CmoCh11G008610 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGTGAAGAAATGGTTTCGTAAATTTTGTTTCCTTCTGTTTTTTTCTTTTATTGACTTCACCAAAACGTTTCCCAATTTTTTCTTCGCAACCAAACGCACTCACAGCGGCGAAGAACCCACGGGAACGCCTAATTTTTCCCCTTTTTCTTTTTGAATCGAATCGGGCTGTGAGATGAGGAAAACAGGAGGAACCGACAAGAAGAGGGTCAGAAGGCAATCAACTGCTGTTCAAAATGCTGCCAAAGATCCCAATTCCGATACTCCTCCTAGGGTTTGCCTTCGTTTTCCTTCTTACGTCTTCATTTTGCTCTCTAATTTTGTTTTCTGATCTGGGTTTTTGTTGCCTTAAAGAGGGAACCAATGATCGCTTCTGTATGATTCTTTGTTTGACGGCGCATCCTTGCCCCAAATGCGTCATTCTTTGATGTGATTTTGGACATGTTTTGTGAATTGTTCTTTTGGGTTCTTGTATTTTTGTGCTTTTGTGAGAAATGATTGGTGGATGTTAAGTTTGTGTTATTTGTCATTTGTGATTTTGAGTTCCTTAATGCTGAAATGTGTGGCGTGTGGCTGGAGGAACGATTGACTCTGGCACCCATTTGTGAGAACGTGCTTGCGAATATTCATTGTGCTTTCTTGTTCAAGAAAGAGAAAAGGAGTGATTGATTTGCATGCATTACAAAAGGGTTTCTGTAGCTTTGTAGTGTAGGCAAGAAGGGCAACTAGAAGTTGAAATTGTAAAAGTAAAAGAGTCTGGGCCTCAATTCATTAGATTTGCTTTCACCTAGACGATGAATTGTTATTTGATTTGATAGTGCTGATGCCATTAGACGCCATTATTTCTTTGCAATGAATGTTCTTAGCTTCTTTAGATCGACGAGAGACATCTTGAATGACAGTGTGATGGTTATCAAGAAGAGTGAGAAGGTGATTGTGAGATCCCGTGTTAGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCATTAGTAGATGCGTTTTAAAACTGTGAGGCTGATGGTGATAAGTAACAGGCCAAAGTGGAGAATATCTACTGGCAGTAGACTTGGGTTGTTACAAATGGTATTAGAGCCTCAAAAGGGGGTGGACACGAGGCGGTGTGCTAGAAAGGATGTTGGACCTTGAAGAGGGGTGGTTTGTAGGTCCCACATCGATTGGAGAAGGGAACAAGTGCCAGCGAGGATGCTGGGTCCTGAAGGGGGTGGATTGTGCGATCCCACGTTGGTTGGGGAGGAATTCTTTATAAGGGTGTAGAAACCTCTCATTAGCATAGATGTTTTAGAACCGTGAGGCTGACGGCGATAAGTAACGGGCCAAACGGCGATAAGTAATGCCCTTGGTGGTTTTGCTTACTTTTCTTTTATTCAGTTACAATTTCTGAAATCAATGCAGCTGTTCTTTTGTTATTATAGGTAGCTTTGTGTTTGTTTGCTCACCAGTTTCTTTTTTTCGTTTTTTAAATTACGACTTCAAATTTGTTTATTTCATTTTGGTTTTCTTGGCGATCACGAACTATATGTACTTTTAATCTTCAGAAACAAGCTGCAAAGGACGTATTTCAGTTGTTTGCTGAGAAGGTGAGAGACCACAAGGATTTAGAATCAAGGTGGGCCGTTTTACAAGAGACGCGTGTCGAGTATTTCAGAGGCAAGGATTTTGTTAGTTTTTTGAGAAATCATCCAGAGGTGAAGGAAATTCTTGATTCAGATAAGAATTTGGAAACTGAAGATATTGGCAATGCATTGCTAAGTAAGAATCTCTTAGTTCGATGCGATCGTGTGGTGAAAACTGTTCGTCCTGGGAAAAGAAAGTTGTCTACATGGCCAGCGCATTTGGAGATATTTCCGGTGTGTCTTTTAATGCATAACTTCTTTCTTTTAAAGTTGGAGACTTCCAATATACTCGAATTGTGAACACATTTGTACCGAACATATTCTCGGACCATCTTCCGAGGTTTTGAACGTGCAACTTAACTCTTGCAGGATCAGGTGTTCTCTGAGCAGGATGCCTTTTTTGCTTGGACATTTGTTAAACGGCGGCCATTTTGGCAGACCCTTCTTTCATTTTGTTGGCCTGTGTTGACTCTTGCAATATGCTTGTTTCCTGTATATCCTCATCAGTGCAAGCTTTTGATACTCTACTCGTGCGCCGGGGTTCTGCTTCTTATACTCTCGCTTCTTTTATGTAGGTCATACAGCACTTTTCATTGGTTTACTTTTGTATTGTGCTTCATTTGCATTCATTTACTATAAATCATGTTGGGAGTGCAGCCTGAGGTATCATGGTAGGATGATTTCACAATGTTCTTAGATGTTCCATGCTTATTGGCTATGTTCGATTTACCTATCTTATATATTTTATCATATTTTGAGTATTCGAGTAGTTCCTACGTAGCTTGAGCCTGAGCAATTCCATGTCTTGGATTGAGCAAGTTGTTGGAACTGCTTTAGCCTTTACTAGAAGTGCCTATGTTGCATTTTATGGGCAGGATTCTTTCTTCCAGGTCCATTGTTACATGTTTTCATTTAATTTTGCAGTGAGGGGAGCAGTATTTGGCATTTTGTATATTCTTGTGGGCAAGCGCATGTGGTTTTTCCCCAATATTCTCGCCGAGGAAGCGACTTTGCGAGAATTGTTCCGTTTTTGGCCGAGTAAAGATGAAGAAGAGAAACCGAAATGGACAACCAGACTTTTCTATGCACTGGTGGCTGTACTGATCATACTACTGATGAGGCATCACGCTCCCGATGAGGCTGCCCGAGCAAGGTTAGTGCCATACCTTTCTAAACTTTGATACCACTAAAGATTGGTTAGAGAAGTCTATATATCATAATTGGTAACTATCCATAGAAAAGTCTTTACTACCGGTGTATGGTTTTGTATAGCGGGTTTATCGTATGATGGTAACGATGTTGTGAGGCTCTGTCCAATGTAGAAGATCGAAGAAACACATGACTCGAGCATTTGCTCCATTTTATGAAATACAAAGATATGAACAGCAAATACTTTGTGTTTGGTCATGAACTCCGTTTACGCTTGCAGATATCAGAAGCGTGTATCGAATATCATTGATGATGTTCTGGAATGGTCTCCAAGACTTGCTCTTTCTGGGATGATGGAGAAGCAGCAAACAGTGGTCAATGCCACAAATCCGAACCCCGACGTGGCGGAGAACCAAACAGGTGATAGTACAGGTCCAGATGCTGTCCCCGACCAACCTGAGGCTGAAATTATCGACAACGTAGAGCATTCTGATCATTATAATCAGGATGGCGATCATACACATCAATAGGTTTGTTCAATCTTTTGTGGAAGAGAACCATGATAAATGTGTTCCTATATGAGCTTTGTTTTAATTTTGATTGTTTAAAACAGTTGGGTTTTGTTACTTATATCCTTTTTTAGGAGTCACAGAAGTTGGTTTATATCCAAACTAAAGTGAGCTTTTCTACTGAATTCTTCCTGATTTATACCACAAGTCATCTGTGACATGTACATGTAAACTTTTCTTTAAAACGCTTCTAGTCAATCATCTCTACTTTTTTTGTGGCAAATCCGATTTTCGTCGTAGATTTCTCATTCCC AAGTGAAGAAATGGTTTCGTAAATTTTGTTTCCTTCTGTTTTTTTCTTTTATTGACTTCACCAAAACGTTTCCCAATTTTTTCTTCGCAACCAAACGCACTCACAGCGGCGAAGAACCCACGGGAACGCCTAATTTTTCCCCTTTTTCTTTTTGAATCGAATCGGGCTGTGAGATGAGGAAAACAGGAGGAACCGACAAGAAGAGGGTCAGAAGGCAATCAACTGCTGTTCAAAATGCTGCCAAAGATCCCAATTCCGATACTCCTCCTAGGAAACAAGCTGCAAAGGACGTATTTCAGTTGTTTGCTGAGAAGGTGAGAGACCACAAGGATTTAGAATCAAGGTGGGCCGTTTTACAAGAGACGCGTGTCGAGTATTTCAGAGGCAAGGATTTTGTTAGTTTTTTGAGAAATCATCCAGAGGTGAAGGAAATTCTTGATTCAGATAAGAATTTGGAAACTGAAGATATTGGCAATGCATTGCTAAGTAAGAATCTCTTAGTTCGATGCGATCGTGTGGTGAAAACTGTTCGTCCTGGGAAAAGAAAGTTGTCTACATGGCCAGCGCATTTGGAGATATTTCCGGATCAGGTGTTCTCTGAGCAGGATGCCTTTTTTGCTTGGACATTTGTTAAACGGCGGCCATTTTGGCAGACCCTTCTTTCATTTTGTTGGCCTGTGTTGACTCTTGCAATATGCTTGTTTCCTGTATATCCTCATCAGTGCAAGCTTTTGATACTCTACTCGTGCGCCGGGGTTCTGCTTCTTATACTCTCGCTTCTTTTATTGAGGGGAGCAGTATTTGGCATTTTGTATATTCTTGTGGGCAAGCGCATGTGGTTTTTCCCCAATATTCTCGCCGAGGAAGCGACTTTGCGAGAATTGTTCCGTTTTTGGCCGAGTAAAGATGAAGAAGAGAAACCGAAATGGACAACCAGACTTTTCTATGCACTGGTGGCTGTACTGATCATACTACTGATGAGGCATCACGCTCCCGATGAGGCTGCCCGAGCAAGATATCAGAAGCGTGTATCGAATATCATTGATGATGTTCTGGAATGGTCTCCAAGACTTGCTCTTTCTGGGATGATGGAGAAGCAGCAAACAGTGGTCAATGCCACAAATCCGAACCCCGACGTGGCGGAGAACCAAACAGGTGATAGTACAGGTCCAGATGCTGTCCCCGACCAACCTGAGGCTGAAATTATCGACAACGTAGAGCATTCTGATCATTATAATCAGGATGGCGATCATACACATCAATAGGTTTGTTCAATCTTTTGTGGAAGAGAACCATGATAAATGTGTTCCTATATGAGCTTTGTTTTAATTTTGATTGTTTAAAACAGTTGGGTTTTGTTACTTATATCCTTTTTTAGGAGTCACAGAAGTTGGTTTATATCCAAACTAAAGTGAGCTTTTCTACTGAATTCTTCCTGATTTATACCACAAGTCATCTGTGACATGTACATGTAAACTTTTCTTTAAAACGCTTCTAGTCAATCATCTCTACTTTTTTTGTGGCAAATCCGATTTTCGTCGTAGATTTCTCATTCCC ATGAGGAAAACAGGAGGAACCGACAAGAAGAGGGTCAGAAGGCAATCAACTGCTGTTCAAAATGCTGCCAAAGATCCCAATTCCGATACTCCTCCTAGGAAACAAGCTGCAAAGGACGTATTTCAGTTGTTTGCTGAGAAGGTGAGAGACCACAAGGATTTAGAATCAAGGTGGGCCGTTTTACAAGAGACGCGTGTCGAGTATTTCAGAGGCAAGGATTTTGTTAGTTTTTTGAGAAATCATCCAGAGGTGAAGGAAATTCTTGATTCAGATAAGAATTTGGAAACTGAAGATATTGGCAATGCATTGCTAAGTAAGAATCTCTTAGTTCGATGCGATCGTGTGGTGAAAACTGTTCGTCCTGGGAAAAGAAAGTTGTCTACATGGCCAGCGCATTTGGAGATATTTCCGGATCAGGTGTTCTCTGAGCAGGATGCCTTTTTTGCTTGGACATTTGTTAAACGGCGGCCATTTTGGCAGACCCTTCTTTCATTTTGTTGGCCTGTGTTGACTCTTGCAATATGCTTGTTTCCTGTATATCCTCATCAGTGCAAGCTTTTGATACTCTACTCGTGCGCCGGGGTTCTGCTTCTTATACTCTCGCTTCTTTTATTGAGGGGAGCAGTATTTGGCATTTTGTATATTCTTGTGGGCAAGCGCATGTGGTTTTTCCCCAATATTCTCGCCGAGGAAGCGACTTTGCGAGAATTGTTCCGTTTTTGGCCGAGTAAAGATGAAGAAGAGAAACCGAAATGGACAACCAGACTTTTCTATGCACTGGTGGCTGTACTGATCATACTACTGATGAGGCATCACGCTCCCGATGAGGCTGCCCGAGCAAGATATCAGAAGCGTGTATCGAATATCATTGATGATGTTCTGGAATGGTCTCCAAGACTTGCTCTTTCTGGGATGATGGAGAAGCAGCAAACAGTGGTCAATGCCACAAATCCGAACCCCGACGTGGCGGAGAACCAAACAGGTGATAGTACAGGTCCAGATGCTGTCCCCGACCAACCTGAGGCTGAAATTATCGACAACGTAGAGCATTCTGATCATTATAATCAGGATGGCGATCATACACATCAATAG
BLAST of CmoCh11G008610 vs. TrEMBL
Match: A0A0A0LXB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613570 PE=4 SV=1) HSP 1 Score: 682.6 bits (1760), Expect = 2.7e-193 Identity = 342/364 (93.96%), Postives = 354/364 (97.25%), Query Frame = 1
BLAST of CmoCh11G008610 vs. TrEMBL
Match: V4W0L9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015746mg PE=4 SV=1) HSP 1 Score: 555.4 bits (1430), Expect = 5.0e-155 Identity = 283/358 (79.05%), Postives = 312/358 (87.15%), Query Frame = 1
BLAST of CmoCh11G008610 vs. TrEMBL
Match: M5WTL0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007283mg PE=4 SV=1) HSP 1 Score: 555.4 bits (1430), Expect = 5.0e-155 Identity = 278/354 (78.53%), Postives = 310/354 (87.57%), Query Frame = 1
BLAST of CmoCh11G008610 vs. TrEMBL
Match: A0A067JRE6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25930 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 5.5e-154 Identity = 285/359 (79.39%), Postives = 309/359 (86.07%), Query Frame = 1
BLAST of CmoCh11G008610 vs. TrEMBL
Match: W9RTI5_9ROSA (Translocation protein sec62 OS=Morus notabilis GN=L484_015302 PE=4 SV=1) HSP 1 Score: 549.7 bits (1415), Expect = 2.7e-153 Identity = 280/371 (75.47%), Postives = 316/371 (85.18%), Query Frame = 1
BLAST of CmoCh11G008610 vs. TAIR10
Match: AT3G20920.1 (AT3G20920.1 translocation protein-related) HSP 1 Score: 479.6 bits (1233), Expect = 1.8e-135 Identity = 241/354 (68.08%), Postives = 289/354 (81.64%), Query Frame = 1
BLAST of CmoCh11G008610 vs. NCBI nr
Match: gi|449442525|ref|XP_004139032.1| (PREDICTED: uncharacterized protein LOC101212624 [Cucumis sativus]) HSP 1 Score: 682.6 bits (1760), Expect = 3.9e-193 Identity = 342/364 (93.96%), Postives = 354/364 (97.25%), Query Frame = 1
BLAST of CmoCh11G008610 vs. NCBI nr
Match: gi|659099093|ref|XP_008450425.1| (PREDICTED: uncharacterized protein LOC103492034 [Cucumis melo]) HSP 1 Score: 679.1 bits (1751), Expect = 4.3e-192 Identity = 341/364 (93.68%), Postives = 353/364 (96.98%), Query Frame = 1
BLAST of CmoCh11G008610 vs. NCBI nr
Match: gi|1009118511|ref|XP_015875897.1| (PREDICTED: uncharacterized protein LOC107412609 [Ziziphus jujuba]) HSP 1 Score: 567.0 bits (1460), Expect = 2.4e-158 Identity = 285/363 (78.51%), Postives = 317/363 (87.33%), Query Frame = 1
BLAST of CmoCh11G008610 vs. NCBI nr
Match: gi|694432735|ref|XP_009343706.1| (PREDICTED: uncharacterized protein LOC103935641 [Pyrus x bretschneideri]) HSP 1 Score: 559.7 bits (1441), Expect = 3.8e-156 Identity = 280/354 (79.10%), Postives = 312/354 (88.14%), Query Frame = 1
BLAST of CmoCh11G008610 vs. NCBI nr
Match: gi|645241938|ref|XP_008227317.1| (PREDICTED: translocation protein sec62 [Prunus mume]) HSP 1 Score: 558.1 bits (1437), Expect = 1.1e-155 Identity = 281/354 (79.38%), Postives = 310/354 (87.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |