CmoCh11G008820 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G008820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Genomic DNA, chrom
Location	Cmo_Chr11 : 4524628 .. 4528226 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACAATACCTCGTTCTCAGGTTTCGTGAATTAGAGAAGAAAGAACAGAATCAAGTGGGCTCGCAAACAAGAAATCCTCATATATCAATGTTCGGAAATGGCGGCAAAAACTTATCAAAAAGATGGAAGTCGACCACGTAACAATTTTGTTTAACGTATGATTCGATTTAGTTTTTTTTTTTTATTAAAAAAAAAATTACTTTTTTTAAAAAAAATATTTTCAATTTTTTAAATTTTTAATAGACTAATATATATATATATATATATTTTAATCATAAAATTTCAAAATAGGGAGAAGGCGCCATCTTCTTTACGCAGAGTTCAGTTCCATTGTCGAGAAGATCACAGGTCCCTCCGCTTTCTATACATCATTCGAGTAAATCGCGCGTAGTTTTCTTTTAACAATTGCCATTCATTTCCCCTTTCTTTCTCGTTTGTTGTGTTCGGGCTTTGATTATGATGTTTATGCTGGAGTTTCAATCAGGCATCATTGAATTTTGAGTTTCTCGGTTAATCTCGTTTCTATTATTATTGGTGTCGGTATTTCTTGGTGGAATTTCGTTTTGGTTTATAGCTTTCCTAGTTCGTAGAAGGAGTTTTATGTGATTATACTGCTTGCTAGGGTTTTAAGTAGAGGTTTTCCTTGAGAATTTGTGGTATATTTTAGTGTTGTACTAGTTTCAAGGAAGTTCATTTTAACTAATTTCATTACTTCGGTTGATTATCTTTGAATTTTGTTTAAAAAAGAAATGATATGGAATGAATTTAAGGTGAACTATCGTGAAGTATTCTGCGGTTGGGAGGAGAACGAAGCATTTTTTTATAAGAGTGTGGAAACCTCTCCCTAGTAGAAGTGTTGTAAAAACCTTGAAGGGAAACCCGAAAGTGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGGCTTGAGCATTTACAAATGGTATCAGAGCCAAACACTGGGCGGTGTGTCAGCGAGGAGATTAAGCCCTCATGGAGTGGACACGAGGCGGTGTGCCAGTAAGGACGTTGGGCCCGGGAGTGGATTGGGGGGTCCCACATCGATTGGAGAAAGGGAGCGAGTGCCAGCGTCCACGCTAGCTCTGAAAGGAGTGGCTTCGGAGCTGGATTGTGAGATCCCACATCGGTTGGGGCGAGAATGAAGCATTCTTTATAAGGGTGTGGAAACCTCTTCCTTGTAGACGTGTTTAAAAATCTTGAGGGGAAAGCCAAAGAGGACAATATCTACTAGCAGTGGGCTTGGACCGATCTAAGGACCAAAGGGTTTGAATGACCCTCCGAGAGCTTTTTCCTAACTGGTGTTGTAAACAATTAGGACACAGGAAAAATGCTTTGGTTTACCACTTGCCCTACTCTGCATATTACACATTAATTCCACGCTACTTAATTTCTATTCTTATAACGAATATGAAGGTGCAATTTATGCTTAATGTATACATTTATATTATTCCCCATGTGCTTAGTTTTAAGATTTTTTTTTATTATTATTATTGACTTCAGATTATTAAACTGCACAATCACCATCCAAGCCACTATTCATCGAAGAGAATATAATAACAAGAATGACAAGTCGTGTTACCCCAGGACGGCTGATTATCCCAAATGAAAACTTGGGCATGACTCAAAAGAGTAAGTCTCCACATTGCATGATAGCCATTAGTTTTGGCTAAAATCTGTTTGGCCAATGAGCATCGTCAAGCTGGTCAGTGGAGATCTAGTGTGAAAAGATTCTGTAAACCATGGCTTGAAGTTTCATGTTCATGCATTTCTCATATAACATAGAACATCATTTAGCAGTTCATCCTGTAGTATTCTCTATTATGTTCTTTGTTAAGTTCTATACATTTTCTACAGAATTTTCTGCTGATGGAAATGGAAAAAGCTCAAAGATAATTCACAAGAAAGGGATAGCAGGGTCAGGGCGTAAAGCTCTAAATGACATTACAAACAAATCATCCTGTCGCCAGGACGCTCCATTGAGGAAGCAAGAAAGAGCAAAGGAAGAAATTGATGTAGGTGGTGAAAGATTTTTGCATGATCATGATAAATGCGTTGATGCACGAAAAGCCACTATGTCTGCCTTTTACTTGGATCTTCTTCTTCCTGGACATGGTAAGCTGTTGAATGTCGAGGATAAAATTGCTTTCAATTTGATAATAACTAAGTCTGCTAACGATTACTGCTTTTGTGAAATCTTCTGTGATTACTTTTATTACTATGTTCATTAAGAAAGTCCTGAATGGTAAATCTCCAGTCATTTATCATTTTACCGTCATCTTTACATGAGATTTAAAGCCCATATTTTCATATGCAGACTCATTGTCCAAAGTTGGATGTCATACGTCCGATCAAGCAAAGGTAATTCTTCTTAAACTACTTTCAATTTATTATTCTCTACTTATTTTTTTTATTCTTTGTCCTGTTGTTACCATAAAAAATGACATACGTATTCATCACTATATTTTGACTCAATACCTATAGGAGGAAATTGTAAAATTCAAACGTGTTTTAGTCATAAATTCCAAGTTACTTAGAATACTAATGTGTTGGGATTTTCTTGAATCTAAATACTATGGTTTGAGGAGATGATCTAAGGTAGATGTGTGTAGGCTGAGAGAATTCATGGGTTATATAAAGACAATGATATCGATCAATTGATATAATATGATTTTTCTTGATGTGTTTCTTCTCTTCCTTTTAATTAAACATATACTTTTTTCTTGAGAAAAGTGTCTTAAACTCAAGAATATTCTCCTATTTTCACTCATTAAGAATGAAAGTATTGCCATTAGCTGGGAATATGAGAAGTTTTTAATTTTGATAAAATTGATAATACACAAATGAGTAGAAACTTGAAGTATATTTCTAGTCACTATGTTTCAATCTTTATGTCAATTTGTCCTTATACTTCAAAAAGTTTTGTTACTGTCCTCTTAATAATGTTTTTAATCCTGAGTCGTGAATCTCTTTATGCTATAGATTGATGTTGATGCCCCACAATGTTACCCTGACCCGGATGAATTGTTCATTCCTGAGCTTCCTAATTGGTCAAAATATCTGGCCAAACAACAATCACCCCCACGCTCCCCATTGCGTTGGGATTTTCCATCAACTTCATTTTCTTGCCAATTTGAGGAGCTGAACTTTGTGCTTACGCATGAATGATGAAACTATGAGAATTCGTACGAGGATTGAAGTTTTCTTATCTTCCCAGAAAGCATTCGTAAGAAAGCAATCAATTGATTCAAGTGATTCATCTATATGATTAGCGAGAAAGCTCTTCTCTTGCTTAGAATGGAGGAAATTCTGATTTTATGATGTTGATCAGTAGTACATTTTGTGGTTAATTGACAGCTGAGGGTCTTAATCAACATAACTTCACCAGCAATGTGCTTGAACTTGTAGTGTCCATTTGGCTAGTTGTATAGACTGACTTTTTTTTCTGCACCTATGCATCGATGAACTGTTTGTAGAAGCAAAGCAACACGACTCTTGCTTTGGAGACAAGCTTGTTAATTTTAGAAAGTGGATCTCTTTGAAAACTAATTGAATAGCTTTTAAACCCTTCCTCAAATGTGG

