CmoCh10G003530 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGCAGGGAACGATGCCGGATACACCTTCATCCCCGAGAGCGGTGGCCTTCTGGCGCTAATGGAGAATCTGCTTGGACTTCTCCGTATTCGCGTCATTCGTGGTGTCAATCTTGCTGTTCGTGACGTTCGTAGCAGCGATCCTTACGTTGTCGTCAAGATGGGAAAGCTAGTACGTATTTCTTTTCTGTTATTTCATGATCACCTTCGTTGTTGCTTCGATTTGGAGGTTTTGTTTCCTTATGTCTTTTGGAATGCTTCAAGATTGTTAAAGACATGTTGCTTTAGGTAGTAATTGGTTGAATTTGAAGCTGTTTTGGTGGTTATTTGGTGTGACTCGAAAAATGGCGCGAATGTTTGAATTGTTTTCATGGACGAAGTCTTTGAAACATGCGAGGAAGGATGGTTCGATAAGGGCTTGAAAAGTCTAATTAGATTCGCCTGTAGATTTTGCAACTTCTGGATCATCCTACACGAATGGAGATTTGGGAGGTGCAGAAATGAATGTTGTGTGGGGGAGGAGCTTAGAAGTTTTTGTATGCGAGTTTTTATCTTAAGGAATGAGATGAATAAAATTCCTGGCTGTTGAATTGTTAACTCATAAGTTTCGTAACTCTGTACGAACATCACGAGAAATTGTAGCAATAAATTGTGCTTTTTAGGCAGGTCAATCAATTACTTTGTAGATGTTAATGTTCCATTGAACTACGTCTTAGTTTTTGTTTCTTATAAGGAATGAACTCTCAAGTATTGCTGCTGCTTAATTCTTTTGTTCTTGTGAACTCTTGATGCAGAAACTGAAGACGCGGGTGATAAAGAAGGATATCAATCCTCACTGGAATGAAGATCTGACTCTTTCTGTCAGTGACCCAAGTCTTCCAATTAAGCTGGTAGTCCTTGTTAAACTCCATGATGATCCATGTATGAGAGAAATTTATTAATCAGTTTAGTTTTGTTATGCTTGTTGAACTCCATGATGATCCATGAATGCTTATTTTGTCCTTCAAAATTATATATATTTGATATGTTGCTCTGCCAGCAATGTACAACGCCTTTTAAACAATTTCCAAGTAGATATACACACAGAGTTACAAAGCTGACATGTTCTTGTTGTTGACCGATTTGTAACGGTTGATATTGCTAATCCAGGCTTAGGTCTTTTGCCATATTGTATTATGGGTTGGCCTTTATCTTTCGTTTTGTTTGATCAAAGCTATTTTAAGGAATCACTTATCTTGTTGCTATAGGAAAATTAACTCCCATTACTTCCTTTTTCGTTACCGTGTTTCCTAACATCGAATTTCGTTTCCAAATTCATCTTTGAGCTGGTTACAGACTGTTTACGATCACGACACGTTTACGAAGGATGACAAAATGGGGTATGCTGAGTTTGATATCAAATCATTTACGGATGCTCTGAAAATGAACTTGAGTAATCTTCCGAGTGGAACGACGATCTCACGAATGCTACCAAGCAGGCAAAACTGTCTTGCTGAAGAGAGCTGTGTGGTCTGGAAAGATGGCAAAGTAATTCAAGATATCTACCTTAGATTGAGAAATGTTGAATGCGGGGAAGTCGAAATTCAGCTGCAGTGGATTGATCTTCCAAACCACAAAGGCTGAAAGAAAGATCTGGTTTATCAGAGCATCATCCCTGCTGCTAGCTAGAGGTTACTGCTCGTTCCACTTCCCATCATTTTCCATTCTTCAAATTATTTCTATAGTAATATTCTTATGTGTCCTAGTCGATCTGCATAATGCTTGATCGTAGCTTGATTTTTATTCATGGATGATAGCCTCTGGTTTTGGCCAAGCTTTCTGATGGATATCGTAAATAAGTTGTTTTCTGATTCTGATTTTATTGGCAATAT GGAGCAGGGAACGATGCCGGATACACCTTCATCCCCGAGAGCGGTGGCCTTCTGGCGCTAATGGAGAATCTGCTTGGACTTCTCCGTATTCGCGTCATTCGTGGTGTCAATCTTGCTGTTCGTGACGTTCGTAGCAGCGATCCTTACGTTGTCGTCAAGATGGGAAAGCTAAAACTGAAGACGCGGGTGATAAAGAAGGATATCAATCCTCACTGGAATGAAGATCTGACTCTTTCTGTCAGTGACCCAAGTCTTCCAATTAAGCTGACTGTTTACGATCACGACACGTTTACGAAGGATGACAAAATGGGGTATGCTGAGTTTGATATCAAATCATTTACGGATGCTCTGAAAATGAACTTGAGTAATCTTCCGAGTGGAACGACGATCTCACGAATGCTACCAAGCAGGCAAAACTGTCTTGCTGAAGAGAGCTGTGTGGTCTGGAAAGATGGCAAAGTAATTCAAGATATCTACCTTAGATTGAGAAATGTTGAATGCGGGGAAGTCGAAATTCAGCTGCAGTGGATTGATCTTCCAAACCACAAAGGCTGAAAGAAAGATCTGGTTTATCAGAGCATCATCCCTGCTGCTAGCTAGAGGTTACTGCTCGTTCCACTTCCCATCATTTTCCATTCTTCAAATTATTTCTATAGTAATATTCTTATGTGTCCTAGTCGATCTGCATAATGCTTGATCGTAGCTTGATTTTTATTCATGGATGATAGCCTCTGGTTTTGGCCAAGCTTTCTGATGGATATCGTAAATAAGTTGTTTTCTGATTCTGATTTTATTGGCAATAT GGAGCAGGGAACGATGCCGGATACACCTTCATCCCCGAGAGCGGTGGCCTTCTGGCGCTAATGGAGAATCTGCTTGGACTTCTCCGTATTCGCGTCATTCGTGGTGTCAATCTTGCTGTTCGTGACGTTCGTAGCAGCGATCCTTACGTTGTCGTCAAGATGGGAAAGCTAAAACTGAAGACGCGGGTGATAAAGAAGGATATCAATCCTCACTGGAATGAAGATCTGACTCTTTCTGTCAGTGACCCAAGTCTTCCAATTAAGCTGACTGTTTACGATCACGACACGTTTACGAAGGATGACAAAATGGGGTATGCTGAGTTTGATATCAAATCATTTACGGATGCTCTGAAAATGAACTTGAGTAATCTTCCGAGTGGAACGACGATCTCACGAATGCTACCAAGCAGGCAAAACTGTCTTGCTGAAGAGAGCTGTGTGGTCTGGAAAGATGGCAAAGTAATTCAAGATATCTACCTTAGATTGAGAAATGTTGAATGCGGGGAAGTCGAAATTCAGCTGCAGTGGATTGATCTTCCAAACCACAAAGGCTGA
BLAST of CmoCh10G003530 vs. Swiss-Prot
Match: CAR4_ARATH (Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana GN=CAR4 PE=1 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 3.5e-65 Identity = 119/166 (71.69%), Postives = 141/166 (84.94%), Query Frame = 1
BLAST of CmoCh10G003530 vs. Swiss-Prot
Match: CAR5_ARATH (Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana GN=CAR5 PE=2 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 3.5e-65 Identity = 121/162 (74.69%), Postives = 141/162 (87.04%), Query Frame = 1
BLAST of CmoCh10G003530 vs. Swiss-Prot
Match: CAR3_ARATH (Protein C2-DOMAIN ABA-RELATED 3 OS=Arabidopsis thaliana GN=CAR3 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 3.7e-59 Identity = 108/167 (64.67%), Postives = 138/167 (82.63%), Query Frame = 1
BLAST of CmoCh10G003530 vs. Swiss-Prot
Match: CAR1_ARATH (Protein C2-DOMAIN ABA-RELATED 1 OS=Arabidopsis thaliana GN=CAR1 PE=1 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 5.5e-55 Identity = 102/167 (61.08%), Postives = 132/167 (79.04%), Query Frame = 1
BLAST of CmoCh10G003530 vs. Swiss-Prot
Match: GAP1_ORYSJ (GTPase activating protein 1 OS=Oryza sativa subsp. japonica GN=GAP1 PE=1 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 9.5e-55 Identity = 96/165 (58.18%), Postives = 132/165 (80.00%), Query Frame = 1
BLAST of CmoCh10G003530 vs. TrEMBL
Match: A0A0A0LV32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025080 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 6.6e-79 Identity = 152/193 (78.76%), Postives = 163/193 (84.46%), Query Frame = 1
BLAST of CmoCh10G003530 vs. TrEMBL
Match: M5WAW5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012140mg PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 3.1e-73 Identity = 136/173 (78.61%), Postives = 151/173 (87.28%), Query Frame = 1
BLAST of CmoCh10G003530 vs. TrEMBL
Match: A0A059D0S8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00949 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 9.2e-73 Identity = 137/175 (78.29%), Postives = 153/175 (87.43%), Query Frame = 1
BLAST of CmoCh10G003530 vs. TrEMBL
Match: A0A061FUY7_THECC (Calcium-dependent lipid-binding (CaLB domain) family protein OS=Theobroma cacao GN=TCM_012850 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 9.2e-73 Identity = 135/178 (75.84%), Postives = 154/178 (86.52%), Query Frame = 1
BLAST of CmoCh10G003530 vs. TrEMBL
Match: V4UKT4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009524mg PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.0e-71 Identity = 130/166 (78.31%), Postives = 152/166 (91.57%), Query Frame = 1
BLAST of CmoCh10G003530 vs. TAIR10
Match: AT3G17980.1 (AT3G17980.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 249.2 bits (635), Expect = 2.0e-66 Identity = 119/166 (71.69%), Postives = 141/166 (84.94%), Query Frame = 1
BLAST of CmoCh10G003530 vs. TAIR10
Match: AT1G48590.2 (AT1G48590.2 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 249.2 bits (635), Expect = 2.0e-66 Identity = 121/162 (74.69%), Postives = 141/162 (87.04%), Query Frame = 1
BLAST of CmoCh10G003530 vs. TAIR10
Match: AT1G73580.1 (AT1G73580.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 229.2 bits (583), Expect = 2.1e-60 Identity = 108/167 (64.67%), Postives = 138/167 (82.63%), Query Frame = 1
BLAST of CmoCh10G003530 vs. TAIR10
Match: AT1G66360.1 (AT1G66360.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 211.8 bits (538), Expect = 3.5e-55 Identity = 98/161 (60.87%), Postives = 133/161 (82.61%), Query Frame = 1
BLAST of CmoCh10G003530 vs. TAIR10
Match: AT1G70810.1 (AT1G70810.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 208.4 bits (529), Expect = 3.8e-54 Identity = 98/164 (59.76%), Postives = 124/164 (75.61%), Query Frame = 1
BLAST of CmoCh10G003530 vs. NCBI nr
Match: gi|659106973|ref|XP_008453481.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cucumis melo]) HSP 1 Score: 319.3 bits (817), Expect = 4.4e-84 Identity = 153/173 (88.44%), Postives = 167/173 (96.53%), Query Frame = 1
BLAST of CmoCh10G003530 vs. NCBI nr
Match: gi|449439137|ref|XP_004137344.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cucumis sativus]) HSP 1 Score: 313.5 bits (802), Expect = 2.4e-82 Identity = 152/173 (87.86%), Postives = 163/173 (94.22%), Query Frame = 1
BLAST of CmoCh10G003530 vs. NCBI nr
Match: gi|700208780|gb|KGN63876.1| (hypothetical protein Csa_1G025080 [Cucumis sativus]) HSP 1 Score: 301.6 bits (771), Expect = 9.4e-79 Identity = 152/193 (78.76%), Postives = 163/193 (84.46%), Query Frame = 1
BLAST of CmoCh10G003530 vs. NCBI nr
Match: gi|658001901|ref|XP_008393427.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Malus domestica]) HSP 1 Score: 285.4 bits (729), Expect = 7.0e-74 Identity = 136/173 (78.61%), Postives = 152/173 (87.86%), Query Frame = 1
BLAST of CmoCh10G003530 vs. NCBI nr
Match: gi|657966332|ref|XP_008374850.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Malus domestica]) HSP 1 Score: 285.4 bits (729), Expect = 7.0e-74 Identity = 136/173 (78.61%), Postives = 153/173 (88.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |