CmoCh09G012390 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh09G012390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Retrotransposon protein, putative, Ty3-gypsy subclass
Location	Cmo_Chr09 : 10638698 .. 10640050 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACTAGCGAAATGCTTGGTGATCATTGAACGCAATTCCACAGTAATACCTGCAAGCATCAAACAGCCAGGTAATCTTAGAATGATTTCGGCCATACAATTGAAAAGAGGGCTCGCACGAGAGGAACCTACATTTATGACTATACCACTGATGGAAGAAGTGACTACTGAGGAAACTATCCCAGACGAAATCAAGGAGGTATTAAACAGTTACGCTGATATAATGTCAGAGAGCCTACCACAAACATTACCACCCCGTCGAGGCATTGATCACGAAATTGAACTCCTTCCCGAGGTTAAACCCCCAGCGAAGAATGCATACTGGATGGCTCCCCTTGAGCTAGCCGAATTGAGGAAACAACTAGATGAGTTGTTGACGGCAGGATTCATTTGCCCGGCAAAAGCACCTTACGGAGCCCCCGTACTATTTCAGAAAAAGAAGGATGGGACGTTGCGCCTGTGCATAGATTATAGAGCCTTAAACAAGGTGACGGTACACAACAAGTACCCACTGCTGATAATATCTGACTTGTTCGACCAACTTCATGGGGCCAAATACTTCACGAAGTTGGACATACGATCAGGGTACTACCAAGTACGTATCGCCGAGGGGGACGAGTCCAAGACGACGTTCATGACAAGATATGGGGCCTTCGAGTTCCTGGTGATGCCCTTTGGCTTGACAAACGCCCCAGCTACGTTTTACATGTTAATGAACCTGGTTTTCTACGAATACTTGGATCAGTTTGTCATAGTATCCCTCGATGACATAGTTGTATACAGCACAACCTTAGAGGAACACAAGGTACACTTGAAGCTTGTATTTGACAAGCTGCGGCAGAATCAGTTGTACGTCAAGAAAGAAAAATGTGCCTTCGCACAGACATGCATCAACTTCCTCGAACATGTCATCAGTTGTGGACAGATTGGGATGGATAGCGATAAGATAAAAGCTATCCAAGAGTGGAAAGTCCCTACTTCCGTATCCGATGTGCGATCCTTCTTAGGATTAGCAAACTACTATAGGCGGTTCGTCGAAGGGTTTTCACGACGAGCCACCCCCTTAACGGAGCTCCTGAAGAAAGACCACCCTTGGTCGTGGTCAAATAAATGTCAAATGGCCTTTGAAGATCTGAAGACAACCATGACGAGGGGTCCTGCCTTCGAGTTAGTAGATGTTACAAAGTCATTTGAAATAGAAACAAATGCTTCTGACTTTGCCCTAGGCGATGTCCTTATTCAAGAAGGGCGCCCCATCGCTTATGAAAGTCGAAAGCTCAATGATGCCGAACGGAGATACACTGTCTCCGAAAAGGAAATGCTAGCTTTAGTTCATTGCCTACGAGTCTAG

mRNA sequence

ATGCCACTAGCGAAATGCTTGGTGATCATTGAACGCAATTCCACAGTAATACCTGCAAGCATCAAACAGCCAGGTAATCTTAGAATGATTTCGGCCATACAATTGAAAAGAGGGCTCGCACGAGAGGAACCTACATTTATGACTATACCACTGATGGAAGAAGTGACTACTGAGGAAACTATCCCAGACGAAATCAAGGAGGTATTAAACAGTTACGCTGATATAATGTCAGAGAGCCTACCACAAACATTACCACCCCGTCGAGGCATTGATCACGAAATTGAACTCCTTCCCGAGGTTAAACCCCCAGCGAAGAATGCATACTGGATGGCTCCCCTTGAGCTAGCCGAATTGAGGAAACAACTAGATGAGTTGTTGACGGCAGGATTCATTTGCCCGGCAAAAGCACCTTACGGAGCCCCCGTACTATTTCAGAAAAAGAAGGATGGGACGTTGCGCCTGTGCATAGATTATAGAGCCTTAAACAAGGTGACGGTACACAACAAGTACCCACTGCTGATAATATCTGACTTGTTCGACCAACTTCATGGGGCCAAATACTTCACGAAGTTGGACATACGATCAGGGTACTACCAAGTACGTATCGCCGAGGGGGACGAGTCCAAGACGACGTTCATGACAAGATATGGGGCCTTCGAGTTCCTGGTGATGCCCTTTGGCTTGACAAACGCCCCAGCTACGTTTTACATGTTAATGAACCTGGTTTTCTACGAATACTTGGATCAGTTTGTCATAGTATCCCTCGATGACATAGTTGTATACAGCACAACCTTAGAGGAACACAAGGTACACTTGAAGCTTGTATTTGACAAGCTGCGGCAGAATCAGTTGTACGTCAAGAAAGAAAAATGTGCCTTCGCACAGACATGCATCAACTTCCTCGAACATGTCATCAGTTGTGGACAGATTGGGATGGATAGCGATAAGATAAAAGCTATCCAAGAGTGGAAAGTCCCTACTTCCGTATCCGATGTGCGATCCTTCTTAGGATTAGCAAACTACTATAGGCGGTTCGTCGAAGGGTTTTCACGACGAGCCACCCCCTTAACGGAGCTCCTGAAGAAAGACCACCCTTGGTCGTGGTCAAATAAATGTCAAATGGCCTTTGAAGATCTGAAGACAACCATGACGAGGGGTCCTGCCTTCGAGTTAGTAGATGTTACAAAGTCATTTGAAATAGAAACAAATGCTTCTGACTTTGCCCTAGGCGATGTCCTTATTCAAGAAGGGCGCCCCATCGCTTATGAAAGTCGAAAGCTCAATGATGCCGAACGGAGATACACTGTCTCCGAAAAGGAAATGCTAGCTTTAGTTCATTGCCTACGAGTCTAG

Coding sequence (CDS)

ATGCCACTAGCGAAATGCTTGGTGATCATTGAACGCAATTCCACAGTAATACCTGCAAGCATCAAACAGCCAGGTAATCTTAGAATGATTTCGGCCATACAATTGAAAAGAGGGCTCGCACGAGAGGAACCTACATTTATGACTATACCACTGATGGAAGAAGTGACTACTGAGGAAACTATCCCAGACGAAATCAAGGAGGTATTAAACAGTTACGCTGATATAATGTCAGAGAGCCTACCACAAACATTACCACCCCGTCGAGGCATTGATCACGAAATTGAACTCCTTCCCGAGGTTAAACCCCCAGCGAAGAATGCATACTGGATGGCTCCCCTTGAGCTAGCCGAATTGAGGAAACAACTAGATGAGTTGTTGACGGCAGGATTCATTTGCCCGGCAAAAGCACCTTACGGAGCCCCCGTACTATTTCAGAAAAAGAAGGATGGGACGTTGCGCCTGTGCATAGATTATAGAGCCTTAAACAAGGTGACGGTACACAACAAGTACCCACTGCTGATAATATCTGACTTGTTCGACCAACTTCATGGGGCCAAATACTTCACGAAGTTGGACATACGATCAGGGTACTACCAAGTACGTATCGCCGAGGGGGACGAGTCCAAGACGACGTTCATGACAAGATATGGGGCCTTCGAGTTCCTGGTGATGCCCTTTGGCTTGACAAACGCCCCAGCTACGTTTTACATGTTAATGAACCTGGTTTTCTACGAATACTTGGATCAGTTTGTCATAGTATCCCTCGATGACATAGTTGTATACAGCACAACCTTAGAGGAACACAAGGTACACTTGAAGCTTGTATTTGACAAGCTGCGGCAGAATCAGTTGTACGTCAAGAAAGAAAAATGTGCCTTCGCACAGACATGCATCAACTTCCTCGAACATGTCATCAGTTGTGGACAGATTGGGATGGATAGCGATAAGATAAAAGCTATCCAAGAGTGGAAAGTCCCTACTTCCGTATCCGATGTGCGATCCTTCTTAGGATTAGCAAACTACTATAGGCGGTTCGTCGAAGGGTTTTCACGACGAGCCACCCCCTTAACGGAGCTCCTGAAGAAAGACCACCCTTGGTCGTGGTCAAATAAATGTCAAATGGCCTTTGAAGATCTGAAGACAACCATGACGAGGGGTCCTGCCTTCGAGTTAGTAGATGTTACAAAGTCATTTGAAATAGAAACAAATGCTTCTGACTTTGCCCTAGGCGATGTCCTTATTCAAGAAGGGCGCCCCATCGCTTATGAAAGTCGAAAGCTCAATGATGCCGAACGGAGATACACTGTCTCCGAAAAGGAAATGCTAGCTTTAGTTCATTGCCTACGAGTCTAG

Homology

[Close]

BLAST of CmoCh09G012390 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.9e-69
Identity = 145/417 (34.77%), Postives = 235/417 (56.35%), Query Frame = 1


Query: 39  LAREEPTFMTIPLMEEVTTEETIPDEIKEVLNSYADIMSESLPQTLPPRRGIDHEIELLP 98
           ++  + T   +  +  +  E  +PD  KE  +  A+  +E LP+   P +G++ E+EL  
Sbjct: 352 ISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPK---PIKGLEFEVELTQ 411

Query: 99  E-VKPPAKNAYWMAPLELAELRKQLDELLTAGFICPAKAPYGAPVLFQKKKDGTLRLCID 158
           E  + P +N Y + P ++  +  ++++ L +G I  +KA    PV+F  KK+GTLR+ +D
Sbjct: 412 ENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVD 471

Query: 159 YRALNKVTVHNKYPLLIISDLFDQLHGAKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYG 218
           Y+ LNK    N YPL +I  L  ++ G+  FTKLD++S Y+ +R+ +GDE K  F    G
Sbjct: 472 YKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRG 531

Query: 219 AFEFLVMPFGLTNAPATFYMLMNLVFYEYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFD 278
            FE+LVMP+G++ APA F   +N +  E  +  V+  +DDI+++S +  EH  H+K V  
Sbjct: 532 VFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQ 591

Query: 279 KLRQNQLYVKKEKCAFAQTCINFLEHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLG 338
           KL+   L + + KC F Q+ + F+ + IS        + I  + +WK P +  ++R FLG
Sbjct: 592 KLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLG 651

Query: 339 LANYYRRFVEGFSRRATPLTELLKKDHPWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKS 398
             NY R+F+   S+   PL  LLKKD  W W+     A E++K  +   P     D +K 
Sbjct: 652 SVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKK 711

Query: 399 FEIETNASDFALGDVLIQEG-----RPIAYESRKLNDAERRYTVSEKEMLALVHCLR 450
             +ET+ASD A+G VL Q+       P+ Y S K++ A+  Y+VS+KEMLA++  L+
Sbjct: 712 ILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLK 764

[Close]

BLAST of CmoCh09G012390 vs. Swiss-Prot
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.9e-69
Identity = 145/417 (34.77%), Postives = 235/417 (56.35%), Query Frame = 1


Query: 39  LAREEPTFMTIPLMEEVTTEETIPDEIKEVLNSYADIMSESLPQTLPPRRGIDHEIELLP 98
           ++  + T   +  +  +  E  +PD  KE  +  A+  +E LP+   P +G++ E+EL  
Sbjct: 352 ISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPK---PIKGLEFEVELTQ 411

Query: 99  E-VKPPAKNAYWMAPLELAELRKQLDELLTAGFICPAKAPYGAPVLFQKKKDGTLRLCID 158
           E  + P +N Y + P ++  +  ++++ L +G I  +KA    PV+F  KK+GTLR+ +D
Sbjct: 412 ENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVD 471

Query: 159 YRALNKVTVHNKYPLLIISDLFDQLHGAKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYG 218
           Y+ LNK    N YPL +I  L  ++ G+  FTKLD++S Y+ +R+ +GDE K  F    G
Sbjct: 472 YKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRG 531

Query: 219 AFEFLVMPFGLTNAPATFYMLMNLVFYEYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFD 278
            FE+LVMP+G++ APA F   +N +  E  +  V+  +DDI+++S +  EH  H+K V  
Sbjct: 532 VFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQ 591

Query: 279 KLRQNQLYVKKEKCAFAQTCINFLEHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLG 338
           KL+   L + + KC F Q+ + F+ + IS        + I  + +WK P +  ++R FLG
Sbjct: 592 KLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLG 651

Query: 339 LANYYRRFVEGFSRRATPLTELLKKDHPWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKS 398
             NY R+F+   S+   PL  LLKKD  W W+     A E++K  +   P     D +K 
Sbjct: 652 SVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKK 711

Query: 399 FEIETNASDFALGDVLIQEG-----RPIAYESRKLNDAERRYTVSEKEMLALVHCLR 450
             +ET+ASD A+G VL Q+       P+ Y S K++ A+  Y+VS+KEMLA++  L+
Sbjct: 712 ILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLK 764

[Close]

BLAST of CmoCh09G012390 vs. Swiss-Prot
Match: TF26_SCHPO (Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-6 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.9e-69
Identity = 145/417 (34.77%), Postives = 235/417 (56.35%), Query Frame = 1


Query: 39  LAREEPTFMTIPLMEEVTTEETIPDEIKEVLNSYADIMSESLPQTLPPRRGIDHEIELLP 98
           ++  + T   +  +  +  E  +PD  KE  +  A+  +E LP+   P +G++ E+EL  
Sbjct: 352 ISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPK---PIKGLEFEVELTQ 411

Query: 99  E-VKPPAKNAYWMAPLELAELRKQLDELLTAGFICPAKAPYGAPVLFQKKKDGTLRLCID 158
           E  + P +N Y + P ++  +  ++++ L +G I  +KA    PV+F  KK+GTLR+ +D
Sbjct: 412 ENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVD 471

Query: 159 YRALNKVTVHNKYPLLIISDLFDQLHGAKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYG 218
           Y+ LNK    N YPL +I  L  ++ G+  FTKLD++S Y+ +R+ +GDE K  F    G
Sbjct: 472 YKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRG 531

Query: 219 AFEFLVMPFGLTNAPATFYMLMNLVFYEYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFD 278
            FE+LVMP+G++ APA F   +N +  E  +  V+  +DDI+++S +  EH  H+K V  
Sbjct: 532 VFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQ 591

Query: 279 KLRQNQLYVKKEKCAFAQTCINFLEHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLG 338
           KL+   L + + KC F Q+ + F+ + IS        + I  + +WK P +  ++R FLG
Sbjct: 592 KLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLG 651

Query: 339 LANYYRRFVEGFSRRATPLTELLKKDHPWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKS 398
             NY R+F+   S+   PL  LLKKD  W W+     A E++K  +   P     D +K 
Sbjct: 652 SVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKK 711

Query: 399 FEIETNASDFALGDVLIQEG-----RPIAYESRKLNDAERRYTVSEKEMLALVHCLR 450
             +ET+ASD A+G VL Q+       P+ Y S K++ A+  Y+VS+KEMLA++  L+
Sbjct: 712 ILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLK 764

[Close]

BLAST of CmoCh09G012390 vs. Swiss-Prot
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.9e-69
Identity = 145/417 (34.77%), Postives = 235/417 (56.35%), Query Frame = 1


Query: 39  LAREEPTFMTIPLMEEVTTEETIPDEIKEVLNSYADIMSESLPQTLPPRRGIDHEIELLP 98
           ++  + T   +  +  +  E  +PD  KE  +  A+  +E LP+   P +G++ E+EL  
Sbjct: 352 ISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPK---PIKGLEFEVELTQ 411

Query: 99  E-VKPPAKNAYWMAPLELAELRKQLDELLTAGFICPAKAPYGAPVLFQKKKDGTLRLCID 158
           E  + P +N Y + P ++  +  ++++ L +G I  +KA    PV+F  KK+GTLR+ +D
Sbjct: 412 ENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVD 471

Query: 159 YRALNKVTVHNKYPLLIISDLFDQLHGAKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYG 218
           Y+ LNK    N YPL +I  L  ++ G+  FTKLD++S Y+ +R+ +GDE K  F    G
Sbjct: 472 YKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRG 531

Query: 219 AFEFLVMPFGLTNAPATFYMLMNLVFYEYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFD 278
            FE+LVMP+G++ APA F   +N +  E  +  V+  +DDI+++S +  EH  H+K V  
Sbjct: 532 VFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQ 591

Query: 279 KLRQNQLYVKKEKCAFAQTCINFLEHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLG 338
           KL+   L + + KC F Q+ + F+ + IS        + I  + +WK P +  ++R FLG
Sbjct: 592 KLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLG 651

Query: 339 LANYYRRFVEGFSRRATPLTELLKKDHPWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKS 398
             NY R+F+   S+   PL  LLKKD  W W+     A E++K  +   P     D +K 
Sbjct: 652 SVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKK 711

Query: 399 FEIETNASDFALGDVLIQEG-----RPIAYESRKLNDAERRYTVSEKEMLALVHCLR 450
             +ET+ASD A+G VL Q+       P+ Y S K++ A+  Y+VS+KEMLA++  L+
Sbjct: 712 ILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLK 764

[Close]

BLAST of CmoCh09G012390 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.9e-69
Identity = 145/417 (34.77%), Postives = 235/417 (56.35%), Query Frame = 1


Query: 39  LAREEPTFMTIPLMEEVTTEETIPDEIKEVLNSYADIMSESLPQTLPPRRGIDHEIELLP 98
           ++  + T   +  +  +  E  +PD  KE  +  A+  +E LP+   P +G++ E+EL  
Sbjct: 352 ISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPK---PIKGLEFEVELTQ 411

Query: 99  E-VKPPAKNAYWMAPLELAELRKQLDELLTAGFICPAKAPYGAPVLFQKKKDGTLRLCID 158
           E  + P +N Y + P ++  +  ++++ L +G I  +KA    PV+F  KK+GTLR+ +D
Sbjct: 412 ENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVD 471

Query: 159 YRALNKVTVHNKYPLLIISDLFDQLHGAKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYG 218
           Y+ LNK    N YPL +I  L  ++ G+  FTKLD++S Y+ +R+ +GDE K  F    G
Sbjct: 472 YKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRG 531

Query: 219 AFEFLVMPFGLTNAPATFYMLMNLVFYEYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFD 278
            FE+LVMP+G++ APA F   +N +  E  +  V+  +DDI+++S +  EH  H+K V  
Sbjct: 532 VFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQ 591

Query: 279 KLRQNQLYVKKEKCAFAQTCINFLEHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLG 338
           KL+   L + + KC F Q+ + F+ + IS        + I  + +WK P +  ++R FLG
Sbjct: 592 KLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLG 651

Query: 339 LANYYRRFVEGFSRRATPLTELLKKDHPWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKS 398
             NY R+F+   S+   PL  LLKKD  W W+     A E++K  +   P     D +K 
Sbjct: 652 SVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKK 711

Query: 399 FEIETNASDFALGDVLIQEG-----RPIAYESRKLNDAERRYTVSEKEMLALVHCLR 450
             +ET+ASD A+G VL Q+       P+ Y S K++ A+  Y+VS+KEMLA++  L+
Sbjct: 712 ILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLK 764

[Close]

BLAST of CmoCh09G012390 vs. TrEMBL
Match: A5BX03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032357 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 4.9e-152
Identity = 274/451 (60.75%), Postives = 341/451 (75.61%), Query Frame = 1


Query: 1   MPLAKCLVIIERNST-VIPASIKQPGNLRMISAIQLKRGLAREEPTFM-TIPLMEEVTTE 60
           +P  + + I+E     ++P   +      M+SA+Q+K+GL REE T++ T+   ++  + 
Sbjct: 529 LPFLRSMAILEEEKPCMVPTVTEGTPKTPMLSAMQVKKGLKREEVTYLATLKEEKDDGSG 588

Query: 61  ETIPDEIKEVLNSYADIMSESLPQTLPPRRGIDHEIELLPEVKPPAKNAYWMAPLELAEL 120
           E +P EIK VL+ + D+M   LP+ L PRR  +H+I+L    KP A   Y MAP EL EL
Sbjct: 589 EPMPKEIKGVLDEFKDVMXPELPKRLXPRREEBHKIKLEXGAKPRAMGPYRMAPPELEEL 648

Query: 121 RKQLDELLTAGFICPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVHNKYPLLIISDL 180
           R+QL ELL AGFI P+KAPYGAPVLFQKK DG+LR+CIDYRALNKVTV NKYP+ +I+DL
Sbjct: 649 RRQLKELLDAGFIQPSKAPYGAPVLFQKKHDGSLRMCIDYRALNKVTVKNKYPIPLIADL 708

Query: 181 FDQLHGAKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYGAFEFLVMPFGLTNAPATFYML 240
           FDQL  A+YFTKLD+RSGYYQVRIAEGDE KTT +TRYG++EFLVMPFGLTNAPATF  L
Sbjct: 709 FDQLGRARYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGSYEFLVMPFGLTNAPATFCTL 768

Query: 241 MNLVFYEYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCI 300
           MN +F+ YLD+FV+  LDDIV+YS TL+EH+ HL+ VF  LRQN+LYVKKEKC+FA+  +
Sbjct: 769 MNKIFHPYLDKFVVXYLDDIVIYSNTLKEHEEHLRKVFKILRQNKLYVKKEKCSFAKEEV 828

