CmoCh10G002980 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh10G002980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Sterile alpha motif (SAM) domain-containing protein
Location	Cmo_Chr10 : 1329081 .. 1329983 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGTTATGGATGTGATGAGCTCCAAGAGACAAAGGCGTCCAAATGTAAGGCTAGGGGAAATTGGGGATATATCTGCGGCTTGGGCTTGTGGGTTTTCTCATAGCACTAGAGATAAGTTAGCTCATAGGGAATGGAAACATGATTTACTCCAAACTGTGGGTGATGATGATGATAACCCCATTGTTTTTGGGGACTTGGAGCCTTCGACTCCCAAGCTCACTGTCTCTGAGTTGGGTGCCTCTCCACAAATTTCAACAGAGTTGCAGCAGAATGGAGACAACAATAATAACCCCAATTCTTCTGCATTGCCTTTGGAATGTCCTCCAACTTCTGCTGGACTGAAGTTTAGTGATGTGACCAGGAAGTGTAGAAATATGAAGCGTCGGGGGCGTAGTCGAAACGTTGGCTACGTCGTTCTTGGTGGCAGTTGGAGCTCGAAACATAGCTCAGATGACTGCTCGATGAATGAGAAGGAATGTGAGGGGACACGTAATTCTGCTAATGGTTATGGTGACTTCTCTGATCACCAGACACCAACCACTAGTAAAGAGGAATGTGGCATTGATCAACCCTCGACACGACAAGATCGTGAGTTAAACAACGATTCGCAGTTCACTGGTGAGAAGGGTAGACACAAATCTGGCATTGTGCAGGATCAAATGAGATTAAAAGATGACGATACGAATGCTGTCAGTAGATGGTTAGAGGAGGTAGGATTTGGCAAGTATGCTGGGGTGTTCGAGATGCACGAGGTGGATGAGGAGGCTTTGCCACTGCTGACCATTGAAGATCTCAAAGAGATTGGCGTGTTTTCTGTCGGCTCTCGGAGGAAGTTGTATAATGCAATCCAACAGTTAAGAGAAGGCGGAGGAGAAGGAGAAGGAGAAGGAGAGGAATAA

mRNA sequence

ATGATGGTTATGGATGTGATGAGCTCCAAGAGACAAAGGCGTCCAAATGTAAGGCTAGGGGAAATTGGGGATATATCTGCGGCTTGGGCTTGTGGGTTTTCTCATAGCACTAGAGATAAGTTAGCTCATAGGGAATGGAAACATGATTTACTCCAAACTGTGGGTGATGATGATGATAACCCCATTGTTTTTGGGGACTTGGAGCCTTCGACTCCCAAGCTCACTGTCTCTGAGTTGGGTGCCTCTCCACAAATTTCAACAGAGTTGCAGCAGAATGGAGACAACAATAATAACCCCAATTCTTCTGCATTGCCTTTGGAATGTCCTCCAACTTCTGCTGGACTGAAGTTTAGTGATGTGACCAGGAAGTGTAGAAATATGAAGCGTCGGGGGCGTAGTCGAAACGTTGGCTACGTCGTTCTTGGTGGCAGTTGGAGCTCGAAACATAGCTCAGATGACTGCTCGATGAATGAGAAGGAATGTGAGGGGACACGTAATTCTGCTAATGGTTATGGTGACTTCTCTGATCACCAGACACCAACCACTAGTAAAGAGGAATGTGGCATTGATCAACCCTCGACACGACAAGATCGTGAGTTAAACAACGATTCGCAGTTCACTGGTGAGAAGGGTAGACACAAATCTGGCATTGTGCAGGATCAAATGAGATTAAAAGATGACGATACGAATGCTGTCAGTAGATGGTTAGAGGAGGTAGGATTTGGCAAGTATGCTGGGGTGTTCGAGATGCACGAGGTGGATGAGGAGGCTTTGCCACTGCTGACCATTGAAGATCTCAAAGAGATTGGCGTGTTTTCTGTCGGCTCTCGGAGGAAGTTGTATAATGCAATCCAACAGTTAAGAGAAGGCGGAGGAGAAGGAGAAGGAGAAGGAGAGGAATAA

Coding sequence (CDS)

ATGATGGTTATGGATGTGATGAGCTCCAAGAGACAAAGGCGTCCAAATGTAAGGCTAGGGGAAATTGGGGATATATCTGCGGCTTGGGCTTGTGGGTTTTCTCATAGCACTAGAGATAAGTTAGCTCATAGGGAATGGAAACATGATTTACTCCAAACTGTGGGTGATGATGATGATAACCCCATTGTTTTTGGGGACTTGGAGCCTTCGACTCCCAAGCTCACTGTCTCTGAGTTGGGTGCCTCTCCACAAATTTCAACAGAGTTGCAGCAGAATGGAGACAACAATAATAACCCCAATTCTTCTGCATTGCCTTTGGAATGTCCTCCAACTTCTGCTGGACTGAAGTTTAGTGATGTGACCAGGAAGTGTAGAAATATGAAGCGTCGGGGGCGTAGTCGAAACGTTGGCTACGTCGTTCTTGGTGGCAGTTGGAGCTCGAAACATAGCTCAGATGACTGCTCGATGAATGAGAAGGAATGTGAGGGGACACGTAATTCTGCTAATGGTTATGGTGACTTCTCTGATCACCAGACACCAACCACTAGTAAAGAGGAATGTGGCATTGATCAACCCTCGACACGACAAGATCGTGAGTTAAACAACGATTCGCAGTTCACTGGTGAGAAGGGTAGACACAAATCTGGCATTGTGCAGGATCAAATGAGATTAAAAGATGACGATACGAATGCTGTCAGTAGATGGTTAGAGGAGGTAGGATTTGGCAAGTATGCTGGGGTGTTCGAGATGCACGAGGTGGATGAGGAGGCTTTGCCACTGCTGACCATTGAAGATCTCAAAGAGATTGGCGTGTTTTCTGTCGGCTCTCGGAGGAAGTTGTATAATGCAATCCAACAGTTAAGAGAAGGCGGAGGAGAAGGAGAAGGAGAAGGAGAGGAATAA

Homology

[Close]

BLAST of CmoCh10G002980 vs. TrEMBL
Match: A0A0A0LUR2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015600 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 8.6e-129
Identity = 241/304 (79.28%), Postives = 266/304 (87.50%), Query Frame = 1


Query: 1   MMVMDVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTRDKLAHREWKHDLLQTVGDDDDN 60
           M+VM+VMSSKRQRRPNVRLGEIGDISAAWACGFSHSTR+KLAH+EWKH+L QTV +++DN
Sbjct: 1   MLVMNVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTREKLAHKEWKHELDQTV-ENEDN 60

Query: 61  PIVFGDLEPSTPKLTVSELGASPQISTELQQNGDNNNNPNSSALPLECP-------PTSA 120
           PIVFG+LEPS+PKLTVSELG SPQISTELQ + +N NNPNSS LPLECP        T  
Sbjct: 61  PIVFGELEPSSPKLTVSELGVSPQISTELQLHEENKNNPNSSDLPLECPISTELIDVTKP 120

Query: 121 GLKFSDVTRKCRNMKRRGRSRNVGYVVLGGSWSSKHSSDDCSMNEKECEGTRNSANGYGD 180
            LKFSDVTRKCR+ KRRGRS+NVGY +L GSWSSKHSSD  SM+EKECEGT NSANG+GD
Sbjct: 121 RLKFSDVTRKCRDKKRRGRSKNVGYAILPGSWSSKHSSDGYSMDEKECEGTGNSANGFGD 180

Query: 181 FSDHQTPTTSKEECGIDQPSTRQDRELNNDSQFTGEKGRHKSGIVQDQMRLKDDDTNAVS 240
            SDHQTPTTSKEECGIDQP TRQ+RELNN ++FT EK RHKSG +  +MRL+DD TN VS
Sbjct: 181 SSDHQTPTTSKEECGIDQP-TRQERELNNAARFTSEKARHKSGNMLVKMRLEDDGTNVVS 240

Query: 241 RWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVGSRRKLYNAIQQLREGGGE 298
           RWLE VGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVG+RRKLYNAI+QLREGG E
Sbjct: 241 RWLEGVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVGTRRKLYNAIRQLREGGEE 300

[Close]

BLAST of CmoCh10G002980 vs. TrEMBL
Match: A0A061FY61_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_014388 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 7.0e-62
Identity = 148/316 (46.84%), Postives = 192/316 (60.76%), Query Frame = 1


Query: 2   MVMDVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTRDKLAHREWKHDLLQTVGDDDDNP 61
           M++  M+SKRQRRPNVRLGEIGD+SAA+AC FS  T++ L H+ WK D L   G++    
Sbjct: 1   MLVLSMNSKRQRRPNVRLGEIGDVSAAFACRFSQKTKESLGHKRWKPDFLNPQGNELTTV 60

Query: 62  IVFGDLEPSTPKLTVSELGASPQISTELQQNGDNNNNPNSSALPL------ECPPTSAGL 121
           + F   E  +P   +S  G SP++S +LQQN +N N PNSS          E     + L
Sbjct: 61  VGFSKEE--SPDFLISGTGVSPRMSADLQQNRENKN-PNSSKSGFDVVNADEIDMMKSSL 120

Query: 122 KFSDVTRKCRNMKRRGRSRNVGYVVLGGSW------SSKHSSDDCSMN-EKECEGTRNSA 181
            F  +TRK R MKRRGRSR     V G +W      S + S +D   + EKE  G R++A
Sbjct: 121 NFGTITRKSRVMKRRGRSREGNNCVFGSAWTWSTKLSPEFSGEDRKEHGEKEFMGMRSNA 180

Query: 182 -------NGYGDFSDHQTPTTSKEEC--GIDQPSTRQDRELNNDSQ-----FTGEKGRHK 241
                  NG+ D SDH+TP TSK+ C   +D+P     ++ N D       + G     +
Sbjct: 181 CEDYCPVNGFQDISDHETPATSKDACEYDVDEPGYDSWQQGNGDDYWKDACYEGNNVFFR 240

Query: 242 SGIVQDQMRLKDDDTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSV 291
           SG   DQMR   +D  +V RWLE++GFG+YAG+FEMHEVDEE LPLLT++DLKE+GVF+V
Sbjct: 241 SGDGWDQMRYTCNDVTSVGRWLEDLGFGRYAGIFEMHEVDEETLPLLTLDDLKEMGVFAV 300

[Close]

BLAST of CmoCh10G002980 vs. TrEMBL
Match: A0A067FE27_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020806mg PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.5e-59
Identity = 149/317 (47.00%), Postives = 184/317 (58.04%), Query Frame = 1


Query: 2   MVMDVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTRDKLAHREWKHDLLQTVGDDDDNP 61
           M++  M+SKRQRRPNVRLGE+GD+ AA+ACGFS  + + L  + WKHD +    +   N 
Sbjct: 1   MLVLSMNSKRQRRPNVRLGEVGDVPAAFACGFSQKSSENLGLQRWKHDFVNHPEETGHN- 60

Query: 62  IVFGDLEPSTPKLTVSEL----GASPQISTELQQNGDNNNNPNSSALPLEC------PPT 121
           +  G  E  + + TV++     G SP+ S +LQQN +N N PNSS L  E         T
Sbjct: 61  LSLGFSEQKSSEFTVTDPEHDPGVSPRNSADLQQNMENKN-PNSSKLAFETVNSDIVDGT 120

Query: 122 SAGLKFSDVTRKCRNMKRRGRSRNVGYVVLGGSWSSKHSSDDCSMNEKECEG------TR 181
           ++ L F  VTRK R MKRR RS  V   V G +W+SK S    S   KEC G      T 
Sbjct: 121 NSALDFGTVTRKSRVMKRRSRSSRVKSNVFGSAWNSKLSPQFSSEEAKECGGKEIVGFTS 180

Query: 182 NSANGY------GDFSDHQTPTTSKEECGIDQPSTRQDREL--------NNDSQFTGEKG 241
           N+ +GY       DFSD  TP TSKE C  +   T  D            +D+ +     
Sbjct: 181 NACDGYYPENVCKDFSDRGTPATSKEACVYEVEETTYDAWQPGNSNDCWKDDACYEENDA 240

Query: 242 RHKSGIVQDQMRLKDDDTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGV 289
             KSGI  +       D N V RWLEE+GFGKYAG+FEMHEVDEE LPLLT+EDLKE+GV
Sbjct: 241 FIKSGIEWNATGCGGTDVNTVKRWLEELGFGKYAGMFEMHEVDEETLPLLTLEDLKEMGV 300

[Close]

BLAST of CmoCh10G002980 vs. TrEMBL
Match: V4T1L0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021188mg PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.5e-59
Identity = 149/317 (47.00%), Postives = 184/317 (58.04%), Query Frame = 1


Query: 2   MVMDVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTRDKLAHREWKHDLLQTVGDDDDNP 61
           M++  M+SKRQRRPNVRLGE+GD+ AA+ACGFS  + + L  + WKHD +    +   N 
Sbjct: 1   MLVLSMNSKRQRRPNVRLGEVGDVPAAFACGFSQKSSENLGLQRWKHDFVNHPEETGHN- 60

Query: 62  IVFGDLEPSTPKLTVSEL----GASPQISTELQQNGDNNNNPNSSALPLEC------PPT 121
           +  G  E  + + TV++     G SP+ S +LQQN +N N PNSS L  E         T
Sbjct: 61  LSLGFSEQKSSEFTVTDPEHDPGVSPRNSADLQQNMENKN-PNSSKLAFETVNSDIVDGT 120

Query: 122 SAGLKFSDVTRKCRNMKRRGRSRNVGYVVLGGSWSSKHSSDDCSMNEKECEG------TR 181
           ++ L F  VTRK R MKRR RS  V   V G +W+SK S    S   KEC G      T 
Sbjct: 121 NSALDFGTVTRKSRVMKRRSRSSRVKSNVFGSAWNSKLSPQFSSEEAKECGGKEIVGFTS 180

Query: 182 NSANGY------GDFSDHQTPTTSKEECGIDQPSTRQDREL--------NNDSQFTGEKG 241
           N+ +GY       DFSD  TP TSKE C  +   T  D            +D+ +     
Sbjct: 181 NACDGYYPDNVCKDFSDRGTPATSKEACVYEVEETTYDAWQPGNSNDCWKDDACYEENDA 240

Query: 242 RHKSGIVQDQMRLKDDDTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGV 289
             KSGI  +       D N V RWLEE+GFGKYAG+FEMHEVDEE LPLLT+EDLKE+GV
Sbjct: 241 FIKSGIEWNATGCGGTDVNTVKRWLEELGFGKYAGMFEMHEVDEETLPLLTLEDLKEMGV 300

[Close]

BLAST of CmoCh10G002980 vs. TrEMBL
Match: A0A067K588_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11767 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 9.4e-59
Identity = 147/309 (47.57%), Postives = 180/309 (58.25%), Query Frame = 1


Query: 7   MSSKRQRRPNVRLGEIGDISAAWACGFSHSTRDKLAHREWKHDLLQTVGDDDDNPIVFGD 66
           M+SKRQRR NVRLGEIGDI AA+AC FS  T++ L  +  + D+L    +D     ++G 
Sbjct: 1   MNSKRQRRSNVRLGEIGDIPAAFACRFSQKTKENLGRKSSESDVLNP--NDTQQSHIYGF 60

Query: 67  LEPSTPKLTVSELGASPQISTELQQNGDNNNNPNSSALPLECPP---TSAGLKFSDVTRK 126
              ++P+  V   G S +IS +LQQN +N N PNSS    E      T   L F  +TRK
Sbjct: 61  AMQTSPEFVVLGPGVSSRISADLQQNRENKN-PNSSKSAFELVSSDMTKLKLNFGTITRK 120

Query: 127 CRNMKRRGRSRNVGYVVLGGSWSSKHSSD-------DCSMNE------KECEGTRNSANG 186
           CR MKRRG S      V G +WSSK S         DCS+ E       EC    N +  
Sbjct: 121 CRVMKRRGHSTKRTNNVFGSAWSSKLSPQFSNEDRKDCSVKEFVSFTSDECNDYYNDSV- 180

Query: 187 YGDFSDHQTPTTSKEECGIDQPSTRQDRELNN--------DSQFTGEKGRHKSGIVQDQM 246
           + D SDH+TP TSKE C  +      D  L+         D+   G      SG V D+M
Sbjct: 181 FKDLSDHETPATSKEGCEFEMDEPAYDMRLSRNYNEFCLEDACNEGNNASPVSGPVWDEM 240

Query: 247 RLKDDDTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVGSRRKLYN 292
           +    D NAV+RWLEE GFGKYA +FEMHEVDEEALPLLT+EDLKEIGV +VG RRKLYN
Sbjct: 241 KSDGGDVNAVTRWLEEQGFGKYASLFEMHEVDEEALPLLTLEDLKEIGVSAVGPRRKLYN 300

[Close]

BLAST of CmoCh10G002980 vs. TAIR10
Match: AT3G48800.1 (AT3G48800.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15
Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = 1


Query: 144 SWSSKHSSDDCSMNEKECEGTRNSANGYGDFSDHQTPTTSKEECGIDQPSTRQDRELNND 203
           +W SK    D     ++  G      G+ DFS   + +  KEE          DR+    
Sbjct: 143 NWVSKVGDGD-----EKISGGEELEGGFRDFSREDSESPIKEES--------LDRDGGGF 202

Query: 204 SQFTGEKGRHKSGIVQDQMRLKDDDTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTI 263
                 +  + SG  + +  +       V  WL+E+G G+Y  +FE+HEVDEE LPLLT+
Sbjct: 203 YGRRRYESNNSSGNREFESNMDGGGKEGVKIWLQELGLGRYWPMFEIHEVDEEVLPLLTL 262

Query: 264 EDLKEIGVFSVGSRRKLYNAIQQL 288
           EDLK++G+ +VGSRRK++ AIQ+L
Sbjct: 263 EDLKDMGINAVGSRRKMFCAIQKL 273

[Close]

BLAST of CmoCh10G002980 vs. TAIR10
Match: AT5G23680.1 (AT5G23680.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-15
Identity = 52/130 (40.00%), Postives = 72/130 (55.38%), Query Frame = 1


Query: 158 EKECEGTRNSANGYGDFSDHQTPTTSKEECGIDQPSTRQDRELNNDSQFTGEKGRHKSGI 217
           E+E +       G+ DFS   + +  KE    +     ++ EL  D Q     GR K G 
Sbjct: 183 EEEEDEELGGEEGFRDFSREDSESPMKERRRYEN----REVELLGDWQ---SGGRGKEG- 242

Query: 218 VQDQMRLKDDDTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVGSR 277
                         V  WL+E+G G+Y  +FEMHEVDE+ LPLLT+EDLK++G+ +VGSR
Sbjct: 243 --------------VKIWLQELGLGRYWPMFEMHEVDEQVLPLLTLEDLKDMGINAVGSR 290

Query: 278 RKLYNAIQQL 288
           RK+Y AIQ+L
Sbjct: 303 RKMYCAIQKL 290

[Close]

BLAST of CmoCh10G002980 vs. TAIR10
Match: AT2G45700.1 (AT2G45700.1 sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-08
Identity = 26/62 (41.94%), Postives = 38/62 (61.29%), Query Frame = 1


Query: 228 DTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVGSRRKLYNAIQQL 287
           D + V +WL  +G  KY  VF   E+D + L  LT EDL  IG+ S+G R+K+ NA+  +
Sbjct: 240 DLSPVLKWLRSLGLAKYEDVFIREEIDWDTLQSLTEEDLLSIGITSLGPRKKIVNALSGV 299

Query: 288 RE 290
           R+
Sbjct: 300 RD 301

[Close]

BLAST of CmoCh10G002980 vs. NCBI nr
Match: gi|449441115|ref|XP_004138329.1| (PREDICTED: uncharacterized protein LOC101220579 [Cucumis sativus])

HSP 1 Score: 468.0 bits (1203), Expect = 1.2e-128
Identity = 241/304 (79.28%), Postives = 266/304 (87.50%), Query Frame = 1


Query: 1   MMVMDVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTRDKLAHREWKHDLLQTVGDDDDN 60
           M+VM+VMSSKRQRRPNVRLGEIGDISAAWACGFSHSTR+KLAH+EWKH+L QTV +++DN
Sbjct: 1   MLVMNVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTREKLAHKEWKHELDQTV-ENEDN 60

Query: 61  PIVFGDLEPSTPKLTVSELGASPQISTELQQNGDNNNNPNSSALPLECP-------PTSA 120
           PIVFG+LEPS+PKLTVSELG SPQISTELQ + +N NNPNSS LPLECP        T  
Sbjct: 61  PIVFGELEPSSPKLTVSELGVSPQISTELQLHEENKNNPNSSDLPLECPISTELIDVTKP 120

Query: 121 GLKFSDVTRKCRNMKRRGRSRNVGYVVLGGSWSSKHSSDDCSMNEKECEGTRNSANGYGD 180
            LKFSDVTRKCR+ KRRGRS+NVGY +L GSWSSKHSSD  SM+EKECEGT NSANG+GD
Sbjct: 121 RLKFSDVTRKCRDKKRRGRSKNVGYAILPGSWSSKHSSDGYSMDEKECEGTGNSANGFGD 180

Query: 181 FSDHQTPTTSKEECGIDQPSTRQDRELNNDSQFTGEKGRHKSGIVQDQMRLKDDDTNAVS 240
            SDHQTPTTSKEECGIDQP TRQ+RELNN ++FT EK RHKSG +  +MRL+DD TN VS
Sbjct: 181 SSDHQTPTTSKEECGIDQP-TRQERELNNAARFTSEKARHKSGNMLVKMRLEDDGTNVVS 240

Query: 241 RWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVGSRRKLYNAIQQLREGGGE 298
           RWLE VGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVG+RRKLYNAI+QLREGG E
Sbjct: 241 RWLEGVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVGTRRKLYNAIRQLREGGEE 300

[Close]

BLAST of CmoCh10G002980 vs. NCBI nr
Match: gi|659106405|ref|XP_008453318.1| (PREDICTED: ankyrin repeat and SAM domain-containing protein 6-like [Cucumis melo])

HSP 1 Score: 463.8 bits (1192), Expect = 2.3e-127
Identity = 241/307 (78.50%), Postives = 266/307 (86.64%), Query Frame = 1


Query: 1   MMVMDVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTRDKLAHREWKHDLLQTVGDDDDN 60
           M+VM+VMSSKRQRRPNVRLGEIGDISAAWACGFSHSTR+KLA +EWKH+L Q+V D++DN
Sbjct: 1   MLVMNVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTREKLAQKEWKHELDQSV-DNEDN 60

Query: 61  PIVFGDLEPSTPKLTVSELGASPQISTELQQNGDNNNNPNSSALPLECP-------PTSA 120
           PIVFG+LEPS+PKLTVSELG SPQISTELQ N +N NNPN S LPLECP        T +
Sbjct: 61  PIVFGELEPSSPKLTVSELGVSPQISTELQLNEENKNNPNFSELPLECPISTELIDMTKS 120

Query: 121 GLKFSDVTRKCRNMKRRGRSRNVGYVVLGGSWSSKHSSDDCSMNEKECEGTRNSANGYGD 180
            LKFSDVTRKCR+ KRRGRS+NVGY +L GSWSSKHSSD  S++EKECEGT NSANG+GD
Sbjct: 121 SLKFSDVTRKCRDKKRRGRSKNVGYAILPGSWSSKHSSDGYSIDEKECEGTGNSANGFGD 180

Query: 181 FSDHQTPTTSKEECGIDQPSTRQDRELNNDSQFTGEKGRHKSGIVQDQMRLKDDDTNAVS 240
            SDHQTPTTSKEECGIDQP TRQ+RELNN ++FT EK R KSG V  +MRL+D+DTN VS
Sbjct: 181 SSDHQTPTTSKEECGIDQP-TRQERELNNAARFTSEKARRKSGNVLVKMRLEDNDTNVVS 240

Query: 241 RWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVGSRRKLYNAIQQLREGGGE 300
           RWLEEVGFGKYAGVFE+HEVDEEALPLLTIEDLKEIGVFSVGSRRKLYNAIQQLR G  E
Sbjct: 241 RWLEEVGFGKYAGVFEIHEVDEEALPLLTIEDLKEIGVFSVGSRRKLYNAIQQLRGGEEE 300

[Close]

BLAST of CmoCh10G002980 vs. NCBI nr
Match: gi|1009132208|ref|XP_015883260.1| (PREDICTED: uncharacterized protein LOC107419052 [Ziziphus jujuba])

HSP 1 Score: 246.9 bits (629), Expect = 4.5e-62
Identity = 148/315 (46.98%), Postives = 189/315 (60.00%), Query Frame = 1


Query: 2   MVMDVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTRDKLAHREWKHDLLQTVGDDDDNP 61
           M++  M+ KRQRRPNVRLGEIGD+SAA+ CGFS + ++K  H++WK D +  V +   NP
Sbjct: 1   MLVLSMNPKRQRRPNVRLGEIGDVSAAFTCGFSQNAKEKSVHKKWKIDFVNPV-ETKHNP 60

Query: 62  IVFGDLEPSTPKLTVSELGASPQISTELQQNGDNNNNPNSSALPLECPP------TSAGL 121
           I     E  + + T+S+ G SP+IS ++QQN +NNN PNSS   +E         T + L
Sbjct: 61  IYGFSSEQKSSEFTISDPGVSPRISVDMQQNRENNN-PNSSKWAVESSSLDEIDMTRSKL 120

Query: 122 KFSDVTRKCRNMKRRGRSRNVGYVVLGGSWSSKHS-----SDDCSMNEKECEGTRNS--- 181
            FS++TRKCR MKRRG+S+     V G +W SK S      D+    EKE +G   +   
Sbjct: 121 NFSNITRKCRVMKRRGQSKRGNKSVFGSAWGSKLSPEFSGQDERQCGEKELDGYAFNICD 180

Query: 182 ----ANGYGDFSDHQTPTTSKEECGID--------QPSTRQDRELNNDSQFTGEKGRHKS 241
                +G+ D SDH+TP TSKE C  +         P        N D  F    G  K 
Sbjct: 181 DYCPGDGFKDPSDHETPATSKEACEFNVYEPIGGVPPQGNFGDYWNGDVCFEANDGCTKC 240

Query: 242 GIVQDQMRLKDDDTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVG 291
             V D M  +  D N V +WLEE+GFGKYA VFEMHEVDEEAL LLT+EDLKE+GVF+VG
Sbjct: 241 DGVLDDMEFEGSDINCVRKWLEELGFGKYADVFEMHEVDEEALLLLTLEDLKEMGVFAVG 300

[Close]

BLAST of CmoCh10G002980 vs. NCBI nr
Match: gi|590669053|ref|XP_007037665.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 245.7 bits (626), Expect = 1.0e-61
Identity = 148/316 (46.84%), Postives = 192/316 (60.76%), Query Frame = 1


Query: 2   MVMDVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTRDKLAHREWKHDLLQTVGDDDDNP 61
           M++  M+SKRQRRPNVRLGEIGD+SAA+AC FS  T++ L H+ WK D L   G++    
Sbjct: 1   MLVLSMNSKRQRRPNVRLGEIGDVSAAFACRFSQKTKESLGHKRWKPDFLNPQGNELTTV 60

Query: 62  IVFGDLEPSTPKLTVSELGASPQISTELQQNGDNNNNPNSSALPL------ECPPTSAGL 121
           + F   E  +P   +S  G SP++S +LQQN +N N PNSS          E     + L
Sbjct: 61  VGFSKEE--SPDFLISGTGVSPRMSADLQQNRENKN-PNSSKSGFDVVNADEIDMMKSSL 120

Query: 122 KFSDVTRKCRNMKRRGRSRNVGYVVLGGSW------SSKHSSDDCSMN-EKECEGTRNSA 181
            F  +TRK R MKRRGRSR     V G +W      S + S +D   + EKE  G R++A
Sbjct: 121 NFGTITRKSRVMKRRGRSREGNNCVFGSAWTWSTKLSPEFSGEDRKEHGEKEFMGMRSNA 180

Query: 182 -------NGYGDFSDHQTPTTSKEEC--GIDQPSTRQDRELNNDSQ-----FTGEKGRHK 241
                  NG+ D SDH+TP TSK+ C   +D+P     ++ N D       + G     +
Sbjct: 181 CEDYCPVNGFQDISDHETPATSKDACEYDVDEPGYDSWQQGNGDDYWKDACYEGNNVFFR 240

Query: 242 SGIVQDQMRLKDDDTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSV 291
           SG   DQMR   +D  +V RWLE++GFG+YAG+FEMHEVDEE LPLLT++DLKE+GVF+V
Sbjct: 241 SGDGWDQMRYTCNDVTSVGRWLEDLGFGRYAGIFEMHEVDEETLPLLTLDDLKEMGVFAV 300

[Close]

BLAST of CmoCh10G002980 vs. NCBI nr
Match: gi|641846762|gb|KDO65644.1| (hypothetical protein CISIN_1g020806mg [Citrus sinensis])

HSP 1 Score: 236.1 bits (601), Expect = 7.9e-59
Identity = 149/317 (47.00%), Postives = 184/317 (58.04%), Query Frame = 1


Query: 2   MVMDVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTRDKLAHREWKHDLLQTVGDDDDNP 61
           M++  M+SKRQRRPNVRLGE+GD+ AA+ACGFS  + + L  + WKHD +    +   N 
Sbjct: 1   MLVLSMNSKRQRRPNVRLGEVGDVPAAFACGFSQKSSENLGLQRWKHDFVNHPEETGHN- 60

Query: 62  IVFGDLEPSTPKLTVSEL----GASPQISTELQQNGDNNNNPNSSALPLEC------PPT 121
           +  G  E  + + TV++     G SP+ S +LQQN +N N PNSS L  E         T
Sbjct: 61  LSLGFSEQKSSEFTVTDPEHDPGVSPRNSADLQQNMENKN-PNSSKLAFETVNSDIVDGT 120

Query: 122 SAGLKFSDVTRKCRNMKRRGRSRNVGYVVLGGSWSSKHSSDDCSMNEKECEG------TR 181
           ++ L F  VTRK R MKRR RS  V   V G +W+SK S    S   KEC G      T 
Sbjct: 121 NSALDFGTVTRKSRVMKRRSRSSRVKSNVFGSAWNSKLSPQFSSEEAKECGGKEIVGFTS 180

Query: 182 NSANGY------GDFSDHQTPTTSKEECGIDQPSTRQDREL--------NNDSQFTGEKG 241
           N+ +GY       DFSD  TP TSKE C  +   T  D            +D+ +     
Sbjct: 181 NACDGYYPENVCKDFSDRGTPATSKEACVYEVEETTYDAWQPGNSNDCWKDDACYEENDA 240

Query: 242 RHKSGIVQDQMRLKDDDTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGV 289
             KSGI  +       D N V RWLEE+GFGKYAG+FEMHEVDEE LPLLT+EDLKE+GV
Sbjct: 241 FIKSGIEWNATGCGGTDVNTVKRWLEELGFGKYAGMFEMHEVDEETLPLLTLEDLKEMGV 300

The following BLAST results are available for this feature:

BLAST of CmoCh10G002980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh10G002980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUR2_CUCSA	8.6e-129	79.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015600 PE=4 SV=1	[more]
A0A061FY61_THECC	7.0e-62	46.84	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_014388 PE=4 SV=1	[more]
A0A067FE27_CITSI	5.5e-59	47.00	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020806mg PE=4 SV=1	[more]
V4T1L0_9ROSI	5.5e-59	47.00	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021188mg PE=4 SV=1	[more]
A0A067K588_JATCU	9.4e-59	47.57	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11767 PE=4 SV=1	[more]

BLAST of CmoCh10G002980 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48800.1	2.0e-15	35.42	Sterile alpha motif (SAM) domain-containing protein	[more]
AT5G23680.1	5.7e-15	40.00	Sterile alpha motif (SAM) domain-containing protein	[more]
AT2G45700.1	1.0e-08	41.94	sterile alpha motif (SAM) domain-containing protein	[more]

BLAST of CmoCh10G002980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441115\|ref\|XP_004138329.1\|	1.2e-128	79.28	PREDICTED: uncharacterized protein LOC101220579 [Cucumis sativus]	[more]
gi\|659106405\|ref\|XP_008453318.1\|	2.3e-127	78.50	PREDICTED: ankyrin repeat and SAM domain-containing protein 6-like [Cucumis melo...	[more]
gi\|1009132208\|ref\|XP_015883260.1\|	4.5e-62	46.98	PREDICTED: uncharacterized protein LOC107419052 [Ziziphus jujuba]	[more]
gi\|590669053\|ref\|XP_007037665.1\|	1.0e-61	46.84	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|641846762\|gb\|KDO65644.1\|	7.9e-59	47.00	hypothetical protein CISIN_1g020806mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001660	SAM
IPR013761	SAM/pointed_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G002980.1	CmoCh10G002980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 229..288 score: 1.9
IPR001660	Sterile alpha motif domain	SMART	SM00454	SAM_4	coord: 224..290 score: 4.1
IPR001660	Sterile alpha motif domain	PROFILE	PS50105	SAM_DOMAIN	coord: 227..290 score: 16
IPR013761	Sterile alpha motif/pointed domain	GENE3D	G3DSA:1.10.150.50		coord: 226..288 score: 2.5
IPR013761	Sterile alpha motif/pointed domain	unknown	SSF47769	SAM/Pointed domain	coord: 229..289 score: 5.5
None	No IPR available	PANTHER	PTHR10627	SCP160	coord: 232..293 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh10G002980	Cucsa.198550	Cucumber (Gy14) v1	cgycmoB0576
CmoCh10G002980	CmaCh10G002800	Cucurbita maxima (Rimu)	cmacmoB067
CmoCh10G002980	CmaCh11G002290	Cucurbita maxima (Rimu)	cmacmoB106
CmoCh10G002980	Cla019033	Watermelon (97103) v1	cmowmB061
CmoCh10G002980	Csa1G015600	Cucumber (Chinese Long) v2	cmocuB040
CmoCh10G002980	MELO3C017254	Melon (DHL92) v3.5.1	cmomeB051
CmoCh10G002980	ClCG06G015410	Watermelon (Charleston Gray)	cmowcgB062
CmoCh10G002980	CSPI01G03250	Wild cucumber (PI 183967)	cmocpiB043
CmoCh10G002980	Lsi06G013870	Bottle gourd (USVL1VR-Ls)	cmolsiB051
CmoCh10G002980	Cp4.1LG18g07190	Cucurbita pepo (Zucchini)	cmocpeB055
CmoCh10G002980	Cp4.1LG04g14410	Cucurbita pepo (Zucchini)	cmocpeB063
CmoCh10G002980	MELO3C017254.2	Melon (DHL92) v3.6.1	cmomedB054
CmoCh10G002980	CsaV3_1G003310	Cucumber (Chinese Long) v3	cmocucB0047
CmoCh10G002980	Cla97C06G124930	Watermelon (97103) v2	cmowmbB067
CmoCh10G002980	Bhi02G000039	Wax gourd	cmowgoB0071
CmoCh10G002980	CsGy1G003230	Cucumber (Gy14) v2	cgybcmoB008
CmoCh10G002980	Carg09183	Silver-seed gourd	carcmoB0805
CmoCh10G002980	Carg17880	Silver-seed gourd	carcmoB0622

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh10G002980	CmoCh11G002320	Cucurbita moschata (Rifu)	cmocmoB045

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh10G002980	Cucurbita maxima (Rimu)	cmacmoB209
CmoCh10G002980	Cucurbita maxima (Rimu)	cmacmoB386
CmoCh10G002980	Cucurbita maxima (Rimu)	cmacmoB447
CmoCh10G002980	Wild cucumber (PI 183967)	cmocpiB060
CmoCh10G002980	Cucumber (Chinese Long) v2	cmocuB059
CmoCh10G002980	Melon (DHL92) v3.5.1	cmomeB042
CmoCh10G002980	Melon (DHL92) v3.5.1	cmomeB073
CmoCh10G002980	Watermelon (Charleston Gray)	cmowcgB056
CmoCh10G002980	Watermelon (97103) v1	cmowmB055
CmoCh10G002980	Cucurbita pepo (Zucchini)	cmocpeB046
CmoCh10G002980	Cucurbita pepo (Zucchini)	cmocpeB047
CmoCh10G002980	Cucurbita pepo (Zucchini)	cmocpeB059
CmoCh10G002980	Bottle gourd (USVL1VR-Ls)	cmolsiB042
CmoCh10G002980	Bottle gourd (USVL1VR-Ls)	cmolsiB069
CmoCh10G002980	Cucumber (Gy14) v2	cgybcmoB024
CmoCh10G002980	Cucumber (Gy14) v2	cgybcmoB443
CmoCh10G002980	Cucumber (Gy14) v2	cgybcmoB555
CmoCh10G002980	Melon (DHL92) v3.6.1	cmomedB041
CmoCh10G002980	Melon (DHL92) v3.6.1	cmomedB046
CmoCh10G002980	Silver-seed gourd	carcmoB0522
CmoCh10G002980	Silver-seed gourd	carcmoB0697
CmoCh10G002980	Cucumber (Chinese Long) v3	cmocucB0063
CmoCh10G002980	Cucumber (Chinese Long) v3	cmocucB0078
CmoCh10G002980	Cucumber (Chinese Long) v3	cmocucB0085
CmoCh10G002980	Watermelon (97103) v2	cmowmbB058
CmoCh10G002980	Wax gourd	cmowgoB0056
CmoCh10G002980	Cucurbita moschata (Rifu)	cmocmoB052
CmoCh10G002980	Cucurbita moschata (Rifu)	cmocmoB063
CmoCh10G002980	Cucurbita moschata (Rifu)	cmocmoB064
CmoCh10G002980	Cucurbita moschata (Rifu)	cmocmoB068
CmoCh10G002980	Cucumber (Gy14) v1	cgycmoB0257
CmoCh10G002980	Cucumber (Gy14) v1	cgycmoB0577