CmoCh10G011820 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh10G011820
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDisease resistance protein (TIR-NBS-LRR class)
LocationCmo_Chr10 : 10664734 .. 10665166 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTACGATGTGTTCATAAGTTTTAGAGGCAAAGATGTTCGCAAGAACTTCGTGGGATTTTTGCACCAAGAATTGGAGCGTTTGGGGCTAAAAGCTCTCGTAGACGAGAAAGAGTTCAAAATCGGAGAAGATCTATTCGATTTGTTCAAAATAATAGAAGAATCGAAGTTCGTGATTGTGATTCTTTCGAATAATTATGCTTCTTCCAAATGGTGTTTGAGAGAGCTTACCAAAATCATGGAGTCTATGGAAATGGCTCAAGCTCGTGCTCTTCCTGTGTTCTACCAGGTACAGCCTTCTGAAATTAGAAACCTTTCCAACCCTTTTCTTAAGAAGAAGTTTGTTAAGTTTAAAAGCTTTATGAAAGGAGTTGATGATCAAAAAATGCGAAGGAAATTGGAAGAGATTAAACGTTGGAAGAAGGCCATGA

mRNA sequence

ATGAAGTACGATGTGTTCATAAGTTTTAGAGGCAAAGATGTTCGCAAGAACTTCGTGGGATTTTTGCACCAAGAATTGGAGCGTTTGGGGCTAAAAGCTCTCGTAGACGAGAAAGAGTTCAAAATCGGAGAAGATCTATTCGATTTGTTCAAAATAATAGAAGAATCGAAGTTCGTGATTGTGATTCTTTCGAATAATTATGCTTCTTCCAAATGGTGTTTGAGAGAGCTTACCAAAATCATGGAGTCTATGGAAATGGCTCAAGCTCGTGCTCTTCCTGTGTTCTACCAGGAGTTGATGATCAAAAAATGCGAAGGAAATTGGAAGAGATTAAACGTTGGAAGAAGGCCATGA

Coding sequence (CDS)

ATGAAGTACGATGTGTTCATAAGTTTTAGAGGCAAAGATGTTCGCAAGAACTTCGTGGGATTTTTGCACCAAGAATTGGAGCGTTTGGGGCTAAAAGCTCTCGTAGACGAGAAAGAGTTCAAAATCGGAGAAGATCTATTCGATTTGTTCAAAATAATAGAAGAATCGAAGTTCGTGATTGTGATTCTTTCGAATAATTATGCTTCTTCCAAATGGTGTTTGAGAGAGCTTACCAAAATCATGGAGTCTATGGAAATGGCTCAAGCTCGTGCTCTTCCTGTGTTCTACCAGGAGTTGATGATCAAAAAATGCGAAGGAAATTGGAAGAGATTAAACGTTGGAAGAAGGCCATGA
Homology
[Close]
BLAST of CmoCh10G011820 vs. Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-18
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 1 

Query: 3   YDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDL-FDLFKIIEESKFVIV 62
           YDVF+SFRG+D RK F   L++ L   G+K   D+K  + G  +  +L K IEES+F IV
Sbjct: 12  YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71

Query: 63  ILSNNYASSKWCLRELTKIMESMEMAQARALPVFY 97
           + S NYA+S+WCL EL KIME     +   +P+FY
Sbjct: 72  VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFY 106

[Close]
BLAST of CmoCh10G011820 vs. Swiss-Prot
Match: TIR_ARATH (Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana GN=TIR PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.9e-17
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1 

Query: 2   KYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLF-DLFKIIEESKFVI 61
           KYDVF+SFRG D R NF+ FL++EL R  ++   D+KE + G+    +L   IE S+F +
Sbjct: 8   KYDVFLSFRGHDTRHNFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIEVSRFAV 67

Query: 62  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY 97
           V++S NYA+S WCL EL  IM+  +      +P+FY
Sbjct: 68  VVVSENYAASSWCLDELVTIMDFEKKGSITVMPIFY 103

[Close]
BLAST of CmoCh10G011820 vs. Swiss-Prot
Match: LAZ5_ARATH (Disease resistance protein LAZ5 OS=Arabidopsis thaliana GN=LAZ5 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 9.4e-16
Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = 1 

Query: 3   YDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVIVI 62
           + VFI+FRG D+R  F+  L   L   G+   +D +E    EDL  LFK IEES+  + I
Sbjct: 12  WQVFINFRGADLRNGFISHLAGALTSAGITYYIDTEEVP-SEDLTVLFKRIEESEIALSI 71

Query: 63  LSNNYASSKWCLRELTKIMESMEMAQARALPVFY 97
            S+NYA SKWCL EL KIME ++  + R +PVF+
Sbjct: 72  FSSNYAESKWCLDELVKIMEQVKKGKLRIMPVFF 104

[Close]
BLAST of CmoCh10G011820 vs. Swiss-Prot
Match: CSA1_ARATH (Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-15
Identity = 43/106 (40.57%), Postives = 68/106 (64.15%), Query Frame = 1 

Query: 5   VFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVIVILS 64
           VFI+FRG ++RKNFV  L + L+R G+ A +D  E ++G++L  L + IE S+  + I S
Sbjct: 19  VFINFRGVELRKNFVSHLEKGLKRKGINAFIDTDE-EMGQELSVLLERIEGSRIALAIFS 78

Query: 65  NNYASSKWCLRELTKIMESMEMAQARALPVFY--QELMIKKCEGNW 109
             Y  SKWCL+EL K+ E  E  +   +P+FY  Q + +K+ +G++
Sbjct: 79  PRYTESKWCLKELAKMKERTEQKELVVIPIFYKVQPVTVKELKGDF 123

[Close]
BLAST of CmoCh10G011820 vs. Swiss-Prot
Match: P2A05_ARATH (Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.9e-15
Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 1 

Query: 5   VFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVIVILS 64
           VFI+FRGKD+RK F+ FL   L++  +   +DE+E + G+ L  LF  I ESK  +VI S
Sbjct: 24  VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEER-GKYLISLFDTIGESKIALVIFS 83

Query: 65  NNYASSKWCLRELTKIMESMEMAQARALPVFYQ 98
             Y  S WC+ EL KI E M+  +   +P+FY+
Sbjct: 84  EGYCESHWCMDELVKIKEYMDQNRLIIIPIFYR 115

[Close]
BLAST of CmoCh10G011820 vs. TrEMBL
Match: Q5DMW4_CUCME (MRGH11 OS=Cucumis melo GN=MRGH11 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.6e-28
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 1 

Query: 1   MKYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVI 60
           M YDVFISFRG+DVR  F G+L+  L RLG+KA +D K F IG+DL DLFKII+ES+  I
Sbjct: 14  MNYDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDLHDLFKIIDESRSAI 73

Query: 61  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY--QELMIKKCEGNWK 110
           V+LS +YAS+KWCLRELTKIM+SM  +  R LPVFY     ++K   G +K
Sbjct: 74  VVLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFK 124

[Close]
BLAST of CmoCh10G011820 vs. TrEMBL
Match: A0A0A0KXU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647530 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.6e-28
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 1 

Query: 1   MKYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVI 60
           M YDVFISFRG+DVR  F G+L+  L RLG+KA +D K F IG+DL DLFKII+ES+  I
Sbjct: 81  MNYDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDLHDLFKIIDESRSAI 140

Query: 61  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY--QELMIKKCEGNWK 110
           V+LS +YAS+KWCLRELTKIM+SM  +  R LPVFY     ++K   G +K
Sbjct: 141 VVLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFK 191

[Close]
BLAST of CmoCh10G011820 vs. TrEMBL
Match: M4QSV5_CUCME (RGH11 OS=Cucumis melo GN=RGH11 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.6e-28
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 1 

Query: 1   MKYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVI 60
           M YDVFISFRG+DVR  F G+L+  L RLG+KA +D K F IG+DL DLFKII+ES+  I
Sbjct: 14  MNYDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDLHDLFKIIDESRSAI 73

Query: 61  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY--QELMIKKCEGNWK 110
           V+LS +YAS+KWCLRELTKIM+SM  +  R LPVFY     ++K   G +K
Sbjct: 74  VVLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFK 124

[Close]
BLAST of CmoCh10G011820 vs. TrEMBL
Match: A0A059C601_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02177 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19
Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 1 

Query: 3   YDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVIVI 62
           Y+VF+SFRG ++R NFV  L+Q L ++G+   +D +E K G+ +  L K IEES+  I++
Sbjct: 11  YNVFLSFRGAELRNNFVSHLYQALHQIGIYTFLDSEELKKGDKILMLMKAIEESRIAIIV 70

Query: 63  LSNNYASSKWCLRELTKIMESMEMAQARALPVFYQ 98
            S NYASSKWCL+E+TKIME  E      LPVFY+
Sbjct: 71  FSKNYASSKWCLKEVTKIMECKEQNNLIVLPVFYK 105

[Close]
BLAST of CmoCh10G011820 vs. TrEMBL
Match: G3MUE9_ROSMU (TIR-NBS-LRR resistance protein muRdr1G OS=Rosa multiflora GN=muRdr1G PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-19
Identity = 50/97 (51.55%), Postives = 71/97 (73.20%), Query Frame = 1 

Query: 2   KYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLF-DLFKIIEESKFVI 61
           KYDVF+SFRG+D RK F GFL+ EL+R G++   D+ + + G  +  +L  +IE+S+F I
Sbjct: 18  KYDVFLSFRGEDTRKGFTGFLYHELQRQGIRTFRDDPQLERGTVISPELLTVIEQSRFAI 77

Query: 62  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFYQ 98
           V+LS N+ASS WCL EL+KI+E ME  + R LP+FY+
Sbjct: 78  VVLSPNFASSTWCLLELSKILECME-ERGRILPIFYE 113

[Close]
BLAST of CmoCh10G011820 vs. TAIR10
Match: AT1G72950.1 (AT1G72950.1 Disease resistance protein (TIR-NBS class))

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-20
Identity = 44/96 (45.83%), Postives = 67/96 (69.79%), Query Frame = 1 

Query: 2   KYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLF-DLFKIIEESKFVI 61
           K+DVF+SFRG D R++F+ FL++EL R  ++   D+KE K G  +  +L + IE S+F +
Sbjct: 10  KFDVFLSFRGLDTRRSFISFLYKELIRRNIRTFKDDKELKNGRRITPELIRAIEGSRFAV 69

Query: 62  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY 97
           V++S NYA+S+WCL EL KIM+   M   + +P+FY
Sbjct: 70  VVVSVNYAASRWCLEELVKIMDFENMGSLKVMPIFY 105

[Close]
BLAST of CmoCh10G011820 vs. TAIR10
Match: AT1G72920.1 (AT1G72920.1 Toll-Interleukin-Resistance (TIR) domain family protein)

HSP 1 Score: 95.1 bits (235), Expect = 3.0e-20
Identity = 46/96 (47.92%), Postives = 65/96 (67.71%), Query Frame = 1 

Query: 2   KYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLF-DLFKIIEESKFVI 61
           KYDVF+SFRG D R+NF+ FL++EL R  ++   D+KE + G  +  +L + IEESKF +
Sbjct: 8   KYDVFLSFRGLDTRRNFISFLYKELVRRKIRTFKDDKELENGRRISPELKRAIEESKFAV 67

Query: 62  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY 97
           V++S NYA+S WCL EL KIM+         +P+FY
Sbjct: 68  VVVSVNYAASPWCLDELVKIMDFENKGSITVMPIFY 103

[Close]
BLAST of CmoCh10G011820 vs. TAIR10
Match: AT1G72940.1 (AT1G72940.1 Toll-Interleukin-Resistance (TIR) domain-containing protein)

HSP 1 Score: 93.6 bits (231), Expect = 8.7e-20
Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = 1 

Query: 2   KYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLF-DLFKIIEESKFVI 61
           KYDVF+SFRG D R+NF+ FL++E  R  ++   D+KE + G  +  +L + IEESKF +
Sbjct: 8   KYDVFLSFRGVDTRRNFISFLYKEFVRRKIRTFKDDKELENGRRISPELKRAIEESKFAV 67

Query: 62  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY 97
           V++S NYA+S WCL EL KIM+         +P+FY
Sbjct: 68  VVVSVNYAASPWCLDELVKIMDFENKGSITVMPIFY 103

[Close]
BLAST of CmoCh10G011820 vs. TAIR10
Match: AT5G45220.1 (AT5G45220.1 Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 90.5 bits (223), Expect = 7.4e-19
Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 1 

Query: 2   KYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVIV 61
           K+ VFI+FRG  +R NFVG+L   L R  +   +D +E + GEDL  LFK IE+S   IV
Sbjct: 330 KFQVFINFRGDQLRNNFVGYLVDALRRSEINVFIDNQEQR-GEDLNTLFKRIEDSGIAIV 389

Query: 62  ILSNNYASSKWCLRELTKIMESMEMAQARALPVFYQ 98
           + S+ Y  SKWCL EL KI E +     + LP+FY+
Sbjct: 390 VFSSRYTESKWCLEELVKIKERVHQGLLKVLPIFYK 424

