CmoCh10G006710 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh10G006710
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTranscription factor bHLH68
LocationCmo_Chr10 : 3076303 .. 3079268 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGAGAGAGAGAGAGAGAGAAGAGAATATAAAGACAAAGGTTGTGTCTGAAACTCCATGATTATTCAAAATCTCTCTGAAAATTCAAAGCTTCTCTGGTAAGGCCTTGTTGAAGAAGAAGAAGAAGATGAACATAGGGGGTTTGCAAAGCTCAGTTATGCAACAGATGATGATGGGTTCAGAAAACCCTAATTGGTGGAATTCAAATAATCACTCTTCACTTCCTTTTCCTTCTAATTCCTTCTATCACCTTCAACACCACTTTCCAGATTCTTGGAGCCAACTTCTCTTGTAAATCTCTCTCTCTTTCTCTCTCTCTCTTTTAAATTTTAATCCTTTTTTACTTGATTATGTTTTTTATTATAAAGGGGCGATGTGGTTGGTGAAGAGGATCAAAAGGGTTGTATGCCAATGTTTCAACAAGCCAAGAAGTTGGAGGATTGGGGTGAAGAGACTTTGAATGGCAAAGTTGATGTCAAGAAAGACCACTCACCTCATTCCATCAACTATGTCTATGGACACGGCGGTGTTGGTGTCGGTGTCGGTGTCGTAGGCGACGATTATCAATTGGCTCCTAAACAAAACTGGTCCCCTATGATACCAGCTTCTTCTCCTCACTCATGTATCACAACTTTCAGTAGTAATATGTTGGATTTTTCAAATAATAACAATAACAAGTCTCCTGCTCATCATTCCCGCCCTACGCATCCTCAACCAGATCGCTCTTCCGAGGTTAGTACACAAATCATTTATGTCATGTTCAAAATTTTAGTATCGGGGTTTGGAAGAGACCCTTCAGAGACAAAATAATTAGTATCAACTTTGAATATAGTTCAATCGTAATTGATTTTGAGTTTGTGTTTGTTTAGTGTAACAGCAATCCAAGGGGTGGGGCAATGAAGAAATCGAGGGTTGAATCCTCTTCAAACCAAACTAGTTTGAAGGTAAGAATCAAAATCCACAAAAACAAAAGGAACAAACTAAAAAACCAACCCACATGGACATACAAATTGAACTAATTAATTGTCGTTCTTACTTGTCCATTTCTCCTCTCTTGCTGATTCTTAATACTAAATTGAACTAATTACACCATGTTTTTCCTTCTTTTACCATAGAATTACATGTGCTGCTTAGATTATTAATGCTTCTTTTTGGTAAAAAAAAAAAAAAAATTATTAATTACCCAGGTTAGGAAGGAAAAATTGGGTGACAGAATTACAGCTCTCCACCAGCTTGTTTCTCCATTTGGGAAGGTAAAAACTAATACCCCCACAGTAATTTGATTCGTTTTAGGGATTAATTACTGAATTAGAAAAAAGAGAATTACTTTTGATAATAATACAAACTTTTTCTTTGCCAAAGTCTTGAGAATGAGCTGTTTGTTCAAACCTTATGGACCCAGAAAAACAAAATAAAATAAAAAAATAAATATAGAGTTATTTAATTTTGATTAAATATTCAATTTAAGGCAAAAAAATATATATGAATTTGGATGGTTGTGGCGTGAAGCTGAGGTTGTCTTTTATTTTGTACAGACTGACACAGCTTCAGTTTTGTTAGAAGCTATTGGCTACATCAGATTCCTTCATACTCAAATTGAGGTGATGTTTCTTCTTCCATCTTCTTTTTCTTTTTCTTTTTTTTTTTTTAATTTCATATGAACACGATGAACATATACATGTCGAGGATTATTGGGAACGAGTCGCATCTTAATTAATTGAGTGGAAGATCATGGACTTACAAGTGAGGAATACTATCTCTATTGGTACGAGACCTTTAAGGAAGCTTAAAGCACAGCCATGAGAGCTTGTGCTCAAAGTAGACAATATCATATTACTGTAGAGAGTCGTAATCTTTCATTTTTGCATTGGATTTAGGCCCTCGGTTTGCCTTACTTGGGCAGTTCTTCGGGAAGTACGAGGCAGCAAGAACAACATTCTGTAAGAAATAATTCTCAACTTCCAAAAATATACAAAACCCATTTCAAATTTATGGACAAATTTTGTTTTTTTTTATAAATTTTGTAGGTTCCAGGAGAAAGAAATTGTATGTTTCCTGAGGACCCTGGCCAGGTGAGGTTTAAATATAATACATATAATTTTTCCTTTTTCAAAAGGCTACGCTACTTGATCGTACATTCTTAATTGGTAAGGAATCATAAAGTATCCAACTTTATTGACTTGAAATGATCCAAGGTTTTAATAACTATATACATTCTCATTACCCTTGTTTCTTAATCAATAAACTTTCTTAAAAACACCAAATTAATCGGCTTTATTCACCGGTTTTCTCTCATGTTATTGTTTTCACTAGCTCTTGAACGACAACGGCTTGAATAAGAATGGAGTCTCTCACCAGGTTGGTTCACTGCTAATAGATATTATCAGTTTTGGTCTTGACTTGCATGTAGATATTAATTTTTCGTTGTTGAATGTATGGAATTGGTCAGGTGGGTCTAATAAAAATTTGAACTTTAATTTGTTTTTAGGAGGAAGAGGGAGAGAAGGATCTGAGGAGTAGAGGGTTATGTCTGGTTCCAGTATCCTGCACCCTGCAAGTTGGGAGTGAGAATGGAGCAGATTATTGGGCTCCGACGTTCGGCGGTGGTGGCGGTTTCCGGTAGACGGTGGTGGTGGTGGTGGTGGTGGAAGAATGAAGATGGAGAGAGGTACATTATGAAAGTGATATCATCATGAGCAGTCACTCTGCTAAAGAAACCAAAGGCTGATTGCTCATGATGCTATTCAAACATACTCCAACCTCAGAAATATTATACCAACAGTGTTGTAGCAGATGCCTTTCAAAATCTAATCTTTTCTTAGTAATTGTGGGTTTTTTTTTTTTTTTTTTAAATCTTAGTTTATAATTAAAATGTTAATTATTATTATGATGTTTTGATTATCCCCCTTCATAATTTGGCTACTCTCTTTCAGCATTATAAATGAATTAAATACACTTCTAAACGC

mRNA sequence

GGAGAGAGAGAGAGAGAGAGAAGAGAATATAAAGACAAAGGTTGTGTCTGAAACTCCATGATTATTCAAAATCTCTCTGAAAATTCAAAGCTTCTCTGGTAAGGCCTTGTTGAAGAAGAAGAAGAAGATGAACATAGGGGGTTTGCAAAGCTCAGTTATGCAACAGATGATGATGGGTTCAGAAAACCCTAATTGGTGGAATTCAAATAATCACTCTTCACTTCCTTTTCCTTCTAATTCCTTCTATCACCTTCAACACCACTTTCCAGATTCTTGGAGCCAACTTCTCTTGGGCGATGTGGTTGGTGAAGAGGATCAAAAGGGTTGTATGCCAATGTTTCAACAAGCCAAGAAGTTGGAGGATTGGGGTGAAGAGACTTTGAATGGCAAAGTTGATGTCAAGAAAGACCACTCACCTCATTCCATCAACTATGTCTATGGACACGGCGGTGTTGGTGTCGGTGTCGGTGTCGTAGGCGACGATTATCAATTGGCTCCTAAACAAAACTGGTCCCCTATGATACCAGCTTCTTCTCCTCACTCATGTATCACAACTTTCAGTAGTAATATGTTGGATTTTTCAAATAATAACAATAACAAGTCTCCTGCTCATCATTCCCGCCCTACGCATCCTCAACCAGATCGCTCTTCCGAGGTTAGTACACAAATCATTTATGTCATGTTCAAAATTTTATGTAACAGCAATCCAAGGGGTGGGGCAATGAAGAAATCGAGGGTTGAATCCTCTTCAAACCAAACTAGTTTGAAGACTGACACAGCTTCAGTTTTGTTAGAAGCTATTGGCTACATCAGATTCCTTCATACTCAAATTGAGGTGATGTTTCTTCTTCCATCTTCTTTTTCTTTTTCTTTTTTTTTTTTTAATTTCATATGAACACGATGAACATATACATGTCGAGGATTATTGGGAACGAGTCGCATCTTAATTAATTGAGTGGAAGATCATGGACTTACAAGTGAGGAATACTATCTCTATTGGTACGAGACCTTTAAGGAAGCTTAAAGCACAGCCATGAGAGCTTGTGCTCAAAGTAGACAATATCATATTACTGTAGAGAGTCGTAATCTTTCATTTTTGCATTGGATTTAGGCCCTCGGTTTGCCTTACTTGGGCAGTTCTTCGGGAAGTACGAGGCAGCAAGAACAACATTCTGTTCCAGGAGAAAGAAATTGTATGTTTCCTGAGGACCCTGGCCAGGTGAGGTTTAAATATAATACATATAATTTTTCCTTTTTCAAAAGGCTACGCTACTTGATCCTCTTGAACGACAACGGCTTGAATAAGAATGGAGTCTCTCACCAGGAGGAAGAGGGAGAGAAGGATCTGAGGAGTAGAGGGTTATGTCTGGTTCCAGTATCCTGCACCCTGCAAGTTGGGAGTGAGAATGGAGCAGATTATTGGGCTCCGACGTTCGGCGGTGGTGGCGGTTTCCGGTAGACGGTGGTGGTGGTGGTGGTGGTGGAAGAATGAAGATGGAGAGAGGTACATTATGAAAGTGATATCATCATGAGCAGTCACTCTGCTAAAGAAACCAAAGGCTGATTGCTCATGATGCTATTCAAACATACTCCAACCTCAGAAATATTATACCAACAGTGTTGTAGCAGATGCCTTTCAAAATCTAATCTTTTCTTAGTAATTGTGGGTTTTTTTTTTTTTTTTTTAAATCTTAGTTTATAATTAAAATGTTAATTATTATTATGATGTTTTGATTATCCCCCTTCATAATTTGGCTACTCTCTTTCAGCATTATAAATGAATTAAATACACTTCTAAACGC

Coding sequence (CDS)

ATGAACATAGGGGGTTTGCAAAGCTCAGTTATGCAACAGATGATGATGGGTTCAGAAAACCCTAATTGGTGGAATTCAAATAATCACTCTTCACTTCCTTTTCCTTCTAATTCCTTCTATCACCTTCAACACCACTTTCCAGATTCTTGGAGCCAACTTCTCTTGGGCGATGTGGTTGGTGAAGAGGATCAAAAGGGTTGTATGCCAATGTTTCAACAAGCCAAGAAGTTGGAGGATTGGGGTGAAGAGACTTTGAATGGCAAAGTTGATGTCAAGAAAGACCACTCACCTCATTCCATCAACTATGTCTATGGACACGGCGGTGTTGGTGTCGGTGTCGGTGTCGTAGGCGACGATTATCAATTGGCTCCTAAACAAAACTGGTCCCCTATGATACCAGCTTCTTCTCCTCACTCATGTATCACAACTTTCAGTAGTAATATGTTGGATTTTTCAAATAATAACAATAACAAGTCTCCTGCTCATCATTCCCGCCCTACGCATCCTCAACCAGATCGCTCTTCCGAGGTTAGTACACAAATCATTTATGTCATGTTCAAAATTTTATGTAACAGCAATCCAAGGGGTGGGGCAATGAAGAAATCGAGGGTTGAATCCTCTTCAAACCAAACTAGTTTGAAGACTGACACAGCTTCAGTTTTGTTAGAAGCTATTGGCTACATCAGATTCCTTCATACTCAAATTGAGGTGATGTTTCTTCTTCCATCTTCTTTTTCTTTTTCTTTTTTTTTTTTTAATTTCATATGA
Homology
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BLAST of CmoCh10G006710 vs. Swiss-Prot
Match: BH068_ARATH (Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-10
Identity = 99/338 (29.29%), Postives = 136/338 (40.24%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWN----------------------------------- 60
           MN G L+SS +QQ+M    NPNWWN                                   
Sbjct: 1   MNRGVLESSPVQQLMAAG-NPNWWNVSGGMRPPPPLMGHQQAPLPPHMTPNNNYLRPRMM 60

Query: 61  ---------------SNNHSSLPFPSN----SFYHLQHHFPDSWS--QLLLGDVV-GEED 120
                          S++ SS   P+N    S+       P+SWS  QLLLG ++ GEE+
Sbjct: 61  PTPFPHFLPSPATSSSSSSSSPSLPNNPNLSSWLESNDLPPESWSLSQLLLGGLMMGEEE 120

Query: 121 QKGCMPM-----------FQQAKKLEDWGEETLNGK------VDVKKDHSPHSINYVYGH 180
           +   M             FQ   +LE+W E+ L+ +      VD+K++            
Sbjct: 121 RLEMMNHHNHHDEQQHHGFQGKIRLENWEEQVLSHQQASMVAVDIKQE------------ 180

Query: 181 GGVGVGVGVVGDDYQLAPKQNWSPMIPASSPHSCITTFSSN--MLDFSNNNNNKSPAHHS 239
           G +    G V       P ++       +S +S     ++N  MLDFS+N+N     H S
Sbjct: 181 GNINNNNGYVISSPNSPPNKSCVTTTTTTSLNSNDDNINNNNNMLDFSSNHNG---LHLS 240

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BLAST of CmoCh10G006710 vs. TrEMBL
Match: A0A0A0M120_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G697530 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.2e-69
Identity = 174/313 (55.59%), Postives = 193/313 (61.66%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWNSNN-------------------------------H 60
           MN G LQSSVMQQMM GSENPNWWN  N                               H
Sbjct: 1   MNRGVLQSSVMQQMM-GSENPNWWNMMNISGSMRSSTITQHSSPNHTNNSSSSSNILFPH 60

Query: 61  SSLPFPSNSFYHLQHH--FPDSWSQLLLGDVVGEEDQKGCMPMFQQAKKLEDWGEETLNG 120
           SSLPFPSN +Y  Q H   P+SWSQLLLG +VGE+DQKGCM MFQ +KKLEDW EE LN 
Sbjct: 61  SSLPFPSNCYYDAQDHHLIPESWSQLLLGGLVGEDDQKGCMGMFQ-SKKLEDWEEEILNS 120

Query: 121 ---------KVDVKKDHSPHSINYVYGHGGVG-----VGVGVVGDDYQL-APKQNWSPMI 180
                    +VDVKK+HSPH+ +YVYGHGG G     VG GV GDDYQL A KQNWSPMI
Sbjct: 121 NNNNTQHQQQVDVKKEHSPHASSYVYGHGGGGSGGGGVGGGVGGDDYQLVASKQNWSPMI 180

Query: 181 PASSPHSCITTFSSNMLDFSNNNNN-KSPAHHSRPTHPQP--DRSSEVSTQIIYVMFKIL 240
            +SSP SC+T+FSSNMLDFSNNNNN KS A HSRP +P    DRSSE             
Sbjct: 181 QSSSPQSCVTSFSSNMLDFSNNNNNNKSLADHSRPRNPPQVLDRSSE------------- 240

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BLAST of CmoCh10G006710 vs. TrEMBL
Match: D7TBK3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03560 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-40
Identity = 127/289 (43.94%), Postives = 158/289 (54.67%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWNSNNHSS--------LPFPSNSF------------- 60
           MN G LQSS +QQMM G  NPNWWN N+           LP PSN F             
Sbjct: 1   MNRGVLQSSPVQQMMAG--NPNWWNINSMRPPPQQPPPFLPSPSNLFPQYTPTSSLPMSA 60

Query: 61  -YHLQHHFPDSWSQLLLGDVVGEEDQKGCMPMFQQAKKLEDWGEETLNGK-----VDVKK 120
            +H     P+SWSQLLLG +VGEE++ G M  FQ AKKLE+W ++ L+       VD+K+
Sbjct: 61  SWHDNQELPESWSQLLLGGLVGEEEKSG-MSHFQ-AKKLENWEDQVLHQATNPPVVDIKQ 120

Query: 121 DHSPHSINYVYGHGGVGVGVGVVGDDYQLAPKQNWSPMIPASSPHSCITTFSSNMLDFSN 180
           ++S  S  Y+YGHG          +D+Q A K  WS ++PASSP SC+T+FSSNMLDFS+
Sbjct: 121 ENSASS--YMYGHGN---------EDFQ-ATKPTWSQIMPASSPKSCVTSFSSNMLDFSS 180

Query: 181 NNNNKSPAHHSRPTHPQPDRSSEVSTQIIYVMFKILCNSNPRGGAMKKSRVESSSNQTSL 240
           N  +          HPQPDRSSE             CNS   GGA+KK+RV++S  Q + 
Sbjct: 181 NKADVK--------HPQPDRSSE-------------CNSTATGGALKKARVQASPTQPTF 240

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BLAST of CmoCh10G006710 vs. TrEMBL
Match: A5BQY3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041271 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.3e-40
Identity = 126/289 (43.60%), Postives = 157/289 (54.33%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWNSNNHSS--------LPFPSNSF------------- 60
           MN G LQSS +QQMM G  NPNWWN N+           LP PSN F             
Sbjct: 1   MNRGVLQSSPVQQMMAG--NPNWWNINSMRPPPQQPPPFLPSPSNLFPQYTPTSSLPMSA 60

Query: 61  -YHLQHHFPDSWSQLLLGDVVGEEDQKGCMPMFQQAKKLEDWGEETLNGK-----VDVKK 120
            +H     P+SWSQLLLG + GEE++ G M  FQ AKKLE+W ++ L+       VD+K+
Sbjct: 61  SWHDNQELPESWSQLLLGGLXGEEEKSG-MSHFQ-AKKLENWEDQVLHQATNPPVVDIKQ 120

Query: 121 DHSPHSINYVYGHGGVGVGVGVVGDDYQLAPKQNWSPMIPASSPHSCITTFSSNMLDFSN 180
           ++S  S  Y+YGHG          +D+Q A K  WS ++PASSP SC+T+FSSNMLDFS+
Sbjct: 121 ENSASS--YMYGHGN---------EDFQ-ATKPTWSQIMPASSPKSCVTSFSSNMLDFSS 180

Query: 181 NNNNKSPAHHSRPTHPQPDRSSEVSTQIIYVMFKILCNSNPRGGAMKKSRVESSSNQTSL 240
           N  +          HPQPDRSSE             CNS   GGA+KK+RV++S  Q + 
Sbjct: 181 NKADVK--------HPQPDRSSE-------------CNSTATGGALKKARVQASPTQPTF 240

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BLAST of CmoCh10G006710 vs. TrEMBL
Match: K7KRP2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G229500 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-36
Identity = 116/271 (42.80%), Postives = 153/271 (56.46%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWNSNN--------HSSLPF---PSN------------ 60
           MN G LQSS ++QMM G+ N NWWN N          +S PF   PSN            
Sbjct: 1   MNRGVLQSSPVKQMMAGNPN-NWWNINTMRPPPPPPQASPPFFSTPSNFLTPYYTPTSSL 60

Query: 61  ---SFYHLQHHFPDSWSQLLLGDVVGEEDQKGCMPMFQQAKKLEDWGEETLNGK-----V 120
              S++      P+SWSQLL+  +V EE++ G   +  Q+KKLE+W ++ L+       V
Sbjct: 61  PLPSWHDNNQELPESWSQLLMSGMVSEEEKGGMCQV--QSKKLENWEQQMLSQAPSAPIV 120

Query: 121 DVKKDHSPHSINYVYGHGGVGVGVGVVGDDYQLAPKQNWSPMIPASSPHSCITTFSSNML 180
           DVK++ S +S  Y YGHG          +++Q A K  WS ++PASSP SC+T+FSS+ML
Sbjct: 121 DVKQESSVNS--YAYGHGN---------EEFQPA-KPTWSQIVPASSPKSCVTSFSSSML 180

Query: 181 DFSNNNNNKSPAHHSRPTHPQPDRSSEVSTQIIYVMFKILCNSNPRGGAMKKSRVESSSN 240
           DFSNNN +  P        P PD SSE             C+S   GGA KK+RV+  + 
Sbjct: 181 DFSNNNTDARP--------PPPDPSSE-------------CDSAATGGAFKKARVQPPTT 235

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BLAST of CmoCh10G006710 vs. TrEMBL
Match: A0A061GUE6_THECC (Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_037840 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.1e-35
Identity = 124/304 (40.79%), Postives = 152/304 (50.00%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWN----------------------------------S 60
           MN G LQSS +QQMM G  NPNWW+                                  S
Sbjct: 1   MNRGVLQSSTVQQMMAG--NPNWWSINSMRPPTHHQQPSPFLPPPPTFFPQYTPTSSSSS 60

Query: 61  NNHSSLPFPSNSFYHLQHHFPDSWSQLLLGDVVGEEDQKGCMPMFQQA--KKLEDWGEET 120
           ++ SSLP PS   +H     P+SWSQLLLG  VGEE+ KG +  FQ    KK+E+W E+ 
Sbjct: 61  SSSSSLPIPS---WHDNQELPESWSQLLLGGFVGEEE-KGGIGQFQVQVPKKVENWEEQA 120

Query: 121 LN-----GKVDVKKDHSPHSINYVYGHGGVGVGVGVVGDDYQLAPKQNWSPMI-PASSPH 180
           L+       VDVK+++S  S  YVYGH           +D+  A K  WS  I PASSP 
Sbjct: 121 LHQASNASVVDVKQENSASS--YVYGHAN---------EDFHQATKPAWSHQIMPASSPK 180

Query: 181 SCITTFSSNMLDFSNNNNNKSPAHHSRPTHPQPDRSSEVSTQIIYVMFKILCNSNPRGGA 240
           SC+T+FSSNMLDFS N  +          HP PDRSSE             CNS   GG 
Sbjct: 181 SCVTSFSSNMLDFSGNKADVR--------HPPPDRSSE-------------CNSTATGGT 240

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BLAST of CmoCh10G006710 vs. TAIR10
Match: AT4G29100.1 (AT4G29100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 8.6e-12
Identity = 99/338 (29.29%), Postives = 136/338 (40.24%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWN----------------------------------- 60
           MN G L+SS +QQ+M    NPNWWN                                   
Sbjct: 1   MNRGVLESSPVQQLMAAG-NPNWWNVSGGMRPPPPLMGHQQAPLPPHMTPNNNYLRPRMM 60

Query: 61  ---------------SNNHSSLPFPSN----SFYHLQHHFPDSWS--QLLLGDVV-GEED 120
                          S++ SS   P+N    S+       P+SWS  QLLLG ++ GEE+
Sbjct: 61  PTPFPHFLPSPATSSSSSSSSPSLPNNPNLSSWLESNDLPPESWSLSQLLLGGLMMGEEE 120

Query: 121 QKGCMPM-----------FQQAKKLEDWGEETLNGK------VDVKKDHSPHSINYVYGH 180
           +   M             FQ   +LE+W E+ L+ +      VD+K++            
Sbjct: 121 RLEMMNHHNHHDEQQHHGFQGKIRLENWEEQVLSHQQASMVAVDIKQE------------ 180

Query: 181 GGVGVGVGVVGDDYQLAPKQNWSPMIPASSPHSCITTFSSN--MLDFSNNNNNKSPAHHS 239
           G +    G V       P ++       +S +S     ++N  MLDFS+N+N     H S
Sbjct: 181 GNINNNNGYVISSPNSPPNKSCVTTTTTTSLNSNDDNINNNNNMLDFSSNHNG---LHLS 240

[Close]
BLAST of CmoCh10G006710 vs. NCBI nr
Match: gi|778664438|ref|XP_011660295.1| (PREDICTED: transcription factor bHLH68 isoform X2 [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 4.8e-73
Identity = 174/291 (59.79%), Postives = 193/291 (66.32%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWNSNN-------------------------------H 60
           MN G LQSSVMQQMM GSENPNWWN  N                               H
Sbjct: 1   MNRGVLQSSVMQQMM-GSENPNWWNMMNISGSMRSSTITQHSSPNHTNNSSSSSNILFPH 60

Query: 61  SSLPFPSNSFYHLQHH--FPDSWSQLLLGDVVGEEDQKGCMPMFQQAKKLEDWGEETLNG 120
           SSLPFPSN +Y  Q H   P+SWSQLLLG +VGE+DQKGCM MFQ +KKLEDW EE LN 
Sbjct: 61  SSLPFPSNCYYDAQDHHLIPESWSQLLLGGLVGEDDQKGCMGMFQ-SKKLEDWEEEILNS 120

Query: 121 ---------KVDVKKDHSPHSINYVYGHGGVG-----VGVGVVGDDYQL-APKQNWSPMI 180
                    +VDVKK+HSPH+ +YVYGHGG G     VG GV GDDYQL A KQNWSPMI
Sbjct: 121 NNNNTQHQQQVDVKKEHSPHASSYVYGHGGGGSGGGGVGGGVGGDDYQLVASKQNWSPMI 180

Query: 181 PASSPHSCITTFSSNMLDFSNNNNN-KSPAHHSRPTHPQP--DRSSEVSTQIIYVMFKIL 240
            +SSP SC+T+FSSNMLDFSNNNNN KS A HSRP +P    DRSSE             
Sbjct: 181 QSSSPQSCVTSFSSNMLDFSNNNNNNKSLADHSRPRNPPQVLDRSSE------------- 240

[Close]
BLAST of CmoCh10G006710 vs. NCBI nr
Match: gi|659125556|ref|XP_008462745.1| (PREDICTED: transcription factor bHLH68 isoform X4 [Cucumis melo])

HSP 1 Score: 277.3 bits (708), Expect = 2.6e-71
Identity = 173/288 (60.07%), Postives = 191/288 (66.32%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWNSNN-------------------------------- 60
           MN G LQSSVMQQMM GSENPNWWN  N                                
Sbjct: 1   MNRGVLQSSVMQQMM-GSENPNWWNMMNISGSMRSSTITQHSSPNHTNNSSSSSSNILFP 60

Query: 61  HSSLPFPSNSFYHLQHH--FPDSWSQLLLGDVVGEEDQKGCMPMFQQAKKLEDWGEETLN 120
           HSSLPFPSN +Y  Q H   P+SWSQLLLG +V E+DQKGCM MFQ +KKLEDW EE LN
Sbjct: 61  HSSLPFPSNCYYDAQDHQLIPESWSQLLLGGLVVEDDQKGCMGMFQ-SKKLEDWEEEILN 120

Query: 121 G----------KVDVKKDHSPHSINYVYGHGGVGVGVGVVGDDYQL-APKQNWSPMIPAS 180
                      +VDVKK+HSPH+ +YVYGHGG G GVG  GDDYQL A KQNWSPMI +S
Sbjct: 121 SNNNNNTQHQQQVDVKKEHSPHANSYVYGHGGGG-GVGG-GDDYQLVASKQNWSPMIQSS 180

Query: 181 SPHSCITTFSSNMLDFSNNNNN-KSPAHHSRPTHPQP--DRSSEVSTQIIYVMFKILCNS 240
           SP SC+T+FSSNMLDFSNNNNN KS A HSRP +P P  DRSSE             CNS
Sbjct: 181 SPQSCVTSFSSNMLDFSNNNNNNKSLADHSRPRNPPPVLDRSSE-------------CNS 240

[Close]
BLAST of CmoCh10G006710 vs. NCBI nr
Match: gi|449449517|ref|XP_004142511.1| (PREDICTED: transcription factor bHLH68 isoform X1 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 3.2e-69
Identity = 174/313 (55.59%), Postives = 193/313 (61.66%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWNSNN-------------------------------H 60
           MN G LQSSVMQQMM GSENPNWWN  N                               H
Sbjct: 1   MNRGVLQSSVMQQMM-GSENPNWWNMMNISGSMRSSTITQHSSPNHTNNSSSSSNILFPH 60

Query: 61  SSLPFPSNSFYHLQHH--FPDSWSQLLLGDVVGEEDQKGCMPMFQQAKKLEDWGEETLNG 120
           SSLPFPSN +Y  Q H   P+SWSQLLLG +VGE+DQKGCM MFQ +KKLEDW EE LN 
Sbjct: 61  SSLPFPSNCYYDAQDHHLIPESWSQLLLGGLVGEDDQKGCMGMFQ-SKKLEDWEEEILNS 120

Query: 121 ---------KVDVKKDHSPHSINYVYGHGGVG-----VGVGVVGDDYQL-APKQNWSPMI 180
                    +VDVKK+HSPH+ +YVYGHGG G     VG GV GDDYQL A KQNWSPMI
Sbjct: 121 NNNNTQHQQQVDVKKEHSPHASSYVYGHGGGGSGGGGVGGGVGGDDYQLVASKQNWSPMI 180

Query: 181 PASSPHSCITTFSSNMLDFSNNNNN-KSPAHHSRPTHPQP--DRSSEVSTQIIYVMFKIL 240
            +SSP SC+T+FSSNMLDFSNNNNN KS A HSRP +P    DRSSE             
Sbjct: 181 QSSSPQSCVTSFSSNMLDFSNNNNNNKSLADHSRPRNPPQVLDRSSE------------- 240

[Close]
BLAST of CmoCh10G006710 vs. NCBI nr
Match: gi|659125554|ref|XP_008462744.1| (PREDICTED: transcription factor bHLH68 isoform X3 [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 1.8e-67
Identity = 173/310 (55.81%), Postives = 191/310 (61.61%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWNSNN-------------------------------- 60
           MN G LQSSVMQQMM GSENPNWWN  N                                
Sbjct: 1   MNRGVLQSSVMQQMM-GSENPNWWNMMNISGSMRSSTITQHSSPNHTNNSSSSSSNILFP 60

Query: 61  HSSLPFPSNSFYHLQHH--FPDSWSQLLLGDVVGEEDQKGCMPMFQQAKKLEDWGEETLN 120
           HSSLPFPSN +Y  Q H   P+SWSQLLLG +V E+DQKGCM MFQ +KKLEDW EE LN
Sbjct: 61  HSSLPFPSNCYYDAQDHQLIPESWSQLLLGGLVVEDDQKGCMGMFQ-SKKLEDWEEEILN 120

Query: 121 G----------KVDVKKDHSPHSINYVYGHGGVGVGVGVVGDDYQL-APKQNWSPMIPAS 180
                      +VDVKK+HSPH+ +YVYGHGG G GVG  GDDYQL A KQNWSPMI +S
Sbjct: 121 SNNNNNTQHQQQVDVKKEHSPHANSYVYGHGGGG-GVGG-GDDYQLVASKQNWSPMIQSS 180

Query: 181 SPHSCITTFSSNMLDFSNNNNN-KSPAHHSRPTHPQP--DRSSEVSTQIIYVMFKILCNS 240
           SP SC+T+FSSNMLDFSNNNNN KS A HSRP +P P  DRSSE             CNS
Sbjct: 181 SPQSCVTSFSSNMLDFSNNNNNNKSLADHSRPRNPPPVLDRSSE-------------CNS 240

[Close]
BLAST of CmoCh10G006710 vs. NCBI nr
Match: gi|659125552|ref|XP_008462743.1| (PREDICTED: transcription factor bHLH68 isoform X2 [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 1.8e-67
Identity = 173/310 (55.81%), Postives = 191/310 (61.61%), Query Frame = 1 

Query: 1   MNIGGLQSSVMQQMMMGSENPNWWNSNN-------------------------------- 60
           MN G LQSSVMQQMM GSENPNWWN  N                                
Sbjct: 1   MNRGVLQSSVMQQMM-GSENPNWWNMMNISGSMRSSTITQHSSPNHTNNSSSSSSNILFP 60

Query: 61  HSSLPFPSNSFYHLQHH--FPDSWSQLLLGDVVGEEDQKGCMPMFQQAKKLEDWGEETLN 120
           HSSLPFPSN +Y  Q H   P+SWSQLLLG +V E+DQKGCM MFQ +KKLEDW EE LN
Sbjct: 61  HSSLPFPSNCYYDAQDHQLIPESWSQLLLGGLVVEDDQKGCMGMFQ-SKKLEDWEEEILN 120

Query: 121 G----------KVDVKKDHSPHSINYVYGHGGVGVGVGVVGDDYQL-APKQNWSPMIPAS 180
                      +VDVKK+HSPH+ +YVYGHGG G GVG  GDDYQL A KQNWSPMI +S
Sbjct: 121 SNNNNNTQHQQQVDVKKEHSPHANSYVYGHGGGG-GVGG-GDDYQLVASKQNWSPMIQSS 180

Query: 181 SPHSCITTFSSNMLDFSNNNNN-KSPAHHSRPTHPQP--DRSSEVSTQIIYVMFKILCNS 240
           SP SC+T+FSSNMLDFSNNNNN KS A HSRP +P P  DRSSE             CNS
Sbjct: 181 SPQSCVTSFSSNMLDFSNNNNNNKSLADHSRPRNPPPVLDRSSE-------------CNS 240

The following BLAST results are available for this feature:
BLAST of CmoCh10G006710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH068_ARATH1.5e-1029.29Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2 SV=2[more]
BLAST of CmoCh10G006710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M120_CUCSA2.2e-6955.59Uncharacterized protein OS=Cucumis sativus GN=Csa_1G697530 PE=4 SV=1[more]
D7TBK3_VITVI2.2e-4043.94Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03560 PE=4 SV=... [more]
A5BQY3_VITVI8.3e-4043.60Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041271 PE=4 SV=1[more]
K7KRP2_SOYBN1.1e-3642.80Uncharacterized protein OS=Glycine max GN=GLYMA_05G229500 PE=4 SV=1[more]
A0A061GUE6_THECC2.1e-3540.79Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM... [more]
BLAST of CmoCh10G006710 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29100.18.6e-1229.29 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CmoCh10G006710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664438|ref|XP_011660295.1|4.8e-7359.79PREDICTED: transcription factor bHLH68 isoform X2 [Cucumis sativus][more]
gi|659125556|ref|XP_008462745.1|2.6e-7160.07PREDICTED: transcription factor bHLH68 isoform X4 [Cucumis melo][more]
gi|449449517|ref|XP_004142511.1|3.2e-6955.59PREDICTED: transcription factor bHLH68 isoform X1 [Cucumis sativus][more]
gi|659125554|ref|XP_008462744.1|1.8e-6755.81PREDICTED: transcription factor bHLH68 isoform X3 [Cucumis melo][more]
gi|659125552|ref|XP_008462743.1|1.8e-6755.81PREDICTED: transcription factor bHLH68 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G006710.1CmoCh10G006710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 211..238
score: 4.
NoneNo IPR availablePANTHERPTHR16223FAMILY NOT NAMEDcoord: 1..238
score: 1.1
NoneNo IPR availablePANTHERPTHR16223:SF50SUBFAMILY NOT NAMEDcoord: 1..238
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh10G006710CmaCh10G006370Cucurbita maxima (Rimu)cmacmoB067
CmoCh10G006710CmaCh11G006230Cucurbita maxima (Rimu)cmacmoB099
CmoCh10G006710Cla004098Watermelon (97103) v1cmowmB062
CmoCh10G006710MELO3C024696Melon (DHL92) v3.5.1cmomeB052
CmoCh10G006710ClCG06G008830Watermelon (Charleston Gray)cmowcgB063
CmoCh10G006710Lsi06G008480Bottle gourd (USVL1VR-Ls)cmolsiB060
CmoCh10G006710Cp4.1LG18g04170Cucurbita pepo (Zucchini)cmocpeB055
CmoCh10G006710Cp4.1LG04g10220Cucurbita pepo (Zucchini)cmocpeB069
CmoCh10G006710MELO3C024696.2Melon (DHL92) v3.6.1cmomedB055
CmoCh10G006710CsaV3_7G033460Cucumber (Chinese Long) v3cmocucB0088
CmoCh10G006710Cla97C06G118610Watermelon (97103) v2cmowmbB068
CmoCh10G006710Bhi02G000978Wax gourdcmowgoB0085
CmoCh10G006710Carg09839Silver-seed gourdcarcmoB0172
CmoCh10G006710Carg12215Silver-seed gourdcarcmoB0047
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh10G006710CmoCh11G006330Cucurbita moschata (Rifu)cmocmoB038
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh10G006710Silver-seed gourdcarcmoB0772
CmoCh10G006710Silver-seed gourdcarcmoB1205
CmoCh10G006710Silver-seed gourdcarcmoB1373
CmoCh10G006710Cucumber (Chinese Long) v3cmocucB0050
CmoCh10G006710Cucumber (Chinese Long) v3cmocucB0070
CmoCh10G006710Watermelon (97103) v2cmowmbB044
CmoCh10G006710Watermelon (97103) v2cmowmbB077
CmoCh10G006710Wax gourdcmowgoB0046
CmoCh10G006710Wax gourdcmowgoB0070
CmoCh10G006710Cucurbita moschata (Rifu)cmocmoB050
CmoCh10G006710Cucurbita moschata (Rifu)cmocmoB060
CmoCh10G006710Cucurbita moschata (Rifu)cmocmoB075
CmoCh10G006710Cucumber (Gy14) v1cgycmoB0279
CmoCh10G006710Cucumber (Gy14) v1cgycmoB0979
CmoCh10G006710Cucurbita maxima (Rimu)cmacmoB169
CmoCh10G006710Cucurbita maxima (Rimu)cmacmoB757
CmoCh10G006710Wild cucumber (PI 183967)cmocpiB066
CmoCh10G006710Wild cucumber (PI 183967)cmocpiB074
CmoCh10G006710Cucumber (Chinese Long) v2cmocuB065
CmoCh10G006710Cucumber (Chinese Long) v2cmocuB072
CmoCh10G006710Melon (DHL92) v3.5.1cmomeB049
CmoCh10G006710Melon (DHL92) v3.5.1cmomeB047
CmoCh10G006710Melon (DHL92) v3.5.1cmomeB067
CmoCh10G006710Watermelon (Charleston Gray)cmowcgB035
CmoCh10G006710Watermelon (Charleston Gray)cmowcgB039
CmoCh10G006710Watermelon (97103) v1cmowmB035
CmoCh10G006710Watermelon (97103) v1cmowmB059
CmoCh10G006710Cucurbita pepo (Zucchini)cmocpeB048
CmoCh10G006710Cucurbita pepo (Zucchini)cmocpeB076
CmoCh10G006710Bottle gourd (USVL1VR-Ls)cmolsiB035
CmoCh10G006710Bottle gourd (USVL1VR-Ls)cmolsiB037
CmoCh10G006710Cucumber (Gy14) v2cgybcmoB011
CmoCh10G006710Cucumber (Gy14) v2cgybcmoB146
CmoCh10G006710Melon (DHL92) v3.6.1cmomedB052
CmoCh10G006710Melon (DHL92) v3.6.1cmomedB073