CmoCh11G007920 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAACAACATTTCTGTAAAAGGAATCAAAATTGGGGGAAAAAGCCAAGAAAAAATTGAAGATTTGCAACTGGGAATTAGCCATTTTCACCGATCGACGAGGACTCTGAGGTCCGCCATTAAAATCAACATCACCACCTTAAATTAAATTAATTGTTGGACAGTTGCCAATTGCCGCTGATCGAGAGGGAAGAAAGCAAGGGTTTTTGGTAATACATTTCACGCTACTATAAAGCCTCATTTCCTTCACTGTTCTGTTCCTTCTCCTTTGCTCCAGCCATCGCGTTTTTTCGAACCCAGAAACCATTTTCGATTTCTTCTTCTCTCCCCCATTTGAGCTTTTTGTCTTAACTTTTCATTTCAGCAAATGGGTGACGAGAAGAAGCCTAAATCCCTTGGTGTTTGGCCCACCGTCAAGCCCTTCGTCAATGGAGGCCTCTCTGGTATGCTTGCGACTTGCGTCATTCAACCCATCGATATGATCAAGGTAACACAAATCTTCAGATTTACCTGCTACGTGTGAGGAATCTTTGTGATTTAACCGGATTTTGTTGCTTGTTGGTTCGCTGAGATTTTGTTTTTCATTGAGTTCGGATTGGAGTTTCTTGATGGAATTTAGATCTAGGGTTTTTTTAGGGTTTTTTTTTTTTTTTTTCTGTCTTTTGGCTGTTTTATGCGTTTTTGAGTTTATTTGTTGTTTTAATAATGTGTTCTTGATTTGGTTCAGGTGAGAATCCAGTTAGGTCAGGGCTCGGCAGGCGAGGTAACCAGGAACATGCTTAAGGCGGAGGGAGTTGGTGCTTTTTACAAGGTGAGTTTTAAAGATCCAGTTGAAGTTTGTGATTATTACTTGAAATGTACTGTGGATCTTGTGGCGTGTAACATTGTAGAATACTGGCTTGGTATTAACTTTCTTGTTGGTTTGGAGATCTTGTCCCTTTGAGGTCTTTTGAGGAGCCAAGAAGGATATTCTGGTTTAGAGATTGACTTATTGATCCGATTTGTGCTGGTATTGATTGTAAATGGTGGATGGATCAACTTCTATCCTACATTACAATCTTGTTTTCTGTTTCGAAAACTGTAAGAGATGTATGATTTTTGCCACCCGGTTAGGATTTTAAGATCTTGTGAATTTTCGGTCTACTAAATGTTGAAGCTTAGTTGCCTGGATATCTACATATACATGTGAAAGATGTAGGTACTGTCTTTCGCTTGATTCATTGATGCTGTGATTTGTAACCGGGCGAACTTTGCTGCCTCTTCACTCTCCTTCAGACGATTATGATACAGGATCGTATCTCTTGGAGAGAGGCTCAGAAGCTCTCTCTTTGACTCAGGAGGGCGTTCCACCACTTCGACTGGTGCGGATGCGGACGTGGTTCCCTCGTCGTGAAGAGTAATGAAAGGGAATCCCTTGGTCAAACCGCCTTTGTTGTTGTCTGTATAGCTTGATAGAGGAGATATCTAGCAACACATTCTAGGCATAGATCATTGGTATTGGATGCATTGTTGGGTTGTGCCGAGTTAAATTAGCTTCATATTTTTCCGTGGTAGAAAAGAGATCCCTTCCCCCCGGTTTCTAAAATGAAAATTGGGTGTTTGGTGGTTAGGGATTGGGCAATTACTAGATCATTTGAAGGTTTCTTGTGTCGCATGTACGTATGTTTTGCGTGTCCTTGGCTGCCTTCGATAAGTGAACTGACTAAACTAAGAGGAAAAATGGAAGTCTGATCATTTTGGCTTGTATACTTCGCAATACGTTGTGCATACTATTGTCGTGTTAGTTGCCTGCTTATTTATAGTCTTCACAAGAAAATGATGTAAAATTCTAATGTGCATAATGTCGAGCAGGGTCTGTCTGCTGGGCTTCTTAGACAAGCTACCTATACTACTGCACGGCTTGGATCGTTCAAGTGAGTTTTATGCTGAATTTTATTTTCGAAAAGTATAAGTTTCTTGTGTAATGAACTGTATTAATTGTTTAATGGATGTTCTTCTTCGTTCCTTCTGTAGGATTTTGACAAACAAAGCAATTGAAGCTAATGACGGCAAGCCCCTTCCTCTTTATCAAAAAGCTTTGTGTGGGTTAACAGCTGGTGCTATTGGAGCATCTTTTGGCAGTCCAGCAGATTTGGCGCTTATCCGAATGCAGGCTGATGCTACCCTCCCAGCTGCACAACGCAGACACTACAAAAACGCATTCCATGCACTGTATCGTATTGTTGGAGATGAGGGTGTTTTGGCTCTTTGGAAGGGTGCTGGTCCAACAGTAGTGAGAGCAATGGCGCTGAATATGGGCATGCTTGCCTCCTACGATCAAAGTGTTGAGTTTTTCAAGGATAACCTCGGTTTTGGTGAAGCTACGACGGTTATAGGTGAGATTCTTTGCCCATTTCATGATCGAATTTCTTCACAATCTTGTTATACACTTTGTATATTTCATGCTCTATGCATTGTTCATCTTTATTCTATTTTTCGAAACTGGAAACTTGTTCCCCTTTTGGAGTCTACATGACTTGTCAATGAAAATTATGGAACTTTCTAGATTCAGCCCAAGCCACCGCTAACAAATATTGTCCTCTTTGGGCTTTTTCTCTCAGGCTTCCCTTCAAGGTTTTTAAAACACGTTTGCTAGGTAGAGGTTTTTACACCCTTATAAAGAATGTTTCGTTCTCCTCCTGAATCGATGTGGGATCTCACAATCTACTCCCTTTGGGGCCAGCAAATATGCTGGCACTTGTTCCCTTCTCCAATCAATGTGGGATCCCCTAATCCACCTCCTTTGAGCCCAACGTCCTTGCTGGCACATCGTCTTGTGTCCACCCCTTCGAACCAGCATATTCGCTGGCACTTGTTCCCTTCTCCAATCGATGTGGGACCCCCCAATCCACCTCCTTTGGGCTCAGCGTCCTTGCTGGCACATCGCCTGGTGTCTGGCTATGATACCATTTGTAATGGCCCAAGCCCACCTCTAGTAAATATTGCTTTCTTTGGACTCTCCCGTATCCCTCAAAGTTTTTAAAACGCATCTGCTAGGGAGAAGTTTCCACACCCTTATAAAGAATGTTTCGATCTCCTCCCCAACCGATGTGGGATCTCACAATCCACCCCCTTCGGGCCCCAGCGTCCTTGCTGGCACATTGCCTTGTGTCCACCCCCCTTCGGGCTCAGTCTCCTCGCTAGCACATTGCCCGGTGTTTGGCTCTGATACCATTTGTAACGGCCCAAGCCCACTGCTAACATATATTGTCCTCTTTTTTGGGCTTTCCCTCAAGGTTATTAAAGCGCATCTAGGGAGAAGTGTCCACACCCTTATAAAGAATGCTATTAAGAGGTTCGAATGGTTGATTGATTGATTGACTGACATGTTGTTTCCATTCTTGCCTACTTTCAGGTGCAAGTGCTGTTTCAGGATTCTTTGCTTCAGCTTGCAGTTTGCCATTTGATTACGTGAAGACTCAGATTCAGAAAATGCAGCCTGATGCTGAAGGGAAGCTTCCTTACTCTGGCTCTATGGATTGTGCCATGAAGACCTTGAAATCTGGCGGGCCGTTGAAATTTTACACTGGCTTCCCTGTTTACTGTATTAGGATTGCTCCACATGTCATGGTACGATCTCTTGCCCGCCCCTCGTTTTCTATTTTATCTTAATCCCGATCTGGCCTCGAGCTAAGTAAAGCCTCACCAAGGTTGGGGATAGGGAGATTGATGATTATTTATCAAGATTTTACTTCTAATATTATGATATACGACAATACAGATGACATGGATTTTCCTCAACCAAGTTCAAAAGTTCGAGAAGACCATTGGACTTTGAGCTCTGGAACGACGGGGTTTCATCTCGACCTGAACAATCTTTAGGAGCGTTTCTTGCCTGCCCTCTTTAAGGGGGGGCTATGTTGTGGTTCTTCATCTTGACAGAAATCGCGCCCGTAAAAGTTAGACTTATTATTATTATCACTATTTTTTATCGCAAGATCGACATGATAGAGTTGAGGGACTAAACTGTGGTATTGATTTCGGGTTGCGACTGGATTATAGGATTTTATTAAAGATTGAAAATTTAGGATTGCTTTTGGTTCAGGAATCAGTGAGGGGACACACTGATTTGAGCAAAATAAAGTTTGGGGGAACTCTTTTTGTTTGACAAAAGGGATGCTGATATCAGTTTTGTCTAACTTGATTGTCTCAGAAACCATCAAGTTTATGCATTAAATTTCATAAACTTCCCCTCTCTCTCTCTCTCTCTCTCTCTGTCCTGTTAGGATCATGTTCTTCTCATGCTGATGTCCTGTTTTGGATGAACAATCCTTTGGTCTGTGTGTGATGTTCGTTCTTTGTTCTAACAGATGGCGGGTTGGCG TTTAACAACATTTCTGTAAAAGGAATCAAAATTGGGGGAAAAAGCCAAGAAAAAATTGAAGATTTGCAACTGGGAATTAGCCATTTTCACCGATCGACGAGGACTCTGAGGTCCGCCATTAAAATCAACATCACCACCTTAAATTAAATTAATTGTTGGACAGTTGCCAATTGCCGCTGATCGAGAGGGAAGAAAGCAAGGGTTTTTGCAAATGGGTGACGAGAAGAAGCCTAAATCCCTTGGTGTTTGGCCCACCGTCAAGCCCTTCGTCAATGGAGGCCTCTCTGGTATGCTTGCGACTTGCGTCATTCAACCCATCGATATGATCAAGGTGAGAATCCAGTTAGGTCAGGGCTCGGCAGGCGAGGTAACCAGGAACATGCTTAAGGCGGAGGGAGTTGGTGCTTTTTACAAGGGTCTGTCTGCTGGGCTTCTTAGACAAGCTACCTATACTACTGCACGGCTTGGATCGTTCAAGATTTTGACAAACAAAGCAATTGAAGCTAATGACGGCAAGCCCCTTCCTCTTTATCAAAAAGCTTTGTGTGGGTTAACAGCTGGTGCTATTGGAGCATCTTTTGGCAGTCCAGCAGATTTGGCGCTTATCCGAATGCAGGCTGATGCTACCCTCCCAGCTGCACAACGCAGACACTACAAAAACGCATTCCATGCACTGTATCGTATTGTTGGAGATGAGGGTGTTTTGGCTCTTTGGAAGGGTGCTGGTCCAACAGTAGTGAGAGCAATGGCGCTGAATATGGGCATGCTTGCCTCCTACGATCAAAGTGTTGAGTTTTTCAAGGATAACCTCGGTTTTGGTGAAGCTACGACGGTTATAGGTGCAAGTGCTGTTTCAGGATTCTTTGCTTCAGCTTGCAGTTTGCCATTTGATTACGTGAAGACTCAGATTCAGAAAATGCAGCCTGATGCTGAAGGGAAGCTTCCTTACTCTGGCTCTATGGATTGTGCCATGAAGACCTTGAAATCTGGCGGGCCGTTGAAATTTTACACTGGCTTCCCTGTTTACTGTATTAGGATTGCTCCACATGTCATGATGACATGGATTTTCCTCAACCAAGTTCAAAAGTTCGAGAAGACCATTGGACTTTGAGCTCTGGAACGACGGGGTTTCATCTCGACCTGAACAATCTTTAGGAGCGTTTCTTGCCTGCCCTCTTTAAGGGGGGGCTATGTTGTGGTTCTTCATCTTGACAGAAATCGCGCCCGTAAAAGTTAGACTTATTATTATTATCACTATTTTTTATCGCAAGATCGACATGATAGAGTTGAGGGACTAAACTGTGGTATTGATTTCGGGTTGCGACTGGATTATAGGATTTTATTAAAGATTGAAAATTTAGGATTGCTTTTGGTTCAGGAATCAGTGAGGGGACACACTGATTTGAGCAAAATAAAGTTTGGGGGAACTCTTTTTGTTTGACAAAAGGGATGCTGATATCAGTTTTGTCTAACTTGATTGTCTCAGAAACCATCAAGTTTATGCATTAAATTTCATAAACTTCCCCTCTCTCTCTCTCTCTCTCTCTCTGTCCTGTTAGGATCATGTTCTTCTCATGCTGATGTCCTGTTTTGGATGAACAATCCTTTGGTCTGTGTGTGATGTTCGTTCTTTGTTCTAACAGATGGCGGGTTGGCG ATGGGTGACGAGAAGAAGCCTAAATCCCTTGGTGTTTGGCCCACCGTCAAGCCCTTCGTCAATGGAGGCCTCTCTGGTATGCTTGCGACTTGCGTCATTCAACCCATCGATATGATCAAGGTGAGAATCCAGTTAGGTCAGGGCTCGGCAGGCGAGGTAACCAGGAACATGCTTAAGGCGGAGGGAGTTGGTGCTTTTTACAAGGGTCTGTCTGCTGGGCTTCTTAGACAAGCTACCTATACTACTGCACGGCTTGGATCGTTCAAGATTTTGACAAACAAAGCAATTGAAGCTAATGACGGCAAGCCCCTTCCTCTTTATCAAAAAGCTTTGTGTGGGTTAACAGCTGGTGCTATTGGAGCATCTTTTGGCAGTCCAGCAGATTTGGCGCTTATCCGAATGCAGGCTGATGCTACCCTCCCAGCTGCACAACGCAGACACTACAAAAACGCATTCCATGCACTGTATCGTATTGTTGGAGATGAGGGTGTTTTGGCTCTTTGGAAGGGTGCTGGTCCAACAGTAGTGAGAGCAATGGCGCTGAATATGGGCATGCTTGCCTCCTACGATCAAAGTGTTGAGTTTTTCAAGGATAACCTCGGTTTTGGTGAAGCTACGACGGTTATAGGTGCAAGTGCTGTTTCAGGATTCTTTGCTTCAGCTTGCAGTTTGCCATTTGATTACGTGAAGACTCAGATTCAGAAAATGCAGCCTGATGCTGAAGGGAAGCTTCCTTACTCTGGCTCTATGGATTGTGCCATGAAGACCTTGAAATCTGGCGGGCCGTTGAAATTTTACACTGGCTTCCCTGTTTACTGTATTAGGATTGCTCCACATGTCATGATGACATGGATTTTCCTCAACCAAGTTCAAAAGTTCGAGAAGACCATTGGACTTTGA
BLAST of CmoCh11G007920 vs. Swiss-Prot
Match: DTC_ARATH (Mitochondrial dicarboxylate/tricarboxylate transporter DTC OS=Arabidopsis thaliana GN=DTC PE=1 SV=1) HSP 1 Score: 509.6 bits (1311), Expect = 2.3e-143 Identity = 248/296 (83.78%), Postives = 268/296 (90.54%), Query Frame = 1
