CmoCh09G013190 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G013190
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Retrovirus-related Pol polyprotein from transposon TNT 1-94) (3.1.13.-)
LocationCmo_Chr09 : 11922580 .. 11926086 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGATTTAGGTGCAGCGAAGCAGATCCTTGGGATGAGGATTTCTCGAGATAGATCTGCTGGCACATTAAATCTATCCCAAGAGCAGTACATTGAGAAGGTGTTGTCCAAATTCAAGATGAATAATGCTAAACCCAGGATAGTTGAGGAACGTGAGCACATGGCATCAGTTCCGTACGCTTCTGCAGTTGGGAGTTTGATGTATGCTATGGTCTGCAATAGACCTGACATAACACATGTAGTGGGAGTTGTTAGCAAGTACATGGCAAATCTAGGGAAGGAACATTGGGAAGCTGTGAAGTGGCTTCTGAGATATCTGAGAGCTACATCCAATACTTCACTTTGTTATGACAATGGCAAAGTAGTTCTGTAAGGTTTTGTGAATGCTGATCTGAGTGGAGATGTAGACTCCAGCAAGAGCACATCTGGATATATCTACACTATAGATGGAACAGCAGTGAGTTGGATGTCCAAGCTTCAGAAATGCGTTGCTCTTTCATCTACTGAAGCTGAGTACGTGGCCATAGCTGAAGCTGGAAAGGAGATGATATAGATGACAGACTATCTAGAAGAATTAGGCTGGAAGTAGTGCAAGAAGATCCTTTATACAGATAGTCAGAGTGCCATACAGTTGGTGAAAAACCCAGTCTATCATTCAAGGACAAAACACATTAGAAGATGGTACCATTTCACTTGCAAGTTAGTGGAAGAAGGCGATATGTGTTTGGAGAAGATAGAGGGTGCAAAGAATCCAGCCGACATGTTGACAAAATGTGTTGATGTTGGAAAATTAAGGTTATGCAAAGCCCTAATTGGTATGGTGTAGAATCAGTCTCCAAGTGGGAGAATTGTTAGGTTATGGAGTCTGCTCCGTATATTTATAGCTTGGTCAACGGCTATATCCGATAAAGCTATATTTGGTAAAGCCATATTTGGTAAAGCCATATATGGTAAAGCTATATCCGGTAAATCTATATGGTAAATAGCTATATATAGTAGATGGTTAAATCTGTTAAAGCTATATATAGTAGACTGAACCATATATATAGCCCGTCCAGTAGAGCTTTGAAAATATACTTTCTATTCTCTGTAATTCTCTCTGTACATACGTGAAGTCATCAATACAAAAAAAAAAATCCTTTTAGCCTGAGTTCTCCTTGCAATTTTCTCTATCCTGTTCTTTGTTTTCATCTAGATCGAGCGTGTGCGTTGTTGTGCGATCCTAACAAAATGTAGCTAGGTCTCTTCTTTTTCAGTCACAAGTTCCACTTAATTTTTGGGGAGAGTGCATTTTAACGGCTGTTTATCTTATAAATAGAACGACATCACCATTGTTATCTAACACGACACCCTTTGAAGCACTCTACAAACGACCACCTACATTTCATCATCTTAAAGTTTTTGGTTGTAAATGTTATGCAACTATAGTACATCCTAAGCAAAAATTTGAACCTCGGGCAATTCCTTGTGTTTTCGTAGGATATCCTTGTGGTCATAAAGGTTACAAGTTGTATGACATGCAATCTCACAAATTCTTTATCAGCCGTGATGTTAAATTTTGTGAAGATGATTTTTCTTTTTCATCAGCTTCACAAACTTCGACATTAGCTCCTTCGACTCCTGTTGTACCACTTCTTGATCCATCCTACTCAAACATCCATCCTCCACTTTCTATTCCTTCACCTCCTATCCCTTCATCTACTACTTCGTCGCCTCCTCCACCTTCTTCAGATTCGCCCACTAATTCCAATCCTATCCCACCTGATACATCAGCTCCACTCCGACGTTTTACTCGTACTAAACAGCCTCCAGCTTGGCATAAGGATTTTGAGATGTCTTCTGGAGCCAATCATTTAACCTCTAGCTCAAGTCCCAGCATTGGCACCAGGTATCCCCTTCATCATTACCTTTCATTCTCTCGTTTTTCTCCTACTTAACGTGCTTTTCTAGCTCTTATTACATCCCAGATAGAACCTAAAACCTATGACGAGGCAGTTGGCGACCCGTTATGGCAGCAGGCTATGAATGATGAAATTCCAGCTTTGGAACGTAATCATACATGGTCTCTCGTTCCTCTACCACCTGGTCATAAAGCTATTGGTTGTCGTTGGATGTACAAAATTAAATACAACTCTGATGGTTCTGTTGAACGTTATAAAACTCGACTTGTAGCAAAGGGATACACTCAGGTTGAAGGTATTGATTACATAGAAACATTTTCCCCTACAGCGAAACTTACTACACTTCGTTGCTTACTCACTGTTGCTGCTGCTCGAAAATGGTTCACCCATTAGTTGAATGTTCAAAATGCCTTTCTCCATGGTAACCTAGACGAGGAAGTTTATATGTCTTTACCACCAGGTCTTCGCCGACAGGGGGAGAATATAGTATGTCGGCTCCATAAATCTCTTTATGGATTAAAACAGGCTTCTCGCAATTGGTTCTCCACATTTTCTACAACTATACAAAATGCAGGCTACACTCAGTCCAAAGCAAATTACTCTTTGTTTACTAAGAGTAAAGGTACTTCTTTCACTGCAGTTCTAATCTATGTTGATGATATTTTGTTGACAGGCAATGATCTCAAAGAATTCAATATCTCAAGACTAGTTTACTCTAGAAATTTCTTATCAAAGATTTAGGAAATTTGAAATATTTTCTAGGCATTGAATTTTCTCGGTCTAGAAAAGAAATTTTTATGTCTCAAAGGAAGTATGCTCTAGACATCCTTCAAGACACAGGTCTTACAGGAGCACATCCAGACAAATTTCCTATGGAGCAAAATCTGAAACTTTCTTTAACTGAAGGAGAGAAGTTGAACGATCCAAGTAAATACAGACGGTTGATTAACAGATTAATATATTTGACCGTCACTAGGCCTGCCATAGCTTATTCAGTTCGTATGCTTAGCCAATTTATGCATGAACCAAGAAAACCACATTGGGAGGCAGCTCTTCGAGTTCTGAGGTACATCAAAGGCACTCCTGGTCAAGAACTCCTACTGCCATTTGAAAACAATTTAAGATTACAAGCATATTGCAATTCTGACTGGGGTGGTTGTCGAACTTCTAGATGGTCTATTTCTGGGTTTTGCATTTTCCCCGGAAATTCAATTATTTCTTGGAAGTCTAAAAAGCAGACTAATGTGTCCAGATCATCAGCAGAAGCCGAGTATCGAGCTATGGGAAATACTTGTTTAGAGTTAACTTGGTTAAGATACATTCTTCAAGACTTGAATGTTCCACTGTCCGAATTAGCATTATTATATTGTGATAATCAAGCAGCATTACATATAGCAGCCAATCCAGTTTTTCACGAACGTACGAAACACATTGAAATAGATTGTCATATAGTTCGAGAAAAGTTACAAGCTGGAATCATCAAACCGTGTGATGTTTCGACTAAAATGCAATTGGCAGATGTTTTTACTAAAGCTTTGGTAAGACATCAGTTTGACTTTTTGAAGGACAAGTTGGGTGTGATCGACATACACTCTCCAACTTGA

