CmoCh11G008540 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTCCACGCACCTTCTTCCCCACGCCGTTACCTCCTCCGTTTCAGCAGCTCAGCGGCGCCATCGTCGTCGGCAATTCTCCTATATATAAGGGATATATTCGAGTCGCTGAGGCTGCGCGGGAGAGAAAGAAGGTTTACTGCGGGTGCCATGGCGGCCGAGGATATGGAGAATGGTGAGTTTTACTTGAGATATTATGTAGGGCACAAAGGAAAATTTGGGCACGAGTTCTTGGAGTTCGAATTCCGACCTGATGGCAAGCTTCGCTACGCTAACAACTCCAATTACAAGAACGATACGATGATTCGCAAGGAAGTCTACCTCACTCCTGCTGTCCTCCGGGAATGCCGTCGAATCATCTCCGATAGCGAGGTTAGGGTTTCCTTTGCATCACCGTTTTTAGGGTTTTCTTTTGTTTACTTTGAGATTATGTTTCTCTGCTGCATTGCTTCTGTTTGTTTTACGACTTCTTTTTCTCCTCTACTTTTGAAATACTCTATGAACATAGCAATATCGGCTTTTCATCTTCGACAGCCAATCCTTAACCCCTTAGAATCTTCGGCTTTTCAATATCGACTACTTTTTTCCTTCATGAAATCCATTTGACAATGTTTCTTTAAGAAGATATTCAGCTTATCCCAAATAGTTACCCACCCAGCTTTGTTGAATTGAACTAGAATGCGGATATACATTATCTTCCACCCGTGCTAGCCAAAATCTTGTGTTTCACATGCCATCGCAAATCTATCTTGCATATAAAAGCTTCAATGGATCGGATTATGCATCAAATCAACCGTAGATTTCTCAATCCAAATGAGATGGGCTAATTCAATAGGTAAGAATCTTTTCTATCCAGTTCCTCTATGAAAAAATGATCATTTTCAAACCATTTAAAGTAAATTTTATTCTGAATACAACAGTTGCTTAAATCCATAATGCTTGAACACAAAGAAACTTAGAAGAGCTGAACTGGAAAAAGGAAGGAAATACACTTGAACACTTAATTGGTCAGAGTTGATCAGGGAGAAAATCCTTAAAAGAATTAAAATATAATCACTCAGATGCAAAGATTCCTCATTTTTAACAGTGGTATAATGTTGTTTGACCTTAGGCTGAAGGGAAATTAAAAAGGATTCACAACTTTATGGAGATTGTTGAGTTTGATAGTATTGTCACTTGAAAAAGGAGCATGTTACTGACAAGTTGACGACGAGTGATGTGAATAGTGTCATTATCAACAATGAATCTTTAGAGGCTACCATCTCAGAAGCCTTTGTCAAGTGAACTATTTAGAGTAGCCACCTCTTAGGCAAAATGGAAGGCAAGGGGGTGACCTTGCTTAAGACGTCTTGAAACTTTAATCTAAAACCTCTCAGCTTTCCATTACGGAAGAGCAAGAAAGTACTGCAATCCCATTAGAACGTGCTCTTTGATGCTGTTCCAATTCTTCAAGATTCCTCCAGTAGCCAGTCAAGGCCAAAACTATTAAGTGCGACTTTCTTTCATGCCATAGGCACTCCAAACAAGGAATGGGCTCCATAGGTGAAAGGGATCCTTTTCTTATTGTCAATCAAGCATATGGGACAGCTAATCTAATTAGATTTAAGGGGGGATATACTACTAAAGATATTTGGTTCCCTGTAGATTCGTAGCGAATTATTTTTTAAATTGAAAGGCGTGTGAACAGATTGGAAAATGATTCTAAGTGGTGCGAAGCATTCTTTCAACTCTTCAAAAATGAAGTTTGATATTCTGTGCTAGTTTAATAAAAATTCAGTTGATCCCTATTGTTGGTGACCAATTGAAATCACCATTTTATGAAGGGAGATCAATCAAAGAAAGGCCATCAATAAACTTATTGAAGTATCAACAATGCACCATCTACTAATAATGAAGATCTCTTGTGACTCCATCTAGTAATAATGAAGTCATCACACCTTGCACTATAGTTAGAAAGAGCCTCAAGCTGTCGCAAAAATAATATTTCAAAAGAATCTTACCTCATTAGACTAATTAAAAAAAATTCTGATGTTCATATGTTGTCGTTGAATTCGGTTTCTCATAGATCTGATCTATCACCCCCTTTTTCCAAGCTATGCAAAAGAGGATGAGATTATTTTACTATTTGGATTTTGAGCGTCTTCAATTATTTTCTTCCTTTTTGAATAAAATGTTACGTTCCCAATGCGATTGAGACGAGTCTTCTTTGTTCCTCCCGTATTTTCTTTCTCCATGATGTATTTGACAAAGAGCATTTTGAAATTGAATCTGTTTGTCAGTTGCCTCGAAATGCTTTATTTTATCTCCTTTTGGAACTTGTCTCTGTTCAGATAATGAAGGAAGATGACAATAATTGGCCAGAACCCGATCGGGTTGGACGACAGGAGCTGGAGATTGTGATGGGAAACGAGCATATCTCCTTTACTACATCTAAGATTGGATCTCTTGTTGATGTGCAAAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGTAAAGCTTAATTCTCTGCGTAGATTACTTAAACATGGAAGGTTTCTATCTGCCTTTTAGACCGTCTCTGTCTCTAGATTCTTGAGTATTACATGCATTATATCTTTATACGCATGACATTATCAAGCTTAGATCATATTTGTGTTTTCTTTGGCTGTAGGATCTGAAATGCTTTGTATTTTCTCTCATTTCACTCCACTACAAGATCAAGCCAATTTAAAGACGGCCCAAAATTCCTAGTGTGCAATCTGAGGAACACTTCTCTCCAAACTGTGAAATCTTATTTTGGGCATTTTTTGAACTGCAAAATTCGGGATTCAGAATCATTATTGTTTTTAGAGTTCTCTGGATTTCATGTATATGCACAGACGATGGGCGTTGTATGACCTTTATTTTAATTAGAATATGTCCTGGATAGATAGAATGCCGGCTGATGGCATCTGCATGCTTTCTTTTTTCAGCTTAGAATATGCTTTCCTTTCATGAAACTGTAATTAAATTTGAAGTTTCCTGATTGAAGTTTGGATTATGTGATGTCACAATCACTCACACACTCACAGAGTGATTGCACCTATTCTCACCGAC GCTCCACGCACCTTCTTCCCCACGCCGTTACCTCCTCCGTTTCAGCAGCTCAGCGGCGCCATCGTCGTCGGCAATTCTCCTATATATAAGGGATATATTCGAGTCGCTGAGGCTGCGCGGGAGAGAAAGAAGGTTTACTGCGGGTGCCATGGCGGCCGAGGATATGGAGAATGGTGAGTTTTACTTGAGATATTATGTAGGGCACAAAGGAAAATTTGGGCACGAGTTCTTGGAGTTCGAATTCCGACCTGATGGCAAGCTTCGCTACGCTAACAACTCCAATTACAAGAACGATACGATGATTCGCAAGGAAGTCTACCTCACTCCTGCTGTCCTCCGGGAATGCCGTCGAATCATCTCCGATAGCGAGATAATGAAGGAAGATGACAATAATTGGCCAGAACCCGATCGGGTTGGACGACAGGAGCTGGAGATTGTGATGGGAAACGAGCATATCTCCTTTACTACATCTAAGATTGGATCTCTTGTTGATGTGCAAAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGATCTGAAATGCTTTGTATTTTCTCTCATTTCACTCCACTACAAGATCAAGCCAATTTAAAGACGGCCCAAAATTCCTAGTGTGCAATCTGAGGAACACTTCTCTCCAAACTGTGAAATCTTATTTTGGGCATTTTTTGAACTGCAAAATTCGGGATTCAGAATCATTATTGTTTTTAGAGTTCTCTGGATTTCATGTATATGCACAGACGATGGGCGTTGTATGACCTTTATTTTAATTAGAATATGTCCTGGATAGATAGAATGCCGGCTGATGGCATCTGCATGCTTTCTTTTTTCAGCTTAGAATATGCTTTCCTTTCATGAAACTGTAATTAAATTTGAAGTTTCCTGATTGAAGTTTGGATTATGTGATGTCACAATCACTCACACACTCACAGAGTGATTGCACCTATTCTCACCGAC ATGGCGGCCGAGGATATGGAGAATGGTGAGTTTTACTTGAGATATTATGTAGGGCACAAAGGAAAATTTGGGCACGAGTTCTTGGAGTTCGAATTCCGACCTGATGGCAAGCTTCGCTACGCTAACAACTCCAATTACAAGAACGATACGATGATTCGCAAGGAAGTCTACCTCACTCCTGCTGTCCTCCGGGAATGCCGTCGAATCATCTCCGATAGCGAGATAATGAAGGAAGATGACAATAATTGGCCAGAACCCGATCGGGTTGGACGACAGGAGCTGGAGATTGTGATGGGAAACGAGCATATCTCCTTTACTACATCTAAGATTGGATCTCTTGTTGATGTGCAAAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGATCTGAAATGCTTTGTATTTTCTCTCATTTCACTCCACTACAAGATCAAGCCAATTTAA
BLAST of CmoCh11G008540 vs. Swiss-Prot
Match: MGN_ORYSJ (Protein mago nashi homolog OS=Oryza sativa subsp. japonica GN=Os12g0287200 PE=2 SV=2) HSP 1 Score: 283.9 bits (725), Expect = 1.0e-75 Identity = 137/152 (90.13%), Postives = 146/152 (96.05%), Query Frame = 1
BLAST of CmoCh11G008540 vs. Swiss-Prot
Match: MGN_EUPLA (Protein mago nashi homolog OS=Euphorbia lagascae PE=2 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 2.6e-74 Identity = 134/146 (91.78%), Postives = 141/146 (96.58%), Query Frame = 1
BLAST of CmoCh11G008540 vs. Swiss-Prot
Match: MGN_ARATH (Protein mago nashi homolog OS=Arabidopsis thaliana GN=At1g02140 PE=1 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 4.9e-73 Identity = 133/152 (87.50%), Postives = 143/152 (94.08%), Query Frame = 1
BLAST of CmoCh11G008540 vs. Swiss-Prot
Match: MGN_SALSA (Protein mago nashi homolog OS=Salmo salar GN=magoh PE=2 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 5.8e-66 Identity = 119/147 (80.95%), Postives = 129/147 (87.76%), Query Frame = 1
BLAST of CmoCh11G008540 vs. Swiss-Prot
