CmoCh11G002500 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCTCCACGCCGGAACGTCCGCCGTTCGCCAACTCCTGCACCGTGCCCAATAGACTACCCACCGGCCTCCTCCGGTCCGTTAAAGTTCTGGTCGTTCTCTGCGCAAAAAAAGCCGCCCATGTCACCAAGAAGCTTAAGTGGAAGCCGAGTCCGGGGACGATGTTGGCTCGGCCGAAGAACGTGCTGAAGACGGTTAGCCTATCGGCGATGACTTTGTTTCGTAAGAAAAAGACCAGCCGGCGAGGTGTACGACCGGAGGGGGATGACGATGAAGAAGAAAAAGAGTGGGGCCGTGTTGGGGTTTGGCAGAGGGGGATCCTGATGGGCGACAAATGCCAGCCGTTGGATTTCCCGGGTGTAATTTACTACGATAGTAACGGCAACAAGGTGAACGAAGCCCCATTCCGTTCGCCACGTGCCAGTCCTTTGCCCGGTTACCTTCTTAGGAAACCTGAGGCCTGA ATGGCTTCCTCCACGCCGGAACGTCCGCCGTTCGCCAACTCCTGCACCGTGCCCAATAGACTACCCACCGGCCTCCTCCGGTCCGTTAAAGTTCTGGTCGTTCTCTGCGCAAAAAAAGCCGCCCATGTCACCAAGAAGCTTAAGTGGAAGCCGAGTCCGGGGACGATGTTGGCTCGGCCGAAGAACGTGCTGAAGACGGTTAGCCTATCGGCGATGACTTTGTTTCGTAAGAAAAAGACCAGCCGGCGAGGTGTACGACCGGAGGGGGATGACGATGAAGAAGAAAAAGAGTGGGGCCGTGTTGGGGTTTGGCAGAGGGGGATCCTGATGGGCGACAAATGCCAGCCGTTGGATTTCCCGGGTGTAATTTACTACGATAGTAACGGCAACAAGGTGAACGAAGCCCCATTCCGTTCGCCACGTGCCAGTCCTTTGCCCGGTTACCTTCTTAGGAAACCTGAGGCCTGA ATGGCTTCCTCCACGCCGGAACGTCCGCCGTTCGCCAACTCCTGCACCGTGCCCAATAGACTACCCACCGGCCTCCTCCGGTCCGTTAAAGTTCTGGTCGTTCTCTGCGCAAAAAAAGCCGCCCATGTCACCAAGAAGCTTAAGTGGAAGCCGAGTCCGGGGACGATGTTGGCTCGGCCGAAGAACGTGCTGAAGACGGTTAGCCTATCGGCGATGACTTTGTTTCGTAAGAAAAAGACCAGCCGGCGAGGTGTACGACCGGAGGGGGATGACGATGAAGAAGAAAAAGAGTGGGGCCGTGTTGGGGTTTGGCAGAGGGGGATCCTGATGGGCGACAAATGCCAGCCGTTGGATTTCCCGGGTGTAATTTACTACGATAGTAACGGCAACAAGGTGAACGAAGCCCCATTCCGTTCGCCACGTGCCAGTCCTTTGCCCGGTTACCTTCTTAGGAAACCTGAGGCCTGA
BLAST of CmoCh11G002500 vs. TrEMBL
Match: A0A0A0LPH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015870 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 9.2e-42 Identity = 96/162 (59.26%), Postives = 114/162 (70.37%), Query Frame = 1
BLAST of CmoCh11G002500 vs. TrEMBL
Match: A0A0A0LSY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042160 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 6.4e-27 Identity = 80/163 (49.08%), Postives = 94/163 (57.67%), Query Frame = 1
BLAST of CmoCh11G002500 vs. TrEMBL
Match: W9S6B5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022292 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.4e-26 Identity = 77/162 (47.53%), Postives = 96/162 (59.26%), Query Frame = 1
BLAST of CmoCh11G002500 vs. TrEMBL
Match: A0A061FV04_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_012247 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.2e-25 Identity = 71/136 (52.21%), Postives = 85/136 (62.50%), Query Frame = 1
BLAST of CmoCh11G002500 vs. TrEMBL
Match: A0A059D018_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00693 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 7.8e-25 Identity = 74/158 (46.84%), Postives = 87/158 (55.06%), Query Frame = 1
BLAST of CmoCh11G002500 vs. TAIR10
Match: AT1G49000.1 (AT1G49000.1 unknown protein) HSP 1 Score: 99.8 bits (247), Expect = 1.6e-21 Identity = 71/171 (41.52%), Postives = 85/171 (49.71%), Query Frame = 1
BLAST of CmoCh11G002500 vs. TAIR10
Match: AT3G18560.1 (AT3G18560.1 unknown protein) HSP 1 Score: 87.4 bits (215), Expect = 8.3e-18 Identity = 67/189 (35.45%), Postives = 89/189 (47.09%), Query Frame = 1
BLAST of CmoCh11G002500 vs. NCBI nr
Match: gi|700208699|gb|KGN63795.1| (hypothetical protein Csa_1G015870 [Cucumis sativus]) HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41 Identity = 96/162 (59.26%), Postives = 114/162 (70.37%), Query Frame = 1
BLAST of CmoCh11G002500 vs. NCBI nr
Match: gi|659066687|ref|XP_008456286.1| (PREDICTED: uncharacterized protein LOC103496246 [Cucumis melo]) HSP 1 Score: 133.7 bits (335), Expect = 2.9e-28 Identity = 83/163 (50.92%), Postives = 96/163 (58.90%), Query Frame = 1
BLAST of CmoCh11G002500 vs. NCBI nr
Match: gi|778657202|ref|XP_011650441.1| (PREDICTED: uncharacterized protein LOC105434785 [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 9.2e-27 Identity = 80/163 (49.08%), Postives = 94/163 (57.67%), Query Frame = 1
BLAST of CmoCh11G002500 vs. NCBI nr
Match: gi|703153867|ref|XP_010110791.1| (hypothetical protein L484_022292 [Morus notabilis]) HSP 1 Score: 126.7 bits (317), Expect = 3.5e-26 Identity = 77/162 (47.53%), Postives = 96/162 (59.26%), Query Frame = 1
BLAST of CmoCh11G002500 vs. NCBI nr
Match: gi|590664162|ref|XP_007036422.1| (Uncharacterized protein TCM_012247 [Theobroma cacao]) HSP 1 Score: 124.4 bits (311), Expect = 1.7e-25 Identity = 71/136 (52.21%), Postives = 85/136 (62.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |