CmoCh10G012020 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh10G012020
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionV-type proton ATPase subunit F
LocationCmo_Chr10 : 11764975 .. 11771192 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAATCTATATGTAATTTAATAAATAATACATAAATTATTATTTGAAGGTAAAAATTGCTGTAGAAAAAAAAGAAAGAAAAGAAAAAGAAAAAAAGGATAGAAAAGAAGTGCTTGGAATTTCTAAGATCCGAAATTGGATTTGCAGACAATCGAGTAGAAAGCTCCGATTCCGACGAACAAAAGTCCTCCGACAACAACTCCGGCTTCAAGGTACTTGTTCTATCTCGATTCCTCTTCCTCCTCTCCCTTCTTCGCCCGATCTTGGATCCTAGCTTCACTCACTCTTTTACTTCCGATTTTCATCAACAATCTTTGAGTTTCAGTGCTAAGATTGCTCTCAATTATTGCCCTAAACCCCCATTGTTCAATTTCTGAGCTGTAGATTTCCGATCTCACGGATTTCAGTTTCGTTTCTTCGTTTATTTCAGTTCTTTGTTGGAGATTTGATTCCATTTGGGATAACTTTCCCCGCCCCTGATCCCGCTTAATTTGATTGGGATTTTCAGTTCAAACTGTTCGTTTGTTATTCAAATATTTTTCGTGTTTTGATGATTGGGATTAGTAGTATAATTGTTTATAATCTTTTTCGTAGCTACATCTCGCAAATGGCTGGTAAAGCTCAAATTCCTACCAAGAATTCGGCGCTTATTTCTATGATTGCTGATGAGGTACGCTCAGTATATATCCATGTTGCAACAGCTTTTCTGGTTACCTTAAACTATTAAAATGAATGGAGGTTCAATAGGAGTTCTTATTACGTACGTATTTGATCTCATTGTTATGTGATTTTGGTGTTTGGTTTTCTTTTTACAGATAAATGACCTACTTATATGATCTTATTGTTTTGTCATATTGATTGAATTACCTTGTAAACCTAGTGAGATCCCATATCGGTTAGAGAGGAGAACAAAATAGCCTTTATAAGGGTGTAGAAATCTCTCCCTAGTAGATGCGTTTTAAAATCCGTGAGGGGAAGTCTAAAAGGGAAAGCCCAAAGAGGATAATATATGCTAGCGGTGGGTTTGGGCTGTTACAAATGGTATTAGAGCCAGACACCGGGCGATGTGCCAATGAGGAGGTCGAGCCCTGAATGGGGGTGGACAGGAGGCGGTGTGCCAGCAAGAACGCTAGCCTTAAATGGGGTGGATTGGGGGTCCCACATCGATTGGAGAAGGGAACGAGTGCCAGCGAGGACGCTAGGCCCCAAAGGGTGGTGGATTGTGAGGTCACACATCGGTTGGGGAGGAGAACGAAACAACCTTTATAAGAGTGTGGAAACCTCTCCCTATCAGATGCGTTTTAAAAACCTTGAGGGGAAGTTCGAAAGGGAAAGTCCAAAGAGGACAATATTTGCTAGCGGTGGACTTGGGCTGTTACAAATGGTATCAGAGCCAAACACCTGGCGAAGTGCCAGCGAGGAGGCTGAGCCCTGAATGGGGGTGAACACGAGGCGATGTGCCAGCAAAGACGCTGGTCCCAAATGGGGGTGGATTGTGAGATCTCACATCGGTTGGGGAGGAGAACGAAACAACCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACGCGTTTAGAAAAACCTCGAGGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGATAATATCTGCTAGCGGTGGGCTTGAGCTGTTACAACCCATGTCTTAATACATTTTACATGTATTTTGTCGAAGAAAATCTGCTTGTTAATCACGTTTGCATAAGTAGTTTGTCTCCAAGAGTTAACTTCAGTTAATTGCAACTGACAAGGCATAATTAAGCATCTGGATAATGATATGATTGGGTTCAGTTCATTCTGTTGCGTTGTTCATCATGAACTATGCAGGGTGTTGGTTGTATGTTTAAACTAAATTTTCTTCATAATAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTACGAAGAAAAACTAATTACCTTATAGTCGATTCAAGTAAGTATCCCTCTGATCCTATTGCTTGTAACTCTGATTTTATTTTTCACGTGTAACTCCGACGTCCTATTTCATTAGGCTCACGCTACAACTGCGTGTCTAAATCCTGTGAAACGCCCAATTGCTGAAATCCTTGTTATTTAGATTTTCCAAAATTTGGTGTAGTATTCCACTTTGGAACTTAATTTTCAAACAAGAGAGGAATTATTTGAACCCATGATGAAAATTGTTTGCCCCCTCCAGTTTTATGCTTTATCATTGCAAAATTTCCCTGTATAAGAGATGGAATCCCTAAACAGCTAAGTAATAATTTTTTGTTCCATATTTCACCCATAAGAATATTAAATGGCTAAAATGCTGAATTTCTTCTTCTCAAATCTCCCACTCCAAGGCCGCCAGGGGCTGTTACTTTTTTTCAGTTGACTAGTTGGCTACCTCCTTTAGATTAGCTCTTTGGAGGTTGGATGATGGTCTACTTTTATTTGATAATTTGGAGTGAGAGGCTCTCGACTTTCTGCTCAGAGTTGTCGACAAAATAATCTGGGCTGCTTTCTCTTCTTTGTCTTCTTCTGATCGATAAATTGGAGAATTAGGCCCTTGTCTTTTTGTTCTTATTATACTTTTTCTTGCCTCTGAATTGAGTTTCTTTGATTTTGGTTGCTGGAGAATCTTCAGCCAGGGTAGTGATATACATTTCCTCTATGAGGATCTCTGTTGCTTTTTTCATATTCTGTTAGCCTAAGTAGCTCAGTGCTGTTTATAGCCCAATTTTCCTCCCTTTGATTATCCTCTAGGATTTCAGGTTGATAATAATCTTCCTCCCAACTTGACGCACTTGAGGTTGACCGCGGTTTGCACCATCCAATCGTCTTCTCCACTGTTCCATAGTGGAACGAATGGGCTCGGTTGTGTACCTGTGGACTTTTCTGCAAAGGATACTAACTAGTATTTTCTTTGGCCCCTCTAGTTCCGAAAAACATAGAGTTTTCTTTTAGGGCTCTTTTGTTGGGTATTGAGCCCTAGAAACCAAGCACAAGTAACTGGATTCAGCTTCAATTACCACTTGCATAACATAAACCAAGCACAAGCATTTGTTCGAGTATTTAATGAAGCCTCCACACACTTCACCTAACTTATTGTAAGTATCCACTTGCAATGAATGTTCTAAATTTCAACCAACCACTGTAACATGGAACCACATTCACCTTCTAAGTAGAAAAGGGCCCCAGATTTCAAATTGATTCGTATAAGGGCCTGTATTAGTCCATCCTCTGTTCATGTTGAGAAGTCTTGCAAAATCTGAGCCAAAGCATTTGAGAAGGGCCTGATCGTGGTGAATGGGTGTAACGGCCCAGATCCACCACTAGCAGGTATTGTCTTTTTTGAGTTTTCCCATTCGGACTTCCTCTCAAGACTTTAAAATGCGTCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATGGGCCTATTATGAAGTGGATTGGTAGGAACGTTTGAAGAGCTTCTTGGATCCTCTCTCGTTCATCGTTAAAGCATTACATCTTCTCGTAATAACCACAGTTTTGTTCCAATTACTTTTTTGGACTTCTTAGTTGATTGGAATTTGTGGCAAGTTCTCTGCCCTTTTCTATTTGTGGTAGTTGAGTCTTTTCTGTTGGTCTTTGTTGGGTTGTGGCTCATTGAAGTCTGTAGTTGATTCAATAAGATTCTTCTTCAAGGCCTCCGCAAATGTCTTGTGTGATACTTTTTTGTTTTTCCATAGCCTTCTGAAAAGAACAGTTTATTATCAGTCTGACAAACCTTTTCCATCCTTCTCCACTCTCACCTTGAGGGACTATGAAGTTCGAGTTTTTCCCCATATTCAAGACATTAGAAATCTCAATAAACTCTCTCTTGTTTGTATTTGCTGCACCCATTGGAACCCATTCTCACAGTCAGCTCTTCTGAAACATTTAAGGGACAAGGGAGTGAAGGTGTGGTCGTCTATATTATCAGCCAGCCATTGTCTCAAATATTGGTTCGAGGGAAACCCTGTACTTTTCTTCTCTGTAATCTTGTTTTTCCTTCCTTTTTGCTCCTTGTCGAAGTCCGTAGTGAAGTTCTTTCGTTCTATATTGCATTTTCTGTCTTGGAGGTCATCGTGAAGTCAAGAGGTGATGGTTGGATAAAGGTGGTCGTGGGCGTGGTCGGAGGGATAAGAGTGTCGATCATTCAGGTATAGGTAGGATGGGTGTTGCTTTGGGGGTTGGGTTGGTAGAGGAGAGAATGGAGAAAATTTCATACTCTTTGGATTTTTTTAATCTTTTGGTGACCACAATGTTGTTCTACCGCGTCAATTAGAAAGTATCACAACAAGCAAAATACTTTGAGCAATTAATTCTAGCATTTTGAATTATACAAGTGTTGGATGAACCAATGCTTAAGGGATCATGTGGGTGCTGTTCTCGACCAGTTTTCTCTTTTTAAGGACAAAAATTCAGTGAGAAATAGATATCATCCTTTGCTTATTTTTAGAAAGGATGCACCGTGCTGGGGGACTTCGAGTGATTTTCCAATCGAACCAGATCACCCCTCTCTTCCCTTCCCCTCTTAAACTAAAGGGGAACATATCGAGAGAGAATTAGATTTGGTTAGGGGTTGGTAAACAAGGTACGGAATGTCTTGTCAAATATTCAATACGATTCCACAAGATCTAGTTTCGTTCAAGTAACGAATTCTAGCCAATTGAAAGGATCTTCTGATCAATCCAGAGATCATTTCGATTCCATTAGTGATGAGGATTCAAAATATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAATGAAAGATCGATTCTTTGGGATCCTTCCTTTCTTCAAATGGAACGAACAGAGATAGAATCAGACCAATTCTCGACCAGTTTTCTTAATTTTTGTTGTTGGGATAGCTGTTTTGAATATTAATCTTGCTAATGAAGTGTATTTAAAATGTTTTCATGGATTTTAGCTCAATAGTAGTGACTGATGATGCTATGATTGAACTAAATCAGTTTTTCCTTTGCTTCTTAGGAATCTGTTCGTCTTACTCCATAGGTTTACAGAGCCACTTTGTGTGATTACACCTTTTTTCATTCATTCAAATATGCTTTTGGACTCATAATTCTGTCCCCTTTTTATGCCTCAAACGTTCGAATTGTAATGTCTCAGAGACGACCGTCAAGCAAATCGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATCAGTCAATATGTAAGTTGTTCTCTGATTACACCTTGCTATGCCTCTCCTGCCATTAGAGATATTGTTTATGGGTTCTGTTTTCTCTGTGTCATCAAACTGTGATACCATTTTTTCTTTTGAGTTTTAGGTTGCAAACATGATTAGGTTTCTGGTAGATAGCTACAACAAACCAATTCCTGCAATATTGGAGATTCCATCCAAGGATCATCCATATGACCCTGCTCATGATTCGATTCTTTCGCGTGTAAAGAACCTGTTTTCTACCGAATCGGTGGCGTCTGGGAGGCGTTAAAAAGGTATTGTAACTTATGTCCCAACTCTTTTCGAAGTCATCCACCGTTATGCTGCTCTTGGTGTTCCCTGAATTTTAATTTGTAATGATTCTATTCATATCGATCACTCGAATAAAACTCGAAAAATACATGGCAACAGAGGAGCTTGTGGATGTCTAAGCACCTTAGAATGCCATTGTTTTCTTGTACCTGAATTACATTTGATACAGTAACTTGAGGCATTGCATCTGCATGCATCTAATGTGTTCTTGGTGCATATTTGGCAAAAACCAATTGCCTCCATGATTTTCTGGTGTGTAAATCGGACCAAATTGGTTATTGGGCCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTGTATCGGAAGCTATTCCAGTAACAGGGTCGCCTTTGGTAGAGTTATTACGTGGAAGTGCCAGTGTGGGACAATCTTCCTTGACTCGTTTTTATAGTTTACACACTTTTTTATTACCTCTTCTTACTGCCGTATTTACGTCAATGCACTTCTCAATGATACATAAGCAAGGCATTTCTCGTCCTTTACACCTCGCGGTATAAAATGTGCTGTTTTATTGAATTTGGGGAACTCCTAGCAGGACATAGTTGCTCAGAGGTGTGGTATGATTTGATGATCTTTAGTACCG

mRNA sequence

ATGGTTAATCTATATAAAGCTCCGATTCCGACGAACAAAAGTCCTCCGACAACAACTCCGGCTTCAAGCTACATCTCGCAAATGGCTGGTAAAGCTCAAATTCCTACCAAGAATTCGGCGCTTATTTCTATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTACGAAGAAAAACTAATTACCTTATAGTCGATTCAAAGACGACCGTCAAGCAAATCGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATCAGTCAATATGTTGCAAACATGATTAGGTTTCTGGTAGATAGCTACAACAAACCAATTCCTGCAATATTGGAGATTCCATCCAAGGATCATCCATATGACCCTGCTCATGATTCGATTCTTTCGCGTGTAAAGAACCTGTTTTCTACCGAATCGGTGGCGTCTGGGAGGCGTTAAAAAGGTATTGTAACTTATGTCCCAACTCTTTTCGAAGTCATCCACCGTTATGCTGCTCTTGGTGTTCCCTGAATTTTAATTTGTAATGATTCTATTCATATCGATCACTCGAATAAAACTCGAAAAATACATGGCAACAGAGGAGCTTGTGGATGTCTAAGCACCTTAGAATGCCATTGTTTTCTTGTACCTGAATTACATTTGATACAGTAACTTGAGGCATTGCATCTGCATGCATCTAATGTGTTCTTGGTGCATATTTGGCAAAAACCAATTGCCTCCATGATTTTCTGGTGTGTAAATCGGACCAAATTGGTTATTGGGCCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTGTATCGGAAGCTATTCCAGTAACAGGGTCGCCTTTGGTAGAGTTATTACGTGGAAGTGCCAGTGTGGGACAATCTTCCTTGACTCGTTTTTATAGTTTACACACTTTTTTATTACCTCTTCTTACTGCCGTATTTACGTCAATGCACTTCTCAATGATACATAAGCAAGGCATTTCTCGTCCTTTACACCTCGCGGTATAAAATGTGCTGTTTTATTGAATTTGGGGAACTCCTAGCAGGACATAGTTGCTCAGAGGTGTGGTATGATTTGATGATCTTTAGTACCG

Coding sequence (CDS)

ATGGTTAATCTATATAAAGCTCCGATTCCGACGAACAAAAGTCCTCCGACAACAACTCCGGCTTCAAGCTACATCTCGCAAATGGCTGGTAAAGCTCAAATTCCTACCAAGAATTCGGCGCTTATTTCTATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTACGAAGAAAAACTAATTACCTTATAGTCGATTCAAAGACGACCGTCAAGCAAATCGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATCAGTCAATATGTTGCAAACATGATTAGGTTTCTGGTAGATAGCTACAACAAACCAATTCCTGCAATATTGGAGATTCCATCCAAGGATCATCCATATGACCCTGCTCATGATTCGATTCTTTCGCGTGTAAAGAACCTGTTTTCTACCGAATCGGTGGCGTCTGGGAGGCGTTAA
Homology
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BLAST of CmoCh10G012020 vs. Swiss-Prot
Match: VATF_ARATH (V-type proton ATPase subunit F OS=Arabidopsis thaliana GN=VHA-F PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.9e-56
Identity = 106/126 (84.13%), Postives = 121/126 (96.03%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MAG+A IP +NSALI+MIADEDTVVGFL+AGVGNVD+RRKTNYLIVDSKTTV+QIEDAFK
Sbjct: 1   MAGRATIPARNSALIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EF+ R+DIAI+++SQY+ANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDS+LSRVK LF
Sbjct: 61  EFSARDDIAIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 148 STESVA 154
           S ESV+
Sbjct: 121 SAESVS 126

[Close]
BLAST of CmoCh10G012020 vs. Swiss-Prot
Match: VATF_CAEEL (Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans GN=vha-9 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.4e-32
Identity = 64/110 (58.18%), Postives = 90/110 (81.82%), Query Frame = 1 

Query: 41  LISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMI 100
           ++++I DEDTVVGFLL GVG ++  RK NYLIVD +TTV++IE+AF  F  R+DIAI++I
Sbjct: 9   ILAVIGDEDTVVGFLLGGVGELNKARKPNYLIVDKQTTVQEIEEAFNGFCARDDIAIILI 68

Query: 101 SQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTE 151
           +Q++A MIR+ VD++ + IPA+LEIPSK+ PYDP+ DSIL+R + LF+ E
Sbjct: 69  NQHIAEMIRYAVDNHTQSIPAVLEIPSKEAPYDPSKDSILNRARGLFNPE 118

[Close]
BLAST of CmoCh10G012020 vs. Swiss-Prot
Match: VATF_DICDI (V-type proton ATPase subunit F OS=Dictyostelium discoideum GN=vatF PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 9.6e-32
Identity = 65/112 (58.04%), Postives = 88/112 (78.57%), Query Frame = 1 

Query: 39  SALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIV 98
           +AL+++I DED V GFLLAGVG  D ++  N+L+VDSKT+  +IE AFK FTTR DIAI+
Sbjct: 9   TALVAVIGDEDVVTGFLLAGVGQKDKKKNENFLVVDSKTSQAKIETAFKSFTTRNDIAII 68

Query: 99  MISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTE 151
           MI+Q VA+ IR+L+D Y++ IP ILEIPSKDHPYDP  DS++ +VK +  ++
Sbjct: 69  MITQKVADEIRYLIDEYHQVIPTILEIPSKDHPYDPKKDSVMLKVKKMTGSD 120

[Close]
BLAST of CmoCh10G012020 vs. Swiss-Prot
Match: VATF_RAT (V-type proton ATPase subunit F OS=Rattus norvegicus GN=Atp6v1f PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.4e-30
Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 1 

Query: 41  LISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMI 100
           LI++I DEDTV GFLL G+G ++  R  N+L+V+  TT+ +IED F++F  R+DI I++I
Sbjct: 7   LIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILI 66

Query: 101 SQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESV 153
           +QY+A M+R  +D++ + IPA+LEIPSK+HPYD A DSIL R K +F+ E +
Sbjct: 67  NQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118

[Close]
BLAST of CmoCh10G012020 vs. Swiss-Prot
Match: VATF_MOUSE (V-type proton ATPase subunit F OS=Mus musculus GN=Atp6v1f PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 2.4e-30
Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 1 

Query: 41  LISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMI 100
           LI++I DEDTV GFLL G+G ++  R  N+L+V+  TT+ +IED F++F  R+DI I++I
Sbjct: 7   LIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILI 66

Query: 101 SQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESV 153
           +QY+A M+R  +D++ + IPA+LEIPSK+HPYD A DSIL R K +F+ E +
Sbjct: 67  NQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118

[Close]
BLAST of CmoCh10G012020 vs. TrEMBL
Match: A0A0A0LX69_CUCSA (V-type proton ATPase subunit F OS=Cucumis sativus GN=Csa_1G611810 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.5e-63
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 148 STESVASGR 157
           STESVASGR
Sbjct: 121 STESVASGR 129

[Close]
BLAST of CmoCh10G012020 vs. TrEMBL
Match: A0A067E4V9_CITSI (V-type proton ATPase subunit F OS=Citrus sinensis GN=CISIN_1g037034mg PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.4e-60
Identity = 121/130 (93.08%), Postives = 127/130 (97.69%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MAG+AQIPTK+SALI+MIADEDTV GFLLAGVGNVDLRRKTNYLIVDSKTTVK IEDAFK
Sbjct: 1   MAGRAQIPTKSSALIAMIADEDTVTGFLLAGVGNVDLRRKTNYLIVDSKTTVKAIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EFTT+EDIAIV+ISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLF
Sbjct: 61  EFTTKEDIAIVLISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 148 STESVASGRR 158
           S ESVASGRR
Sbjct: 121 SAESVASGRR 130

[Close]
BLAST of CmoCh10G012020 vs. TrEMBL
Match: V4T9F3_9ROSI (V-type proton ATPase subunit F OS=Citrus clementina GN=CICLE_v10002833mg PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.4e-60
Identity = 121/130 (93.08%), Postives = 127/130 (97.69%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MAG+AQIPTK+SALI+MIADEDTV GFLLAGVGNVDLRRKTNYLIVDSKTTVK IEDAFK
Sbjct: 1   MAGRAQIPTKSSALIAMIADEDTVTGFLLAGVGNVDLRRKTNYLIVDSKTTVKAIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EFTT+EDIAIV+ISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLF
Sbjct: 61  EFTTKEDIAIVLISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 148 STESVASGRR 158
           S ESVASGRR
Sbjct: 121 SAESVASGRR 130

[Close]
BLAST of CmoCh10G012020 vs. TrEMBL
Match: A5B4N7_VITVI (V-type proton ATPase subunit F OS=Vitis vinifera GN=VIT_05s0062g00210 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.3e-59
Identity = 118/130 (90.77%), Postives = 127/130 (97.69%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MAG+AQIPTK+SALI+MIADEDT+ GFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGRAQIPTKSSALIAMIADEDTITGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EFTT+EDIAI++ISQYVANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDS+LSRVK LF
Sbjct: 61  EFTTKEDIAIILISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 148 STESVASGRR 158
           S ESVASGRR
Sbjct: 121 SAESVASGRR 130

[Close]
BLAST of CmoCh10G012020 vs. TrEMBL
Match: I3T175_LOTJA (V-type proton ATPase subunit F OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.2e-59
Identity = 121/130 (93.08%), Postives = 126/130 (96.92%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MA KAQI T NSALI+MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MANKAQIRTNNSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EFTTREDIAIV+ISQYVANMIRFLVDSYNKP+PAILEIPSKDHPYDPA DS+LSRVKNLF
Sbjct: 61  EFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAQDSVLSRVKNLF 120

Query: 148 STESVASGRR 158
           S+ESVASGRR
Sbjct: 121 SSESVASGRR 130

[Close]
BLAST of CmoCh10G012020 vs. TAIR10
Match: AT4G02620.1 (AT4G02620.1 vacuolar ATPase subunit F family protein)

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-57
Identity = 106/126 (84.13%), Postives = 121/126 (96.03%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MAG+A IP +NSALI+MIADEDTVVGFL+AGVGNVD+RRKTNYLIVDSKTTV+QIEDAFK
Sbjct: 1   MAGRATIPARNSALIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EF+ R+DIAI+++SQY+ANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDS+LSRVK LF
Sbjct: 61  EFSARDDIAIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 148 STESVA 154
           S ESV+
Sbjct: 121 SAESVS 126

[Close]
BLAST of CmoCh10G012020 vs. NCBI nr
Match: gi|449466929|ref|XP_004151178.1| (PREDICTED: V-type proton ATPase subunit F [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 3.6e-63
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 148 STESVASGR 157
           STESVASGR
Sbjct: 121 STESVASGR 129

[Close]
BLAST of CmoCh10G012020 vs. NCBI nr
Match: gi|1012187115|ref|XP_015969737.1| (PREDICTED: V-type proton ATPase subunit F-like [Arachis duranensis])

HSP 1 Score: 240.4 bits (612), Expect = 2.2e-60
Identity = 122/130 (93.85%), Postives = 127/130 (97.69%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MA +AQIPTKNSALI+MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MANRAQIPTKNSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EFTTREDIAIV+ISQYVANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDS+LSRVK LF
Sbjct: 61  EFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 148 STESVASGRR 158
           S ESVASGRR
Sbjct: 121 SAESVASGRR 130