BLAST of CmoCh11G007920 vs. Swiss-Prot
Match: M2OM_NEUCR (Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mic-33 PE=3 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.9e-68 Identity = 141/276 (51.09%), Postives = 179/276 (64.86%), Query Frame = 1
BLAST of CmoCh11G007920 vs. Swiss-Prot
Match: M2OM_HUMAN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3) HSP 1 Score: 231.1 bits (588), Expect = 1.6e-59 Identity = 136/307 (44.30%), Postives = 185/307 (60.26%), Query Frame = 1
BLAST of CmoCh11G007920 vs. Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3) HSP 1 Score: 230.3 bits (586), Expect = 2.7e-59 Identity = 135/307 (43.97%), Postives = 187/307 (60.91%), Query Frame = 1
BLAST of CmoCh11G007920 vs. Swiss-Prot
Match: M2OM_MOUSE (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3) HSP 1 Score: 229.6 bits (584), Expect = 4.6e-59 Identity = 133/295 (45.08%), Postives = 179/295 (60.68%), Query Frame = 1
BLAST of CmoCh11G007920 vs. TrEMBL
Match: A0A0A0LWV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599560 PE=3 SV=1) HSP 1 Score: 578.6 bits (1490), Expect = 4.5e-162 Identity = 284/299 (94.98%), Postives = 292/299 (97.66%), Query Frame = 1
BLAST of CmoCh11G007920 vs. TrEMBL
Match: A0A059D9A4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03603 PE=3 SV=1) HSP 1 Score: 563.5 bits (1451), Expect = 1.5e-157 Identity = 273/299 (91.30%), Postives = 287/299 (95.99%), Query Frame = 1
BLAST of CmoCh11G007920 vs. TrEMBL
Match: W9SZF7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019087 PE=3 SV=1) HSP 1 Score: 559.7 bits (1441), Expect = 2.2e-156 Identity = 272/299 (90.97%), Postives = 288/299 (96.32%), Query Frame = 1
BLAST of CmoCh11G007920 vs. TrEMBL
Match: A0A022QSG9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a010886mg PE=3 SV=1) HSP 1 Score: 554.3 bits (1427), Expect = 9.1e-155 Identity = 271/299 (90.64%), Postives = 285/299 (95.32%), Query Frame = 1
BLAST of CmoCh11G007920 vs. TrEMBL
Match: M5WJ59_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009306mg PE=3 SV=1) HSP 1 Score: 550.4 bits (1417), Expect = 1.3e-153 Identity = 267/299 (89.30%), Postives = 283/299 (94.65%), Query Frame = 1
BLAST of CmoCh11G007920 vs. TAIR10
Match: AT5G19760.1 (AT5G19760.1 Mitochondrial substrate carrier family protein) HSP 1 Score: 509.6 bits (1311), Expect = 1.3e-144 Identity = 248/296 (83.78%), Postives = 268/296 (90.54%), Query Frame = 1
BLAST of CmoCh11G007920 vs. TAIR10
Match: AT4G24570.1 (AT4G24570.1 dicarboxylate carrier 2) HSP 1 Score: 179.1 bits (453), Expect = 4.0e-45 Identity = 102/239 (42.68%), Postives = 145/239 (60.67%), Query Frame = 1
BLAST of CmoCh11G007920 vs. TAIR10
Match: AT2G22500.1 (AT2G22500.1 uncoupling protein 5) HSP 1 Score: 176.8 bits (447), Expect = 2.0e-44 Identity = 98/249 (39.36%), Postives = 147/249 (59.04%), Query Frame = 1
BLAST of CmoCh11G007920 vs. TAIR10
Match: AT5G09470.1 (AT5G09470.1 dicarboxylate carrier 3) HSP 1 Score: 152.1 bits (383), Expect = 5.3e-37 Identity = 93/250 (37.20%), Postives = 135/250 (54.00%), Query Frame = 1
BLAST of CmoCh11G007920 vs. TAIR10
Match: AT3G54110.1 (AT3G54110.1 plant uncoupling mitochondrial protein 1) HSP 1 Score: 151.4 bits (381), Expect = 9.0e-37 Identity = 102/280 (36.43%), Postives = 148/280 (52.86%), Query Frame = 1
BLAST of CmoCh11G007920 vs. NCBI nr
Match: gi|659100291|ref|XP_008451021.1| (PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC-like [Cucumis melo]) HSP 1 Score: 579.7 bits (1493), Expect = 2.9e-162 Identity = 284/299 (94.98%), Postives = 293/299 (97.99%), Query Frame = 1
BLAST of CmoCh11G007920 vs. NCBI nr
Match: gi|778663330|ref|XP_011660062.1| (PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC-like [Cucumis sativus]) HSP 1 Score: 578.6 bits (1490), Expect = 6.5e-162 Identity = 284/299 (94.98%), Postives = 292/299 (97.66%), Query Frame = 1
BLAST of CmoCh11G007920 vs. NCBI nr
Match: gi|702278692|ref|XP_010044939.1| (PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC [Eucalyptus grandis]) HSP 1 Score: 563.5 bits (1451), Expect = 2.2e-157 Identity = 273/299 (91.30%), Postives = 287/299 (95.99%), Query Frame = 1
BLAST of CmoCh11G007920 vs. NCBI nr
Match: gi|703160837|ref|XP_010112635.1| (hypothetical protein L484_019087 [Morus notabilis]) HSP 1 Score: 559.7 bits (1441), Expect = 3.1e-156 Identity = 272/299 (90.97%), Postives = 288/299 (96.32%), Query Frame = 1
BLAST of CmoCh11G007920 vs. NCBI nr
Match: gi|225435760|ref|XP_002285722.1| (PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC [Vitis vinifera]) HSP 1 Score: 557.0 bits (1434), Expect = 2.0e-155 Identity = 271/299 (90.64%), Postives = 284/299 (94.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|