CmoCh10G008010 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh10G008010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr10 : 3728495 .. 3730548 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTCGGTCGGTTTACTCTTCATCAGTGTCTTCGCTACCACCCCCAAGTCCGAAATCTCCGCCTGACTACCCGGATTTGTATGGGAAGCGTCGAGAGATAGCCAGGATACAGAAGCTTGAAGGAGAAATTGGTTTCCTTGAGGTGAGTTCGAATTGAAATGATTATCTCTGTTTTCATCAACTCACAATGACATGGTGACATCGGAAAGCTGATGTACAATTGCAAGCATTTCTCTTTTTTGTTATTAGCATTGCTAATTAGACTCAAAATCTGATCTTTTGGTTTGATTTAGAGAGCTAGTGTCCCTTAGAGTTTTAGAACAGATTCGATAATCTTAGAACTTCCATTTCGTGGTATAAAGCTTCTCCGAGACCTTCATAGAAAAGTACTGTCGATGCGTTACACATTTCTTGTTTTCTTGAATCAGGACGAACTAAAATCCATTCGAAGTCTTCAACCTGTCTCAATCAGCTGCAAAGAGTATGTTTCTCTTAAATTTCATCATCTTTTAATTTATTGAAGTTCTAATGTTTTCTTTCAGTTGACTGAACACAATCAATTAGGTATCGATCCATCCACTCTTTCGTTTCCACTGTTGATTAACATTACACTTTTGCAGGATTAGTGACTTTGTAACGGCCAACTCAGATCCATTGATGCCTACGTAAGAGTTCATTTTTCAGTAAACAAATCTGCATAAATTTAAGACTGCATTGATCATGATCCACGTCGATGTTTCTTTTTTCAAGCAGATATAGGACAAAACATCGGCGATATCGCATCTGGAAATGGTTATGGTTAGAACTTTCAACATACGAATTCTGATTCCAGCTTATTATCACTTAGAAAAATATTTTGTATATAACATTTTGTTACGATTGTCATGCAGCGGACTTCCTTGCTTTAATTTGTCATGGCTGTGCTGCTGCTCTTGCACTGGGTGCTCTGTCTACCTAGAGATGTCTCGCAGCAGTGATTGCAAACCATGCAAGTTTCCATCATGTTTAAGCTGTTGTAGCATGCCGAAGTGTAGTTCCTTCTCTTGTCCCTCTTTGTCCTGCTGTAGAAACATCTCGTGCCGTAGGTTGTGTTGTTTTATATCATTACCTTCACTTTCATGCCCCCCTTGTTGCAGCTGCTGCGAATGCAAATGCAACTGCAAATGCAGCTGTAAGTGCTCTTTTCCAAAATGTTCCCAGGTATCTTCTTGTCGCCTCTGCACAAAGTCCTGTTGCAACCCCTGCTCTTTATGCTGTTGCTTTTAGTTCAGCAACACTATTCCATATAGTTTATCTTGATCTTCTACATGATATAATCAGTGTACATTATGATGAATATCTTAATCTGCTGGATTATTGATGCAAATATTTTGAGTTGTTTAATCCTACTCTGCTGGATTATTGATGCAAATCATTGAAACTGGCTGGCCTCGTTATAAAACATGTTCATCATTGCTGTTTTGTCTAGTTTTTAGTGGAGGAGAGGGAAATTTGGGAGTTATAGGCATTTGTAAGTAAAAGCACACACTTAACTGGCCTTCATGTTTTTGAATTTTCCTAACAGGACCGACGGTAACAGTAATTCTTAGATAACTAGGAAAAGAAGTGCCAAATTTTATGCATTACATTAGTTTTGACTCTCCCCAGGCCTTCCCCTAAAGCATCTCAATGGCAAACCAAACGCTGAATTTTCCCATGCAATGATATGATCATTCTCTCTGGCTGATTGCTGATCATATCATCTTCTTGCTGTTTTCTTTCTGAAATTGGAGAAAGTTGGAGGAATGGAAAAACCTACAAATGGAAAACGCCCTATACAAAAACAACAATCACAACTTGGTCCAGGCGAATGCCACCGGGCTTCTAACTTGGTGTTGGTCATTGCTCCAAGCAATCGATCCAAACCCATATCTCGTGGTTCGAGCAGCGTCCCTGCTCGCCACGAATGTAACAGTGTACCTCTTCCTCTCCCCAACTTTAGAGAACACAAGCTTTGAAGGTTTCACCGTCACCTTCACAACCGACGGTGCAGTAGTAGCCACTTCATAA

mRNA sequence

ATGGCTGCTCGGTCGGTTTACTCTTCATCAGTGTCTTCGCTACCACCCCCAAGTCCGAAATCTCCGCCTGACTACCCGGATTTGTATGGGAAGCGTCGAGAGATAGCCAGGATACAGAAGCTTGAAGGAGAAATTGGTTTCCTTGAGAGTTTTAGAACAGATTCGATAATCTTAGAACTTCCATTTCGTGGTATAAAGCTTCTCCGAGACCTTCATAGAAAAGTACTGTCGATGCGTTACACATTTCTTGTTTTCTTGAATCAGGACGAACTAAAATCCATTCGAAGTCTTCAACCTGTCTCAATCAGCTGCAAAGAATCCATTGATGCCTACGACAAAACATCGGCGATATCGCATCTGGAAATGGTTATGGTTAGAACTTTCAACATACGAATTCTGATTCCAGCTTATTATCACTTAGAAAAATATTTTGTATATAACATTTTGTTACGATTGTCATGCAGCGGACTTCCTTGCTTTAATTTGTCATGGCTGTGCTGCTGCTCTTGCACTGGGTGCTCTGTCTACCTAGAGATGTCTCGCAGCACATGCCGAAGTGTAGTTCCTTCTCTTGTCCCTCTTTGTCCTGCTGTAGAAACATCTCGTGCCGTAGGTTGTGTTGTTTTATATCATTACCTTCACTTTCATGCCCCCCTTGTTGCAGCTGCTGCGAATGCAAATGCAACTGCAAATGCAGCTGTAAGTGCTCTTTTCCAAAATGTTCCCAGGTATCTTCTTGTCGCCTCTGCACAAAGTCCTGTTGCAACCCCTGCTCTTTATGCTGTTGCTTTTAGTTCAGCAACACTATTCCATATAGTTTATCTTGATCTTCTACATGATATAATCAGTTTGGAGGAATGGAAAAACCTACAAATGGAAAACGCCCTATACAAAAACAACAATCACAACTTGGTCCAGGCGAATGCCACCGGGCTTCTAACTTGGTGTTGGTCATTGCTCCAAGCAATCGATCCAAACCCATATCTCGTGGTTCGAGCAGCGTCCCTGCTCGCCACGAATGTAACAGTGTACCTCTTCCTCTCCCCAACTTTAGAGAACACAAGCTTTGAAGGTTTCACCGTCACCTTCACAACCGACGGTGCAGTAGTAGCCACTTCATAA

Coding sequence (CDS)

ATGGCTGCTCGGTCGGTTTACTCTTCATCAGTGTCTTCGCTACCACCCCCAAGTCCGAAATCTCCGCCTGACTACCCGGATTTGTATGGGAAGCGTCGAGAGATAGCCAGGATACAGAAGCTTGAAGGAGAAATTGGTTTCCTTGAGAGTTTTAGAACAGATTCGATAATCTTAGAACTTCCATTTCGTGGTATAAAGCTTCTCCGAGACCTTCATAGAAAAGTACTGTCGATGCGTTACACATTTCTTGTTTTCTTGAATCAGGACGAACTAAAATCCATTCGAAGTCTTCAACCTGTCTCAATCAGCTGCAAAGAATCCATTGATGCCTACGACAAAACATCGGCGATATCGCATCTGGAAATGGTTATGGTTAGAACTTTCAACATACGAATTCTGATTCCAGCTTATTATCACTTAGAAAAATATTTTGTATATAACATTTTGTTACGATTGTCATGCAGCGGACTTCCTTGCTTTAATTTGTCATGGCTGTGCTGCTGCTCTTGCACTGGGTGCTCTGTCTACCTAGAGATGTCTCGCAGCACATGCCGAAGTGTAGTTCCTTCTCTTGTCCCTCTTTGTCCTGCTGTAGAAACATCTCGTGCCGTAGGTTGTGTTGTTTTATATCATTACCTTCACTTTCATGCCCCCCTTGTTGCAGCTGCTGCGAATGCAAATGCAACTGCAAATGCAGCTGTAAGTGCTCTTTTCCAAAATGTTCCCAGGTATCTTCTTGTCGCCTCTGCACAAAGTCCTGTTGCAACCCCTGCTCTTTATGCTGTTGCTTTTAGTTCAGCAACACTATTCCATATAGTTTATCTTGATCTTCTACATGATATAATCAGTTTGGAGGAATGGAAAAACCTACAAATGGAAAACGCCCTATACAAAAACAACAATCACAACTTGGTCCAGGCGAATGCCACCGGGCTTCTAACTTGGTGTTGGTCATTGCTCCAAGCAATCGATCCAAACCCATATCTCGTGGTTCGAGCAGCGTCCCTGCTCGCCACGAATGTAACAGTGTACCTCTTCCTCTCCCCAACTTTAGAGAACACAAGCTTTGAAGGTTTCACCGTCACCTTCACAACCGACGGTGCAGTAGTAGCCACTTCATAA

