CmoCh09G011710 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G011710
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTransmembrane protein, putative
LocationCmo_Chr09 : 7845477 .. 7846249 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGTCAAAATAATGTCTCTTATTGTCGCAACTTTAGGTGTGATATCCTTTATATTTGGAGTCGTAGCTGAGAACAAGAAGGTAAGCTTCTGTTCATAAATTGTTTGATTCTTATTGTGTAGATATTTGTGAATTTGAAACAATCACAGCAAGATGAGAACCTCCCAACCCATGCAATATCATATAACTTTCCAAGCTCCGTCATTGATGGTCACTATCCTTTCTTTTTGTGTTTGCTTATGGGCAGCCTGCATCTGGAACTCCCATCCCAGGCAAAGGCATTGTTGTCTGTCAGTATCCAGTGGACCCAACTGTGGCCTTGGGATATCTTTCACTTGCGTTTCTTCTTGCTTCTTCAATTGCAGGATACTTCTCTTTGTTTAAGAGCACCAGTTTCTCTATTTTCTTCAACATTTCCCTGTAACTTCTCTTTCCAAATCACATCCTCTGTTACCTAAAAAGTGATTTCGAAACGTTATCAATCAAGCTACCTCTGTGTTTGTAGGTTCACAACTGGATTGGCTATAACTTTGCTCGTATGGCATACAGTCACTGAGCAAATTCACTTGACTCGCAACGTTTATCACAATCTCGAGACAGCATGCCCGACCGCTAAGACTGGTCTTCTAGGTGGTGGTGCATTTTTATCCCTTGATTCATCCCTCTTTTGGTTGGTTGCCTTGATGTTGGCTGGAAATGCTCGAGAGGACTACTTTGATGAAATAGAGGAAAACGGAGACAGTGCTGAGGCTCTTAAGAACAACGCATGA

mRNA sequence

ATGTCGGTCAAAATAATGTCTCTTATTGTCGCAACTTTAGGTGTGATATCCTTTATATTTGGAGTCGTAGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCATCCCAGGCAAAGGCATTGTTGTCTGTCAGTATCCAGTGGACCCAACTGTGGCCTTGGGATATCTTTCACTTGCGTTTCTTCTTGCTTCTTCAATTGCAGGATACTTCTCTTTGTTTAAGAGCACCAGTTTCTCTATTTTCTTCAACATTTCCCTGTTCACAACTGGATTGGCTATAACTTTGCTCGTATGGCATACAGTCACTGAGCAAATTCACTTGACTCGCAACGTTTATCACAATCTCGAGACAGCATGCCCGACCGCTAAGACTGGTCTTCTAGGTGGTGGTGCATTTTTATCCCTTGATTCATCCCTCTTTTGGTTGGTTGCCTTGATGTTGGCTGGAAATGCTCGAGAGGACTACTTTGATGAAATAGAGGAAAACGGAGACAGTGCTGAGGCTCTTAAGAACAACGCATGA

Coding sequence (CDS)

ATGTCGGTCAAAATAATGTCTCTTATTGTCGCAACTTTAGGTGTGATATCCTTTATATTTGGAGTCGTAGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCATCCCAGGCAAAGGCATTGTTGTCTGTCAGTATCCAGTGGACCCAACTGTGGCCTTGGGATATCTTTCACTTGCGTTTCTTCTTGCTTCTTCAATTGCAGGATACTTCTCTTTGTTTAAGAGCACCAGTTTCTCTATTTTCTTCAACATTTCCCTGTTCACAACTGGATTGGCTATAACTTTGCTCGTATGGCATACAGTCACTGAGCAAATTCACTTGACTCGCAACGTTTATCACAATCTCGAGACAGCATGCCCGACCGCTAAGACTGGTCTTCTAGGTGGTGGTGCATTTTTATCCCTTGATTCATCCCTCTTTTGGTTGGTTGCCTTGATGTTGGCTGGAAATGCTCGAGAGGACTACTTTGATGAAATAGAGGAAAACGGAGACAGTGCTGAGGCTCTTAAGAACAACGCATGA
Homology
[Close]
BLAST of CmoCh09G011710 vs. TrEMBL
Match: A0A0A0LHD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881600 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.1e-71
Identity = 147/187 (78.61%), Postives = 162/187 (86.63%), Query Frame = 1 

Query: 1   MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAF 60
           +SVK+MSLIVA LGV SFIFGV+AENKKPASGTPIPGKGIV+CQYP DPTV LGYLS+AF
Sbjct: 3   VSVKLMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAF 62

Query: 61  LLASSIAGYFSLF--------------KSTSFSIFFNISLFTTGLAITLLVWHTVTEQIH 120
           LLASS AGY SLF              KS+SFS FFNI+LFTTGLAITLLVW TVTEQ+H
Sbjct: 63  LLASSAAGYLSLFYPYQGKSVPRGAMFKSSSFSTFFNIALFTTGLAITLLVWPTVTEQLH 122

Query: 121 LTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSA 174
           LTRNV+HN+ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI E G ++
Sbjct: 123 LTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGSNS 182

[Close]
BLAST of CmoCh09G011710 vs. TrEMBL
Match: A0A0A0LEF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881610 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.9e-65
Identity = 140/188 (74.47%), Postives = 157/188 (83.51%), Query Frame = 1 

Query: 1   MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAF 60
           +SVK+MSL+V TLGVISF+FGVVAENKKPASGTPIPGKG VVC+Y  DPTVALG+LS  F
Sbjct: 3   VSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGHVVCKYQSDPTVALGFLSFMF 62

Query: 61  LLASSIAGYFSLF--------------KSTSFSIFFNISLFTTGLAITLLVWHTVTEQIH 120
           LLASS AGY SLF              KS++F  FFNI+LFTTGLAIT+LVW TVTEQ+H
Sbjct: 63  LLASSCAGYLSLFYPYEGKSVPRGAFFKSSTFFAFFNIALFTTGLAITMLVWPTVTEQLH 122

Query: 121 LTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENG-DS 174
           LTRNV+ NL+TACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI E G  +
Sbjct: 123 LTRNVHFNLDTACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGTTN 182

[Close]
BLAST of CmoCh09G011710 vs. TrEMBL
Match: Q9M089_ARATH (At4g31130 OS=Arabidopsis thaliana GN=At4g31130 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.4e-60
Identity = 122/174 (70.11%), Postives = 147/174 (84.48%), Query Frame = 1 

Query: 1   MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAF 60
           +S+K MSL+V+ LGV+SF+ GV+AENKKPASGTPI GKG+V+C+YP DPTVALGYLS AF
Sbjct: 3   VSMKQMSLVVSALGVLSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVALGYLSAAF 62

Query: 61  LLASSIAGYFSLF--------------KSTSFSIFFNISLFTTGLAITLLVWHTVTEQIH 120
           LLA ++AGY SLF              KSTSFS+FFNI+L T+GLA++LL+W T+TEQ+H
Sbjct: 63  LLACTVAGYKSLFISYKGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITEQLH 122

Query: 121 LTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIE 161
           LTRNV+ NLET+CPTAKTGLLGGGAF+SLDS LFWLVALMLA NARED+FDE+E
Sbjct: 123 LTRNVHRNLETSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDHFDEVE 176

[Close]
BLAST of CmoCh09G011710 vs. TrEMBL
Match: R0H1V8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005786mg PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-59
Identity = 122/176 (69.32%), Postives = 146/176 (82.95%), Query Frame = 1 

Query: 1   MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAF 60
           +S+K MSLIV+  GV+SF+ GV+AENKKPASGTPI GKG+V+C+YP DPTVALGYLS AF
Sbjct: 3   VSMKQMSLIVSAFGVVSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVALGYLSAAF 62

Query: 61  LLASSIAGYFS--------------LFKSTSFSIFFNISLFTTGLAITLLVWHTVTEQIH 120
           LLA ++AGY S              LFKSTSFS+FFNI+L T+GLA++LL+W T+TE +H
Sbjct: 63  LLACTVAGYKSLFISYKGKSVPNSALFKSTSFSVFFNIALITSGLALSLLLWPTITEHLH 122

Query: 121 LTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEEN 163
           LTRNV+ NLET+CPTAKTGLLGGGAF+SLDS LFWLVALMLA NARED+FDE+E N
Sbjct: 123 LTRNVHRNLETSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDHFDEVENN 178

[Close]
BLAST of CmoCh09G011710 vs. TrEMBL
Match: A0A067KRQ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11059 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.4e-59
Identity = 119/177 (67.23%), Postives = 147/177 (83.05%), Query Frame = 1 

Query: 1   MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAF 60
           ++V+ MS+IVATLG +SFIFGV+AENKKPA+GTPI GKG+V+C+YP DPTVALGYLS AF
Sbjct: 3   VTVRQMSVIVATLGTLSFIFGVIAENKKPAAGTPITGKGVVICKYPSDPTVALGYLSFAF 62

Query: 61  LLASSIAGYFSLF--------------KSTSFSIFFNISLFTTGLAITLLVWHTVTEQIH 120
           L+ S++AG++SLF              +STSF +FFNI++FT GLA  LL+W T+TEQ+H
Sbjct: 63  LVLSALAGFWSLFYPYKGKSIPQSALFQSTSFVVFFNIAVFTAGLAAALLLWPTITEQLH 122

Query: 121 LTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENG 164
           L R V+HN+ET CPTAKTGLLGGGAF+SLDS+LFWLVALMLA NAREDYFDE+E+ G
Sbjct: 123 LMRKVHHNMETDCPTAKTGLLGGGAFISLDSALFWLVALMLADNAREDYFDEVEKGG 179

[Close]
BLAST of CmoCh09G011710 vs. TAIR10
Match: AT4G31130.1 (AT4G31130.1 Protein of unknown function (DUF1218))

HSP 1 Score: 238.0 bits (606), Expect = 4.2e-63
Identity = 122/174 (70.11%), Postives = 147/174 (84.48%), Query Frame = 1 

Query: 1   MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAF 60
           +S+K MSL+V+ LGV+SF+ GV+AENKKPASGTPI GKG+V+C+YP DPTVALGYLS AF
Sbjct: 3   VSMKQMSLVVSALGVLSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVALGYLSAAF 62

Query: 61  LLASSIAGYFSLF--------------KSTSFSIFFNISLFTTGLAITLLVWHTVTEQIH 120
           LLA ++AGY SLF              KSTSFS+FFNI+L T+GLA++LL+W T+TEQ+H
Sbjct: 63  LLACTVAGYKSLFISYKGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITEQLH 122

Query: 121 LTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIE 161
           LTRNV+ NLET+CPTAKTGLLGGGAF+SLDS LFWLVALMLA NARED+FDE+E
Sbjct: 123 LTRNVHRNLETSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDHFDEVE 176

[Close]
BLAST of CmoCh09G011710 vs. NCBI nr
Match: gi|449437098|ref|XP_004136329.1| (PREDICTED: uncharacterized protein LOC101222863 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 3.0e-71
Identity = 147/187 (78.61%), Postives = 162/187 (86.63%), Query Frame = 1 

Query: 1   MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAF 60
           +SVK+MSLIVA LGV SFIFGV+AENKKPASGTPIPGKGIV+CQYP DPTV LGYLS+AF
Sbjct: 3   VSVKLMSLIVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAF 62

Query: 61  LLASSIAGYFSLF--------------KSTSFSIFFNISLFTTGLAITLLVWHTVTEQIH 120
           LLASS AGY SLF              KS+SFS FFNI+LFTTGLAITLLVW TVTEQ+H
Sbjct: 63  LLASSAAGYLSLFYPYQGKSVPRGAMFKSSSFSTFFNIALFTTGLAITLLVWPTVTEQLH 122

Query: 121 LTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSA 174
           LTRNV+HN+ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI E G ++
Sbjct: 123 LTRNVHHNIETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGSNS 182

[Close]
BLAST of CmoCh09G011710 vs. NCBI nr
Match: gi|659132707|ref|XP_008466341.1| (PREDICTED: uncharacterized protein LOC103503778 [Cucumis melo])

HSP 1 Score: 273.1 bits (697), Expect = 3.4e-70
Identity = 145/187 (77.54%), Postives = 161/187 (86.10%), Query Frame = 1 

Query: 1   MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAF 60
           +SVK+MSL VA LGV SFIFGV+AENKKPASGTPIPGKGIV+CQYP DPTV LGYLS+AF
Sbjct: 3   VSVKLMSLTVAALGVTSFIFGVIAENKKPASGTPIPGKGIVICQYPGDPTVVLGYLSVAF 62

Query: 61  LLASSIAGYFSLF--------------KSTSFSIFFNISLFTTGLAITLLVWHTVTEQIH 120
           LLASS+AGY SLF              KS+SFS FFNI+LFTTGLAITLLVW TVTEQ+H
Sbjct: 63  LLASSVAGYLSLFYPYQGKSVPRGAMFKSSSFSAFFNIALFTTGLAITLLVWPTVTEQLH 122

Query: 121 LTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSA 174
           L+RNV+HN ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI E G ++
Sbjct: 123 LSRNVHHNTETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGTNS 182

[Close]
BLAST of CmoCh09G011710 vs. NCBI nr
Match: gi|659132705|ref|XP_008466340.1| (PREDICTED: uncharacterized protein LOC103503777 [Cucumis melo])

HSP 1 Score: 263.1 bits (671), Expect = 3.5e-67
Identity = 141/187 (75.40%), Postives = 157/187 (83.96%), Query Frame = 1 

Query: 1   MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAF 60
           +SVK+MSL+V TLGVISF+FGVVAENKKPASGTPIPGKG+VVC+Y  DPTVALG+LS  F
Sbjct: 3   VSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGLVVCKYQSDPTVALGFLSFLF 62

Query: 61  LLASSIAGYFSLF--------------KSTSFSIFFNISLFTTGLAITLLVWHTVTEQIH 120
           LLASS AGY SLF              KS+SFS FFNI+LFTTGLAIT+LVW TVTEQ+H
Sbjct: 63  LLASSFAGYLSLFYPYEGKSVPRGAFFKSSSFSAFFNIALFTTGLAITMLVWPTVTEQLH 122

Query: 121 LTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSA 174
           LTRNV+ NL TACPTAKTGLLGGGAFLSLDSSL WLVALMLAGNAREDYFDEI E G + 
Sbjct: 123 LTRNVHFNLNTACPTAKTGLLGGGAFLSLDSSLLWLVALMLAGNAREDYFDEIAEKGTNV 182

[Close]
BLAST of CmoCh09G011710 vs. NCBI nr
Match: gi|449437094|ref|XP_004136327.1| (PREDICTED: uncharacterized protein LOC101222453 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 5.6e-65
Identity = 140/188 (74.47%), Postives = 157/188 (83.51%), Query Frame = 1 

Query: 1   MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAF 60
           +SVK+MSL+V TLGVISF+FGVVAENKKPASGTPIPGKG VVC+Y  DPTVALG+LS  F
Sbjct: 3   VSVKLMSLLVGTLGVISFVFGVVAENKKPASGTPIPGKGHVVCKYQSDPTVALGFLSFMF 62

Query: 61  LLASSIAGYFSLF--------------KSTSFSIFFNISLFTTGLAITLLVWHTVTEQIH 120
           LLASS AGY SLF              KS++F  FFNI+LFTTGLAIT+LVW TVTEQ+H
Sbjct: 63  LLASSCAGYLSLFYPYEGKSVPRGAFFKSSTFFAFFNIALFTTGLAITMLVWPTVTEQLH 122

Query: 121 LTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENG-DS 174
           LTRNV+ NL+TACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI E G  +
Sbjct: 123 LTRNVHFNLDTACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIAEKGTTN 182

[Close]
BLAST of CmoCh09G011710 vs. NCBI nr
Match: gi|15235839|ref|NP_194842.1| (uncharacterized protein [Arabidopsis thaliana])

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 122/174 (70.11%), Postives = 147/174 (84.48%), Query Frame = 1 

Query: 1   MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAF 60
           +S+K MSL+V+ LGV+SF+ GV+AENKKPASGTPI GKG+V+C+YP DPTVALGYLS AF
Sbjct: 3   VSMKQMSLVVSALGVLSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVALGYLSAAF 62

Query: 61  LLASSIAGYFSLF--------------KSTSFSIFFNISLFTTGLAITLLVWHTVTEQIH 120
           LLA ++AGY SLF              KSTSFS+FFNI+L T+GLA++LL+W T+TEQ+H
Sbjct: 63  LLACTVAGYKSLFISYKGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITEQLH 122

Query: 121 LTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIE 161
           LTRNV+ NLET+CPTAKTGLLGGGAF+SLDS LFWLVALMLA NARED+FDE+E
Sbjct: 123 LTRNVHRNLETSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDHFDEVE 176

The following BLAST results are available for this feature:
BLAST of CmoCh09G011710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh09G011710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHD9_CUCSA2.1e-7178.61Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881600 PE=4 SV=1[more]
A0A0A0LEF8_CUCSA3.9e-6574.47Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881610 PE=4 SV=1[more]
Q9M089_ARATH8.4e-6070.11At4g31130 OS=Arabidopsis thaliana GN=At4g31130 PE=1 SV=1[more]
R0H1V8_9BRAS1.4e-5969.32Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005786mg PE=4 SV=1[more]
A0A067KRQ1_JATCU5.4e-5967.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11059 PE=4 SV=1[more]
BLAST of CmoCh09G011710 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G31130.14.2e-6370.11 Protein of unknown function (DUF1218)[more]
BLAST of CmoCh09G011710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437098|ref|XP_004136329.1|3.0e-7178.61PREDICTED: uncharacterized protein LOC101222863 [Cucumis sativus][more]
gi|659132707|ref|XP_008466341.1|3.4e-7077.54PREDICTED: uncharacterized protein LOC103503778 [Cucumis melo][more]
gi|659132705|ref|XP_008466340.1|3.5e-6775.40PREDICTED: uncharacterized protein LOC103503777 [Cucumis melo][more]
gi|449437094|ref|XP_004136327.1|5.6e-6574.47PREDICTED: uncharacterized protein LOC101222453 [Cucumis sativus][more]
gi|15235839|ref|NP_194842.1|1.2e-5970.11uncharacterized protein [Arabidopsis thaliana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009606DUF1218
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G011710.1CmoCh09G011710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009606Protein of unknown function DUF1218PFAMPF06749DUF1218coord: 64..138
score: 4.1
NoneNo IPR availablePANTHERPTHR31769FAMILY NOT NAMEDcoord: 1..164
score: 1.5
NoneNo IPR availablePANTHERPTHR31769:SF9SUBFAMILY NOT NAMEDcoord: 1..164
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh09G011710Cucurbita pepo (Zucchini)cmocpeB021
CmoCh09G011710Cucurbita maxima (Rimu)cmacmoB027
CmoCh09G011710Cucurbita maxima (Rimu)cmacmoB441