010460 vs. TAIR10
Match: AT3G02885.1 (AT3G02885.1 GAST1 protein homolog 5)

HSP 1 Score: 115.2 bits (287), Expect = 2.6e-26
Identity = 54/99 (54.55%), Postives = 63/99 (63.64%), Query Frame = 1


Query: 10  AILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQYHKPCMF 69
           A+  L+L+ L      V A   RGG        G +   QC S+C+ RC  T + KPCMF
Sbjct: 9   ALFFLTLLFLLSVSNLVQAA--RGG--------GKLKPQQCNSKCSFRCSATSHKKPCMF 68

Query: 70  FCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           FC KCC+KCLCVPPG +GNK  CPCYNNWKTKEG PKCP
Sbjct: 69  FCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97

[Close]

BLAST of CmoCh11G010460 vs. TAIR10
Match: AT2G30810.1 (AT2G30810.1 Gibberellin-regulated family protein)

HSP 1 Score: 111.3 bits (277), Expect = 3.7e-25
Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 1


Query: 11  ILILSLIALSMFETTVMAGNGRGGRNRNPY-----GPGSVNIYQCPSRCATRCGRTQYHK 70
           ++++ +I+  +F T    G+    + + P      G GS+   +CP  C  RC  T + K
Sbjct: 4   LIVVFVISSLLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRK 63

Query: 71  PCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           PC+FFC KCC KCLCVP G YG+K  CPCYNNW TKEGGPKCP
Sbjct: 64  PCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106

[Close]

BLAST of CmoCh11G010460 vs. NCBI nr
Match: gi|449459476|ref|XP_004147472.1| (PREDICTED: gibberellin-regulated protein 4 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 4.1e-50
Identity = 91/106 (85.85%), Postives = 98/106 (92.45%), Query Frame = 1


Query: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQ 62
           MAM KFAA+L+L+LIA+SM +T VMAG  RGGRNRNPYGPGSV  +QCP+RCATRCGRTQ
Sbjct: 1   MAMPKFAALLLLALIAISMLQTAVMAG--RGGRNRNPYGPGSVKAFQCPNRCATRCGRTQ 60

Query: 63  YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]

BLAST of CmoCh11G010460 vs. NCBI nr
Match: gi|595929570|ref|XP_007215172.1| (hypothetical protein PRUPE_ppa013692mg [Prunus persica])

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-45
Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1


Query: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGRN--RNPYGPGSVNIYQCPSRCATRCGR 62
           MAMAKF A L+L+L+A+SM +TTVMA NG GG +   N YGPGS+  YQCPS+C+ RCG+
Sbjct: 1   MAMAKFFAALMLALLAISMLQTTVMANNGHGGHHGGNNAYGPGSLKSYQCPSQCSRRCGQ 60

Query: 63  TQYHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           TQYHKPCMFFCQKCC+KCLCVPPGYYGNKGVCPCYNNWKT++GGPKCP
Sbjct: 61  TQYHKPCMFFCQKCCKKCLCVPPGYYGNKGVCPCYNNWKTQQGGPKCP 108

[Close]

BLAST of CmoCh11G010460 vs. NCBI nr
Match: gi|1021502147|ref|XP_016194279.1| (PREDICTED: gibberellin-regulated protein 4-like [Arachis ipaensis])

HSP 1 Score: 188.7 bits (478), Expect = 5.2e-45
Identity = 83/107 (77.57%), Postives = 92/107 (85.98%), Query Frame = 1


Query: 5   MAKFAAILILSLIALSMFETTVMAGNGRGGR---NRNPYGPGSVNIYQCPSRCATRCGRT 64
           MAKF A  IL+LIA+SM +T VMA NG+GG    N++ YGPGSV  YQCPS+C+ RCG+T
Sbjct: 1   MAKFFAAFILALIAISMLQTMVMAANGQGGHLYDNKSQYGPGSVKSYQCPSQCSRRCGKT 60

Query: 65  QYHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           QYHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 61  QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 107

[Close]

BLAST of CmoCh11G010460 vs. NCBI nr
Match: gi|645249472|ref|XP_008230767.1| (PREDICTED: gibberellin-regulated protein 6-like [Prunus mume])

HSP 1 Score: 186.8 bits (473), Expect = 2.0e-44
Identity = 81/108 (75.00%), Postives = 93/108 (86.11%), Query Frame = 1


Query: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGRN--RNPYGPGSVNIYQCPSRCATRCGR 62
           MAMAKF A LIL+L+A+SM +TTVMA NG GG +   N YGPGS+  YQCPS+C+ RCG+
Sbjct: 1   MAMAKFFAALILALLAISMLQTTVMANNGHGGHHGGNNAYGPGSLKSYQCPSQCSRRCGQ 60

Query: 63  TQYHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           TQYHKPCMFFCQKCC+KCLCVPPGYYGNK  CPCYNNWKT++GGPKCP
Sbjct: 61  TQYHKPCMFFCQKCCKKCLCVPPGYYGNKAACPCYNNWKTQQGGPKCP 108

[Close]

BLAST of CmoCh11G010460 vs. NCBI nr
Match: gi|743878837|ref|XP_011035751.1| (PREDICTED: gibberellin-regulated protein 4 [Populus euphratica])

HSP 1 Score: 186.8 bits (473), Expect = 2.0e-44
Identity = 80/106 (75.47%), Postives = 92/106 (86.79%), Query Frame = 1


Query: 5   MAKFAAILILSLIALSMFETTVMAGNGRGG--RNRNPYGPGSVNIYQCPSRCATRCGRTQ 64
           MAKF A+ +L+LIA+SM +T V+A +GRGG  RN+N YGPGS+  +QCPS+C  RC +TQ
Sbjct: 1   MAKFVAVFLLALIAISMLQTLVVASHGRGGHHRNKNKYGPGSLKSFQCPSQCTRRCSQTQ 60

Query: 65  YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 109
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 106

The following BLAST results are available for this feature:

BLAST of CmoCh11G010460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GASA4_ARATH	1.1e-34	64.15	Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2	[more]
GASA6_ARATH	4.3e-31	60.00	Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6 PE=3 SV=1	[more]
GASAD_ARATH	1.9e-26	74.19	Gibberellin-regulated protein 13 OS=Arabidopsis thaliana GN=GASA13 PE=3 SV=1	[more]
GASA5_ARATH	4.6e-25	54.55	Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5 PE=2 SV=1	[more]
GAST1_SOLLC	1.0e-24	49.11	Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1	[more]

BLAST of CmoCh11G010460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG20_CUCSA	2.9e-50	85.85	Gip1-like protein OS=Cucumis sativus GN=Csa_3G826660 PE=4 SV=1	[more]
M5WT14_PRUPE	2.1e-45	75.93	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013692mg PE=4 SV=1	[more]
B4UW77_ARAHY	3.6e-45	77.57	Gibberellin-regulated protein OS=Arachis hypogaea PE=2 SV=1	[more]
G7L0Z5_MEDTR	1.8e-44	75.23	Gibberellin-regulated family protein OS=Medicago truncatula GN=MTR_7g010580 PE=2...	[more]
V7B1Y4_PHAVU	4.0e-44	76.15	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G041200g PE=4 SV=1	[more]

BLAST of CmoCh11G010460 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G15230.1	6.1e-36	64.15	GAST1 protein homolog 4	[more]
AT1G74670.1	2.4e-32	60.00	Gibberellin-regulated family protein	[more]
AT3G10185.1	1.0e-27	74.19	Gibberellin-regulated family protein	[more]
AT3G02885.1	2.6e-26	54.55	GAST1 protein homolog 5	[more]
AT2G30810.1	3.7e-25	47.57	Gibberellin-regulated family protein	[more]

BLAST of CmoCh11G010460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459476\|ref\|XP_004147472.1\|	4.1e-50	85.85	PREDICTED: gibberellin-regulated protein 4 [Cucumis sativus]	[more]
gi\|595929570\|ref\|XP_007215172.1\|	3.1e-45	75.93	hypothetical protein PRUPE_ppa013692mg [Prunus persica]	[more]
gi\|1021502147\|ref\|XP_016194279.1\|	5.2e-45	77.57	PREDICTED: gibberellin-regulated protein 4-like [Arachis ipaensis]	[more]
gi\|645249472\|ref\|XP_008230767.1\|	2.0e-44	75.00	PREDICTED: gibberellin-regulated protein 6-like [Prunus mume]	[more]
gi\|743878837\|ref\|XP_011035751.1\|	2.0e-44	75.47	PREDICTED: gibberellin-regulated protein 4 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003854	GASA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0009739	response to gibberellin
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005623	cell
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G010460.1	CmoCh11G010460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 49..108 score: 4.1
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 3..108 score: 1.0
None	No IPR available	PANTHER	PTHR23201:SF21	GIBBERELLIN-REGULATED PROTEIN 4	coord: 3..108 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G010460	Cucsa.338940	Cucumber (Gy14) v1	cgycmoB0922
CmoCh11G010460	CmaCh11G010260	Cucurbita maxima (Rimu)	cmacmoB112
CmoCh11G010460	CmaCh14G005920	Cucurbita maxima (Rimu)	cmacmoB242
CmoCh11G010460	Cla017010	Watermelon (97103) v1	cmowmB080
CmoCh11G010460	Csa3G826660	Cucumber (Chinese Long) v2	cmocuB111
CmoCh11G010460	MELO3C009872	Melon (DHL92) v3.5.1	cmomeB119
CmoCh11G010460	CSPI03G39040	Wild cucumber (PI 183967)	cmocpiB113
CmoCh11G010460	MELO3C009872.2	Melon (DHL92) v3.6.1	cmomedB128
CmoCh11G010460	CsaV3_3G041480	Cucumber (Chinese Long) v3	cmocucB0127
CmoCh11G010460	Cla97C10G197900	Watermelon (97103) v2	cmowmbB084
CmoCh11G010460	CsGy3G036610	Cucumber (Gy14) v2	cgybcmoB265
CmoCh11G010460	Carg09785	Silver-seed gourd	carcmoB0591

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G010460	Cucurbita moschata (Rifu)	cmocmoB091
CmoCh11G010460	Cucumber (Gy14) v1	cgycmoB0436
CmoCh11G010460	Cucumber (Gy14) v1	cgycmoB0784
CmoCh11G010460	Wild cucumber (PI 183967)	cmocpiB125
CmoCh11G010460	Cucumber (Chinese Long) v2	cmocuB123
CmoCh11G010460	Cucumber (Chinese Long) v2	cmocuB124
CmoCh11G010460	Melon (DHL92) v3.5.1	cmomeB076
CmoCh11G010460	Watermelon (Charleston Gray)	cmowcgB070
CmoCh11G010460	Watermelon (Charleston Gray)	cmowcgB080
CmoCh11G010460	Watermelon (Charleston Gray)	cmowcgB111
CmoCh11G010460	Watermelon (97103) v1	cmowmB069
CmoCh11G010460	Watermelon (97103) v1	cmowmB101
CmoCh11G010460	Cucurbita pepo (Zucchini)	cmocpeB123
CmoCh11G010460	Cucurbita pepo (Zucchini)	cmocpeB127
CmoCh11G010460	Bottle gourd (USVL1VR-Ls)	cmolsiB107
CmoCh11G010460	Bottle gourd (USVL1VR-Ls)	cmolsiB095
CmoCh11G010460	Cucumber (Gy14) v2	cgybcmoB560
CmoCh11G010460	Melon (DHL92) v3.6.1	cmomedB080
CmoCh11G010460	Silver-seed gourd	carcmoB0297
CmoCh11G010460	Silver-seed gourd	carcmoB0358
CmoCh11G010460	Cucumber (Chinese Long) v3	cmocucB0142
CmoCh11G010460	Cucumber (Chinese Long) v3	cmocucB0143
CmoCh11G010460	Watermelon (97103) v2	cmowmbB134
CmoCh11G010460	Wax gourd	cmowgoB0088
CmoCh11G010460	Wax gourd	cmowgoB0094