Query: 301 NFLEHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLGLANYYRRFVEGFSRRATPLTE 360
           NFL H I  G++ MD  K+KAIQEW  PT V  +RSFLGL NYYRRF++G+S RA PLT+
Sbjct: 829 NFLGHRIRDGKLMMDDSKVKAIQEWDPPTKVPQLRSFLGLVNYYRRFIKGYSGRAAPLTD 888

Query: 361 LLKKDHPWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKSFEIETNASDFALGDVLIQEGR 420
           LLKK+  W W  +CQ AFEDLK  +T  P   L D TK FE+ T+ASDFA+G VL+QE  
Sbjct: 889 LLKKNKAWEWDGRCQQAFEDLKKAVTEEPVLALPDHTKVFEVHTDASDFAIGGVLMQERH 948

Query: 421 PIAYESRKLNDAERRYTVSEKEMLALVHCLR 450
           PIA+ESRKLN+AERRYTV EKEM A+VHCLR
Sbjct: 949 PIAFESRKLNNAERRYTVQEKEMTAIVHCLR 979

[Close]

BLAST of CmoCh09G012390 vs. TrEMBL
Match: A5AUJ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040632 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 5.0e-149
Identity = 262/427 (61.36%), Postives = 331/427 (77.52%), Query Frame = 1


Query: 25  GNLRMISAIQLKRGLAREEPTFMT--IPLMEEVTTEETIPDEIKEVLNSYADIMSESLPQ 84
           G   M+SAIQLK+GL R + T++   I + E  T E  +PD + ++L  ++D+M   LP+
Sbjct: 491 GQPEMLSAIQLKKGLKRGQETYVAALIEIKEGQTME--VPDSVVKILKEFSDVMPAELPK 550

Query: 85  TLPPRRGIDHEIELLPEVKPPAKNAYWMAPLELAELRKQLDELLTAGFICPAKAPYGAPV 144
            LPPRR IDH+IELLP  K PA+  Y M+P EL ELRKQL ELL AG I P++APYGAPV
Sbjct: 551 ELPPRRPIDHKIELLPGTKAPAQAPYRMSPAELLELRKQLKELLDAGLIQPSRAPYGAPV 610

Query: 145 LFQKKKDGTLRLCIDYRALNKVTVHNKYPLLIISDLFDQLHGAKYFTKLDIRSGYYQVRI 204
           LFQKK DG+LR+C+DYRALNKVT+ NKYP+ + ++LFD+L  A YFTKLD+RSGY+QVR+
Sbjct: 611 LFQKKHDGSLRMCVDYRALNKVTIKNKYPIPLAAELFDRLSKASYFTKLDLRSGYWQVRV 670

Query: 205 AEGDESKTTFMTRYGAFEFLVMPFGLTNAPATFYMLMNLVFYEYLDQFVIVSLDDIVVYS 264
           A GDE KTT + RYG++EFLVMPFGLTNAPATF  LMN V ++YLD FV+V LDDIVVYS
Sbjct: 671 AAGDEGKTTCVXRYGSYEFLVMPFGLTNAPATFCNLMNDVLFDYLDXFVVVYLDDIVVYS 730

Query: 265 TTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLEHVISCGQIGMDSDKIKAIQE 324
            TL EH+ HL+LVF +LR+N+LYVK EKC FAQ  I FL H IS G I MD  K++AI E
Sbjct: 731 KTLTEHEKHLRLVFQRLRENRLYVKPEKCEFAQEEITFLGHKISAGLIRMDKGKVQAIME 790

Query: 325 WKVPTSVSDVRSFLGLANYYRRFVEGFSRRATPLTELLKKDHPWSWSNKCQMAFEDLKTT 384
           W VP+ V+++RSFLGLANYYRRF++G+S+  +PLT+LLKKD+ W WS +CQMAFE LK  
Sbjct: 791 WTVPSKVTELRSFLGLANYYRRFIKGYSKTVSPLTDLLKKDNQWDWSRQCQMAFESLKEA 850

Query: 385 MTRGPAFELVDVTKSFEIETNASDFALGDVLIQEGRPIAYESRKLNDAERRYTVSEKEML 444
           M+  P   L D+   FE++T+AS+ ALG VL+QEG P+A+ESRKLN+AE+RY+  EKEM 
Sbjct: 851 MSTEPXLRLPDLDLXFEVQTDASBRALGGVLVQEGHPVAFESRKLNNAEQRYSTHEKEMT 910

Query: 445 ALVHCLR 450
           A+VHCLR
Sbjct: 911 AVVHCLR 915

[Close]

BLAST of CmoCh09G012390 vs. TrEMBL
Match: A0A087PJF6_9PROT (Uncharacterized protein OS=Acetobacter malorum GN=AmDm5_3101 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 1.2e-147
Identity = 262/446 (58.74%), Postives = 338/446 (75.78%), Query Frame = 1


Query: 6   CLVIIERNSTVIPASIKQPGNLRMISAIQLKRGLAREEPTFM-TIPLMEEVTTEETIPDE 65
           C++   R   ++P   +     + +SAIQ  +   + E TF+ T+ L E       +  +
Sbjct: 365 CILADGRQPCLVPLERQAKKCTQHLSAIQFAKSWKKGEATFLATLILNEGEEKHGPLQKQ 424

Query: 66  IKEVLNSYADIMSESLPQTLPPRRGIDHEIELLPEVKPPAKNAYWMAPLELAELRKQLDE 125
           +++VL  +AD+M + LP+ LPPR+ +DH IEL P  KPP+K+ Y M+P EL ELRKQL+E
Sbjct: 425 VEDVLVEFADLMPKELPKKLPPRKEVDHAIELEPGAKPPSKSPYRMSPPELEELRKQLNE 484

Query: 126 LLTAGFICPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVHNKYPLLIISDLFDQLHG 185
           LL AG+I P+K+PYGAPVLFQ+KK+G+LRLCIDYRALNK+T+ NKYPL +I+DLFDQL  
Sbjct: 485 LLDAGYIQPSKSPYGAPVLFQRKKEGSLRLCIDYRALNKITIKNKYPLPLIADLFDQLGE 544

Query: 186 AKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYGAFEFLVMPFGLTNAPATFYMLMNLVFY 245
           A+YFTKLD+RSGYYQVRIA GDESKT  +TRYGAFE+ VMPFG+TNAPATF  LMN VF+
Sbjct: 545 ARYFTKLDLRSGYYQVRIAPGDESKTAMVTRYGAFEYKVMPFGMTNAPATFCTLMNKVFH 604

Query: 246 EYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLEHV 305
            YLD+FV+V +DDIVVYS TLEEH  HL++VF  LR+++LYVKKEKC+FA   + FL H 
Sbjct: 605 PYLDKFVVVYIDDIVVYSKTLEEHVKHLRIVFKTLREHELYVKKEKCSFATKEVEFLGHK 664

Query: 306 ISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLGLANYYRRFVEGFSRRATPLTELLKKDH 365
           I  G++ M+  KIKAIQEW+ PT V  +RSFLGLANYYRRF++G+S  A PLT+LLKK+ 
Sbjct: 665 IKEGKLMMEKGKIKAIQEWEPPTKVPTLRSFLGLANYYRRFIKGYSAIAAPLTDLLKKNK 724

Query: 366 PWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKSFEIETNASDFALGDVLIQEGRPIAYES 425
            W W+++CQ AFE LK  +       L D++K FE+ T+ASDFA+G VL+QEG PIAYES
Sbjct: 725 AWEWTDRCQEAFERLKKALMEELVLRLPDLSKPFELHTDASDFAIGGVLMQEGHPIAYES 784

Query: 426 RKLNDAERRYTVSEKEMLALVHCLRV 451
           RKLN+AE+RYT  EKEM A++HCLRV
Sbjct: 785 RKLNNAEKRYTTHEKEMTAIIHCLRV 810

[Close]

BLAST of CmoCh09G012390 vs. TrEMBL
Match: A5AXU3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031913 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 1.2e-147
Identity = 261/427 (61.12%), Postives = 328/427 (76.81%), Query Frame = 1


Query: 25  GNLRMISAIQLKRGLAREEPTFMT--IPLMEEVTTEETIPDEIKEVLNSYADIMSESLPQ 84
           G   M+SAIQLK+GL R + T++   I + E  T E  +PD + ++L  + D+M   LP+
Sbjct: 466 GQPEMLSAIQLKKGLKRGQETYVAALIXIKEGQTME--VPDSVVKILKEFXDVMPAELPK 525

Query: 85  TLPPRRGIDHEIELLPEVKPPAKNAYWMAPLELAELRKQLDELLTAGFICPAKAPYGAPV 144
            LPPRR IDH+IELLP  K PA+  Y M+P EL ELRKQL ELL AG I P++APYGAPV
Sbjct: 526 ELPPRRPIDHKIELLPGTKAPAQAPYRMSPAELLELRKQLKELLDAGLIQPSRAPYGAPV 585

Query: 145 LFQKKKDGTLRLCIDYRALNKVTVHNKYPLLIISDLFDQLHGAKYFTKLDIRSGYYQVRI 204
           +FQKK DG+LR+C+DYRALNKVT+ NKYP+ + ++LFD+L  A YFTKLD+RSGY+QVR+
Sbjct: 586 IFQKKHDGSLRMCVDYRALNKVTIKNKYPIPLAAELFDRLSKASYFTKLDLRSGYWQVRV 645

Query: 205 AEGDESKTTFMTRYGAFEFLVMPFGLTNAPATFYMLMNLVFYEYLDQFVIVSLDDIVVYS 264
             GDE KTT +TRYG++EFLVMPFGLTNAPATF  LMN V ++YLD FV+V LDDIVVYS
Sbjct: 646 XAGDEGKTTCVTRYGSYEFLVMPFGLTNAPATFCNLMNDVLFDYLDAFVVVYLDDIVVYS 705

Query: 265 TTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLEHVISCGQIGMDSDKIKAIQE 324
            TL EH+ HL+LVF +LR+N+LYVK EKC FAQ  I FL H IS G I MD  K++AI E
Sbjct: 706 KTLTEHEKHLRLVFQRLRENRLYVKPEKCEFAQEEITFLGHKISAGLIRMDKGKVQAIME 765

Query: 325 WKVPTSVSDVRSFLGLANYYRRFVEGFSRRATPLTELLKKDHPWSWSNKCQMAFEDLKTT 384
           W V + V+++RSFLGLANYYRRF++G+S+  +PLT+LLKKD+ W WS +CQMAFE LK  
Sbjct: 766 WTVXSKVTELRSFLGLANYYRRFIKGYSKTVSPLTDLLKKDNQWDWSRQCQMAFESLKEA 825

Query: 385 MTRGPAFELVDVTKSFEIETNASDFALGDVLIQEGRPIAYESRKLNDAERRYTVSEKEML 444
           M+  P   L D+   FE +T+ASD ALG VL+QEG P+A+ESRKLN+AE+RY+  EKEM 
Sbjct: 826 MSTEPVLRLPDLDLPFEXQTDASDRALGGVLVQEGHPVAFESRKLNNAEQRYSTHEKEMT 885

Query: 445 ALVHCLR 450
           A+VHCLR
Sbjct: 886 AVVHCLR 890

[Close]

BLAST of CmoCh09G012390 vs. TrEMBL
Match: A5AMU3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008296 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 3.6e-147
Identity = 261/427 (61.12%), Postives = 328/427 (76.81%), Query Frame = 1


Query: 25  GNLRMISAIQLKRGLAREEPTFMT--IPLMEEVTTEETIPDEIKEVLNSYADIMSESLPQ 84
           G   M+SAIQLK+GL R + T++   I + E  T E  +PD + ++L  + D+M   LP+
Sbjct: 22  GQPEMLSAIQLKKGLKRGQETYVAALIKIKEGQTME--VPDSVVKILKEFNDVMPAELPK 81

Query: 85  TLPPRRGIDHEIELLPEVKPPAKNAYWMAPLELAELRKQLDELLTAGFICPAKAPYGAPV 144
            LPPRR IDH+IELLP  K PA+  Y M+P EL ELRKQL ELL AG I P++APYGAPV
Sbjct: 82  ELPPRRPIDHKIELLPGTKAPAQAPYRMSPAELLELRKQLKELLDAGLIQPSRAPYGAPV 141

Query: 145 LFQKKKDGTLRLCIDYRALNKVTVHNKYPLLIISDLFDQLHGAKYFTKLDIRSGYYQVRI 204
           +FQKK DG+LR+C+DYRALNKVT+ NKYP+ + ++LFD+L  A YFTKLD+RSGY+QVR+
Sbjct: 142 IFQKKHDGSLRMCVDYRALNKVTIKNKYPIPLAAELFDRLSKASYFTKLDLRSGYWQVRV 201

Query: 205 AEGDESKTTFMTRYGAFEFLVMPFGLTNAPATFYMLMNLVFYEYLDQFVIVSLDDIVVYS 264
             GDE KTT +TRYG++EFLVMPFGLTNAPATF  LMN V ++YLD FV+V LDDIVVYS
Sbjct: 202 VAGDEGKTTCVTRYGSYEFLVMPFGLTNAPATFCNLMNDVLFDYLDAFVVVYLDDIVVYS 261

Query: 265 TTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLEHVISCGQIGMDSDKIKAIQE 324
            TL EH+ HL+L F +LR+N+LYVK EKC FAQ  I FL H IS G I MD  K++AI E
Sbjct: 262 KTLTEHEKHLRLXFXRLRENRLYVKPEKCEFAQEEITFLGHKISAGLIRMDKGKVQAIME 321

Query: 325 WKVPTSVSDVRSFLGLANYYRRFVEGFSRRATPLTELLKKDHPWSWSNKCQMAFEDLKTT 384
           W V + V+++RSFLGLANYYRRF++G+S+  +PLT+LLKKD+ W WS +CQMAFE LK  
Sbjct: 322 WTVLSKVTELRSFLGLANYYRRFIKGYSKTVSPLTDLLKKDNQWDWSRQCQMAFESLKXA 381

Query: 385 MTRGPAFELVDVTKSFEIETNASDFALGDVLIQEGRPIAYESRKLNDAERRYTVSEKEML 444
           M+  P   L D+   FEI+T+ASD ALG VL+QEG P+A+ESRKLN+AE+RY+  EKEM 
Sbjct: 382 MSTEPVLRLPDLDLPFEIQTDASDRALGGVLVQEGXPVAFESRKLNNAEQRYSTHEKEMT 441

