CmoCh09G011230 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G011230
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr09 : 6408724 .. 6409590 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCGACTAAACAGCTGAACAAGTCCCATGTCGACAGATTAGTCGAAATAGAAGAACAAATGCAATACTTACGGGAAGTCCCTGACAGTATTCGATTCCTAGATGAGCGAGTGAAAGAACTTGCTGACAAGACCCTCGCCGTTGACGCAATAAAGGGTCGGCTGGATGAGTTACCCATTCAAGAAATAATGTACCGAATGGAAAACCTAGAAATAAAAACCACAAAGAATGGTGGTTTTGAGCGAGGAGACAGCTCGACAGGCTCTGCTGGCCTGATTGAGGAGCGAGTCGATGGACTAGACAGCTCCCAAAAAGCGATGTTTCAGATGGTCACTGAACTATCTGAAGATGTGAAAGCAGCCCTTGACGTAGTCAGGGTAGAAATGGCGGACATAAGCGCTAGAGTAAACGTTGCCGTAAGGGTGGTGGAGAACCAAGCCCCTACCTGGAGCACAACGCGACCCAACAAGGTCAAACTTCCTGAACCCAAGCCCTTCTCCAGGGCTCGGGACGCCAAGGCCTTAGAGAACTACATCTTCGACCTTGAGCAGTACTTTAAAGCTATTGACACTGAGATAAAGGAAGAAAAGATCACTGTGGCCACCATGCATTTGGCTGAGGATGCGAAACTGTGGTGGCGGTCAAAGTATGTGGACATCCAAGAGGGCCAATGCACAATAGACACTTGGGAGAGACTAAAACAGGAGCTTCAGTCTCAATTCTTCCTAAGGAATGTGGAGATCATGGCCAGAAGGAAATTATGCGACCTTAAACATACGAGCAGCATTCGAGAATATGTCAAACAGTTCTCGTTACTCATGTTAGACATTCGACAGATGTCTGAGTTAGATAAGATCTTCTAG

mRNA sequence

ATGTCTTCGACTAAACAGCTGAACAAGTCCCATGTCGACAGATTAGTCGAAATAGAAGAACAAATGCAATACTTACGGGAAGTCCCTGACAGTATTCGATTCCTAGATGAGCGAGTGAAAGAACTTGCTGACAAGACCCTCGCCGTTGACGCAATAAAGGGTCGGCTGGATGAGTTACCCATTCAAGAAATAATGTACCGAATGGAAAACCTAGAAATAAAAACCACAAAGAATGGTGGTTTTGAGCGAGGAGACAGCTCGACAGGCTCTGCTGGCCTGATTGAGGAGCGAGTCGATGGACTAGACAGCTCCCAAAAAGCGATGTTTCAGATGGTCACTGAACTATCTGAAGATGTGAAAGCAGCCCTTGACGTAGTCAGGGTAGAAATGGCGGACATAAGCGCTAGAGTAAACGTTGCCGTAAGGGTGGTGGAGAACCAAGCCCCTACCTGGAGCACAACGCGACCCAACAAGGTCAAACTTCCTGAACCCAAGCCCTTCTCCAGGGCTCGGGACGCCAAGGCCTTAGAGAACTACATCTTCGACCTTGAGCAGTACTTTAAAGCTATTGACACTGAGATAAAGGAAGAAAAGATCACTGTGGCCACCATGCATTTGGCTGAGGATGCGAAACTGTGGTGGCGGTCAAAGTATGTGGACATCCAAGAGGGCCAATGCACAATAGACACTTGGGAGAGACTAAAACAGGAGCTTCAGTCTCAATTCTTCCTAAGGAATGTGGAGATCATGGCCAGAAGGAAATTATGCGACCTTAAACATACGAGCAGCATTCGAGAATATGTCAAACAGTTCTCGTTACTCATGTTAGACATTCGACAGATGTCTGAGTTAGATAAGATCTTCTAG