mRNA sequence

ATGAAAGATTTAGGTGCAGCGAAGCAGATCCTTGGGATGAGGATTTCTCGAGATAGATCTGCTGGCACATTAAATCTATCCCAAGAGCAGTACATTGAGAAGGTGTTGTCCAAATTCAAGATGAATAATGCTAAACCCAGGATAGTTGAGGAACGTGAGCACATGGCATCAGTTCCGTACGCTTCTGCAGTTGGGAGTTTGATGTATGCTATGGTCTGCAATAGACCTGACATAACACATGTAGTGGGAGTTGTTAGCAAGTACATGGCAAATCTAGGGAAGGAACATTGGGAAGCTGTGAAGTGGCTTCTGAGATATCTGAGAGCTACATCCAATACTTCACTTTGTTATGACAATGGCAAAGTAGTTCTCCGTGATGTTAAATTTTGTGAAGATGATTTTTCTTTTTCATCAGCTTCACAAACTTCGACATTAGCTCCTTCGACTCCTGTTGTACCACTTCTTGATCCATCCTACTCAAACATCCATCCTCCACTTTCTATTCCTTCACCTCCTATCCCTTCATCTACTACTTCGTCGCCTCCTCCACCTTCTTCAGATTCGCCCACTAATTCCAATCCTATCCCACCTGATACATCAGCTCCACTCCGACGTTTTACTCGTACTAAACAGCCTCCAGCTTGGCATAAGGATTTTGAGATGTCTTCTGGAGCCAATCATTTAACCTCTAGCTCAAGTCCCAGCATTGGCACCAGAAAAGAAATTTTTATGTCTCAAAGGAAGTATGCTCTAGACATCCTTCAAGACACAGGTCTTACAGGAGCACATCCAGACAAATTTCCTATGGAGCAAAATCTGAAACTTTCTTTAACTGAAGGAGAGAAGTTGAACGATCCAAGTAAATACAGACGGTTGATTAACAGATTAATATATTTGACCGTCACTAGGCCTGCCATAGCTTATTCAGTTCGTATGCTTAGCCAATTTATGCATGAACCAAGAAAACCACATTGGGAGGCAGCTCTTCGAGTTCTGAGGTACATCAAAGGCACTCCTGGTCAAGAACTCCTACTGCCATTTGAAAACAATTTAAGATTACAAGCATATTGCAATTCTGACTGGGGTGGTTGTCGAACTTCTAGATGGTCTATTTCTGGGTTTTGCATTTTCCCCGGAAATTCAATTATTTCTTGGAAGTCTAAAAAGCAGACTAATGTGTCCAGATCATCAGCAGAAGCCGAGTATCGAGCTATGGGAAATACTTGTTTAGAGTTAACTTGGTTAAGATACATTCTTCAAGACTTGAATGTTCCACTGTCCGAATTAGCATTATTATATTGTGATAATCAAGCAGCATTACATATAGCAGCCAATCCAGTTTTTCACGAACGTACGAAACACATTGAAATAGATTGTCATATAGTTCGAGAAAAGTTACAAGCTGGAATCATCAAACCGTGTGATGTTTCGACTAAAATGCAATTGGCAGATGTTTTTACTAAAGCTTTGGTAAGACATCAGTTTGACTTTTTGAAGGACAAGTTGGGTGTGATCGACATACACTCTCCAACTTGA