Query: 445 ALVHCLR 450
           A+VHCLR
Sbjct: 442 AVVHCLR 446

[Close]

BLAST of CmoCh09G012390 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 8.8e-20
Identity = 50/130 (38.46%), Postives = 73/130 (56.15%), Query Frame = 1


Query: 271 HLKLVFDKLRQNQLYVKKEKCAFAQTCINFL--EHVISCGQIGMDSDKIKAIQEWKVPTS 330
           HL +V     Q+Q Y  ++KCAF Q  I +L   H+IS   +  D  K++A+  W  P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 331 VSDVRSFLGLANYYRRFVEGFSRRATPLTELLKKDHPWSWSNKCQMAFEDLKTTMTRGPA 390
            +++R FLGL  YYRRFV+ + +   PLTELLKK +   W+    +AF+ LK  +T  P 
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKK-NSLKWTEMAALAFKALKGAVTTLPV 122

Query: 391 FELVDVTKSF 399
             L D+   F
Sbjct: 123 LALPDLKLPF 131

[Close]

BLAST of CmoCh09G012390 vs. NCBI nr
Match: gi|659114583|ref|XP_008457127.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496873 [Cucumis melo])

HSP 1 Score: 650.2 bits (1676), Expect = 2.6e-183
Identity = 322/449 (71.71%), Postives = 373/449 (83.07%), Query Frame = 1


Query: 1   MPLAKCLVIIERNSTVIPASIKQPGNLRMISAIQLKRGLAREEPTFMTIPLMEEVTTEET 60
           MPLAKCLVI     +V+   ++QP  L+MISA+QLK+GL+R+EPTFM IPL     + ET
Sbjct: 21  MPLAKCLVITGPTPSVVQTDLRQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGET 80

Query: 61  IPDEIKEVLNSYADIMSESLPQTLPPRRGIDHEIELLPEVKPPAKNAYWMAPLELAELRK 120
           +P EI  VL  Y D+M +S P++LPPRR IDHEIEL+P  KP AKNAY MAP ELAELRK
Sbjct: 81  VPTEIVRVLEKYRDVMPDSFPKSLPPRRMIDHEIELVPGTKPRAKNAYRMAPPELAELRK 140

Query: 121 QLDELLTAGFICPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVHNKYPLLIISDLFD 180
           QLDELL AGFI PAKAPYGAPVLFQKKKDG+LRLCIDYRALNK+TV NKYPL II+DLFD
Sbjct: 141 QLDELLNAGFIRPAKAPYGAPVLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFD 200

Query: 181 QLHGAKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYGAFEFLVMPFGLTNAPATFYMLMN 240
           +LHGAKYF+KLD+RSGYYQVRIAEGDE KTT +TRYGAFEFLVMPFGLTNAPATF  LMN
Sbjct: 201 RLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMN 260

Query: 241 LVFYEYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINF 300
            VF+EYLD+FV+V LDDIVVYS T+EEH+ HL+ VF KL++NQLYVK+EK +FAQ  INF
Sbjct: 261 QVFHEYLDKFVVVYLDDIVVYSMTMEEHRDHLQKVFQKLKENQLYVKREKXSFAQERINF 320

Query: 301 LEHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLGLANYYRRFVEGFSRRATPLTELL 360
           L HVI CG+IGM+  KI AI +W +P SVS++RSFLGLANYYRRFVEGFS+RA+ LTELL
Sbjct: 321 LGHVIECGRIGMEEGKIAAICDWAMPKSVSELRSFLGLANYYRRFVEGFSKRASSLTELL 380

Query: 361 KKDHPWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKSFEIETNASDFALGDVLIQEGRPI 420
           KKD  W+W  +CQ AF+ LK  M  GP   + DVTK FE+ET+ASD+ALG +L+Q G PI
Sbjct: 381 KKDVHWNWDPECQAAFDGLKQAMMEGPRLGIADVTKPFEVETDASDYALGGMLLQNGHPI 440

Query: 421 AYESRKLNDAERRYTVSEKEMLALVHCLR 450
           AYESRKLN AERRYTVSEKEMLA+VHCLR
Sbjct: 441 AYESRKLNAAERRYTVSEKEMLAVVHCLR 469

[Close]

BLAST of CmoCh09G012390 vs. NCBI nr
Match: gi|1009175511|ref|XP_015868924.1| (PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba])

HSP 1 Score: 600.1 bits (1546), Expect = 3.1e-168
Identity = 286/449 (63.70%), Postives = 361/449 (80.40%), Query Frame = 1


Query: 1    MPLAKCLVIIERNSTVIPASIKQPGNLRMISAIQLKRGLAREEPTFMTIPLMEEVTTEET 60
            +P A  L+++   + VIP   KQ  N +++SA+Q K+G+ R+EP+++ + +  E   +ET
Sbjct: 714  IPAANSLLMMGEQTGVIPVQRKQLNNPKLLSALQFKKGVRRKEPSYIALVVAREGEDDET 773

Query: 61   IPDEIKEVLNSYADIMSESLPQTLPPRRGIDHEIELLPEVKPPAKNAYWMAPLELAELRK 120
             P  + + L S+ D+M ++LP+ LPPRR IDH IEL+P  KPPAK  Y MAP ELAELRK
Sbjct: 774  TPPMVLDALKSFNDVMPDNLPRNLPPRRDIDHNIELIPGAKPPAKAPYRMAPPELAELRK 833

Query: 121  QLDELLTAGFICPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVHNKYPLLIISDLFD 180
            QL ELL AGF+ P+KAPYGAPVLFQKKKDGTLRLC+DYRALNKVTV NKYP+ +I+DLFD
Sbjct: 834  QLGELLEAGFLRPSKAPYGAPVLFQKKKDGTLRLCVDYRALNKVTVRNKYPIPLIADLFD 893

Query: 181  QLHGAKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYGAFEFLVMPFGLTNAPATFYMLMN 240
            QL GAK+FTKLD+RSGYYQVRIAEGDE KTT +TRYGAFEFLVMPFGLTNAPATF  LMN
Sbjct: 894  QLSGAKFFTKLDLRSGYYQVRIAEGDEEKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMN 953

Query: 241  LVFYEYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINF 300
             VF ++LD+FV+V LDDIV++S TLEEH  H+++V  +LR+NQL+VKKEKCAF +  I F
Sbjct: 954  QVFRDFLDKFVVVYLDDIVIFSPTLEEHVEHIRMVLQRLRENQLFVKKEKCAFGRRQIKF 1013

Query: 301  LEHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLGLANYYRRFVEGFSRRATPLTELL 360
            L H+I  G+I MD +K+KAIQEWK P +V ++RSFLGLANYYRRFV+G+S++ATPLTELL
Sbjct: 1014 LGHIIEEGKIRMDMEKVKAIQEWKTPANVKELRSFLGLANYYRRFVKGYSKKATPLTELL 1073

Query: 361  KKDHPWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKSFEIETNASDFALGDVLIQEGRPI 420
            KK+ PW WS +C+ AF+DLK  M + P   L D+T+ FE++T+ASDFALG VL+Q+G P+
Sbjct: 1074 KKEVPWEWSKECEGAFQDLKEAMMKDPVLALPDITRPFEVQTDASDFALGGVLLQDGHPV 1133

Query: 421  AYESRKLNDAERRYTVSEKEMLALVHCLR 450
            AYESRKL+ AER YT  EKEMLA++HCLR
Sbjct: 1134 AYESRKLSAAERNYTAQEKEMLAVIHCLR 1162

[Close]

BLAST of CmoCh09G012390 vs. NCBI nr
Match: gi|1009161831|ref|XP_015899105.1| (PREDICTED: uncharacterized protein LOC107432471 [Ziziphus jujuba])

HSP 1 Score: 588.2 bits (1515), Expect = 1.2e-164
Identity = 280/449 (62.36%), Postives = 355/449 (79.06%), Query Frame = 1


Query: 1   MPLAKCLVIIERNSTVIPASIKQPGNLRMISAIQLKRGLAREEPTFMTIPLMEEVTTEET 60
           +P A  L+++   + V+P   KQ  N +++SA Q K+G+ R+EP+++ + +  E   +ET
Sbjct: 356 IPAANSLLMMGEQTGVVPVQRKQLNNPKLLSAFQFKKGVRRKEPSYIALVVAREGEDDET 415

Query: 61  IPDEIKEVLNSYADIMSESLPQTLPPRRGIDHEIELLPEVKPPAKNAYWMAPLELAELRK 120
            P  + + L S+ D+M ++LP+ LPPRR IDH IEL+P  KPPAK  Y MAP ELAELRK
Sbjct: 416 TPPMVLDALKSFNDVMPDNLPRNLPPRRDIDHNIELIPGAKPPAKALYRMAPPELAELRK 475

Query: 121 QLDELLTAGFICPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVHNKYPLLIISDLFD 180
           QL ELL AGF+ P+KAPYGAPVLFQKKKDGTLRLC+DYRALNKVTV NKYP+ +I+DLFD
Sbjct: 476 QLGELLEAGFLRPSKAPYGAPVLFQKKKDGTLRLCVDYRALNKVTVRNKYPIPLIADLFD 535

Query: 181 QLHGAKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYGAFEFLVMPFGLTNAPATFYMLMN 240
           QL GAK+FTKLD+RSGYYQVRIAEGDE KTT +TRYGAFEFLVMPF LTNAPATF  LMN
Sbjct: 536 QLSGAKFFTKLDLRSGYYQVRIAEGDEEKTTCVTRYGAFEFLVMPFELTNAPATFCTLMN 595

Query: 241 LVFYEYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINF 300
            VF ++LD+FV+V LDDIV++  TLEEH  H+++V  +LR+NQL+VKKEKCAF +  I F
Sbjct: 596 QVFRDFLDKFVVVYLDDIVIFRPTLEEHVEHIRMVLQRLRENQLFVKKEKCAFGRRQIKF 655

Query: 301 LEHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLGLANYYRRFVEGFSRRATPLTELL 360
           L H+I  G+I MD +K+KAIQEWK PT+V ++RSFLGLANYYRRFV+G+S++ATPL ELL
Sbjct: 656 LGHIIEEGKIRMDMEKVKAIQEWKTPTNVKELRSFLGLANYYRRFVKGYSKKATPLMELL 715

Query: 361 KKDHPWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKSFEIETNASDFALGDVLIQEGRPI 420
           KK+ PW WS +C+  F DLK  M + P   L D+ + FE++T+ASDFALG VL+Q+G P+
Sbjct: 716 KKEVPWEWSKECEGTFHDLKEAMMKDPVLALPDIARPFEVQTDASDFALGGVLLQDGHPV 775

Query: 421 AYESRKLNDAERRYTVSEKEMLALVHCLR 450
           AYESRKL+ AE+ YT  EKEMLA++HCLR
Sbjct: 776 AYESRKLSAAEKNYTAQEKEMLAVIHCLR 804

[Close]

BLAST of CmoCh09G012390 vs. NCBI nr
Match: gi|1009181571|ref|XP_015872243.1| (PREDICTED: uncharacterized protein LOC107409324, partial [Ziziphus jujuba])

HSP 1 Score: 586.6 bits (1511), Expect = 3.6e-164
Identity = 281/443 (63.43%), Postives = 353/443 (79.68%), Query Frame = 1


Query: 1   MPLAKCLVIIERNSTVIPASIKQPGNLRMISAIQLKRGLAREEPTFMTIPLMEEVTTEET 60
           +P A  L+++   + V+P   KQ  N +++SA+Q K+G+ R EP+++ + +  E   +ET
Sbjct: 427 IPAANSLLMMGEQTGVVPVQRKQLNNPKLLSALQFKKGVRRNEPSYIALVVAREGEDDET 486

Query: 61  IPDEIKEVLNSYADIMSESLPQTLPPRRGIDHEIELLPEVKPPAKNAYWMAPLELAELRK 120
            P  + + L S+ D+M ++LP+ LPPRR IDH IEL+P  KPPAK  Y MAP ELAELRK
Sbjct: 487 TPPMVLDALKSFNDVMPDNLPRNLPPRRDIDHNIELIPGAKPPAKAPYRMAPPELAELRK 546

Query: 121 QLDELLTAGFICPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVHNKYPLLIISDLFD 180
           QL ELL AGF+ P+KAPYGAPVLFQKKKDG LRLC+DYRALNKVTV NKYP+ +I+DLFD
Sbjct: 547 QLGELLEAGFLRPSKAPYGAPVLFQKKKDGILRLCVDYRALNKVTVRNKYPIPLIADLFD 606

Query: 181 QLHGAKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYGAFEFLVMPFGLTNAPATFYMLMN 240
           QL GAK+FTKLD+RSGYYQVRIAEGDE KTT +TRYGAFEFLVMPFGLTNAPATF  LMN
Sbjct: 607 QLSGAKFFTKLDLRSGYYQVRIAEGDEEKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMN 666

Query: 241 LVFYEYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINF 300
            VF ++LD+FV+V LDDIV++S TLEEH  H+++V  +LR+NQL+VKKEKCAF +  I F
Sbjct: 667 QVFRDFLDKFVVVYLDDIVIFSPTLEEHVEHIRMVLQRLRENQLFVKKEKCAFGRRQIKF 726

Query: 301 LEHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLGLANYYRRFVEGFSRRATPLTELL 360
           L H+I  G+I MD +K+KAIQEWK PT+V + RSFLGLANYYRRFV+G+S++ATPLTELL
Sbjct: 727 LGHIIEEGKIRMDMEKVKAIQEWKTPTNVKEFRSFLGLANYYRRFVKGYSKKATPLTELL 786

Query: 361 KKDHPWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKSFEIETNASDFALGDVLIQEGRPI 420
           KK+ PW WS +C+ AF+DLK  M + P   L D+T+ FE++T+ASDFALG VL+Q+G P+
Sbjct: 787 KKEVPWEWSKECEGAFQDLKEAMMKDPVLALPDITRPFEVQTDASDFALGGVLLQDGHPV 846

Query: 421 AYESRKLNDAERRYTVSEKEMLA 444
           AYESRKL+ AER YT  EKEMLA
Sbjct: 847 AYESRKLSAAERNYTAQEKEMLA 869

[Close]

BLAST of CmoCh09G012390 vs. NCBI nr
Match: gi|1009176455|ref|XP_015869440.1| (PREDICTED: uncharacterized protein LOC107406761 [Ziziphus jujuba])

HSP 1 Score: 563.1 bits (1450), Expect = 4.2e-157
Identity = 277/449 (61.69%), Postives = 343/449 (76.39%), Query Frame = 1


Query: 1   MPLAKCLVIIERNSTVIPASIKQPGNLRMISAIQLKRGLAREEPTFMTIPLMEEVTTEET 60
           +P    + I+E    +IP +I +P     +SA+QLK+G+ + EPTF+     EE  T + 
Sbjct: 353 LPRYNTVCIMEGGPCMIP-TIHKPSTSNRLSAMQLKKGVKKGEPTFLATLREEEEVTSKE 412

Query: 61  IPDEIKEVLNSYADIMSESLPQTLPPRRGIDHEIELLPEVKPPAKNAYWMAPLELAELRK 120
            P E+ +VL  + D+M   LP+ LPPRR +DH IEL P  KPPAK  Y M+P EL ELR+
Sbjct: 413 PPKEVSQVLEEFKDVMPPQLPKKLPPRREVDHCIELEPGAKPPAKAPYRMSPSELEELRR 472

Query: 121 QLDELLTAGFICPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVHNKYPLLIISDLFD 180
           QL ELL AG+I P+KAPYGAPVLFQKK DG+LRLCIDYRALNKVT+ NKYP+ +I+DLFD
Sbjct: 473 QLKELLDAGYIQPSKAPYGAPVLFQKKHDGSLRLCIDYRALNKVTIKNKYPIPLIADLFD 532

Query: 181 QLHGAKYFTKLDIRSGYYQVRIAEGDESKTTFMTRYGAFEFLVMPFGLTNAPATFYMLMN 240
           QL GA+YFTKLD+RSGYYQVRIAEGDE KTT +TRYGA+EFLVMPFGLTNAPATF  LMN
Sbjct: 533 QLGGARYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAYEFLVMPFGLTNAPATFCTLMN 592

Query: 241 LVFYEYLDQFVIVSLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINF 300
            +F+ YLD+FV+V LDDIV+YS TLEEH  HL++VF  L+ N+LYVK+EKC+FA   + F
Sbjct: 593 KIFHPYLDKFVVVYLDDIVIYSKTLEEHIHHLRIVFKVLKDNELYVKREKCSFATNEVYF 652

Query: 301 LEHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLGLANYYRRFVEGFSRRATPLTELL 360
           L H I  G++ MD  K+KAIQEW  PT VS++RSFLGL NYYRRF++G+S  A PLT+LL
Sbjct: 653 LGHKIKDGKLHMDEAKVKAIQEWDPPTKVSELRSFLGLVNYYRRFIKGYSALAAPLTDLL 712

Query: 361 KKDHPWSWSNKCQMAFEDLKTTMTRGPAFELVDVTKSFEIETNASDFALGDVLIQEGRPI 420
           KK+  WSWS +CQ AFE+LK  + + P   L D +K FE+ T+ASDFA+G VL+QE  PI
Sbjct: 713 KKNKTWSWSTQCQQAFENLKEAIMKEPVLALPDCSKPFEVHTDASDFAIGGVLMQERHPI 772

Query: 421 AYESRKLNDAERRYTVSEKEMLALVHCLR 450
           A+ESRKLND ERRYTV EKEM A++HCLR
Sbjct: 773 AFESRKLNDTERRYTVQEKEMTAIIHCLR 800

The following BLAST results are available for this feature:

BLAST of CmoCh09G012390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TF23_SCHPO	1.9e-69	34.77	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF25_SCHPO	1.9e-69	34.77	Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF26_SCHPO	1.9e-69	34.77	Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF22_SCHPO	1.9e-69	34.77	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF21_SCHPO	1.9e-69	34.77	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CmoCh09G012390 vs. TrEMBL


Match Name	E-value	Identity	Description
A5BX03_VITVI	4.9e-152	60.75	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032357 PE=4 SV=1	[more]
A5AUJ7_VITVI	5.0e-149	61.36	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040632 PE=4 SV=1	[more]
A0A087PJF6_9PROT	1.2e-147	58.74	Uncharacterized protein OS=Acetobacter malorum GN=AmDm5_3101 PE=4 SV=1	[more]
A5AXU3_VITVI	1.2e-147	61.12	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031913 PE=4 SV=1	[more]
A5AMU3_VITVI	3.6e-147	61.12	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008296 PE=4 SV=1	[more]

BLAST of CmoCh09G012390 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00860.1	8.8e-20	38.46	ATMG00860.1 DNA/RNA polymerases superfamily protein	[more]

BLAST of CmoCh09G012390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114583\|ref\|XP_008457127.1\|	2.6e-183	71.71	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496873 [Cucumis me...	[more]
gi\|1009175511\|ref\|XP_015868924.1\|	3.1e-168	63.70	PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba]	[more]
gi\|1009161831\|ref\|XP_015899105.1\|	1.2e-164	62.36	PREDICTED: uncharacterized protein LOC107432471 [Ziziphus jujuba]	[more]
gi\|1009181571\|ref\|XP_015872243.1\|	3.6e-164	63.43	PREDICTED: uncharacterized protein LOC107409324, partial [Ziziphus jujuba]	[more]
gi\|1009176455\|ref\|XP_015869440.1\|	4.2e-157	61.69	PREDICTED: uncharacterized protein LOC107406761 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G012390.1	CmoCh09G012390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 146..301 score: 4.4
IPR000477	Reverse transcriptase domain	PROFILE	PS50878	RT_POL	coord: 126..305 score: 12
None	No IPR available	GENE3D	G3DSA:3.10.10.10		coord: 94..226 score: 1.6
None	No IPR available	GENE3D	G3DSA:3.30.70.270		coord: 227..300 score: 4.
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 138..449 score: 1.7E
None	No IPR available	PANTHER	PTHR24559:SF201	SUBFAMILY NOT NAMED	coord: 138..449 score: 1.7E
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 68..449 score: 1.22E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh09G012390	Cucumber (Gy14) v2	cgybcmoB683
CmoCh09G012390	Melon (DHL92) v3.6.1	cmomedB017
CmoCh09G012390	Silver-seed gourd	carcmoB0929
CmoCh09G012390	Cucumber (Chinese Long) v3	cmocucB0027
CmoCh09G012390	Watermelon (97103) v2	cmowmbB024
CmoCh09G012390	Watermelon (97103) v2	cmowmbB033
CmoCh09G012390	Wax gourd	cmowgoB0008
CmoCh09G012390	Cucumber (Gy14) v1	cgycmoB0991
CmoCh09G012390	Cucurbita maxima (Rimu)	cmacmoB028
CmoCh09G012390	Cucurbita maxima (Rimu)	cmacmoB444
CmoCh09G012390	Wild cucumber (PI 183967)	cmocpiB023
CmoCh09G012390	Cucumber (Chinese Long) v2	cmocuB022
CmoCh09G012390	Melon (DHL92) v3.5.1	cmomeB015
CmoCh09G012390	Watermelon (Charleston Gray)	cmowcgB024
CmoCh09G012390	Watermelon (97103) v1	cmowmB010
CmoCh09G012390	Cucurbita pepo (Zucchini)	cmocpeB035
CmoCh09G012390	Bottle gourd (USVL1VR-Ls)	cmolsiB022