CmoCh11G000710 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G000710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Leucine-rich repeat (LRR) family protein
Location	Cmo_Chr11 : 329665 .. 331818 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCTGGATATGGGTGGTTTATGCCAAGATGCATAGAATCCAACGGACAATGCTATGTAAGAACGGTGGTCTTTGGTAGAAAGATTAGCTCAAGAAGTCTATTAGGGACTTTTAACAACTTTCTTCGATGGAAGATGCTGGTATAATCCAGGAAACAGGAAGAAATTCCAACTCTGGGGCTACTTATTTTTGGACAGGAAAAAAATGAACTATCCATGGTCTTATCATTCATCATTGCTATGATGATGATTTGAAATCTATGGTGAGAAGTCTATAAATAACTGGTGCAGATGGCAGGAGATTGTCCTGAAGTATAGGTTAGATCAATATTTGAGTTATTAATGCTTTGCATCTTAAATATGTGGTTGGGCTATTTTTGCTTTTTGTATAATACTCTTCTCAACTTCCATTGATATGCTTAGCATGTGCTTTTCACAGATCTGTCAATATTGGACTTGGATTTGAGTTGGCCATATTAAAAATTGAAGATGCCCGAATATTTATTTGTATGATTTGTTTCTTCAATTATTTTTTTTATTTCTTCACTTGCATTTACAACTACTGCAGATTATCCCTGATTCGATATCCAGCTTAGAAAATCTAGAAGAGATGAATGCCTCATCCAATCTTCTGGGGTCATTGCCTGACACAATTGGTTTATTGCAAAAGCTGAAACTCCTGAATGTCTCTGGGAACAAGTTGCACGCCCTTCCTGACACAATATGCCAGTGCAGGTACTACGCAAGAAATAACACCTTTCTATCATTTTGCCAATATGATCATAGATCAACTGCTTAAGGCATATTCCTTTGATCAAGAGTGTTTAAATCCCTCACTTTACATGTTTTTGAACAAAAAGTCATCTTTCTAGCATTTCTCCATGACTGTACAGTACCCACATTTCACACGTTTTTTTTAAAAATATATTCAGCTATGGTTTATTATGAATTCTCTGCTGCAAAGTTAAGACTTCTATTTTTGCGTCTTGAATCCGTAGGTCATTGGTGGAGTTAGATGTGAGCTTCAACAGTCTAACGTACTTGCCAACAAATATTGGCCATGAACTGGTGAATTTGCAGAAGCTTGCTATCCAGTTAAACAAAATACGTTCACTTCCCTCTTCTGTTTGTGGTATGAGCTCTTTGCGTTACCTGGATGCTCATTTCAACGAGCTTCATGGCCTTCCTCAGGCAATTGGGAAATTGACTCAACTCGAGTATCTCAACCTAAGCAGTAACTTTACCGACCTTAATGAACTTCCACAGACCTTCGGTGATTTATCCAGCCTTAGGGAACTTGATCTTAGCAATAACCAGATTCACTCTCTACCCGATACATTTGGCCATCTTGAGAATTTAAAGAAACTAAACTTGGAGCAAAATCCTCTTGAAACTCCACCCATGGAAGTCGTAAACAAAGGACCGGATGCTGTGAGGACATTCATGTCCAAGAGGTGGCTTGAAATTCTTGAGGAGGAAGATAGCAAAAGAACACTTGCAGTGGAAGAACAAGGACAGACTGGATGGCTGACTCGAAGCACTTCTTGGGTGAAGACTTACGTTTCTGGGGTTACAGAAACCGTGTCTGGAATTGTTGGATCTCCTAAAAGTCCGAAAGACCCTTTTCTTGATCAGCAGCTATAATGTGATGGAGCTCTTACACCCATGTTTACATTCCTTACACCTCTACCTGTCACGGCCTTGCTTCCTTCTCCCCACACTGATTTTGGGTCCTTGATGATAGGCCTCGATCAGGTTCAGTAGATTCTTTATAATGTCATGAGAACTCATAACAAGCCACAATTATAAGCAATTTTTGTTGGAGTTTGAAGCCTGGATGAGTTTGCTATTGTGTGTTTTTGTAGCGTGTCTACGGCAATTGAACAGTGAGGGAAATTTGCTGGGTTACTTACATTTCTCCCCGGTTCATTACTGGCCGCATTGTACATTTCTCCTTACTAATAACCATATTTTCCCATCCAGTTTGACCTGAATGACTCTCTCACTCCGATATTTAGTTTAAATCAACTTCTTTTCCTTGCACTTTGAAGCCATCGATTATCTTTGGCTATTCATTTCTAACATTACTATCACATCATGTATGAAATATATGTACGTGTAAAGGATAAAGAAAGAAGAGATAGAAAACAT

mRNA sequence

ATGGGGGCTGGATATGGGTGGTTTATGCCAAGATGCATAGAATCCAACGGACAATGCTATATTATCCCTGATTCGATATCCAGCTTAGAAAATCTAGAAGAGATGAATGCCTCATCCAATCTTCTGGGGTCATTGCCTGACACAATTGGTTTATTGCAAAAGCTGAAACTCCTGAATGTCTCTGGGAACAAGTTGCACGCCCTTCCTGACACAATATGCCAGTGCAGGTACTACGCAAGAAATAACACCTTTCTATCATTTTGCCAATATGATCATAGATCAACTGCTTAAGGCATATTCCTTTGATCAAGAGTGTTTAAATCCCTCACTTTACATGTTTTTGAACAAAAAGTCATCTTTCTAGCATTTCTCCATGACTGTACAGTACCCACATTTCACACGTCATTGGTGGAGTTAGATGTGAGCTTCAACAGTCTAACGTACTTGCCAACAAATATTGGCCATGAACTGGTGAATTTGCAGAAGCTTGCTATCCAGTTAAACAAAATACGTTCACTTCCCTCTTCTGTTTGTGGTATGAGCTCTTTGCGTTACCTGGATGCTCATTTCAACGAGCTTCATGGCCTTCCTCAGGCAATTGGGAAATTGACTCAACTCGAGTATCTCAACCTAAGCAGTAACTTTACCGACCTTAATGAACTTCCACAGACCTTCGGTGATTTATCCAGCCTTAGGGAACTTGATCTTAGCAATAACCAGATTCACTCTCTACCCGATACATTTGGCCATCTTGAGAATTTAAAGAAACTAAACTTGGAGCAAAATCCTCTTGAAACTCCACCCATGGAAGTCGTAAACAAAGGACCGGATGCTGTGAGGACATTCATGTCCAAGAGGTGGCTTGAAATTCTTGAGGAGGAAGATAGCAAAAGAACACTTGCAGTGGAAGAACAAGGACAGACTGGATGGCTGACTCGAAGCACTTCTTGGGTGAAGACTTACGTTTCTGGGGTTACAGAAACCGTGTCTGGAATTGTTGGATCTCCTAAAAGTCCGAAAGACCCTTTTCTTGATCAGCAGCTATAATGTGATGGAGCTCTTACACCCATGTTTACATTCCTTACACCTCTACCTGTCACGGCCTTGCTTCCTTCTCCCCACACTGATTTTGGGTCCTTGATGATAGGCCTCGATCAGGTTCAGTAGATTCTTTATAATGTCATGAGAACTCATAACAAGCCACAATTATAAGCAATTTTTGTTGGAGTTTGAAGCCTGGATGAGTTTGCTATTGTGTGTTTTTGTAGCGTGTCTACGGCAATTGAACAGTGAGGGAAATTTGCTGGGTTACTTACATTTCTCCCCGGTTCATTACTGGCCGCATTGTACATTTCTCCTTACTAATAACCATATTTTCCCATCCAGTTTGACCTGAATGACTCTCTCACTCCGATATTTAGTTTAAATCAACTTCTTTTCCTTGCACTTTGAAGCCATCGATTATCTTTGGCTATTCATTTCTAACATTACTATCACATCATGTATGAAATATATGTACGTGTAAAGGATAAAGAAAGAAGAGATAGAAAACAT

Coding sequence (CDS)

ATGGGGGCTGGATATGGGTGGTTTATGCCAAGATGCATAGAATCCAACGGACAATGCTATATTATCCCTGATTCGATATCCAGCTTAGAAAATCTAGAAGAGATGAATGCCTCATCCAATCTTCTGGGGTCATTGCCTGACACAATTGGTTTATTGCAAAAGCTGAAACTCCTGAATGTCTCTGGGAACAAGTTGCACGCCCTTCCTGACACAATATGCCAGTGCAGGTACTACGCAAGAAATAACACCTTTCTATCATTTTGCCAATATGATCATAGATCAACTGCTTAA

Homology

[Close]

BLAST of CmoCh11G000710 vs. Swiss-Prot
Match: PIRL1_ARATH (Plant intracellular Ras-group-related LRR protein 1 OS=Arabidopsis thaliana GN=PIRL1 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-13
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 1


Query: 16  NGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQC 75
           N Q   IPDSI+ L NL E++ S+N L +LPD+IGLL KLK+LNVS NKL  LPD+IC C
Sbjct: 236 NNQLQAIPDSIAGLHNLLELDVSTNFLETLPDSIGLLSKLKILNVSCNKLTTLPDSICHC 295

[Close]

BLAST of CmoCh11G000710 vs. Swiss-Prot
Match: PIRL9_ARATH (Plant intracellular Ras-group-related LRR protein 9 OS=Arabidopsis thaliana GN=PIRL9 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 6.1e-13
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           SN +   IPDSI+ L +L E++ S+N L +LPD+IGLL KLK+LNVS NKL +LPD+IC+
Sbjct: 229 SNNKLESIPDSIAGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNKLTSLPDSICR 288

Query: 75  C 76
           C
Sbjct: 289 C 289

[Close]

BLAST of CmoCh11G000710 vs. Swiss-Prot
Match: PIRL2_ORYSJ (Plant intracellular Ras-group-related LRR protein 2 OS=Oryza sativa subsp. japonica GN=IRL2 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 8.0e-13
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S  Q   +PD+I  LE+LEE+  +SN L SLPD+IGLL  LK+L+VSGNKL +LPD+I +
Sbjct: 222 SRNQLKNVPDAIGGLEHLEELRLASNALVSLPDSIGLLTSLKILDVSGNKLRSLPDSISK 281

Query: 75  CR 77
           CR
Sbjct: 282 CR 283

[Close]

BLAST of CmoCh11G000710 vs. Swiss-Prot
Match: PIRL3_ARATH (Plant intracellular Ras-group-related LRR protein 3 OS=Arabidopsis thaliana GN=PIRL3 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.7e-12
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S      +PD+IS LE LEE++ SSN L  LPD+IGLL  L++LNV+GNKL  LP++I Q
Sbjct: 192 SRNNLRFLPDTISGLEKLEELDLSSNRLVFLPDSIGLLLNLRILNVTGNKLTLLPESIAQ 251

Query: 75  CR 77
           CR
Sbjct: 252 CR 253

[Close]

BLAST of CmoCh11G000710 vs. Swiss-Prot
Match: PIRL3_ORYSJ (Plant intracellular Ras-group-related LRR protein 3 OS=Oryza sativa subsp. japonica GN=IRL3 PE=2 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 8.8e-12
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S  Q  +IPD+I  L++LEE+  +SN L SLPD+IGLL  L++LNV  N+L +LPD+I +
Sbjct: 170 SRNQLEVIPDAIGGLDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISK 229

Query: 75  CR 77
           CR
Sbjct: 230 CR 231

[Close]

BLAST of CmoCh11G000710 vs. TrEMBL
Match: A0A0A0LRY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003450 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.0e-20
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S+ Q  IIPDSIS LENLEE+NASSNLL SLPD+IGLLQKLKLLNVS NKLHALPDTIC 
Sbjct: 248 SSNQLQIIPDSISGLENLEELNASSNLLESLPDSIGLLQKLKLLNVSANKLHALPDTICH 307

Query: 75  CR 77
           CR
Sbjct: 308 CR 309

[Close]

BLAST of CmoCh11G000710 vs. TrEMBL
Match: A0A0B2RG83_GLYSO (Protein lap1 (Fragment) OS=Glycine soja GN=glysoja_017485 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.2e-17
Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S  Q   IPDSI+ L+NLEE+N SSNLL SLPD+IGLLQKLKLLNVSGNKL ALPD+ICQ
Sbjct: 48  STNQLSAIPDSIAGLQNLEELNLSSNLLESLPDSIGLLQKLKLLNVSGNKLTALPDSICQ 107

Query: 75  CR 77
           CR
Sbjct: 108 CR 109

[Close]

BLAST of CmoCh11G000710 vs. TrEMBL
Match: I1JXB6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G188000 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.2e-17
Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S  Q   IPDSI+ L+NLEE+N SSNLL SLPD+IGLLQKLKLLNVSGNKL ALPD+ICQ
Sbjct: 235 STNQLSAIPDSIAGLQNLEELNLSSNLLESLPDSIGLLQKLKLLNVSGNKLTALPDSICQ 294

Query: 75  CR 77
           CR
Sbjct: 295 CR 296

[Close]

BLAST of CmoCh11G000710 vs. TrEMBL
Match: A0A0S3RFK4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G235800 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.9e-17
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S  Q   IPDSI+ L+NLEE+N SSNLL SLPD+IGLLQKLKLLNVSGNKL ALPDTIC 
Sbjct: 233 SANQLSAIPDSIAGLQNLEELNLSSNLLESLPDSIGLLQKLKLLNVSGNKLTALPDTICH 292

Query: 75  CR 77
           CR
Sbjct: 293 CR 294

[Close]

BLAST of CmoCh11G000710 vs. TrEMBL
Match: A0A0L9UC37_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g066800 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.9e-17
Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S  Q   IPDSI+ L+NLEE+N SSNLL SLPD+IGLLQKLKLLNVSGNKL ALPDTIC 
Sbjct: 233 SANQLSAIPDSIAGLQNLEELNLSSNLLESLPDSIGLLQKLKLLNVSGNKLTALPDTICH 292

Query: 75  CR 77
           CR
Sbjct: 293 CR 294

[Close]

BLAST of CmoCh11G000710 vs. TAIR10
Match: AT5G05850.1 (AT5G05850.1 plant intracellular ras group-related LRR 1)

HSP 1 Score: 76.6 bits (187), Expect = 9.1e-15
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 1


Query: 16  NGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQC 75
           N Q   IPDSI+ L NL E++ S+N L +LPD+IGLL KLK+LNVS NKL  LPD+IC C
Sbjct: 236 NNQLQAIPDSIAGLHNLLELDVSTNFLETLPDSIGLLSKLKILNVSCNKLTTLPDSICHC 295

[Close]

BLAST of CmoCh11G000710 vs. TAIR10
Match: AT3G11330.1 (AT3G11330.1 plant intracellular ras group-related LRR 9)

HSP 1 Score: 74.7 bits (182), Expect = 3.4e-14
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           SN +   IPDSI+ L +L E++ S+N L +LPD+IGLL KLK+LNVS NKL +LPD+IC+
Sbjct: 229 SNNKLESIPDSIAGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNKLTSLPDSICR 288

Query: 75  C 76
           C
Sbjct: 289 C 289

[Close]

BLAST of CmoCh11G000710 vs. TAIR10
Match: AT1G12970.1 (AT1G12970.1 plant intracellular ras group-related LRR 3)

HSP 1 Score: 71.2 bits (173), Expect = 3.8e-13
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S      +PD+IS LE LEE++ SSN L  LPD+IGLL  L++LNV+GNKL  LP++I Q
Sbjct: 192 SRNNLRFLPDTISGLEKLEELDLSSNRLVFLPDSIGLLLNLRILNVTGNKLTLLPESIAQ 251

Query: 75  CR 77
           CR
Sbjct: 252 CR 253

[Close]

BLAST of CmoCh11G000710 vs. TAIR10
Match: AT3G26500.1 (AT3G26500.1 plant intracellular ras group-related LRR 2)

HSP 1 Score: 68.6 bits (166), Expect = 2.5e-12
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S      IPD+IS L+ LEE++ SSN L SLPD+IG+L  L++LNV+ N L ALP++I  
Sbjct: 191 SGNDLTFIPDAISKLKKLEELDVSSNSLESLPDSIGMLLNLRILNVNANNLTALPESIAH 250

Query: 75  CR 77
           CR
Sbjct: 251 CR 252

[Close]

BLAST of CmoCh11G000710 vs. TAIR10
Match: AT5G07910.1 (AT5G07910.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-08
Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 1


Query: 22  IPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQC 76
           +PD +  L  LE+++ S N+L  LPDTIG L+ L LLNVS N+L +LP+++  C
Sbjct: 106 LPDELGQLVRLEQLSISRNMLIYLPDTIGSLRNLLLLNVSNNRLKSLPESVGSC 159

[Close]

BLAST of CmoCh11G000710 vs. NCBI nr
Match: gi|449440622|ref|XP_004138083.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 9 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-19
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S+ Q  IIPDSIS LENLEE+NASSNLL SLPD+IGLLQKLKLLNVS NKLHALPDTIC 
Sbjct: 248 SSNQLQIIPDSISGLENLEELNASSNLLESLPDSIGLLQKLKLLNVSANKLHALPDTICH 307

Query: 75  CR 77
           CR
Sbjct: 308 CR 309

[Close]

BLAST of CmoCh11G000710 vs. NCBI nr
Match: gi|700208431|gb|KGN63527.1| (hypothetical protein Csa_1G003450 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-19
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S+ Q  IIPDSIS LENLEE+NASSNLL SLPD+IGLLQKLKLLNVS NKLHALPDTIC 
Sbjct: 248 SSNQLQIIPDSISGLENLEELNASSNLLESLPDSIGLLQKLKLLNVSANKLHALPDTICH 307

Query: 75  CR 77
           CR
Sbjct: 308 CR 309

[Close]

BLAST of CmoCh11G000710 vs. NCBI nr
Match: gi|659129053|ref|XP_008464504.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 9-like [Cucumis melo])

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-19
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S+ Q  IIPDSIS LENLEE+NASSNLL SLPD+IGLLQKLKLLNVS NKLHALPDTIC 
Sbjct: 247 SSNQLQIIPDSISGLENLEELNASSNLLESLPDSIGLLQKLKLLNVSANKLHALPDTICH 306

Query: 75  CR 77
           CR
Sbjct: 307 CR 308

[Close]

BLAST of CmoCh11G000710 vs. NCBI nr
Match: gi|828314407|ref|XP_012571756.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 9-like [Cicer arietinum])

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-17
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S  Q   IPDSI+ LENLEE+N SSNLL SLPD+IGLLQ+LKLLNVSGNKL ALPDTICQ
Sbjct: 239 SANQLLAIPDSIARLENLEELNLSSNLLESLPDSIGLLQRLKLLNVSGNKLTALPDTICQ 298

Query: 75  CR 77
           CR
Sbjct: 299 CR 300

[Close]