Homology

[Close]

BLAST of CmoCh10G008010 vs. Swiss-Prot
Match: GG3_ARATH (Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis thaliana GN=GG3 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.0e-11
Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = 1


Query: 2  AARSVYSSSV--SSLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLE 50
          AA  V SSS+  SSLPPP PKSPP+YPDLYGKRRE AR+Q LE EIGFLE
Sbjct: 16 AAGGVSSSSLAPSSLPPPRPKSPPEYPDLYGKRREAARVQMLEREIGFLE 65

[Close]

BLAST of CmoCh10G008010 vs. TrEMBL
Match: A0A0A0LZK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G597050 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.9e-21
Identity = 82/195 (42.05%), Postives = 97/195 (49.74%), Query Frame = 1


Query: 1   MAARSVYSSSVSSLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLESFRTDSIILEL 60
           MAARSVYSSSVSSLPPPSPKSPP+YPDLYGKRR          EI  +++   +   LE 
Sbjct: 1   MAARSVYSSSVSSLPPPSPKSPPEYPDLYGKRR----------EIANIQTLEREIGFLE- 60

Query: 61  PFRGIKLLRDLHRKVLSMRYTFLVFLNQDELKSIRSLQPVSISCKESIDAYDKTSAISHL 120
                                       DELKS++SLQPVSI CKE I+ +  T++    
Sbjct: 61  ----------------------------DELKSLQSLQPVSICCKE-INDFVTTNSDPLT 120

Query: 121 EMVMVRTFNIRILIPAYYHLEKYFVYNILLRLSCSGLPCFNLSWLCCCSCTGCSVYLEMS 180
               V+    RI                  +  C G PCFNLSWLCCCSCT C++YLEM 
Sbjct: 121 PTCRVKQQRCRIW-----------------KWLC-GFPCFNLSWLCCCSCTECAIYLEMP 135

Query: 181 RSTCRSVVPSLVPLC 196
           R  C    P   P C
Sbjct: 181 R--CCGCKPCNFPSC 135

[Close]

BLAST of CmoCh10G008010 vs. TrEMBL
Match: A0A078DU57_BRANA (BnaA10g14860D protein OS=Brassica napus GN=BnaA10g14860D PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.1e-11
Identity = 66/211 (31.28%), Postives = 87/211 (41.23%), Query Frame = 1


Query: 13  SLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLESFRTDSIILELPFRGIKLLRDLH 72
           SLPPP PKSPP+YPDLYGKRRE AR+Q LE EIG+LE+                      
Sbjct: 24  SLPPPRPKSPPEYPDLYGKRREAARVQMLEREIGYLEA---------------------- 83

Query: 73  RKVLSMRYTFLVFLNQDELKSIRSLQPVSISCKESIDAYDKTSAISHLEMVMVRTFNIRI 132
            KV+ +      ++ Q E+K I  +QP S  CKE  D                   N   
Sbjct: 84  -KVVDLLNLGSYYIQQGEIKFIEGVQPASRCCKEVSDFV---------------VANSDP 143

Query: 133 LIPAYYHLEKYFVYNILLRLSCSGLPCFNLSWLCCCSCTGCSVYLEMSR----------- 192
           LIPA     ++        L C  +PC +L+  CCC  + CS +L   +           
Sbjct: 144 LIPAQRKSRRH--CRFWKWLCC--VPCLSLASFCCCCQSECSCHLRKPKCCNCTSCSCIG 192

Query: 193 ------STCRSVVPSLVPLCPAVETSRAVGC 207
                 S C ++     P CP+    R   C
Sbjct: 204 SKCCDGSCCSNICCCPKPSCPSCSCFRGCCC 192

[Close]

BLAST of CmoCh10G008010 vs. TrEMBL
Match: A0A059CU38_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03259 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 9.1e-11
Identity = 38/49 (77.55%), Postives = 41/49 (83.67%), Query Frame = 1


Query: 1  MAARSVYSSSVSSLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLE 50
          MAAR   SSSV SLPPP PKSPP+YPDLYGKRRE A++Q LE EIGFLE
Sbjct: 1  MAARPGCSSSVPSLPPPCPKSPPEYPDLYGKRREAAKVQMLEREIGFLE 49

[Close]

BLAST of CmoCh10G008010 vs. TrEMBL
Match: A0A067KFZ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07494 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10
Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 1


Query: 2  AARSVYSSSVSSLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLE 50
          AA+S  SSS+ SLPPP PKSPP+YPDLYGKRRE+A++Q LE EIGFLE
Sbjct: 11 AAKSARSSSLPSLPPPCPKSPPEYPDLYGKRREMAKVQMLEREIGFLE 58

[Close]

BLAST of CmoCh10G008010 vs. TrEMBL
Match: A0A072USW9_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_4g125015 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.5e-10
Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = 1


Query: 1  MAARSVYSSSVSSLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLE 50
          M   S  SSSV SLPPPSPKSPP+YPDLYGKRRE+A++Q LE EIGFLE
Sbjct: 3  MVRSSSSSSSVPSLPPPSPKSPPEYPDLYGKRREMAKVQMLEREIGFLE 51

[Close]

BLAST of CmoCh10G008010 vs. TAIR10
Match: AT5G20635.1 (AT5G20635.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-12
Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = 1


Query: 2  AARSVYSSSV--SSLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLE 50
          AA  V SSS+  SSLPPP PKSPP+YPDLYGKRRE AR+Q LE EIGFLE
Sbjct: 16 AAGGVSSSSLAPSSLPPPRPKSPPEYPDLYGKRREAARVQMLEREIGFLE 65

[Close]

BLAST of CmoCh10G008010 vs. NCBI nr
Match: gi|778663137|ref|XP_011660020.1| (PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 2.8e-21
Identity = 82/195 (42.05%), Postives = 97/195 (49.74%), Query Frame = 1


Query: 1   MAARSVYSSSVSSLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLESFRTDSIILEL 60
           MAARSVYSSSVSSLPPPSPKSPP+YPDLYGKRR          EI  +++   +   LE 
Sbjct: 1   MAARSVYSSSVSSLPPPSPKSPPEYPDLYGKRR----------EIANIQTLEREIGFLE- 60

Query: 61  PFRGIKLLRDLHRKVLSMRYTFLVFLNQDELKSIRSLQPVSISCKESIDAYDKTSAISHL 120
                                       DELKS++SLQPVSI CKE I+ +  T++    
Sbjct: 61  ----------------------------DELKSLQSLQPVSICCKE-INDFVTTNSDPLT 120

Query: 121 EMVMVRTFNIRILIPAYYHLEKYFVYNILLRLSCSGLPCFNLSWLCCCSCTGCSVYLEMS 180
               V+    RI                  +  C G PCFNLSWLCCCSCT C++YLEM 
Sbjct: 121 PTCRVKQQRCRIW-----------------KWLC-GFPCFNLSWLCCCSCTECAIYLEMP 135

Query: 181 RSTCRSVVPSLVPLC 196
           R  C    P   P C
Sbjct: 181 R--CCGCKPCNFPSC 135

[Close]

BLAST of CmoCh10G008010 vs. NCBI nr
Match: gi|659100104|ref|XP_008450928.1| (PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 4.8e-21
Identity = 82/195 (42.05%), Postives = 96/195 (49.23%), Query Frame = 1


Query: 1   MAARSVYSSSVSSLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLESFRTDSIILEL 60
           MAARSVYSSSVSSLPPPSPKSPP+YPDLYGKRR          EI  +++   +   L  
Sbjct: 1   MAARSVYSSSVSSLPPPSPKSPPEYPDLYGKRR----------EIANIQTLEREIGFL-- 60

Query: 61  PFRGIKLLRDLHRKVLSMRYTFLVFLNQDELKSIRSLQPVSISCKESIDAYDKTSAISHL 120
                                      +DELKS++SLQPVSI CKE I+ +   ++    
Sbjct: 61  ---------------------------EDELKSLQSLQPVSICCKE-INDFVTANSDPLT 120

Query: 121 EMVMVRTFNIRILIPAYYHLEKYFVYNILLRLSCSGLPCFNLSWLCCCSCTGCSVYLEMS 180
               V+    RI                  +  C G PCFNLSWLCCCSCT CSVYLEM 
Sbjct: 121 STCRVKQQRCRI-----------------WKWLC-GFPCFNLSWLCCCSCTECSVYLEMP 135

Query: 181 RSTCRSVVPSLVPLC 196
           R  C    P   P C
Sbjct: 181 R--CCGCKPCKFPSC 135

[Close]

BLAST of CmoCh10G008010 vs. NCBI nr
Match: gi|674940933|emb|CDX92447.1| (BnaA10g14860D [Brassica napus])

HSP 1 Score: 77.4 bits (189), Expect = 5.8e-11
Identity = 66/211 (31.28%), Postives = 87/211 (41.23%), Query Frame = 1


Query: 13  SLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLESFRTDSIILELPFRGIKLLRDLH 72
           SLPPP PKSPP+YPDLYGKRRE AR+Q LE EIG+LE+                      
Sbjct: 24  SLPPPRPKSPPEYPDLYGKRREAARVQMLEREIGYLEA---------------------- 83

Query: 73  RKVLSMRYTFLVFLNQDELKSIRSLQPVSISCKESIDAYDKTSAISHLEMVMVRTFNIRI 132
            KV+ +      ++ Q E+K I  +QP S  CKE  D                   N   
Sbjct: 84  -KVVDLLNLGSYYIQQGEIKFIEGVQPASRCCKEVSDFV---------------VANSDP 143

Query: 133 LIPAYYHLEKYFVYNILLRLSCSGLPCFNLSWLCCCSCTGCSVYLEMSR----------- 192
           LIPA     ++        L C  +PC +L+  CCC  + CS +L   +           
Sbjct: 144 LIPAQRKSRRH--CRFWKWLCC--VPCLSLASFCCCCQSECSCHLRKPKCCNCTSCSCIG 192

Query: 193 ------STCRSVVPSLVPLCPAVETSRAVGC 207
                 S C ++     P CP+    R   C
Sbjct: 204 SKCCDGSCCSNICCCPKPSCPSCSCFRGCCC 192

[Close]

BLAST of CmoCh10G008010 vs. NCBI nr
Match: gi|702303290|ref|XP_010049345.1| (PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like isoform X1 [Eucalyptus grandis])

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-10
Identity = 38/49 (77.55%), Postives = 41/49 (83.67%), Query Frame = 1


Query: 1  MAARSVYSSSVSSLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLE 50
          MAAR   SSSV SLPPP PKSPP+YPDLYGKRRE A++Q LE EIGFLE
Sbjct: 1  MAARPGCSSSVPSLPPPCPKSPPEYPDLYGKRREAAKVQMLEREIGFLE 49

[Close]

BLAST of CmoCh10G008010 vs. NCBI nr
Match: gi|702303296|ref|XP_010049347.1| (PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like isoform X2 [Eucalyptus grandis])

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-10
Identity = 38/49 (77.55%), Postives = 41/49 (83.67%), Query Frame = 1


Query: 1  MAARSVYSSSVSSLPPPSPKSPPDYPDLYGKRREIARIQKLEGEIGFLE 50
          MAAR   SSSV SLPPP PKSPP+YPDLYGKRRE A++Q LE EIGFLE
Sbjct: 1  MAARPGCSSSVPSLPPPCPKSPPEYPDLYGKRREAAKVQMLEREIGFLE 49

The following BLAST results are available for this feature:

BLAST of CmoCh10G008010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GG3_ARATH	2.0e-11	76.00	Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis thaliana GN=GG...	[more]

BLAST of CmoCh10G008010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZK9_CUCSA	1.9e-21	42.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G597050 PE=4 SV=1	[more]
A0A078DU57_BRANA	4.1e-11	31.28	BnaA10g14860D protein OS=Brassica napus GN=BnaA10g14860D PE=4 SV=1	[more]
A0A059CU38_EUCGR	9.1e-11	77.55	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03259 PE=4 SV=1	[more]
A0A067KFZ1_JATCU	1.2e-10	75.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07494 PE=4 SV=1	[more]
A0A072USW9_MEDTR	1.5e-10	75.51	Transmembrane protein, putative OS=Medicago truncatula GN=MTR_4g125015 PE=4 SV=1	[more]