[Close]
BLAST of CmoCh10G011820 vs. TAIR10
Match: AT1G17615.1 (AT1G17615.1 Disease resistance protein (TIR-NBS class))

HSP 1 Score: 90.5 bits (223), Expect = 7.4e-19
Identity = 42/96 (43.75%), Postives = 63/96 (65.62%), Query Frame = 1 

Query: 2   KYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLF-DLFKIIEESKFVI 61
           K+DVF+SFRGKD R+ F+ FL++EL  +G++   D+ E + G  +  DL   IE SK  +
Sbjct: 14  KFDVFLSFRGKDTRRTFISFLYKELIEMGIRTFKDDVELQSGRRIASDLLAAIENSKIAV 73

Query: 62  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY 97
           VI+S NY++S WCL+EL  IM+  +      +P+FY
Sbjct: 74  VIISKNYSASPWCLQELVMIMDVEKKGSIIVMPIFY 109

[Close]
BLAST of CmoCh10G011820 vs. NCBI nr
Match: gi|469474109|gb|AGH33850.1| (RGH11 [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 3.7e-28
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 1 

Query: 1   MKYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVI 60
           M YDVFISFRG+DVR  F G+L+  L RLG+KA +D K F IG+DL DLFKII+ES+  I
Sbjct: 14  MNYDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDLHDLFKIIDESRSAI 73

Query: 61  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY--QELMIKKCEGNWK 110
           V+LS +YAS+KWCLRELTKIM+SM  +  R LPVFY     ++K   G +K
Sbjct: 74  VVLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFK 124

[Close]
BLAST of CmoCh10G011820 vs. NCBI nr
Match: gi|51477386|gb|AAU04759.1| (MRGH11 [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 3.7e-28
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 1 

Query: 1   MKYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVI 60
           M YDVFISFRG+DVR  F G+L+  L RLG+KA +D K F IG+DL DLFKII+ES+  I
Sbjct: 14  MNYDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDLHDLFKIIDESRSAI 73

Query: 61  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY--QELMIKKCEGNWK 110
           V+LS +YAS+KWCLRELTKIM+SM  +  R LPVFY     ++K   G +K
Sbjct: 74  VVLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFK 124

[Close]
BLAST of CmoCh10G011820 vs. NCBI nr
Match: gi|778707801|ref|XP_011656060.1| (PREDICTED: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 3.7e-28
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 1 

Query: 1   MKYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVI 60
           M YDVFISFRG+DVR  F G+L+  L RLG+KA +D K F IG+DL DLFKII+ES+  I
Sbjct: 14  MNYDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDLHDLFKIIDESRSAI 73

Query: 61  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY--QELMIKKCEGNWK 110
           V+LS +YAS+KWCLRELTKIM+SM  +  R LPVFY     ++K   G +K
Sbjct: 74  VVLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFK 124

[Close]
BLAST of CmoCh10G011820 vs. NCBI nr
Match: gi|700197454|gb|KGN52631.1| (hypothetical protein Csa_5G647530 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 3.7e-28
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 1 

Query: 1   MKYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVI 60
           M YDVFISFRG+DVR  F G+L+  L RLG+KA +D K F IG+DL DLFKII+ES+  I
Sbjct: 81  MNYDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDLHDLFKIIDESRSAI 140

Query: 61  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY--QELMIKKCEGNWK 110
           V+LS +YAS+KWCLRELTKIM+SM  +  R LPVFY     ++K   G +K
Sbjct: 141 VVLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFK 191

[Close]
BLAST of CmoCh10G011820 vs. NCBI nr
Match: gi|659119228|ref|XP_008459543.1| (PREDICTED: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 3.7e-28
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 1 

Query: 1   MKYDVFISFRGKDVRKNFVGFLHQELERLGLKALVDEKEFKIGEDLFDLFKIIEESKFVI 60
           M YDVFISFRG+DVR  F G+L+  L RLG+KA +D K F IG+DL DLFKII+ES+  I
Sbjct: 14  MNYDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDLHDLFKIIDESRSAI 73

Query: 61  VILSNNYASSKWCLRELTKIMESMEMAQARALPVFY--QELMIKKCEGNWK 110
           V+LS +YAS+KWCLRELTKIM+SM  +  R LPVFY     ++K   G +K
Sbjct: 74  VVLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFK 124

The following BLAST results are available for this feature:
BLAST of CmoCh10G011820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TMVRN_NICGU4.5e-1847.37TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1[more]
TIR_ARATH2.9e-1744.79Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana GN=TIR PE=1 SV=... [more]
LAZ5_ARATH9.4e-1646.81Disease resistance protein LAZ5 OS=Arabidopsis thaliana GN=LAZ5 PE=1 SV=1[more]
CSA1_ARATH1.2e-1540.57Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1[more]
P2A05_ARATH7.9e-1544.09Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5 PE=2 SV=1[more]
BLAST of CmoCh10G011820 vs. TrEMBL
Match NameE-valueIdentityDescription
Q5DMW4_CUCME2.6e-2859.46MRGH11 OS=Cucumis melo GN=MRGH11 PE=4 SV=1[more]
A0A0A0KXU0_CUCSA2.6e-2859.46Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647530 PE=4 SV=1[more]
M4QSV5_CUCME2.6e-2859.46RGH11 OS=Cucumis melo GN=RGH11 PE=4 SV=1[more]
A0A059C601_EUCGR1.7e-1950.53Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02177 PE=4 SV=1[more]
G3MUE9_ROSMU4.8e-1951.55TIR-NBS-LRR resistance protein muRdr1G OS=Rosa multiflora GN=muRdr1G PE=4 SV=1[more]
BLAST of CmoCh10G011820 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G72950.11.3e-2045.83 Disease resistance protein (TIR-NBS class)[more]
AT1G72920.13.0e-2047.92 Toll-Interleukin-Resistance (TIR) domain family protein[more]
AT1G72940.18.7e-2046.88 Toll-Interleukin-Resistance (TIR) domain-containing protein[more]
AT5G45220.17.4e-1946.88 Disease resistance protein (TIR-NBS-LRR class) family[more]
AT1G17615.17.4e-1943.75 Disease resistance protein (TIR-NBS class)[more]
BLAST of CmoCh10G011820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|469474109|gb|AGH33850.1|3.7e-2859.46RGH11 [Cucumis melo][more]
gi|51477386|gb|AAU04759.1|3.7e-2859.46MRGH11 [Cucumis melo][more]
gi|778707801|ref|XP_011656060.1|3.7e-2859.46PREDICTED: TMV resistance protein N-like [Cucumis sativus][more]
gi|700197454|gb|KGN52631.1|3.7e-2859.46hypothetical protein Csa_5G647530 [Cucumis sativus][more]
gi|659119228|ref|XP_008459543.1|3.7e-2859.46PREDICTED: TMV resistance protein N-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000157TIR_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0005575 cellular_component
molecular_function GO:0032559 adenyl ribonucleotide binding
molecular_function GO:0043168 anion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0032550 purine ribonucleoside binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G011820.1CmoCh10G011820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000157Toll/interleukin-1 receptor homology (TIR) domainGENE3DG3DSA:3.40.50.10140coord: 2..102
score: 2.9
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPFAMPF01582TIRcoord: 2..99
score: 2.5
IPR000157Toll/interleukin-1 receptor homology (TIR) domainSMARTSM00255till_3coord: 2..116
score: 1.0
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPROFILEPS50104TIRcoord: 1..97
score: 2
IPR000157Toll/interleukin-1 receptor homology (TIR) domainunknownSSF52200Toll/Interleukin receptor TIR domaincoord: 2..98
score: 6.28
NoneNo IPR availablePANTHERPTHR11017LEUCINE-RICH REPEAT-CONTAINING PROTEINcoord: 1..96
score: 8.5

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh10G011820Melon (DHL92) v3.6.1cmomedB066
CmoCh10G011820Cucumber (Chinese Long) v3cmocucB0064
CmoCh10G011820Watermelon (97103) v2cmowmbB049
CmoCh10G011820Wax gourdcmowgoB0073
CmoCh10G011820Cucurbita maxima (Rimu)cmacmoB067
CmoCh10G011820Wild cucumber (PI 183967)cmocpiB059
CmoCh10G011820Cucumber (Chinese Long) v2cmocuB058
CmoCh10G011820Melon (DHL92) v3.5.1cmomeB063
CmoCh10G011820Watermelon (Charleston Gray)cmowcgB048
CmoCh10G011820Watermelon (97103) v1cmowmB041
CmoCh10G011820Cucurbita pepo (Zucchini)cmocpeB056
CmoCh10G011820Bottle gourd (USVL1VR-Ls)cmolsiB066
CmoCh10G011820Cucumber (Gy14) v2cgybcmoB022