BLAST of CmoCh11G000710 vs. NCBI nr
Match: gi|356508718|ref|XP_003523101.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 9-like [Glycine max])

HSP 1 Score: 96.3 bits (238), Expect = 3.1e-17
Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 1


Query: 15  SNGQCYIIPDSISSLENLEEMNASSNLLGSLPDTIGLLQKLKLLNVSGNKLHALPDTICQ 74
           S  Q   IPDSI+ L+NLEE+N SSNLL SLPD+IGLLQKLKLLNVSGNKL ALPD+ICQ
Sbjct: 235 STNQLSAIPDSIAGLQNLEELNLSSNLLESLPDSIGLLQKLKLLNVSGNKLTALPDSICQ 294

Query: 75  CR 77
           CR
Sbjct: 295 CR 296

The following BLAST results are available for this feature:

BLAST of CmoCh11G000710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PIRL1_ARATH	1.6e-13	61.67	Plant intracellular Ras-group-related LRR protein 1 OS=Arabidopsis thaliana GN=P...	[more]
PIRL9_ARATH	6.1e-13	59.02	Plant intracellular Ras-group-related LRR protein 9 OS=Arabidopsis thaliana GN=P...	[more]
PIRL2_ORYSJ	8.0e-13	58.06	Plant intracellular Ras-group-related LRR protein 2 OS=Oryza sativa subsp. japon...	[more]
PIRL3_ARATH	6.7e-12	56.45	Plant intracellular Ras-group-related LRR protein 3 OS=Arabidopsis thaliana GN=P...	[more]
PIRL3_ORYSJ	8.8e-12	53.23	Plant intracellular Ras-group-related LRR protein 3 OS=Oryza sativa subsp. japon...	[more]

BLAST of CmoCh11G000710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRY9_CUCSA	8.0e-20	83.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003450 PE=4 SV=1	[more]
A0A0B2RG83_GLYSO	2.2e-17	77.42	Protein lap1 (Fragment) OS=Glycine soja GN=glysoja_017485 PE=4 SV=1	[more]
I1JXB6_SOYBN	2.2e-17	77.42	Uncharacterized protein OS=Glycine max GN=GLYMA_04G188000 PE=4 SV=1	[more]
A0A0S3RFK4_PHAAN	4.9e-17	77.42	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G235800 PE=...	[more]
A0A0L9UC37_PHAAN	4.9e-17	77.42	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g066800 PE=4 SV=1	[more]

BLAST of CmoCh11G000710 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05850.1	9.1e-15	61.67	plant intracellular ras group-related LRR 1	[more]
AT3G11330.1	3.4e-14	59.02	plant intracellular ras group-related LRR 9	[more]
AT1G12970.1	3.8e-13	56.45	plant intracellular ras group-related LRR 3	[more]
AT3G26500.1	2.5e-12	53.23	plant intracellular ras group-related LRR 2	[more]
AT5G07910.1	1.3e-08	48.15	Leucine-rich repeat (LRR) family protein	[more]

BLAST of CmoCh11G000710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440622\|ref\|XP_004138083.1\|	1.1e-19	83.87	PREDICTED: plant intracellular Ras-group-related LRR protein 9 [Cucumis sativus]	[more]
gi\|700208431\|gb\|KGN63527.1\|	1.1e-19	83.87	hypothetical protein Csa_1G003450 [Cucumis sativus]	[more]
gi\|659129053\|ref\|XP_008464504.1\|	1.1e-19	83.87	PREDICTED: plant intracellular Ras-group-related LRR protein 9-like [Cucumis mel...	[more]
gi\|828314407\|ref\|XP_012571756.1\|	1.8e-17	79.03	PREDICTED: plant intracellular Ras-group-related LRR protein 9-like [Cicer ariet...	[more]
gi\|356508718\|ref\|XP_003523101.1\|	3.1e-17	77.42	PREDICTED: plant intracellular Ras-group-related LRR protein 9-like [Glycine max...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0006855	drug transmembrane transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0015238	drug transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G000710.1	CmoCh11G000710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 52..75 score: 0.015coord: 29..51 score:
None	No IPR available	PANTHER	PTHR23155	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 15..76 score: 6.1
None	No IPR available	PANTHER	PTHR23155:SF516	PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1-RELATED	coord: 15..76 score: 6.1
None	No IPR available	SMART	SM00364	LRR_bac_2	coord: 29..48 score: 1.6coord: 52..71 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G000710	Lsi06G015970	Bottle gourd (USVL1VR-Ls)	cmolsiB126
CmoCh11G000710	Cp4.1LG04g15680	Cucurbita pepo (Zucchini)	cmocpeB129
CmoCh11G000710	Cp4.1LG18g08600	Cucurbita pepo (Zucchini)	cmocpeB109
CmoCh11G000710	MELO3C026254.2	Melon (DHL92) v3.6.1	cmomedB114
CmoCh11G000710	Cla97C06G127100	Watermelon (97103) v2	cmowmbB123
CmoCh11G000710	Bhi02G000461	Wax gourd	cmowgoB0148
CmoCh11G000710	Carg20200	Silver-seed gourd	carcmoB1403
CmoCh11G000710	Carg10314	Silver-seed gourd	carcmoB0494

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh11G000710	CmoCh10G000970	Cucurbita moschata (Rifu)	cmocmoB039

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G000710	Cucurbita pepo (Zucchini)	cmocpeB128
CmoCh11G000710	Bottle gourd (USVL1VR-Ls)	cmolsiB128
CmoCh11G000710	Cucumber (Gy14) v2	cgybcmoB028
CmoCh11G000710	Cucumber (Gy14) v2	cgybcmoB042
CmoCh11G000710	Melon (DHL92) v3.6.1	cmomedB117
CmoCh11G000710	Melon (DHL92) v3.6.1	cmomedB089
CmoCh11G000710	Silver-seed gourd	carcmoB0503
CmoCh11G000710	Silver-seed gourd	carcmoB0590
CmoCh11G000710	Silver-seed gourd	carcmoB0669
CmoCh11G000710	Cucumber (Chinese Long) v3	cmocucB0091
CmoCh11G000710	Cucumber (Chinese Long) v3	cmocucB0105
CmoCh11G000710	Watermelon (97103) v2	cmowmbB141
CmoCh11G000710	Wax gourd	cmowgoB0132
CmoCh11G000710	Cucurbita moschata (Rifu)	cmocmoB079
CmoCh11G000710	Cucurbita moschata (Rifu)	cmocmoB093
CmoCh11G000710	Cucurbita moschata (Rifu)	cmocmoB101
CmoCh11G000710	Cucurbita moschata (Rifu)	cmocmoB123
CmoCh11G000710	Cucumber (Gy14) v1	cgycmoB0578
CmoCh11G000710	Cucumber (Gy14) v1	cgycmoB0581
CmoCh11G000710	Cucurbita maxima (Rimu)	cmacmoB069
CmoCh11G000710	Cucurbita maxima (Rimu)	cmacmoB114
CmoCh11G000710	Cucurbita maxima (Rimu)	cmacmoB120
CmoCh11G000710	Cucurbita maxima (Rimu)	cmacmoB390
CmoCh11G000710	Wild cucumber (PI 183967)	cmocpiB079
CmoCh11G000710	Wild cucumber (PI 183967)	cmocpiB101
CmoCh11G000710	Cucumber (Chinese Long) v2	cmocuB076
CmoCh11G000710	Cucumber (Chinese Long) v2	cmocuB099
CmoCh11G000710	Melon (DHL92) v3.5.1	cmomeB108
CmoCh11G000710	Melon (DHL92) v3.5.1	cmomeB109
CmoCh11G000710	Watermelon (Charleston Gray)	cmowcgB119
CmoCh11G000710	Watermelon (97103) v1	cmowmB128