Match: MGN_DANRE (Protein mago nashi homolog OS=Danio rerio GN=magoh PE=2 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 5.8e-66 Identity = 119/147 (80.95%), Postives = 129/147 (87.76%), Query Frame = 1
BLAST of CmoCh11G008540 vs. TrEMBL
Match: A0A0A0L898_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116780 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 5.2e-82 Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of CmoCh11G008540 vs. TrEMBL
Match: A0A022PUT9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015616mg PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.3e-77 Identity = 141/150 (94.00%), Postives = 148/150 (98.67%), Query Frame = 1
BLAST of CmoCh11G008540 vs. TrEMBL
Match: A0A0D2R0E2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G069800 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.3e-77 Identity = 144/152 (94.74%), Postives = 151/152 (99.34%), Query Frame = 1
BLAST of CmoCh11G008540 vs. TrEMBL
Match: A0A061DVQ4_THECC (Mago nashi family protein OS=Theobroma cacao GN=TCM_005726 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.3e-77 Identity = 144/152 (94.74%), Postives = 151/152 (99.34%), Query Frame = 1
BLAST of CmoCh11G008540 vs. TrEMBL
Match: A0A067H0V3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031940mg PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 1.7e-77 Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 1
BLAST of CmoCh11G008540 vs. TAIR10
Match: AT1G02140.1 (AT1G02140.1 mago nashi family protein) HSP 1 Score: 275.0 bits (702), Expect = 2.7e-74 Identity = 133/152 (87.50%), Postives = 143/152 (94.08%), Query Frame = 1
BLAST of CmoCh11G008540 vs. NCBI nr
Match: gi|449431952|ref|XP_004133764.1| (PREDICTED: protein mago nashi homolog [Cucumis sativus]) HSP 1 Score: 311.6 bits (797), Expect = 7.5e-82 Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of CmoCh11G008540 vs. NCBI nr
Match: gi|659074743|ref|XP_008437772.1| (PREDICTED: protein mago nashi homolog [Cucumis melo]) HSP 1 Score: 310.5 bits (794), Expect = 1.7e-81 Identity = 149/152 (98.03%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of CmoCh11G008540 vs. NCBI nr
Match: gi|1012232728|ref|XP_015938823.1| (PREDICTED: protein mago nashi homolog [Arachis duranensis]) HSP 1 Score: 297.7 bits (761), Expect = 1.1e-77 Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 1
BLAST of CmoCh11G008540 vs. NCBI nr
Match: gi|848925891|ref|XP_012858801.1| (PREDICTED: protein mago nashi homolog [Erythranthe guttata]) HSP 1 Score: 297.0 bits (759), Expect = 1.9e-77 Identity = 141/150 (94.00%), Postives = 148/150 (98.67%), Query Frame = 1
BLAST of CmoCh11G008540 vs. NCBI nr
Match: gi|823147714|ref|XP_012473772.1| (PREDICTED: protein mago nashi homolog [Gossypium raimondii]) HSP 1 Score: 297.0 bits (759), Expect = 1.9e-77 Identity = 144/152 (94.74%), Postives = 151/152 (99.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |