CmoCh10G011860 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh10G011860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	F-box protein
Location	Cmo_Chr10 : 10774855 .. 10775560 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAATGAGTACTTCGAACTCCCCAAAGATGAATTCAAAGGGAATTGTTTTACTTGCTTCTATGGATTTGGATTTTGTCCGAAAACAAAGCAATACAAAGTAGTAAGAAGCTTTACTGTTCGTGATAGAAACTCTATCGTCCATAACTACAAAACAGAGATTTTTGCCTTTGGGACCCGGCCGGAATGGACGCGTATTGAGTCACCGACTTATTCTTTTAATGGATGTCATGGTGTTTACTCAAACGGAGGGCTGCATTGGATTGGACAAAATAATCTTGGTCGGGATGTTATTTATCGTCTAAATATGGAAGATGAGAAATACGTGCAGATTCCTTTTCCTAATGATGACGGTTATTTTCCTTGTATTGCAATATTTAACGGTGCAATTCATTTAACTCTTTCTATGGAGGAGTACGAGTATAGAGTGTGGAAGATGAAAGAAGATGGTTCGTGGATTAAAGCATTTAGTGTCATCGCACCAGATATCAATAAAAATATACTTTCCTTCTCAAAATCGACCGTGGAACAGATTAAAATATGTAAAGATGGAAGGATCCTGTGTCTTTGGGCTGGAGTTGAATTAGTATTGTATAATCCGACGACCAAGAAGATGGAGAAGTTAATAGATGATACAACTGTGAGAGATTTTTCAGTTCACAGCATTGATTGTTTTAATTTTAATGCTCTTCCAGATATGTTAA

mRNA sequence

ATGACGAATGAGTACTTCGAACTCCCCAAAGATGAATTCAAAGGGAATTGTTTTACTTGCTTCTATGGATTTGGATTTTGTCCGAAAACAAAGCAATACAAAGTAGTAAGAAGCTTTACTGTTCGTGATAGAAACTCTATCGTCCATAACTACAAAACAGAGATTTTTGCCTTTGGGACCCGGCCGGAATGGACGCGTATTGAGTCACCGACTTATTCTTTTAATGGATGTCATGGTGTTTACTCAAACGGAGGGCTGCATTGGATTGGACAAAATAATCTTGGTCGGGATGTTATTTATCGTCTAAATATGGAAGATGAGAAATACGTGCAGATTCCTTTTCCTAATGATGACGGTTATTTTCCTTGTATTGCAATATTTAACGGTGCAATTCATTTAACTCTTTCTATGGAGGAGTACGAGTATAGAGTGTGGAAGATGAAAGAAGATGGTTCGTGGATTAAAGCATTTAGTGTCATCGCACCAGATATCAATAAAAATATACTTTCCTTCTCAAAATCGACCGTGGAACAGATTAAAATATGTAAAGATGGAAGGATCCTGTGTCTTTGGGCTGGAGTTGAATTAGTATTGTATAATCCGACGACCAAGAAGATGGAGAAGTTAATAGATGATACAACTATATGTTAA

Coding sequence (CDS)

ATGACGAATGAGTACTTCGAACTCCCCAAAGATGAATTCAAAGGGAATTGTTTTACTTGCTTCTATGGATTTGGATTTTGTCCGAAAACAAAGCAATACAAAGTAGTAAGAAGCTTTACTGTTCGTGATAGAAACTCTATCGTCCATAACTACAAAACAGAGATTTTTGCCTTTGGGACCCGGCCGGAATGGACGCGTATTGAGTCACCGACTTATTCTTTTAATGGATGTCATGGTGTTTACTCAAACGGAGGGCTGCATTGGATTGGACAAAATAATCTTGGTCGGGATGTTATTTATCGTCTAAATATGGAAGATGAGAAATACGTGCAGATTCCTTTTCCTAATGATGACGGTTATTTTCCTTGTATTGCAATATTTAACGGTGCAATTCATTTAACTCTTTCTATGGAGGAGTACGAGTATAGAGTGTGGAAGATGAAAGAAGATGGTTCGTGGATTAAAGCATTTAGTGTCATCGCACCAGATATCAATAAAAATATACTTTCCTTCTCAAAATCGACCGTGGAACAGATTAAAATATGTAAAGATGGAAGGATCCTGTGTCTTTGGGCTGGAGTTGAATTAGTATTGTATAATCCGACGACCAAGAAGATGGAGAAGTTAATAGATGATACAACTATATGTTAA

Homology

[Close]

BLAST of CmoCh10G011860 vs. TrEMBL
Match: A0A0A0M1M5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 8.9e-43
Identity = 93/219 (42.47%), Postives = 131/219 (59.82%), Query Frame = 1


Query: 1   MTNEYFELPKDEFKGNCFTCF-YGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFG 60
           +TNEYF+LP    KG+    + YG GF P T QYK+ R+    D       +  +IFAFG
Sbjct: 139 ITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDE------FIVDIFAFG 198

Query: 61  TRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGR-------DVIYRLNMEDEKYVQI 120
           T  EWT + S     N  HGVY NGGL+W+G   L         +VIYRL+++DEK+ +I
Sbjct: 199 TSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKI 258

Query: 121 PFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFS 180
            FP D G  P IA++NG ++LT   E+++Y  WKM+ED SW K F +  P+   + L   
Sbjct: 259 SFPLDGGDDPYIAVYNGTLYLTFCCEDFDYHAWKMEEDFSWSKEFVLALPENVHHSLRHH 318

Query: 181 K--STVEQIKICKDGRILCLWAGVELVLYNPTTKKMEKL 210
                ++ IK C+DG ILCL+AG+ L+LY+P+T+ +E L
Sbjct: 319 PIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEIL 351

[Close]

BLAST of CmoCh10G011860 vs. TrEMBL
Match: A0A0A0KJY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G515480 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-33
Identity = 89/228 (39.04%), Postives = 126/228 (55.26%), Query Frame = 1


Query: 1   MTNEYFELPKDEFKGNCFT---CFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFA 60
           MTNEYF+ P ++ K +C       YG GF PKTKQYK+ R+    D ++ +     EIF 
Sbjct: 135 MTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDESTTL----VEIFT 194

Query: 61  FG-TRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRD----VIYRLNMEDEKYVQI 120
           FG T   WT +          HGVY  GGL+W+       D     IYRL++E+EK  +I
Sbjct: 195 FGSTHQVWTPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSSISAIYRLDLENEKLEKI 254

Query: 121 PFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILS-- 180
             P   G      +F+G ++LT+S    +Y+VWKMK++ SWIKAF +  P   +N+    
Sbjct: 255 SCPQYIGGHFFFGVFDGTLYLTVSKNN-KYQVWKMKDNFSWIKAFVISRP---RNLCHPD 314

Query: 181 -----FSKSTVEQIKICKDGRILCLWAGVELVLYNPTTKKMEKLIDDT 214
                +  S ++ IK C+DG+ILCL AG+ L+LY+P TK  E L D +
Sbjct: 315 HPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQS 354

[Close]

BLAST of CmoCh10G011860 vs. TrEMBL
Match: A0A068U2X8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041329001 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.4e-18
Identity = 64/209 (30.62%), Postives = 100/209 (47.85%), Query Frame = 1


Query: 22  YGFGFCPKTKQYKVVRSFTVRDRNSI-VHNYKTEIFAFGTRPE-WTRIESPTYSFNGC-- 81
           YGFG   +T++YKVVR F  R++N+  V     +++  G   E W RI    + +N C  
Sbjct: 159 YGFGSSSETRKYKVVRIFQEREKNTRRVLKSNCDVYTLGEETESWRRIGHAPFLYNSCRT 218

Query: 82  HGVYSNGGLHWIGQNNLGRDVIYRLNMEDEKYVQIPFP---NDDGYFPCIAIFNGAIHLT 141
           HGV+ NG LHW+  +  G ++I   ++E E +   P P   + D     + +F G + L 
Sbjct: 219 HGVFLNGNLHWLIGDQAGSELISCFDLETELFSPFPAPPELSKDFNLASLGLFGGCLSLC 278

Query: 142 LSMEEYEYRVWKMKEDG---SWIKAFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLW 201
            +  +YE  +W MKE G    W K   ++      +++  S   V   K+ +DG IL LW
Sbjct: 279 DNTSDYEIVIWVMKEYGITKLWTK--DIVIDKEPADLVGPSFEVVRVFKVFEDGNILLLW 338

Query: 202 AGVEL--------VLYNPTTKKMEKLIDD 213
               L        +L+     K+ K IDD
Sbjct: 339 RDDILLSYDSQRQILHQSGVHKLIKKIDD 365

[Close]

BLAST of CmoCh10G011860 vs. TrEMBL
Match: A0A0A0KSJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643290 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-17
Identity = 68/222 (30.63%), Postives = 109/222 (49.10%), Query Frame = 1


Query: 1   MTNEYFELP-KDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFG 60
           MTNE+F L  + + K    +CFYGFGF  KTKQYK+ ++    + + ++     E+  FG
Sbjct: 144 MTNEFFILSTQPKVKNEDISCFYGFGFNLKTKQYKLFKAIHDEEDSHLM----MEVMRFG 203

Query: 61  TRPE---WTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIYRLNMEDEKYVQI---- 120
              E   W  +    + F  C GVY NG ++WIG+    + VIY LN+E EK   I    
Sbjct: 204 KNEETKEWRHLTCLPFVFY-CDGVYLNGVIYWIGRQKENKSVIYSLNVETEKIESITVLK 263

Query: 121 --PFPNDDGYFPCIAIFNGAIHLTLSMEE---YEYRVWKMKEDGSWIKAFSVIAPDINKN 180
             P  N   Y   I  +NG ++ T+ +      + ++W M+    W+K F  +  DI   
Sbjct: 264 VDPSYNTSDYGYYIGKYNGNLYATIWIHGTCCKKVQLWMMQGKDCWVKEF--VVHDIEDR 323

Query: 181 ILSFSKSTVEQIKICKDGRILCLWAGVELVL-YNPTTKKMEK 209
              +  + +  +KI +DG     + G  L+L Y+ T  +++K
Sbjct: 324 ---YVDAFLVLVKIFEDGE-RWFYVGSRLILCYDKTGTQIKK 354

[Close]

BLAST of CmoCh10G011860 vs. TrEMBL
Match: A0A0A0KUJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643280 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-16
Identity = 66/200 (33.00%), Postives = 101/200 (50.50%), Query Frame = 1


Query: 1   MTNEYFELPKDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFG- 60
           MTNE+ ELP  E+  +  + +YGFGF PKTKQYK+   F V +R+        EI  FG 
Sbjct: 63  MTNEFLELPDREYDES--SPYYGFGFNPKTKQYKL---FRVTERDRYEFYSIMEIMRFGD 122

Query: 61  ---TRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRDVIYRLNMEDEKYVQIPFPN 120
              T+ EW   + P  SF+  HG Y NG ++W+G+      VIY L++E E   Q+    
Sbjct: 123 RSETKEEWRHFKCPPISFDD-HGAYLNGVIYWMGKEKGKAYVIYALDVETE---QMELVA 182

Query: 121 DDGYFPCIAIFNGAIHLTLSMEEYEY-----------RVWKMKEDGSWIKAFSVIAPDIN 180
           D    P    +NG I  TL+   Y Y           ++W M+    WI+ F V+  +++
Sbjct: 183 DLEVGPHNFRYNGYI-ATLNKSVYAYVPIVGPCCTKIQIWTMQGKEGWIREF-VMYDEVS 242

Query: 181 KNILSFSKSTVEQIKICKDG 186
           + +    +  ++ +K+ KDG
Sbjct: 243 RGL----RMPMQMVKVLKDG 247

[Close]

BLAST of CmoCh10G011860 vs. NCBI nr
Match: gi|449436028|ref|XP_004135796.1| (PREDICTED: putative F-box protein At1g46984 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 1.3e-42
Identity = 93/219 (42.47%), Postives = 131/219 (59.82%), Query Frame = 1


Query: 1   MTNEYFELPKDEFKGNCFTCF-YGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFG 60
           +TNEYF+LP    KG+    + YG GF P T QYK+ R+    D       +  +IFAFG
Sbjct: 139 ITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDE------FIVDIFAFG 198

Query: 61  TRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGR-------DVIYRLNMEDEKYVQI 120
           T  EWT + S     N  HGVY NGGL+W+G   L         +VIYRL+++DEK+ +I
Sbjct: 199 TSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDEKFEKI 258

Query: 121 PFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILSFS 180
            FP D G  P IA++NG ++LT   E+++Y  WKM+ED SW K F +  P+   + L   
Sbjct: 259 SFPLDGGDDPYIAVYNGTLYLTFCCEDFDYHAWKMEEDFSWSKEFVLALPENVHHSLRHH 318

Query: 181 K--STVEQIKICKDGRILCLWAGVELVLYNPTTKKMEKL 210
                ++ IK C+DG ILCL+AG+ L+LY+P+T+ +E L
Sbjct: 319 PIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEIL 351

[Close]

BLAST of CmoCh10G011860 vs. NCBI nr
Match: gi|659099669|ref|XP_008450717.1| (PREDICTED: putative F-box only protein 9 [Cucumis melo])

HSP 1 Score: 171.0 bits (432), Expect = 2.2e-39
Identity = 98/229 (42.79%), Postives = 135/229 (58.95%), Query Frame = 1


Query: 1   MTNEYFELPKDEFKGNCFTCF-YGFGFCPKTKQYKVVRSFTVRDRNSIVHN-YKTEIFAF 60
           +TNEYF+ P    KG+    + YG GF PKT QYK+ R+          HN +  +IFAF
Sbjct: 138 ITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTH-------FAHNEFIVDIFAF 197

Query: 61  GTRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQN----NLGRD----VIYRLNMEDEKY- 120
           GT  EWT I S     N  HGVY NGGL+W+G      N G      V+YRL++ DEK+ 
Sbjct: 198 GTSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYRLDLNDEKFK 257

Query: 121 -VQIPFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNI 180
            + IPF  D+ Y   + ++NG ++LTL  E+++Y VWKMKED SW K F +  P+   NI
Sbjct: 258 KISIPFGGDEPY---VGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPE---NI 317

Query: 181 L-SFSKS-----TVEQIKICKDGRILCLWAGVELVLYNPTTKKMEKLID 212
           L S  +       ++ +K C+DG ILCL AG+ L++Y+P T++ME L D
Sbjct: 318 LHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTD 353

[Close]

BLAST of CmoCh10G011860 vs. NCBI nr
Match: gi|449433922|ref|XP_004134745.1| (PREDICTED: F-box protein At3g07870-like [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 1.8e-33
Identity = 89/228 (39.04%), Postives = 126/228 (55.26%), Query Frame = 1


Query: 1   MTNEYFELPKDEFKGNCFT---CFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFA 60
           MTNEYF+ P ++ K +C       YG GF PKTKQYK+ R+    D ++ +     EIF 
Sbjct: 135 MTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDESTTL----VEIFT 194

Query: 61  FG-TRPEWTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRD----VIYRLNMEDEKYVQI 120
           FG T   WT +          HGVY  GGL+W+       D     IYRL++E+EK  +I
Sbjct: 195 FGSTHQVWTPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSSISAIYRLDLENEKLEKI 254

Query: 121 PFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILS-- 180
             P   G      +F+G ++LT+S    +Y+VWKMK++ SWIKAF +  P   +N+    
Sbjct: 255 SCPQYIGGHFFFGVFDGTLYLTVSKNN-KYQVWKMKDNFSWIKAFVISRP---RNLCHPD 314

Query: 181 -----FSKSTVEQIKICKDGRILCLWAGVELVLYNPTTKKMEKLIDDT 214
                +  S ++ IK C+DG+ILCL AG+ L+LY+P TK  E L D +
Sbjct: 315 HPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQS 354

[Close]

BLAST of CmoCh10G011860 vs. NCBI nr
Match: gi|659078870|ref|XP_008439950.1| (PREDICTED: putative F-box protein At3g21120 [Cucumis melo])

HSP 1 Score: 150.2 bits (378), Expect = 4.1e-33
Identity = 88/228 (38.60%), Postives = 128/228 (56.14%), Query Frame = 1


Query: 1   MTNEYFELPKDEFKGNCFT---CFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFA 60
           MTNEYF+ P ++ K +C       YG GF PK KQYK+ R+    D ++ +     EIFA
Sbjct: 135 MTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDESTTL----VEIFA 194

Query: 61  FGTRPE-WTRIESPTYSFNGCHGVYSNGGLHWIGQNNLGRD----VIYRLNMEDEKYVQI 120
           FG+  + WT +          HGVY NGGL+W+       D     IYRL++E+E   +I
Sbjct: 195 FGSIYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSISTIYRLDIENENLEKI 254

Query: 121 PFPNDDGYFPCIAIFNGAIHLTLSMEEYEYRVWKMKEDGSWIKAFSVIAPDINKNILS-- 180
             P   G      +F+G ++LT+S    +Y+VWKMK++ SWIKAF + +P   +N+    
Sbjct: 255 SCPQHLGGHFFFGVFDGTLYLTVSKNN-KYQVWKMKDNFSWIKAFVISSP---RNLCHPD 314

Query: 181 -----FSKSTVEQIKICKDGRILCLWAGVELVLYNPTTKKMEKLIDDT 214
                +  S ++ IK C+DG+ILCL AG+ L+LY+P TK  E L D +
Sbjct: 315 HPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQS 354

[Close]

BLAST of CmoCh10G011860 vs. NCBI nr
Match: gi|659066492|ref|XP_008447090.1| (PREDICTED: putative F-box protein At3g52320 [Cucumis melo])

HSP 1 Score: 102.8 bits (255), Expect = 7.5e-19
Identity = 72/234 (30.77%), Postives = 108/234 (46.15%), Query Frame = 1


Query: 1   MTNEYFELP-KDEFKGNCFTCFYGFGFCPKTKQYKVVRSFTVRDRNSIVHNYKTEIFAFG 60
           MTNEY ELP + E++ +     YG G+ PKTKQYKV R     D   +      EI AF 
Sbjct: 124 MTNEYMELPSRTEYQSSV----YGLGYSPKTKQYKVARHSFKNDELFV------EILAFD 183

Query: 61  T------------RPEWTRIE--SPTYSFNGCHGVYSNGGLHWIGQNNLGRD------VI 120
           T            + +W  +   S TY  +  HG Y NG ++W+G+            V+
Sbjct: 184 TSLADQDGNQNEVQSQWRHVVSISTTYKMHR-HGTYFNGAIYWVGEGERSDSSAKNVYVL 243

Query: 121 YRLNMEDEKYVQIPFPNDDG---YFPCIAIFNGAIHLT-LSMEEYEYRVWKMKEDGSWIK 180
           +RLN+ +EK+ ++  P       +     +FNG ++L+     +  Y V  M   G W  
Sbjct: 244 WRLNVTNEKFEELWLPEIGSIWKHTSYCGVFNGKLYLSHYVTADSMYHVLMMNGKGLWET 303

Query: 181 AFSVIAPDINKNILSFSKSTVEQIKICKDGRILCLWAGVELVLYNPTTKKMEKL 210
            F +  P   K       +  + IK  K G+ILCL+    LVL++  + K+EKL
Sbjct: 304 PFFISIPRFYKGSTRLESNHFQLIKPWKKGKILCLFYSFLLVLFDTKSGKLEKL 346

The following BLAST results are available for this feature:

BLAST of CmoCh10G011860 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh10G011860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1M5_CUCSA	8.9e-43	42.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G572960 PE=4 SV=1	[more]
A0A0A0KJY9_CUCSA	1.3e-33	39.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G515480 PE=4 SV=1	[more]
A0A068U2X8_COFCA	3.4e-18	30.62	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041329001 PE=4 SV=1	[more]
A0A0A0KSJ2_CUCSA	3.8e-17	30.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643290 PE=4 SV=1	[more]
A0A0A0KUJ1_CUCSA	1.4e-16	33.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643280 PE=4 SV=1	[more]

BLAST of CmoCh10G011860 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh10G011860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436028\|ref\|XP_004135796.1\|	1.3e-42	42.47	PREDICTED: putative F-box protein At1g46984 [Cucumis sativus]	[more]
gi\|659099669\|ref\|XP_008450717.1\|	2.2e-39	42.79	PREDICTED: putative F-box only protein 9 [Cucumis melo]	[more]
gi\|449433922\|ref\|XP_004134745.1\|	1.8e-33	39.04	PREDICTED: F-box protein At3g07870-like [Cucumis sativus]	[more]
gi\|659078870\|ref\|XP_008439950.1\|	4.1e-33	38.60	PREDICTED: putative F-box protein At3g21120 [Cucumis melo]	[more]
gi\|659066492\|ref\|XP_008447090.1\|	7.5e-19	30.77	PREDICTED: putative F-box protein At3g52320 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011044	Quino_amine_DH_bsu
IPR017451	F-box-assoc_interact_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G011860.1	CmoCh10G011860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011044	Quinoprotein amine dehydrogenase, beta chain-like	unknown	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase	coord: 63..210 score: 7.0
IPR017451	F-box associated interaction domain	TIGRFAMs	TIGR01640	TIGR01640	coord: 6..166 score: 5.5
None	No IPR available	PANTHER	PTHR31790	FAMILY NOT NAMED	coord: 2..210 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh10G011860	CmaCh10G011050	Cucurbita maxima (Rimu)	cmacmoB067
CmoCh10G011860	Bhi02G001772	Wax gourd	cmowgoB0084

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh10G011860	Cucumber (Chinese Long) v3	cmocucB0064
CmoCh10G011860	Watermelon (97103) v2	cmowmbB049
CmoCh10G011860	Wax gourd	cmowgoB0073
CmoCh10G011860	Wild cucumber (PI 183967)	cmocpiB059
CmoCh10G011860	Cucumber (Chinese Long) v2	cmocuB058
CmoCh10G011860	Melon (DHL92) v3.5.1	cmomeB063
CmoCh10G011860	Watermelon (Charleston Gray)	cmowcgB048
CmoCh10G011860	Watermelon (97103) v1	cmowmB041
CmoCh10G011860	Cucurbita pepo (Zucchini)	cmocpeB056
CmoCh10G011860	Bottle gourd (USVL1VR-Ls)	cmolsiB066
CmoCh10G011860	Cucumber (Gy14) v2	cgybcmoB022
CmoCh10G011860	Melon (DHL92) v3.6.1	cmomedB066