mRNA sequence

AAAACAATACCTCGTTCTCAGGTTTCGTGAATTAGAGAAGAAAGAACAGAATCAAGTGGGCTCGCAAACAAGAAATCCTCATATATCAATGTTCGGAAATGGCGGCAAAAACTTATCAAAAAGATGGAAGTCGACCACGTAACAATTTTGTTTAACGGAGAAGGCGCCATCTTCTTTACGCAGAGTTCAGTTCCATTGTCGAGAAGATCACAGATTATTAAACTGCACAATCACCATCCAAGCCACTATTCATCGAAGAGAATATAATAACAAGAATGACAAGTCGTGTTACCCCAGGACGGCTGATTATCCCAAATGAAAACTTGGGCATGACTCAAAAGAAATTTTCTGCTGATGGAAATGGAAAAAGCTCAAAGATAATTCACAAGAAAGGGATAGCAGGGTCAGGGCGTAAAGCTCTAAATGACATTACAAACAAATCATCCTGTCGCCAGGACGCTCCATTGAGGAAGCAAGAAAGAGCAAAGGAAGAAATTGATGTAGGTGGTGAAAGATTTTTGCATGATCATGATAAATGCGTTGATGCACGAAAAGCCACTATGTCTGCCTTTTACTTGGATCTTCTTCTTCCTGGACATGACTCATTGTCCAAAGTTGGATGTCATACGTCCGATCAAGCAAAGATTGATGTTGATGCCCCACAATGTTACCCTGACCCGGATGAATTGTTCATTCCTGAGCTTCCTAATTGGTCAAAATATCTGGCCAAACAACAATCACCCCCACGCTCCCCATTGCGTTGGGATTTTCCATCAACTTCATTTTCTTGCCAATTTGAGGAGCTGAACTTTGTGCTTACGCATGAATGATGAAACTATGAGAATTCGTACGAGGATTGAAGTTTTCTTATCTTCCCAGAAAGCATTCGTAAGAAAGCAATCAATTGATTCAAGTGATTCATCTATATGATTAGCGAGAAAGCTCTTCTCTTGCTTAGAATGGAGGAAATTCTGATTTTATGATGTTGATCAGTAGTACATTTTGTGGTTAATTGACAGCTGAGGGTCTTAATCAACATAACTTCACCAGCAATGTGCTTGAACTTGTAGTGTCCATTTGGCTAGTTGTATAGACTGACTTTTTTTTCTGCACCTATGCATCGATGAACTGTTTGTAGAAGCAAAGCAACACGACTCTTGCTTTGGAGACAAGCTTGTTAATTTTAGAAAGTGGATCTCTTTGAAAACTAATTGAATAGCTTTTAAACCCTTCCTCAAATGTGG

Coding sequence (CDS)

ATGACAAGTCGTGTTACCCCAGGACGGCTGATTATCCCAAATGAAAACTTGGGCATGACTCAAAAGAAATTTTCTGCTGATGGAAATGGAAAAAGCTCAAAGATAATTCACAAGAAAGGGATAGCAGGGTCAGGGCGTAAAGCTCTAAATGACATTACAAACAAATCATCCTGTCGCCAGGACGCTCCATTGAGGAAGCAAGAAAGAGCAAAGGAAGAAATTGATGTAGGTGGTGAAAGATTTTTGCATGATCATGATAAATGCGTTGATGCACGAAAAGCCACTATGTCTGCCTTTTACTTGGATCTTCTTCTTCCTGGACATGACTCATTGTCCAAAGTTGGATGTCATACGTCCGATCAAGCAAAGATTGATGTTGATGCCCCACAATGTTACCCTGACCCGGATGAATTGTTCATTCCTGAGCTTCCTAATTGGTCAAAATATCTGGCCAAACAACAATCACCCCCACGCTCCCCATTGCGTTGGGATTTTCCATCAACTTCATTTTCTTGCCAATTTGAGGAGCTGAACTTTGTGCTTACGCATGAATGA

Homology

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BLAST of CmoCh11G008820 vs. TrEMBL
Match: B9HNE9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s07630g PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.4e-34
Identity = 90/190 (47.37%), Postives = 120/190 (63.16%), Query Frame = 1


Query: 1   MTSRVTPGRLIIPNENLGMTQKKFSADGNGKSSKIIHKK--GIAGSGRKALNDITNKSSC 60
           M +RVT   LII +ENLG+++KK   DG+ K SK   KK  G A   RKALNDITNK+  
Sbjct: 1   MATRVTQTPLIIQDENLGVSRKKAGFDGSVKQSKTATKKSGGFALGNRKALNDITNKAVV 60

Query: 61  RQDAPLRKQERAKEEID-VGGERFLHDHDKCVDARKATMSAFYLDLLLPGHDSLSKVGCH 120
           RQ+   RK+   KEEI+ V  ERFLHDH+KC++ ++AT  + +LDL+LPGHDS+S     
Sbjct: 61  RQETSSRKKNVQKEEINNVAEERFLHDHNKCIEEKEATSISSFLDLVLPGHDSVSS---- 120

Query: 121 TSDQAKI-DVDAPQC-YPDPDELFIPELPNWSKYLAKQQSPPRSPLRWDFPSTS-FSCQF 180
           T++  ++   D   C YP+P EL IP   +W +   +  SPP SP+ WD P  S FS QF
Sbjct: 121 TAENPEVKQTDPGSCFYPEPKELAIPVFSDWFESPTQWHSPPCSPIHWDSPPCSPFSWQF 180

Query: 181 EELNFVLTHE 185
           E + +VL  E
Sbjct: 181 EAVEYVLRPE 186

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BLAST of CmoCh11G008820 vs. TrEMBL
Match: K7KB88_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G280600 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.1e-31
Identity = 83/186 (44.62%), Postives = 115/186 (61.83%), Query Frame = 1


Query: 1   MTSRVTPGRLIIPNENLGMTQKKFSADGNGKSSKIIHKKGIAGS-GRKALNDITNKSSCR 60
           M   V P  LII +ENL +  KK +     K+SK   KKG +G+ GRKALNDITNKSS  
Sbjct: 1   MAKFVAPSHLIIKDENLNLHSKKTT---KSKNSKTNGKKGGSGTAGRKALNDITNKSSLH 60

Query: 61  Q-DAPLRKQERAKEEIDVGGERFLHDHDKCVDARKATMSAFYLDLLLPGHDSLSKVGCHT 120
             +AP++K+   KE+I+V  E FLHDH KC++A+ A M +F L+ +LP  DS+S +    
Sbjct: 61  HPEAPVKKRNLPKEDINVKEEMFLHDHKKCIEAQNAAMRSFNLETVLPQDDSISIL---- 120

Query: 121 SDQAKIDVDAPQCYPDPDELFIPELPNWSKYLAKQQSPPRSPLRWDFPSTSFSCQFEELN 180
            +Q K+   +PQCYP+P EL + +  +W  +  +  SPP SPL WD P +  + Q EE+ 
Sbjct: 121 -EQIKVP-HSPQCYPEPVELPMSQFSDWFDHSMQWSSPPSSPLSWDSPPSPLAWQNEEVE 177

Query: 181 FVLTHE 185
           FVL  E
Sbjct: 181 FVLKEE 177

[Close]

BLAST of CmoCh11G008820 vs. TrEMBL
Match: A0A0B2S1V2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_004039 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.1e-31
Identity = 83/186 (44.62%), Postives = 115/186 (61.83%), Query Frame = 1


Query: 1   MTSRVTPGRLIIPNENLGMTQKKFSADGNGKSSKIIHKKGIAGS-GRKALNDITNKSSCR 60
           M   V P  LII +ENL +  KK +     K+SK   KKG +G+ GRKALNDITNKSS  
Sbjct: 1   MAKFVAPSHLIIKDENLNLHSKKTT---KSKNSKTNGKKGGSGTAGRKALNDITNKSSLH 60

Query: 61  Q-DAPLRKQERAKEEIDVGGERFLHDHDKCVDARKATMSAFYLDLLLPGHDSLSKVGCHT 120
             +AP++K+   KE+I+V  E FLHDH KC++A+ A M +F L+ +LP  DS+S +    
Sbjct: 61  HPEAPVKKRNLPKEDINVKEEMFLHDHKKCIEAQNAAMRSFNLETVLPQDDSISIL---- 120

Query: 121 SDQAKIDVDAPQCYPDPDELFIPELPNWSKYLAKQQSPPRSPLRWDFPSTSFSCQFEELN 180
            +Q K+   +PQCYP+P EL + +  +W  +  +  SPP SPL WD P +  + Q EE+ 
Sbjct: 121 -EQIKVP-HSPQCYPEPVELPMSQFSDWFDHSMQWSSPPSSPLSWDSPPSPLAWQNEEVE 177

Query: 181 FVLTHE 185
           FVL  E
Sbjct: 181 FVLKEE 177

[Close]

BLAST of CmoCh11G008820 vs. TrEMBL
Match: I3S1K7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.6e-31
Identity = 78/185 (42.16%), Postives = 117/185 (63.24%), Query Frame = 1


Query: 1   MTSRVTPGRLIIPNENLGMTQKKFSADGNGKSSKIIHKKGIAG-SGRKALNDITNKSSCR 60
           M   V PGRL+I ++NL +  KK   +   K+SK+  KKG  G SGRKALNDI+NK+S +
Sbjct: 1   MAKLVAPGRLMIKDDNLDIHPKKAGFNVKSKNSKLDGKKGGLGKSGRKALNDISNKTSRQ 60

Query: 61  QDAPLRKQERAKEEIDVGGERFLHDHDKCVDARKATMSAFYLDLLLPGHDSLSKVGCHTS 120
            +  ++K+   KE++++  E FLHDH KC++A+KA M+ F L+ +LP  DS S +     
Sbjct: 61  TETSVQKKNLPKEDVNIKEEMFLHDHKKCIEAQKAAMNNFNLETVLPQDDSFSIL----- 120

Query: 121 DQAKIDVDAPQCYPDPDELFIPELPNWSKYLAKQQSPPRSPLRWDFPSTSFSCQFEELNF 180
           +Q K+   + +CYP+P+EL + E  +W  Y  +  SPP SPL W+  S+ F+ Q E++ F
Sbjct: 121 EQIKVP-HSTRCYPEPEELPMSEFSDWLDYSMQWSSPPSSPLPWETLSSPFAWQHEDVEF 179

Query: 181 VLTHE 185
           VL  E
Sbjct: 181 VLKGE 179

[Close]

BLAST of CmoCh11G008820 vs. TrEMBL
Match: C6TMQ5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-29
Identity = 83/185 (44.86%), Postives = 112/185 (60.54%), Query Frame = 1


Query: 1   MTSRVTPGRLIIPNENLGMTQKKFSADGNGKSSKIIHKKGIAGSGRKALNDITNKSSCRQ 60
           M + V PG LII +ENL +  KK +   N K++      GIAG  RKALNDITNKSS   
Sbjct: 1   MANFVAPGHLIIKDENLNLHSKKTTKSKNSKTNGKKDGSGIAG--RKALNDITNKSSLHH 60

Query: 61  -DAPLRKQERAKEEIDVGGERFLHDHDKCVDARKATMSAFYLDLLLPGHDSLSKVGCHTS 120
            +A +RK+   K++I+V  E FLHDH KC++A+ ATM  F L+ +LP  DS+S +     
Sbjct: 61  PEASVRKRNLPKQDINVKEEMFLHDHKKCIEAQNATMRNFNLETVLPQDDSISIL----- 120

Query: 121 DQAKIDVDAPQCYPDPDELFIPELPNWSKYLAKQQSPPRSPLRWDFPSTSFSCQFEELNF 180
           +  K+   +PQCYP+P EL +P   +W  +  +  SPP SPL WD PS S + Q E + F
Sbjct: 121 ELIKVP-HSPQCYPEPVELPMPNFSDWFDHSMQWSSPPSSPLSWDSPS-SLAWQNEAVEF 176

Query: 181 VLTHE 185
           VL  E
Sbjct: 181 VLKEE 176

[Close]

BLAST of CmoCh11G008820 vs. TAIR10
Match: AT3G14190.1 (AT3G14190.1 unknown protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-19
Identity = 62/184 (33.70%), Postives = 90/184 (48.91%), Query Frame = 1


Query: 9   RLIIPNENLGMTQKKFSADGNGKSSKIIHKKGIAGSGRKALNDITNKSSCRQDAPLRKQE 68
           ++I P+EN  + +KK     + KS   +  +   G  RKALNDITNKS     A    + 
Sbjct: 9   QMIFPDENAPIHRKKSVTAASVKSKGTVLGQKKPGGARKALNDITNKSGIHAKAAASSKN 68

Query: 69  R-----AKEEIDVGGERFLHDHDKCVDARKATMSAFY-LDLLLPGHDSLSKVGCHTSDQA 128
           +     A +EID+ GERFLHDH KC+  ++      Y  DL+L  H S  K      D  
Sbjct: 69  KQIASAAVKEIDIAGERFLHDHSKCIKEQQNLWDDHYSADLMLLHHGSSIKEKHLNWDIE 128

Query: 129 KIDVDAPQCYPDPDELFIPELPNWSKYLAKQQSPPRSPLRWD--FPSTSFSCQFEELNFV 185
           K+D      Y +P+E+  P+  +W     K  +P RSP+R     PST  + +F+   F 
Sbjct: 129 KMDAKDDLTYEEPEEMASPKFSDW----LKNSTPWRSPIRHGSMMPSTPLAWRFDSCEFT 188

[Close]

BLAST of CmoCh11G008820 vs. TAIR10
Match: AT5G12360.1 (AT5G12360.1 unknown protein)

HSP 1 Score: 78.6 bits (192), Expect = 4.6e-15
Identity = 60/192 (31.25%), Postives = 96/192 (50.00%), Query Frame = 1


Query: 1   MTSRVTPGRLIIPNEN-LGMTQKKFSADGNGKSSKIIHKKGIAGSG-RKALNDITNKSSC 60
           M + +  G++I  +EN L    KK  A G GKSS    KK  AG G RKAL+DITNKS  
Sbjct: 1   MANTILRGQMIFQDENALAALGKKAVAAGKGKSSLAAPKKNGAGFGSRKALHDITNKSKL 60

Query: 61  R-QDAPLRKQERAKEEIDVGGERFLHDHDKCVDARKATM--SAFYLDLLLPGHDSLSKVG 120
           + Q +   +++    + D+  E FLHDH KC++ ++     S F   ++L GH++  K G
Sbjct: 61  QPQASSTTRKDVEGVDFDIAKEGFLHDHSKCIEEQQQDQWDSYFSEHIILHGHETNIKEG 120

Query: 121 CHTSDQAKIDVDAPQCYPDPDELFIPELPNWSKYLAKQQSP-----------PRSPLRWD 177
               +  + ++DA   + +  E+ + E  +  +   + +SP           P SPL W 
Sbjct: 121 VPQYNNIQ-EIDAENSWDELKEIPMEEFSDLLECSTQWRSPPDSLSHHHSSLPSSPLPWH 180

[Close]

BLAST of CmoCh11G008820 vs. NCBI nr
Match: gi|224103935|ref|XP_002313251.1| (hypothetical protein POPTR_0009s07630g [Populus trichocarpa])

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 90/190 (47.37%), Postives = 120/190 (63.16%), Query Frame = 1


Query: 1   MTSRVTPGRLIIPNENLGMTQKKFSADGNGKSSKIIHKK--GIAGSGRKALNDITNKSSC 60
           M +RVT   LII +ENLG+++KK   DG+ K SK   KK  G A   RKALNDITNK+  
Sbjct: 1   MATRVTQTPLIIQDENLGVSRKKAGFDGSVKQSKTATKKSGGFALGNRKALNDITNKAVV 60

Query: 61  RQDAPLRKQERAKEEID-VGGERFLHDHDKCVDARKATMSAFYLDLLLPGHDSLSKVGCH 120
           RQ+   RK+   KEEI+ V  ERFLHDH+KC++ ++AT  + +LDL+LPGHDS+S     
Sbjct: 61  RQETSSRKKNVQKEEINNVAEERFLHDHNKCIEEKEATSISSFLDLVLPGHDSVSS---- 120

Query: 121 TSDQAKI-DVDAPQC-YPDPDELFIPELPNWSKYLAKQQSPPRSPLRWDFPSTS-FSCQF 180
           T++  ++   D   C YP+P EL IP   +W +   +  SPP SP+ WD P  S FS QF
Sbjct: 121 TAENPEVKQTDPGSCFYPEPKELAIPVFSDWFESPTQWHSPPCSPIHWDSPPCSPFSWQF 180

Query: 181 EELNFVLTHE 185
           E + +VL  E
Sbjct: 181 EAVEYVLRPE 186

[Close]

BLAST of CmoCh11G008820 vs. NCBI nr
Match: gi|356501405|ref|XP_003519515.1| (PREDICTED: uncharacterized protein LOC100806971 [Glycine max])

HSP 1 Score: 142.5 bits (358), Expect = 7.3e-31
Identity = 83/186 (44.62%), Postives = 115/186 (61.83%), Query Frame = 1


Query: 1   MTSRVTPGRLIIPNENLGMTQKKFSADGNGKSSKIIHKKGIAGS-GRKALNDITNKSSCR 60
           M   V P  LII +ENL +  KK +     K+SK   KKG +G+ GRKALNDITNKSS  
Sbjct: 1   MAKFVAPSHLIIKDENLNLHSKKTT---KSKNSKTNGKKGGSGTAGRKALNDITNKSSLH 60

Query: 61  Q-DAPLRKQERAKEEIDVGGERFLHDHDKCVDARKATMSAFYLDLLLPGHDSLSKVGCHT 120
             +AP++K+   KE+I+V  E FLHDH KC++A+ A M +F L+ +LP  DS+S +    
Sbjct: 61  HPEAPVKKRNLPKEDINVKEEMFLHDHKKCIEAQNAAMRSFNLETVLPQDDSISIL---- 120

Query: 121 SDQAKIDVDAPQCYPDPDELFIPELPNWSKYLAKQQSPPRSPLRWDFPSTSFSCQFEELN 180
            +Q K+   +PQCYP+P EL + +  +W  +  +  SPP SPL WD P +  + Q EE+ 
Sbjct: 121 -EQIKVP-HSPQCYPEPVELPMSQFSDWFDHSMQWSSPPSSPLSWDSPPSPLAWQNEEVE 177

Query: 181 FVLTHE 185
           FVL  E
Sbjct: 181 FVLKEE 177

[Close]

BLAST of CmoCh11G008820 vs. NCBI nr
Match: gi|388492166|gb|AFK34149.1| (unknown [Lotus japonicus])

HSP 1 Score: 142.1 bits (357), Expect = 9.5e-31
Identity = 78/185 (42.16%), Postives = 117/185 (63.24%), Query Frame = 1


Query: 1   MTSRVTPGRLIIPNENLGMTQKKFSADGNGKSSKIIHKKGIAG-SGRKALNDITNKSSCR 60
           M   V PGRL+I ++NL +  KK   +   K+SK+  KKG  G SGRKALNDI+NK+S +
Sbjct: 1   MAKLVAPGRLMIKDDNLDIHPKKAGFNVKSKNSKLDGKKGGLGKSGRKALNDISNKTSRQ 60

Query: 61  QDAPLRKQERAKEEIDVGGERFLHDHDKCVDARKATMSAFYLDLLLPGHDSLSKVGCHTS 120
            +  ++K+   KE++++  E FLHDH KC++A+KA M+ F L+ +LP  DS S +     
Sbjct: 61  TETSVQKKNLPKEDVNIKEEMFLHDHKKCIEAQKAAMNNFNLETVLPQDDSFSIL----- 120

Query: 121 DQAKIDVDAPQCYPDPDELFIPELPNWSKYLAKQQSPPRSPLRWDFPSTSFSCQFEELNF 180
           +Q K+   + +CYP+P+EL + E  +W  Y  +  SPP SPL W+  S+ F+ Q E++ F
Sbjct: 121 EQIKVP-HSTRCYPEPEELPMSEFSDWLDYSMQWSSPPSSPLPWETLSSPFAWQHEDVEF 179

Query: 181 VLTHE 185
           VL  E
Sbjct: 181 VLKGE 179

[Close]

BLAST of CmoCh11G008820 vs. NCBI nr
Match: gi|743796085|ref|XP_011004044.1| (PREDICTED: uncharacterized protein LOC105110633 isoform X2 [Populus euphratica])

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-30
Identity = 85/188 (45.21%), Postives = 114/188 (60.64%), Query Frame = 1


Query: 1   MTSRVTPGRLIIPNENLGMTQKKFSADGNGKSSKIIHKK--GIAGSGRKALNDITNKSSC 60
           MT+RVT   LII +ENLG+++KK   DG  K SK   KK  G A   RKAL+DITNK+  
Sbjct: 1   MTTRVTQTPLIIQDENLGVSRKKVGFDGTVKKSKTATKKSGGFALGNRKALDDITNKAVV 60

Query: 61  RQDAPLRKQERAKEEID-VGGERFLHDHDKCVDARKATMSAFYLDLLLPGHDSLSKVGCH 120
           RQ+   RK+   KEEI+ V  ERFLHDH KC++ ++AT+ + +LDL+LPGHDS+S     
Sbjct: 61  RQETSSRKKNVQKEEINNVAEERFLHDHSKCIEEKEATLISSFLDLVLPGHDSVS--SSD 120

Query: 121 TSDQAKIDVDAPQCYPDPDELFIPELPNWSKYLAKQQSPPRSPLRWDFPSTS-FSCQFEE 180
            + + K      + YP+  EL IP   +  +   +  SPP SP+ WD P  S FS QFE 
Sbjct: 121 ENPEVKQTDPVSRFYPEQKELAIPVFSDLFESSTQWHSPPCSPIHWDSPPCSPFSWQFEA 180

Query: 181 LNFVLTHE 185
           + + L  E
Sbjct: 181 VEYELKPE 186

[Close]

BLAST of CmoCh11G008820 vs. NCBI nr
Match: gi|743796078|ref|XP_011004028.1| (PREDICTED: uncharacterized protein LOC105110633 isoform X1 [Populus euphratica])

HSP 1 Score: 141.0 bits (354), Expect = 2.1e-30
Identity = 87/189 (46.03%), Postives = 115/189 (60.85%), Query Frame = 1


Query: 1   MTSRVTPGRLIIPNENLGMTQKKFSADGNGKSSKIIHKK--GIAGSGRKALNDITNKSSC 60
           MT+RVT   LII +ENLG+++KK   DG  K SK   KK  G A   RKAL+DITNK+  
Sbjct: 1   MTTRVTQTPLIIQDENLGVSRKKVGFDGTVKKSKTATKKSGGFALGNRKALDDITNKAVV 60

Query: 61  RQDAPLRKQERAKEEID-VGGERFLHDHDKCVDARKATMSAFYLDLLLPGHDSLSKVGCH 120
           RQ+   RK+   KEEI+ V  ERFLHDH KC++ ++AT+ + +LDL+LPGHDS+S    +
Sbjct: 61  RQETSSRKKNVQKEEINNVAEERFLHDHSKCIEEKEATLISSFLDLVLPGHDSVSSSDEN 120

Query: 121 TS-DQAKIDVDAPQCYPDPDELFIPELPNWSKYLAKQQSPPRSPLRWDFPSTS-FSCQFE 180
               Q K D    + YP+  EL IP   +  +   +  SPP SP+ WD P  S FS QFE
Sbjct: 121 PEVKQVKTD-PVSRFYPEQKELAIPVFSDLFESSTQWHSPPCSPIHWDSPPCSPFSWQFE 180

Query: 181 ELNFVLTHE 185
            + + L  E
Sbjct: 181 AVEYELKPE 188

The following BLAST results are available for this feature:

BLAST of CmoCh11G008820 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh11G008820 vs. TrEMBL


Match Name	E-value	Identity	Description
B9HNE9_POPTR	8.4e-34	47.37	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s07630g PE=4 SV=1	[more]
K7KB88_SOYBN	5.1e-31	44.62	Uncharacterized protein OS=Glycine max GN=GLYMA_02G280600 PE=4 SV=1	[more]
A0A0B2S1V2_GLYSO	5.1e-31	44.62	Uncharacterized protein OS=Glycine soja GN=glysoja_004039 PE=4 SV=1	[more]
I3S1K7_LOTJA	6.6e-31	42.16	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
C6TMQ5_SOYBN	1.3e-29	44.86	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]

BLAST of CmoCh11G008820 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G14190.1	2.3e-19	33.70	unknown protein	[more]
AT5G12360.1	4.6e-15	31.25	unknown protein	[more]

BLAST of CmoCh11G008820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|224103935\|ref\|XP_002313251.1\|	1.2e-33	47.37	hypothetical protein POPTR_0009s07630g [Populus trichocarpa]	[more]
gi\|356501405\|ref\|XP_003519515.1\|	7.3e-31	44.62	PREDICTED: uncharacterized protein LOC100806971 [Glycine max]	[more]
gi\|388492166\|gb\|AFK34149.1\|	9.5e-31	42.16	unknown [Lotus japonicus]	[more]
gi\|743796085\|ref\|XP_011004044.1\|	1.6e-30	45.21	PREDICTED: uncharacterized protein LOC105110633 isoform X2 [Populus euphratica]	[more]
gi\|743796078\|ref\|XP_011004028.1\|	2.1e-30	46.03	PREDICTED: uncharacterized protein LOC105110633 isoform X1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0044699	single-organism process
biological_process	GO:0007346	regulation of mitotic cell cycle
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G008820.1	CmoCh11G008820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35125	FAMILY NOT NAMED	coord: 2..184 score: 5.8
None	No IPR available	PANTHER	PTHR35125:SF1	GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MAG2	coord: 2..184 score: 5.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G008820	CmaCh11G008740	Cucurbita maxima (Rimu)	cmacmoB112
CmoCh11G008820	Cp4.1LG04g12280	Cucurbita pepo (Zucchini)	cmocpeB129
CmoCh11G008820	Carg25422	Silver-seed gourd	carcmoB0575

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G008820	Watermelon (97103) v2	cmowmbB095
CmoCh11G008820	Watermelon (97103) v2	cmowmbB100
CmoCh11G008820	Wax gourd	cmowgoB0129
CmoCh11G008820	Wax gourd	cmowgoB0159
CmoCh11G008820	Cucurbita moschata (Rifu)	cmocmoB044
CmoCh11G008820	Cucurbita moschata (Rifu)	cmocmoB115
CmoCh11G008820	Cucurbita moschata (Rifu)	cmocmoB118
CmoCh11G008820	Melon (DHL92) v3.5.1	cmomeB097
CmoCh11G008820	Cucumber (Gy14) v1	cgycmoB0383
CmoCh11G008820	Cucurbita maxima (Rimu)	cmacmoB074
CmoCh11G008820	Cucurbita maxima (Rimu)	cmacmoB541
CmoCh11G008820	Cucurbita maxima (Rimu)	cmacmoB574
CmoCh11G008820	Wild cucumber (PI 183967)	cmocpiB078
CmoCh11G008820	Wild cucumber (PI 183967)	cmocpiB130
CmoCh11G008820	Cucumber (Chinese Long) v2	cmocuB075
CmoCh11G008820	Cucumber (Chinese Long) v2	cmocuB131
CmoCh11G008820	Melon (DHL92) v3.5.1	cmomeB123
CmoCh11G008820	Watermelon (Charleston Gray)	cmowcgB095
CmoCh11G008820	Watermelon (Charleston Gray)	cmowcgB101
CmoCh11G008820	Watermelon (97103) v1	cmowmB089
CmoCh11G008820	Watermelon (97103) v1	cmowmB118
CmoCh11G008820	Cucurbita pepo (Zucchini)	cmocpeB102
CmoCh11G008820	Cucurbita pepo (Zucchini)	cmocpeB104
CmoCh11G008820	Cucurbita pepo (Zucchini)	cmocpeB134
CmoCh11G008820	Bottle gourd (USVL1VR-Ls)	cmolsiB075
CmoCh11G008820	Bottle gourd (USVL1VR-Ls)	cmolsiB118
CmoCh11G008820	Cucumber (Gy14) v2	cgybcmoB027
CmoCh11G008820	Cucumber (Gy14) v2	cgybcmoB697
CmoCh11G008820	Melon (DHL92) v3.6.1	cmomedB104
CmoCh11G008820	Melon (DHL92) v3.6.1	cmomedB131
CmoCh11G008820	Silver-seed gourd	carcmoB0704
CmoCh11G008820	Silver-seed gourd	carcmoB1228
CmoCh11G008820	Cucumber (Chinese Long) v3	cmocucB0090
CmoCh11G008820	Cucumber (Chinese Long) v3	cmocucB0154