BLAST of CmoCh10G008010 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20635.1	1.1e-12	76.00	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of CmoCh10G008010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778663137\|ref\|XP_011660020.1\|	2.8e-21	42.05	PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like [Cucumis sati...	[more]
gi\|659100104\|ref\|XP_008450928.1\|	4.8e-21	42.05	PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like [Cucumis melo...	[more]
gi\|674940933\|emb\|CDX92447.1\|	5.8e-11	31.28	BnaA10g14860D [Brassica napus]	[more]
gi\|702303290\|ref\|XP_010049345.1\|	1.3e-10	77.55	PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like isoform X1 [E...	[more]
gi\|702303296\|ref\|XP_010049347.1\|	1.3e-10	77.55	PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like isoform X2 [E...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005834	heterotrimeric G-protein complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004871	signal transducer activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G008010.1	CmoCh10G008010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32378	FAMILY NOT NAMED	coord: 3..49 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh10G008010	Cucsa.141810	Cucumber (Gy14) v1	cgycmoB0393
CmoCh10G008010	CmaCh10G007710	Cucurbita maxima (Rimu)	cmacmoB067
CmoCh10G008010	CmaCh11G007360	Cucurbita maxima (Rimu)	cmacmoB099
CmoCh10G008010	Csa1G597050	Cucumber (Chinese Long) v2	cmocuB038
CmoCh10G008010	MELO3C015527	Melon (DHL92) v3.5.1	cmomeB050
CmoCh10G008010	ClCG03G015020	Watermelon (Charleston Gray)	cmowcgB049
CmoCh10G008010	Cp4.1LG18g03120	Cucurbita pepo (Zucchini)	cmocpeB055
CmoCh10G008010	Cp4.1LG04g11180	Cucurbita pepo (Zucchini)	cmocpeB069
CmoCh10G008010	MELO3C015527.2	Melon (DHL92) v3.6.1	cmomedB053
CmoCh10G008010	CsaV3_2G001120	Cucumber (Chinese Long) v3	cmocucB0070
CmoCh10G008010	CsaV3_1G041120	Cucumber (Chinese Long) v3	cmocucB0045
CmoCh10G008010	CsGy1G027990	Cucumber (Gy14) v2	cgybcmoB006
CmoCh10G008010	Carg12952	Silver-seed gourd	carcmoB0128
CmoCh10G008010	Carg21923	Silver-seed gourd	carcmoB1197

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh10G008010	CmoCh11G007490	Cucurbita moschata (Rifu)	cmocmoB038

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh10G008010	Cucumber (Chinese Long) v3	cmocucB0076
CmoCh10G008010	Cucumber (Chinese Long) v3	cmocucB0089
CmoCh10G008010	Watermelon (97103) v2	cmowmbB051
CmoCh10G008010	Watermelon (97103) v2	cmowmbB076
CmoCh10G008010	Wax gourd	cmowgoB0066
CmoCh10G008010	Wax gourd	cmowgoB0067
CmoCh10G008010	Wax gourd	cmowgoB0080
CmoCh10G008010	Cucurbita moschata (Rifu)	cmocmoB061
CmoCh10G008010	Cucurbita moschata (Rifu)	cmocmoB077
CmoCh10G008010	Cucumber (Gy14) v1	cgycmoB0980
CmoCh10G008010	Cucurbita maxima (Rimu)	cmacmoB346
CmoCh10G008010	Cucurbita maxima (Rimu)	cmacmoB446
CmoCh10G008010	Cucurbita maxima (Rimu)	cmacmoB876
CmoCh10G008010	Wild cucumber (PI 183967)	cmocpiB041
CmoCh10G008010	Wild cucumber (PI 183967)	cmocpiB070
CmoCh10G008010	Wild cucumber (PI 183967)	cmocpiB076
CmoCh10G008010	Cucumber (Chinese Long) v2	cmocuB068
CmoCh10G008010	Cucumber (Chinese Long) v2	cmocuB074
CmoCh10G008010	Melon (DHL92) v3.5.1	cmomeB048
CmoCh10G008010	Melon (DHL92) v3.5.1	cmomeB072
CmoCh10G008010	Watermelon (Charleston Gray)	cmowcgB034
CmoCh10G008010	Watermelon (97103) v1	cmowmB034
CmoCh10G008010	Watermelon (97103) v1	cmowmB042
CmoCh10G008010	Bottle gourd (USVL1VR-Ls)	cmolsiB047
CmoCh10G008010	Bottle gourd (USVL1VR-Ls)	cmolsiB050
CmoCh10G008010	Cucumber (Gy14) v2	cgybcmoB441
CmoCh10G008010	Cucumber (Gy14) v2	cgybcmoB876
CmoCh10G008010	Melon (DHL92) v3.6.1	cmomedB051
CmoCh10G008010	Melon (DHL92) v3.6.1	cmomedB078