CmoCh10G012680 (gene) Cucurbita moschata (Rifu)

NameCmoCh10G012680
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr10 : 13062594 .. 13065298 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATTCCTGAGATACTTTGTTGTCGTGGTAATCCATTAAGTTCCTAGGGGAAGGTTAAGTCTAGCTAGAGCGACTTGTCGTTCCTAACATCAAATCCCTAGGCTTATCATAGTAATGGGCCATAGAAAATAACAGAGTGTGCATACAACCATCGTCTAACATCATACTATATAATTCATGCAAATTAGACACGCAGGCTCAAGGGGGCGATGGCCTCCATCAAGCACCTAGAATGCGAAGTTCACGCTCAATGGGGCGAAGTCATCCATCAAGCACCCAGAACGCAGAATACGCAATTCCAACATGAATTAACACATGCAAACGTACAACGGAAATTAAAAGCATGATCGCACGCTCAAATAATTCACCCAAAACTTCTCATAATATTACACATCATCAGCTCATAACAATTATTCACAAGAGGCTACCACCTAAGGCGAATAACTAGCATGCATACAGTCCAAGCGAATCCTACAAGTATTTCTTCCTAAACACCGAGTGGTGACTTACCTGGTTGATGCGTGCCCTTTTGCTATCGTTTTTTTGCCCGTGAGGTGTCCAAAAATACTGATTTTCTTCAATTAGGTCTTTATTCACATAAAAACAGTATTAGAACTGGAATCGGGACAACAATCGGGCAAACAGAGGACAAACAGGCCAAAACGACCGTTCTCACGCGCGAGGAAGTGCACCAGTTACAGACCGCACGTGCGATTGCTTCTACGCAGTTGCGGGTTAGACAGTCCGGTTCGGCTTGGGGTTTGCAGGCGACACGTGTCGTCATCTCACTGGGGATGCGTTGCTCCAGCCGCGATGATGCATGTCTGGTGCCTGCCGTGCCGCCCTCTGCCGCTCCCTGGCCGACGCAGTCTTTTTTTTCTCTCTCTCCTCTGCAATCCGTAACACAGAGTCACATTTTCGATTTACATATCTTTTGGTTTGGAGTTCGGATCGAGATGATTTCTTCGGCATGGTATTTTTTTTGTAATTTTTTAGCTTAACTACCAGACGAGTTAAGAGCATCGGAAGTTCACTTACCGTTCTCAGACGATTCTCAGATCTCCACCTTCAGATTCAGATTTCGGCCAAACTTCTTCACAGATTGTGCGTAGAGTTGTTCTTAGATGAATATCTCAACATTTTAGGTCTCGATTCATATAGGAAAAGCTCATATCTGAAAAATGTCGTTCAGAACCTTACCTCACGAAACGTTCTTGGATCTTGATGGAGCATTGGCCTCGCTAGCCTCTCAGTCCTTGTACAGGTCTCGTCTGAAGGTGGATTCCGACGGTGGTTTGATGAACTTCGCAACGACTCTTTTCTGTTTCCTCTCAATTTTCTCTCTAACTTTCTTTTTCTTTTGCAGGAGATTTGATGGGGTTTTCCTTGAACCCCTATTATGGCTGGAGGGGCAAAATGACACATTTTTGCCCCTCTGTTGACTTAGCCCCTCCCCCCCTCTTTTTTTTGGCGTTACAAACTCTCCCCTTAGGAACTTTCGTCCCTGAAAGTGGATATCCCTTGAAAGAGTTCGGGATAAGCTCTCCTCACGTCCTCTTCTCGTTCCCAGGTTGCCTCTTCCTCACGGTGGTTACTCCATGAGACCTTAACCAAGGGAATAACTTTGTTGCGCAATCGCCTAGTGTCTCGAGCCAAAATTTTATTAGGCTTTTCCTCGTAAGACAGATCTTCCCGAAGAGGCAGCGTCTTGTGCTCGATTACATGGGTAGGGTCTAGAGTGTACTTCCGTAGCATGGATACAGGAAACACATTGTGTACAGCGGCAAGGCTCGGTGGCAGGGCAATTCTGTAAGCCACAGCCCTGTTAAATAAAAGCCATGCCTTATTTAGTTACATCTTAATTCACGCGAATGGAGAAGCGTGATTCTAGGAGCCATTGTTTTGGCAATTTGGGCGAAGTCTTCGTCCACTTCTTCTATTTTTGTATATTTGTTTTTTCTATTTTTGTAATTAGATTTGTTATTTAAACCGTTCAACTGAAGTAAAATAAAAACATCGAGTCTTCAGGAATCTCTTACTCTCTCTCCTTTTACTTCCGCTAATTTTTCCTTCGAAGAAACCTTCGGCAAATTTTTCGTCGACACTGTCTTCCGAATTGCTAGAGTCAACAAGTGGTATCAGAGCCTCGTTGAAGCGATCGGTAGTATACCATCACAGAAGAGCCAACCTATCAACAATCAAGTTGAATGGCTCAAGTGGTTAGAGTGTCTACCTAACAACACACAGGTCTCAGGTTCGAGTAGAAGAAAATGCAAAGGGCGAAAATAAGCAAATCGTGGGGTCCATCCCGAGCAAGCTCCGCTCACTCCTCCACGCCGCCGTCAAGTGCCGGCATCTCCATCACCACAACGAAGAGGCCGACGTCGTGATGACGGGCGTCGAGTTGTCGTTGAGCGAGTGGGCCTTGTTGATGTTGACCGCCGTCGTTCAGTACCTGATGTTGACAAGGTCCAACTACAACGAGTGGGCCTTGTTGATGCGCGTCAACCTACAGGCGCAAGGGCCGTCTACTCTGTCCCACGGGCGCACGCGCGGGAAAGATGGGAATCAAAAGAAGGAGTCGACCAATGGCTCCGTCGTCGAGATCGAAGGGCGCGGCACCATCCTGTTCATCAGTAAGGGAGGAGGCGAGCATCGCAAGCTGACCGACGTTCTACTTCATCCCGATGCTCAAGGTTAA

mRNA sequence

ATGAACATTCCTGAGATACTTTGTTGTCGTGGTCTTTATTCACATAAAAACAGTATTAGAACTGGAATCGGGACAACAATCGGGCAAACAGAGGACAAACAGGCCAAAACGACCGTTCTCACGCGCGAGGAAGTGCACCAGTTACAGACCGCACGTGCGATTGCTTCTACGCAGTTGCGGGTTAGACAGTCCGGTTCGGCTTGGGGTTTGCAGGCGACACGTGTCGTCATCTCACTGGGGATGCGTTGCTCCAGCCGCGATGATGCATGTCTGGTGCCTGCCGTGCCGCCCTCTGCCGCTCCCTGGCCGACGCAGTCTTTTTTTTCTCTCTCTCCTCTGCAATCCGTAACACAGAGTCACATTTTCGATTTACATATCTTTTGGTTTGGAGTTCGGATCGAGATGATTTCTTCGGCATGAACCTTACCTCACGAAACGTTCTTGGATCTTGATGGAGCATTGGCCTCGCTAGCCTCTCAGTCCTTGTACAGGTCTCGTCTGAAGGTGGATTCCGACGGTGGGTCTAGAGTGTACTTCCGTAGCATGGATACAGGAAACACATTGTGTACAGCGGCAAGGCTCGGTGGCAGGGCAATTCTGTCTCAGGTTCGAGTAGAAGAAAATGCAAAGGGCGAAAATAAGCAAATCGTGGGGTCCATCCCGAGCAAGCTCCGCTCACTCCTCCACGCCGCCGTCAAGTGCCGGCATCTCCATCACCACAACGAAGAGGCCGACGTCGTGATGACGGGCGTCGAGTTGTCGTTGAGCGAGTGGGCCTTGTTGATGTTGACCGCCGTCGTTCAGTACCTGATGTTGACAAGGTCCAACTACAACGAGTGGGCCTTGTTGATGCGCGTCAACCTACAGGCGCAAGGGCCGTCTACTCTGTCCCACGGGCGCACGCGCGGGAAAGATGGGAATCAAAAGAAGGAGTCGACCAATGGCTCCGTCGTCGAGATCGAAGGGCGCGGCACCATCCTGTTCATCAGTAAGGGAGGAGGCGAGCATCGCAAGCTGACCGACGTTCTACTTCATCCCGATGCTCAAGGTTAA

Coding sequence (CDS)

ATGGATACAGGAAACACATTGTGTACAGCGGCAAGGCTCGGTGGCAGGGCAATTCTGTCTCAGGTTCGAGTAGAAGAAAATGCAAAGGGCGAAAATAAGCAAATCGTGGGGTCCATCCCGAGCAAGCTCCGCTCACTCCTCCACGCCGCCGTCAAGTGCCGGCATCTCCATCACCACAACGAAGAGGCCGACGTCGTGATGACGGGCGTCGAGTTGTCGTTGAGCGAGTGGGCCTTGTTGATGTTGACCGCCGTCGTTCAGTACCTGATGTTGACAAGGTCCAACTACAACGAGTGGGCCTTGTTGATGCGCGTCAACCTACAGGCGCAAGGGCCGTCTACTCTGTCCCACGGGCGCACGCGCGGGAAAGATGGGAATCAAAAGAAGGAGTCGACCAATGGCTCCGTCGTCGAGATCGAAGGGCGCGGCACCATCCTGTTCATCAGTAAGGGAGGAGGCGAGCATCGCAAGCTGACCGACGTTCTACTTCATCCCGATGCTCAAGGTTAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025314DUF4219
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G012680.1CmoCh10G012680.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025314Domain of unknown function DUF4219PFAMPF13961DUF4219coord: 91..111
score: 9.

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None