[Close]
BLAST of CmoCh10G012020 vs. NCBI nr
Match: gi|1012103251|ref|XP_015957950.1| (PREDICTED: V-type proton ATPase subunit F [Arachis duranensis])

HSP 1 Score: 239.6 bits (610), Expect = 3.7e-60
Identity = 121/130 (93.08%), Postives = 127/130 (97.69%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MA +AQIPTKNSALI+MIADEDTVVGFLLAGVGNVD+RRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MANRAQIPTKNSALIAMIADEDTVVGFLLAGVGNVDIRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EFTTREDIAIV+ISQYVANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDS+LSRVK LF
Sbjct: 61  EFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 148 STESVASGRR 158
           S ESVASGRR
Sbjct: 121 SAESVASGRR 130

[Close]
BLAST of CmoCh10G012020 vs. NCBI nr
Match: gi|567880745|ref|XP_006432931.1| (hypothetical protein CICLE_v10002833mg [Citrus clementina])

HSP 1 Score: 239.2 bits (609), Expect = 4.9e-60
Identity = 121/130 (93.08%), Postives = 127/130 (97.69%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MAG+AQIPTK+SALI+MIADEDTV GFLLAGVGNVDLRRKTNYLIVDSKTTVK IEDAFK
Sbjct: 1   MAGRAQIPTKSSALIAMIADEDTVTGFLLAGVGNVDLRRKTNYLIVDSKTTVKAIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EFTT+EDIAIV+ISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLF
Sbjct: 61  EFTTKEDIAIVLISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 148 STESVASGRR 158
           S ESVASGRR
Sbjct: 121 SAESVASGRR 130

[Close]
BLAST of CmoCh10G012020 vs. NCBI nr
Match: gi|1021496452|ref|XP_016191262.1| (PREDICTED: V-type proton ATPase subunit F [Arachis ipaensis])

HSP 1 Score: 239.2 bits (609), Expect = 4.9e-60
Identity = 120/130 (92.31%), Postives = 127/130 (97.69%), Query Frame = 1 

Query: 28  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 87
           MA +AQIPTKNSALI+MIADEDTVVGFLLAGVGN+D+RRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MANRAQIPTKNSALIAMIADEDTVVGFLLAGVGNIDIRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 88  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 147
           EFTTREDIAIV+ISQYVANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDS+LSRVK LF
Sbjct: 61  EFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 148 STESVASGRR 158
           S ESVASGRR
Sbjct: 121 SAESVASGRR 130

The following BLAST results are available for this feature:
BLAST of CmoCh10G012020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VATF_ARATH1.9e-5684.13V-type proton ATPase subunit F OS=Arabidopsis thaliana GN=VHA-F PE=2 SV=1[more]
VATF_CAEEL7.4e-3258.18Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans GN=vha-9 PE=3 ... [more]
VATF_DICDI9.6e-3258.04V-type proton ATPase subunit F OS=Dictyostelium discoideum GN=vatF PE=3 SV=1[more]
VATF_RAT2.4e-3051.79V-type proton ATPase subunit F OS=Rattus norvegicus GN=Atp6v1f PE=1 SV=1[more]
VATF_MOUSE2.4e-3051.79V-type proton ATPase subunit F OS=Mus musculus GN=Atp6v1f PE=1 SV=2[more]
BLAST of CmoCh10G012020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LX69_CUCSA2.5e-6399.22V-type proton ATPase subunit F OS=Cucumis sativus GN=Csa_1G611810 PE=3 SV=1[more]
A0A067E4V9_CITSI3.4e-6093.08V-type proton ATPase subunit F OS=Citrus sinensis GN=CISIN_1g037034mg PE=3 SV=1[more]
V4T9F3_9ROSI3.4e-6093.08V-type proton ATPase subunit F OS=Citrus clementina GN=CICLE_v10002833mg PE=3 SV... [more]
A5B4N7_VITVI1.3e-5990.77V-type proton ATPase subunit F OS=Vitis vinifera GN=VIT_05s0062g00210 PE=3 SV=1[more]
I3T175_LOTJA2.2e-5993.08V-type proton ATPase subunit F OS=Lotus japonicus PE=2 SV=1[more]
BLAST of CmoCh10G012020 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02620.11.1e-5784.13 vacuolar ATPase subunit F family protein[more]
BLAST of CmoCh10G012020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449466929|ref|XP_004151178.1|3.6e-6399.22PREDICTED: V-type proton ATPase subunit F [Cucumis sativus][more]
gi|1012187115|ref|XP_015969737.1|2.2e-6093.85PREDICTED: V-type proton ATPase subunit F-like [Arachis duranensis][more]
gi|1012103251|ref|XP_015957950.1|3.7e-6093.08PREDICTED: V-type proton ATPase subunit F [Arachis duranensis][more]
gi|567880745|ref|XP_006432931.1|4.9e-6093.08hypothetical protein CICLE_v10002833mg [Citrus clementina][more]
gi|1021496452|ref|XP_016191262.1|4.9e-6092.31PREDICTED: V-type proton ATPase subunit F [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005772ATPase_V1-cplx_fsu_euk
IPR008218ATPase_V1-cplx_f_g_su
Vocabulary: Cellular Component
TermDefinition
GO:0033180proton-transporting V-type ATPase, V1 domain
Vocabulary: Molecular Function
TermDefinition
GO:0046961proton-transporting ATPase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015991ATP hydrolysis coupled proton transport
GO:0034220ion transmembrane transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0034220 ion transmembrane transport
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0033180 proton-transporting V-type ATPase, V1 domain
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G012020.1CmoCh10G012020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005772ATPase, V1 complex, subunit F, eukaryoticPANTHERPTHR13861VACUOLAR ATP SYNTHASE SUBUNIT Fcoord: 22..156
score: 3.5E
IPR005772ATPase, V1 complex, subunit F, eukaryoticTIGRFAMsTIGR01101TIGR01101coord: 38..151
score: 1.9
IPR008218ATPase, V1 complex, subunit FGENE3DG3DSA:3.40.50.10580coord: 41..147
score: 5.3
IPR008218ATPase, V1 complex, subunit FPFAMPF01990ATP-synt_Fcoord: 42..143
score: 2.9
IPR008218ATPase, V1 complex, subunit FunknownSSF159468AtpF-likecoord: 42..145
score: 7.46
NoneNo IPR availablePANTHERPTHR13861:SF4SUBFAMILY NOT NAMEDcoord: 22..156
score: 3.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh10G012020CmaCh10G011230Cucurbita maxima (Rimu)cmacmoB067
CmoCh10G012020Cla005192Watermelon (97103) v1cmowmB044
CmoCh10G012020ClCG03G017370Watermelon (Charleston Gray)cmowcgB051
CmoCh10G012020Lsi06G001090Bottle gourd (USVL1VR-Ls)cmolsiB062
CmoCh10G012020Cla97C03G067740Watermelon (97103) v2cmowmbB054
CmoCh10G012020Bhi02G001727Wax gourdcmowgoB0084
CmoCh10G012020Carg27373Silver-seed gourdcarcmoB0162
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh10G012020Melon (DHL92) v3.6.1cmomedB063
CmoCh10G012020Silver-seed gourdcarcmoB0345
CmoCh10G012020Cucumber (Chinese Long) v3cmocucB0058
CmoCh10G012020Watermelon (97103) v2cmowmbB047
CmoCh10G012020Wax gourdcmowgoB0073
CmoCh10G012020Cucurbita moschata (Rifu)cmocmoB040
CmoCh10G012020Cucumber (Gy14) v1cgycmoB0517
CmoCh10G012020Cucurbita maxima (Rimu)cmacmoB101
CmoCh10G012020Wild cucumber (PI 183967)cmocpiB055
CmoCh10G012020Cucumber (Chinese Long) v2cmocuB052
CmoCh10G012020Melon (DHL92) v3.5.1cmomeB060
CmoCh10G012020Watermelon (Charleston Gray)cmowcgB046
CmoCh10G012020Watermelon (97103) v1cmowmB038
CmoCh10G012020Cucurbita pepo (Zucchini)cmocpeB056
CmoCh10G012020Cucurbita pepo (Zucchini)cmocpeB065
CmoCh10G012020Cucumber (Gy14) v2cgybcmoB019