Coding sequence (CDS)

ATGAAAGATTTAGGTGCAGCGAAGCAGATCCTTGGGATGAGGATTTCTCGAGATAGATCTGCTGGCACATTAAATCTATCCCAAGAGCAGTACATTGAGAAGGTGTTGTCCAAATTCAAGATGAATAATGCTAAACCCAGGATAGTTGAGGAACGTGAGCACATGGCATCAGTTCCGTACGCTTCTGCAGTTGGGAGTTTGATGTATGCTATGGTCTGCAATAGACCTGACATAACACATGTAGTGGGAGTTGTTAGCAAGTACATGGCAAATCTAGGGAAGGAACATTGGGAAGCTGTGAAGTGGCTTCTGAGATATCTGAGAGCTACATCCAATACTTCACTTTGTTATGACAATGGCAAAGTAGTTCTCCGTGATGTTAAATTTTGTGAAGATGATTTTTCTTTTTCATCAGCTTCACAAACTTCGACATTAGCTCCTTCGACTCCTGTTGTACCACTTCTTGATCCATCCTACTCAAACATCCATCCTCCACTTTCTATTCCTTCACCTCCTATCCCTTCATCTACTACTTCGTCGCCTCCTCCACCTTCTTCAGATTCGCCCACTAATTCCAATCCTATCCCACCTGATACATCAGCTCCACTCCGACGTTTTACTCGTACTAAACAGCCTCCAGCTTGGCATAAGGATTTTGAGATGTCTTCTGGAGCCAATCATTTAACCTCTAGCTCAAGTCCCAGCATTGGCACCAGAAAAGAAATTTTTATGTCTCAAAGGAAGTATGCTCTAGACATCCTTCAAGACACAGGTCTTACAGGAGCACATCCAGACAAATTTCCTATGGAGCAAAATCTGAAACTTTCTTTAACTGAAGGAGAGAAGTTGAACGATCCAAGTAAATACAGACGGTTGATTAACAGATTAATATATTTGACCGTCACTAGGCCTGCCATAGCTTATTCAGTTCGTATGCTTAGCCAATTTATGCATGAACCAAGAAAACCACATTGGGAGGCAGCTCTTCGAGTTCTGAGGTACATCAAAGGCACTCCTGGTCAAGAACTCCTACTGCCATTTGAAAACAATTTAAGATTACAAGCATATTGCAATTCTGACTGGGGTGGTTGTCGAACTTCTAGATGGTCTATTTCTGGGTTTTGCATTTTCCCCGGAAATTCAATTATTTCTTGGAAGTCTAAAAAGCAGACTAATGTGTCCAGATCATCAGCAGAAGCCGAGTATCGAGCTATGGGAAATACTTGTTTAGAGTTAACTTGGTTAAGATACATTCTTCAAGACTTGAATGTTCCACTGTCCGAATTAGCATTATTATATTGTGATAATCAAGCAGCATTACATATAGCAGCCAATCCAGTTTTTCACGAACGTACGAAACACATTGAAATAGATTGTCATATAGTTCGAGAAAAGTTACAAGCTGGAATCATCAAACCGTGTGATGTTTCGACTAAAATGCAATTGGCAGATGTTTTTACTAAAGCTTTGGTAAGACATCAGTTTGACTTTTTGAAGGACAAGTTGGGTGTGATCGACATACACTCTCCAACTTGA
Homology
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BLAST of CmoCh09G013190 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 6.9e-39
Identity = 95/274 (34.67%), Postives = 157/274 (57.30%), Query Frame = 1 

Query: 238  TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSL----TEGEKLNDPSK--YRR 297
            T +++++SQ KY   +L+   +  A P   P+  +LKLS     T  E+  + +K  Y  
Sbjct: 1054 TSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSS 1113

Query: 298  LINRLIYLTV-TRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENN 357
             +  L+Y  V TRP IA++V ++S+F+  P K HWEA   +LRY++GT G  L     + 
Sbjct: 1114 AVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDP 1173

Query: 358  LRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCL 417
            + L+ Y ++D  G   +R S +G+        ISW+SK Q  V+ S+ EAEY A   T  
Sbjct: 1174 I-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGK 1233

Query: 418  ELTWLRYILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGI 477
            E+ WL+  LQ+L +   E  ++YCD+Q+A+ ++ N ++H RTKHI++  H +RE +    
Sbjct: 1234 EMIWLKRFLQELGLHQKEY-VVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDES 1293

Query: 478  IKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGV 505
            +K   +ST    AD+ TK + R++F+  K+ +G+
Sbjct: 1294 LKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]
BLAST of CmoCh09G013190 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 162.2 bits (409), Expect = 1.5e-38
Identity = 99/273 (36.26%), Postives = 149/273 (54.58%), Query Frame = 1 

Query: 241  EIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEG-EKLNDPSKYRRLINRLIYL 300
            +I++SQ  Y   IL    +   +    P+   +   L    E  N P   R LI  L+Y+
Sbjct: 1134 KIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPC--RSLIGCLMYI 1193

Query: 301  TV-TRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELL----LPFENNLRLQ 360
             + TRP +  +V +LS++  +     W+   RVLRY+KGT   +L+    L FEN  ++ 
Sbjct: 1194 MLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFEN--KII 1253

Query: 361  AYCNSDWGGCRTSRWSISG--FCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLEL 420
             Y +SDW G    R S +G  F +F  N +I W +K+Q +V+ SS EAEY A+     E 
Sbjct: 1254 GYVDSDWAGSEIDRKSTTGYLFKMFDFN-LICWNTKRQNSVAASSTEAEYMALFEAVREA 1313

Query: 421  TWLRYILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIK 480
             WL+++L  +N+ L     +Y DNQ  + IA NP  H+R KHI+I  H  RE++Q  +I 
Sbjct: 1314 LWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVIC 1373

Query: 481  PCDVSTKMQLADVFTKALVRHQFDFLKDKLGVI 506
               + T+ QLAD+FTK L   +F  L+DKLG++
Sbjct: 1374 LEYIPTENQLADIFTKPLPAARFVELRDKLGLL 1401

[Close]
BLAST of CmoCh09G013190 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.7e-37
Identity = 79/173 (45.66%), Postives = 109/173 (63.01%), Query Frame = 1 

Query: 242 IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTV 301
           +F+SQ KYA  IL + G+    P   P+   L  S++   K  DPS +R ++  L YLT+
Sbjct: 54  LFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA-KYPDPSDFRSIVGALQYLTL 113

Query: 302 TRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYCNSDW 361
           TRP I+Y+V ++ Q MHEP    ++   RVLRY+KGT    L +   + L +QA+C+SDW
Sbjct: 114 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 173

Query: 362 GGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTW 415
            GC ++R S +GFC F G +IISW +K+Q  VSRSS E EYRA+  T  ELTW
Sbjct: 174 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of CmoCh09G013190 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 2.3e-13
Identity = 51/174 (29.31%), Postives = 82/174 (47.13%), Query Frame = 1 

Query: 241 EIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLT 300
           +I +S + Y      ++ +      + P+  +  L  T    L D + Y+ ++ +L++  
Sbjct: 135 DITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDITPYQSIVGQLLFCA 194

Query: 301 VT-RPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYCNS 360
            T RP I+Y V +LS+F+ EPR  H E+A RVLRY+  T    L     + L L  YC++
Sbjct: 195 NTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVYCDA 254

Query: 361 DWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNV-SRSSAEAEYRAMGNTCLEL 413
             G       S  G+      + ++W SKK   V    S EAEY     T +E+
Sbjct: 255 SHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASETVMEI 308

[Close]
BLAST of CmoCh09G013190 vs. Swiss-Prot
Match: M240_ARATH (Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana GN=AtMg00240 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.9e-13
Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 1 

Query: 297 IYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAY 356
           +YLT+TRP + ++V  LSQF    R    +A  +VL Y+KGT GQ L     ++L+L+A+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 357 CNSDWGGCRTSRWSISGFC 376
            +SDW  C  +R S++GFC
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

[Close]
BLAST of CmoCh09G013190 vs. TrEMBL
Match: A5BNR5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035665 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 3.6e-119
Identity = 211/266 (79.32%), Postives = 235/266 (88.35%), Query Frame = 1 

Query: 238  TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLI 297
            ++K IFMSQRKY LDILQDTGLTG  P+KFPMEQNLKL+  +GE L+DPS+YRRL+ RLI
Sbjct: 1456 SKKGIFMSQRKYTLDILQDTGLTGVKPEKFPMEQNLKLTNEDGELLHDPSRYRRLVGRLI 1515

Query: 298  YLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYC 357
            YLTVTRP I YSVR LSQFM+ PRKPHWEAALRVLRYIKG+PGQ L LP ENNL L A+C
Sbjct: 1516 YLTVTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFC 1575

Query: 358  NSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRY 417
            +SDWGGCR SR S+SG+C+F G+S+ISWKSKKQTNVSRSSAEAEYRAM NTCLELTWLRY
Sbjct: 1576 DSDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRY 1635

Query: 418  ILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVS 477
            IL+DL V L + A L+CDNQAAL+IAANPVFHERTKHIEIDCHIVREKLQAG+I+PC VS
Sbjct: 1636 ILKDLKVELDKPAPLFCDNQAALYIAANPVFHERTKHIEIDCHIVREKLQAGVIRPCYVS 1695

Query: 478  TKMQLADVFTKALVRHQFDFLKDKLG 504
            TKMQLADVFTKAL R QF+FL  KLG
Sbjct: 1696 TKMQLADVFTKALGREQFEFLCTKLG 1721

[Close]
BLAST of CmoCh09G013190 vs. TrEMBL
Match: A5BLV0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033389 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 3.8e-92
Identity = 167/274 (60.95%), Postives = 210/274 (76.64%), Query Frame = 1 

Query: 238  TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLI 297
            ++K I +SQRKY L+IL+D G  GA P  FPMEQN KLS   GE L DPS+YRRL+ RLI
Sbjct: 1007 SKKGISISQRKYTLEILKDGGFLGAKPVNFPMEQNTKLS-DSGELLKDPSQYRRLVGRLI 1066

Query: 298  YLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYC 357
            YLT+TRP I YSV +LS+FMH PR+PH EAALRVLRY+K +PGQ L  P +N+L L+A+ 
Sbjct: 1067 YLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAFS 1126

Query: 358  NSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRY 417
            +SDW GC  SR S +G+C+F G+S+ISW++K+Q  VS SSAEAEYRAM  TC EL+WLR 
Sbjct: 1127 DSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMAGTCCELSWLRS 1186

Query: 418  ILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVS 477
            +L+DL +   + ALLYCDN AALHIAANPVFHERT+HIE+DCH +R+K+Q G +    ++
Sbjct: 1187 LLKDLRILHPKPALLYCDNTAALHIAANPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIA 1246

Query: 478  TKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT 512
            +  QLADVFTK L +  F  +  KLGV+DIHSPT
Sbjct: 1247 STBQLADVFTKPLGKETFSTMIHKLGVLDIHSPT 1279

[Close]
BLAST of CmoCh09G013190 vs. TrEMBL
Match: A5AIJ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031733 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.2e-91
Identity = 166/274 (60.58%), Postives = 208/274 (75.91%), Query Frame = 1 

Query: 238  TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLI 297
            ++K I +SQRKY L+IL+D G  GA P  FPMEQN+KLS    E L DPS+YRRL+ RLI
Sbjct: 1050 SKKGISISQRKYTLEILKDGGFLGAKPVNFPMEQNIKLS-DSSELLKDPSQYRRLVGRLI 1109

Query: 298  YLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYC 357
            YLT+TRP I YSV +LS+FMH PR+PH EAALRVLRY+K +PGQ L  P +N+L L+A+ 
Sbjct: 1110 YLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAFS 1169

Query: 358  NSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRY 417
            +SDW GC  SR S +G+C+F G+S+ISW++K+Q  VS SSAEAEYRAM  TC EL+WLR 
Sbjct: 1170 DSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMTGTCCELSWLRS 1229

Query: 418  ILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVS 477
            +L+DL +   + ALLYCDN  ALHIAANPVFHERT+HIE+DCH +REK+Q G      ++
Sbjct: 1230 LLKDLRILHPKPALLYCDNTTALHIAANPVFHERTRHIEMDCHFIREKIQDGSFVTKHIA 1289

Query: 478  TKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT 512
            +  QLADVFTK L +  F  +  KLGV+DIHSPT
Sbjct: 1290 STNQLADVFTKPLGKETFSTMIHKLGVLDIHSPT 1322

[Close]
BLAST of CmoCh09G013190 vs. TrEMBL
Match: A0A0B2QQ23_GLYSO (Copia protein (Fragment) OS=Glycine soja GN=glysoja_029824 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 7.1e-91
Identity = 166/220 (75.45%), Postives = 185/220 (84.09%), Query Frame = 1 

Query: 291 RLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENN 350
           RL+ RLIYLTVTRP I YSV+ LSQFMHEPRKPHW+AALRVLRYIKGTPGQ LL    N+
Sbjct: 1   RLVGRLIYLTVTRPDIVYSVQTLSQFMHEPRKPHWDAALRVLRYIKGTPGQGLLFSSAND 60

Query: 351 LRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCL 410
           L L+A+C+SDWGGC  +R S++GFC F GNS+ISWKSKKQ  VSRSSAE+EYRAM NTCL
Sbjct: 61  LTLKAFCDSDWGGCHATRKSVTGFCFFLGNSLISWKSKKQVVVSRSSAESEYRAMANTCL 120

Query: 411 ELTWLRYILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGI 470
           ELTWLR+ILQDL VP      L+CDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAG+
Sbjct: 121 ELTWLRFILQDLKVPQDAPTPLFCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGM 180

Query: 471 IKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSP 511
           I P  V TK QLADVFTKAL + QF  L++KLG+ DIHSP
Sbjct: 181 INPSYVPTKFQLADVFTKALGKDQFVTLRNKLGLHDIHSP 220

[Close]
BLAST of CmoCh09G013190 vs. TrEMBL
Match: A0A151T590_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_016743 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 7.1e-91
Identity = 163/274 (59.49%), Postives = 209/274 (76.28%), Query Frame = 1 

Query: 238 TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLI 297
           ++K IF+SQRKY L+I++D G  GA P  FPMEQN+KLS  EGE L DPS YRR + RLI
Sbjct: 56  SKKGIFISQRKYTLEIVKDGGYLGAKPMDFPMEQNIKLS-DEGELLKDPSIYRRFVGRLI 115

Query: 298 YLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYC 357
            LT+TRP I Y+V +LS+FMH P K H +AA+ VLRY+K  PGQ L  P +N+L L+A+C
Sbjct: 116 NLTITRPDITYAVHVLSRFMHAPCKSHLKAAMHVLRYLKNNPGQGLFFPSQNDLSLRAFC 175

Query: 358 NSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRY 417
           +SDWGGC  SR S +G+C+F G+S+ISW++K+Q  +S SSAEAEYRA+  TC ELTWLR 
Sbjct: 176 DSDWGGCPVSRKSTTGYCVFLGSSLISWRTKRQKTISLSSAEAEYRALAGTCCELTWLRS 235

Query: 418 ILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVS 477
           +L+DL +   + ALLYCDN+AALHIAANPVFHE+T+HIE+DCH +R+K+Q G +    V 
Sbjct: 236 LLKDLRILHPKPALLYCDNKAALHIAANPVFHEKTRHIEMDCHFIRDKIQDGSVTTKYVP 295

Query: 478 TKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT 512
           +  QLADVFTK L +  F  +K KLGV+DIHSPT
Sbjct: 296 SAEQLADVFTKPLGKEAFSIMKRKLGVLDIHSPT 328

[Close]
BLAST of CmoCh09G013190 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 230.7 bits (587), Expect = 2.0e-60
Identity = 112/224 (50.00%), Postives = 150/224 (66.96%), Query Frame = 1 

Query: 242 IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTV 301
           I + QRKYALD+L +TGL G  P   PM+ ++  S   G    D   YRRLI RL+YL +
Sbjct: 331 INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQI 390

Query: 302 TRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYCNSDW 361
           TR  I+++V  LSQF   PR  H +A +++L YIKGT GQ L    +  ++LQ + ++ +
Sbjct: 391 TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASF 450

Query: 362 GGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQD 421
             C+ +R S +G+C+F G S+ISWKSKKQ  VS+SSAEAEYRA+     E+ WL    ++
Sbjct: 451 QSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRE 510

Query: 422 LNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREK 466
           L +PLS+  LL+CDN AA+HIA N VFHERTKHIE DCH VRE+
Sbjct: 511 LQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554

[Close]
BLAST of CmoCh09G013190 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 158.7 bits (400), Expect = 9.6e-39
Identity = 79/173 (45.66%), Postives = 109/173 (63.01%), Query Frame = 1 

Query: 242 IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTV 301
           +F+SQ KYA  IL + G+    P   P+   L  S++   K  DPS +R ++  L YLT+
Sbjct: 54  LFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA-KYPDPSDFRSIVGALQYLTL 113

Query: 302 TRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYCNSDW 361
           TRP I+Y+V ++ Q MHEP    ++   RVLRY+KGT    L +   + L +QA+C+SDW
Sbjct: 114 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 173

Query: 362 GGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTW 415
            GC ++R S +GFC F G +IISW +K+Q  VSRSS E EYRA+  T  ELTW
Sbjct: 174 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of CmoCh09G013190 vs. TAIR10
Match: ATMG00240.1 (ATMG00240.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 78.2 bits (191), Expect = 1.7e-14
Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 1 

Query: 297 IYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAY 356
           +YLT+TRP + ++V  LSQF    R    +A  +VL Y+KGT GQ L     ++L+L+A+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 357 CNSDWGGCRTSRWSISGFC 376
            +SDW  C  +R S++GFC
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

[Close]
BLAST of CmoCh09G013190 vs. NCBI nr
Match: gi|147783627|emb|CAN68148.1| (hypothetical protein VITISV_035665 [Vitis vinifera])

HSP 1 Score: 436.8 bits (1122), Expect = 5.2e-119
Identity = 211/266 (79.32%), Postives = 235/266 (88.35%), Query Frame = 1 

Query: 238  TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLI 297
            ++K IFMSQRKY LDILQDTGLTG  P+KFPMEQNLKL+  +GE L+DPS+YRRL+ RLI
Sbjct: 1456 SKKGIFMSQRKYTLDILQDTGLTGVKPEKFPMEQNLKLTNEDGELLHDPSRYRRLVGRLI 1515

Query: 298  YLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYC 357
            YLTVTRP I YSVR LSQFM+ PRKPHWEAALRVLRYIKG+PGQ L LP ENNL L A+C
Sbjct: 1516 YLTVTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFC 1575

Query: 358  NSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRY 417
            +SDWGGCR SR S+SG+C+F G+S+ISWKSKKQTNVSRSSAEAEYRAM NTCLELTWLRY
Sbjct: 1576 DSDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRY 1635

Query: 418  ILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVS 477
            IL+DL V L + A L+CDNQAAL+IAANPVFHERTKHIEIDCHIVREKLQAG+I+PC VS
Sbjct: 1636 ILKDLKVELDKPAPLFCDNQAALYIAANPVFHERTKHIEIDCHIVREKLQAGVIRPCYVS 1695

Query: 478  TKMQLADVFTKALVRHQFDFLKDKLG 504
            TKMQLADVFTKAL R QF+FL  KLG
Sbjct: 1696 TKMQLADVFTKALGREQFEFLCTKLG 1721

[Close]
BLAST of CmoCh09G013190 vs. NCBI nr
Match: gi|971549811|ref|XP_015164069.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum tuberosum])

HSP 1 Score: 407.9 bits (1047), Expect = 2.6e-110
Identity = 196/268 (73.13%), Postives = 225/268 (83.96%), Query Frame = 1 

Query: 244 MSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTR 303
           MSQRKYA+DILQD+G+ GA P+ FPMEQNLKL+ T+G  LNDP+KYRRL+ RLIYLTVTR
Sbjct: 1   MSQRKYAIDILQDSGILGARPELFPMEQNLKLTSTDGVVLNDPTKYRRLVGRLIYLTVTR 60

Query: 304 PAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYCNSDWGG 363
           P I YSVR LSQFM EPRKPHW+AA+R+L+YIKGTPGQ LL P  NNL L+A+C+SDWG 
Sbjct: 61  PDIVYSVRTLSQFMQEPRKPHWDAAVRILKYIKGTPGQGLLFPSTNNLILKAFCDSDWGS 120

Query: 364 CRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLN 423
           CR +R S++G+CIF GNS+ISWKSKKQ  VSRSSAEAEYRAM NTCLELTWL YILQDL 
Sbjct: 121 CRATRRSVTGYCIFLGNSLISWKSKKQLVVSRSSAEAEYRAMANTCLELTWLSYILQDLR 180

Query: 424 VPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLA 483
           +     A L+CDNQAALHIAANPVFHERTKHI++DCHIVREKLQA +I P  V T  QLA
Sbjct: 181 ISNVTPAKLFCDNQAALHIAANPVFHERTKHIDLDCHIVREKLQAKLISPSYVPTHFQLA 240

Query: 484 DVFTKALVRHQFDFLKDKLGVIDIHSPT 512
           D+FTKAL + QF  L++KLGV DIHSPT
Sbjct: 241 DIFTKALGKDQFVTLRNKLGVHDIHSPT 268

[Close]
BLAST of CmoCh09G013190 vs. NCBI nr
Match: gi|147816002|emb|CAN65808.1| (hypothetical protein VITISV_033389 [Vitis vinifera])

HSP 1 Score: 347.1 bits (889), Expect = 5.4e-92
Identity = 167/274 (60.95%), Postives = 210/274 (76.64%), Query Frame = 1 

Query: 238  TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLI 297
            ++K I +SQRKY L+IL+D G  GA P  FPMEQN KLS   GE L DPS+YRRL+ RLI
Sbjct: 1007 SKKGISISQRKYTLEILKDGGFLGAKPVNFPMEQNTKLS-DSGELLKDPSQYRRLVGRLI 1066

Query: 298  YLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYC 357
            YLT+TRP I YSV +LS+FMH PR+PH EAALRVLRY+K +PGQ L  P +N+L L+A+ 
Sbjct: 1067 YLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAFS 1126

Query: 358  NSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRY 417
            +SDW GC  SR S +G+C+F G+S+ISW++K+Q  VS SSAEAEYRAM  TC EL+WLR 
Sbjct: 1127 DSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMAGTCCELSWLRS 1186

Query: 418  ILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVS 477
            +L+DL +   + ALLYCDN AALHIAANPVFHERT+HIE+DCH +R+K+Q G +    ++
Sbjct: 1187 LLKDLRILHPKPALLYCDNTAALHIAANPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIA 1246

Query: 478  TKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT 512
            +  QLADVFTK L +  F  +  KLGV+DIHSPT
Sbjct: 1247 STBQLADVFTKPLGKETFSTMIHKLGVLDIHSPT 1279

[Close]
BLAST of CmoCh09G013190 vs. NCBI nr
Match: gi|694351566|ref|XP_009357571.1| (PREDICTED: uncharacterized protein LOC103948287 [Pyrus x bretschneideri])

HSP 1 Score: 344.0 bits (881), Expect = 4.6e-91
Identity = 161/268 (60.07%), Postives = 212/268 (79.10%), Query Frame = 1 

Query: 242 IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTV 301
           I +SQRKYAL+IL+DTG  GA P +FP++QN+ L+  +G  L D S+YRRL+ RLIYLT+
Sbjct: 678 IALSQRKYALEILEDTGFLGAKPSRFPVDQNITLTQGDGRLLADASQYRRLVGRLIYLTI 737

Query: 302 TRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYCNSDW 361
           TRP + Y+V +LSQFM +PR+PH +AA +VLRY+K TPGQ + LP + +L L+AYC++DW
Sbjct: 738 TRPDLVYAVHILSQFMDKPRQPHLDAAHKVLRYLKQTPGQGIFLPSKGSLELRAYCDADW 797

Query: 362 GGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQD 421
             C+ +R SI+G+CIF G++ ISWK+KKQ+ VSRSSAEAEYR+M   C E+TWL+YIL+D
Sbjct: 798 ARCKDNRRSITGYCIFLGHAPISWKTKKQSTVSRSSAEAEYRSMATACCEITWLQYILKD 857

Query: 422 LNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQ 481
           LN+   +   L+CDN+AA+HIA+NPVFHERTKHIEIDCHIVREK+Q  +I+   + TK Q
Sbjct: 858 LNIQHLQPVKLFCDNKAAIHIASNPVFHERTKHIEIDCHIVREKVQKRLIQTEHIRTKEQ 917

Query: 482 LADVFTKALVRHQFDFLKDKLGVIDIHS 510
            AD+FTK L  +QF  L DKLGVI+IHS
Sbjct: 918 PADIFTKPLSSNQFSTLLDKLGVINIHS 945

[Close]
BLAST of CmoCh09G013190 vs. NCBI nr
Match: gi|147773401|emb|CAN73437.1| (hypothetical protein VITISV_031733 [Vitis vinifera])

HSP 1 Score: 344.0 bits (881), Expect = 4.6e-91
Identity = 166/274 (60.58%), Postives = 208/274 (75.91%), Query Frame = 1 

Query: 238  TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLI 297
            ++K I +SQRKY L+IL+D G  GA P  FPMEQN+KLS    E L DPS+YRRL+ RLI
Sbjct: 1050 SKKGISISQRKYTLEILKDGGFLGAKPVNFPMEQNIKLS-DSSELLKDPSQYRRLVGRLI 1109

Query: 298  YLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYC 357
            YLT+TRP I YSV +LS+FMH PR+PH EAALRVLRY+K +PGQ L  P +N+L L+A+ 
Sbjct: 1110 YLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAFS 1169

Query: 358  NSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRY 417
            +SDW GC  SR S +G+C+F G+S+ISW++K+Q  VS SSAEAEYRAM  TC EL+WLR 
Sbjct: 1170 DSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMTGTCCELSWLRS 1229

Query: 418  ILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVS 477
            +L+DL +   + ALLYCDN  ALHIAANPVFHERT+HIE+DCH +REK+Q G      ++
Sbjct: 1230 LLKDLRILHPKPALLYCDNTTALHIAANPVFHERTRHIEMDCHFIREKIQDGSFVTKHIA 1289

Query: 478  TKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT 512
            +  QLADVFTK L +  F  +  KLGV+DIHSPT
Sbjct: 1290 STNQLADVFTKPLGKETFSTMIHKLGVLDIHSPT 1322

The following BLAST results are available for this feature:
BLAST of CmoCh09G013190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
POLX_TOBAC6.9e-3934.67Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
COPIA_DROME1.5e-3836.26Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
M810_ARATH1.7e-3745.66Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0... [more]
YCH4_YEAST2.3e-1329.31Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
M240_ARATH2.9e-1343.04Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana GN=AtMg0... [more]
BLAST of CmoCh09G013190 vs. TrEMBL
Match NameE-valueIdentityDescription
A5BNR5_VITVI3.6e-11979.32Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035665 PE=4 SV=1[more]
A5BLV0_VITVI3.8e-9260.95Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033389 PE=4 SV=1[more]
A5AIJ8_VITVI3.2e-9160.58Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031733 PE=4 SV=1[more]
A0A0B2QQ23_GLYSO7.1e-9175.45Copia protein (Fragment) OS=Glycine soja GN=glysoja_029824 PE=4 SV=1[more]
A0A151T590_CAJCA7.1e-9159.49Uncharacterized protein OS=Cajanus cajan GN=KK1_016743 PE=4 SV=1[more]
BLAST of CmoCh09G013190 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23160.12.0e-6050.00 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00810.19.6e-3945.66ATMG00810.1 DNA/RNA polymerases superfamily protein[more]
ATMG00240.11.7e-1443.04ATMG00240.1 Gag-Pol-related retrotransposon family protein[more]
BLAST of CmoCh09G013190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|147783627|emb|CAN68148.1|5.2e-11979.32hypothetical protein VITISV_035665 [Vitis vinifera][more]
gi|971549811|ref|XP_015164069.1|2.6e-11073.13PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum tuberos... [more]
gi|147816002|emb|CAN65808.1|5.4e-9260.95hypothetical protein VITISV_033389 [Vitis vinifera][more]
gi|694351566|ref|XP_009357571.1|4.6e-9160.07PREDICTED: uncharacterized protein LOC103948287 [Pyrus x bretschneideri][more]
gi|147773401|emb|CAN73437.1|4.6e-9160.58hypothetical protein VITISV_031733 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G013190.1CmoCh09G013190.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..47
score: 1.
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 238..429
score: 4.9
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 238..429
score: 4.9
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 280..460
score: 3.25

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh09G013190Cucumber (Chinese Long) v2cmocuB020
CmoCh09G013190Melon (DHL92) v3.5.1cmomeB000
CmoCh09G013190Watermelon (Charleston Gray)cmowcgB027
CmoCh09G013190Watermelon (97103) v1cmowmB011
CmoCh09G013190Cucurbita pepo (Zucchini)cmocpeB025
CmoCh09G013190Cucurbita pepo (Zucchini)cmocpeB035
CmoCh09G013190Bottle gourd (USVL1VR-Ls)cmolsiB025
CmoCh09G013190Cucumber (Gy14) v2cgybcmoB551
CmoCh09G013190Melon (DHL92) v3.6.1cmomedB000
CmoCh09G013190Silver-seed gourdcarcmoB0064
CmoCh09G013190Cucumber (Chinese Long) v3cmocucB0024
CmoCh09G013190Watermelon (97103) v2cmowmbB028
CmoCh09G013190Wax gourdcmowgoB0001
CmoCh09G013190Cucurbita moschata (Rifu)cmocmoB021
CmoCh09G013190Cucumber (Gy14) v1cgycmoB0082
CmoCh09G013190Cucurbita maxima (Rimu)cmacmoB029
CmoCh09G013190Cucurbita maxima (Rimu)cmacmoB438
CmoCh09G013190Wild cucumber (PI 183967)cmocpiB020