Coding sequence (CDS)

ATGTCTTCGACTAAACAGCTGAACAAGTCCCATGTCGACAGATTAGTCGAAATAGAAGAACAAATGCAATACTTACGGGAAGTCCCTGACAGTATTCGATTCCTAGATGAGCGAGTGAAAGAACTTGCTGACAAGACCCTCGCCGTTGACGCAATAAAGGGTCGGCTGGATGAGTTACCCATTCAAGAAATAATGTACCGAATGGAAAACCTAGAAATAAAAACCACAAAGAATGGTGGTTTTGAGCGAGGAGACAGCTCGACAGGCTCTGCTGGCCTGATTGAGGAGCGAGTCGATGGACTAGACAGCTCCCAAAAAGCGATGTTTCAGATGGTCACTGAACTATCTGAAGATGTGAAAGCAGCCCTTGACGTAGTCAGGGTAGAAATGGCGGACATAAGCGCTAGAGTAAACGTTGCCGTAAGGGTGGTGGAGAACCAAGCCCCTACCTGGAGCACAACGCGACCCAACAAGGTCAAACTTCCTGAACCCAAGCCCTTCTCCAGGGCTCGGGACGCCAAGGCCTTAGAGAACTACATCTTCGACCTTGAGCAGTACTTTAAAGCTATTGACACTGAGATAAAGGAAGAAAAGATCACTGTGGCCACCATGCATTTGGCTGAGGATGCGAAACTGTGGTGGCGGTCAAAGTATGTGGACATCCAAGAGGGCCAATGCACAATAGACACTTGGGAGAGACTAAAACAGGAGCTTCAGTCTCAATTCTTCCTAAGGAATGTGGAGATCATGGCCAGAAGGAAATTATGCGACCTTAAACATACGAGCAGCATTCGAGAATATGTCAAACAGTTCTCGTTACTCATGTTAGACATTCGACAGATGTCTGAGTTAGATAAGATCTTCTAG
Homology
[Close]
BLAST of CmoCh09G011230 vs. TrEMBL
Match: W1P7W4_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00144p00067150 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 74/137 (54.01%), Postives = 97/137 (70.80%), Query Frame = 1 

Query: 151 WSTTRPNKVKLPEPKPFSRARDAKALENYIFDLEQYFKAIDTEIKEEKITVATMHLAEDA 210
           W    P K+ +PEP+ +  ARDAK LEN+++D+EQ F A+  E ++  +  ATM+L  DA
Sbjct: 49  WVVDAPPKIHIPEPRCYDGARDAKELENFLWDIEQDFWAVRCE-EDAMVPTATMYLTGDA 108

Query: 211 KLWWRSKYVDIQEGQCTIDTWERLKQELQSQFFLRNVEIMARRKLCDLKHTSSIREYVKQ 270
           KLWWR+ Y D+Q G+C ID WE  K+EL++QF L NVE +AR+ L  LK   SIREYVKQ
Sbjct: 109 KLWWRTNYEDMQSGRCKIDIWEDHKRELKAQFLLENVEYLARKSLKKLKQMGSIREYVKQ 168

Query: 271 FSLLMLDIRQMSELDKI 288
           FS LML+IR MSE DK+
Sbjct: 169 FSALMLEIRDMSEKDKL 184

[Close]
BLAST of CmoCh09G011230 vs. TrEMBL
Match: A0A067LEW5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10748 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.4e-32
Identity = 99/306 (32.35%), Postives = 160/306 (52.29%), Query Frame = 1 

Query: 1   MSSTKQLNKSHVDRLVEIEEQMQYLREVPDSIRFLDERVKELADKTLAVDAIKGRLDELP 60
           MS T ++ K+   R+ EI   M + + V +S         +L +  +     K R+ E  
Sbjct: 1   MSKTARI-KALERRVDEIVTLMNHNKVVGESTSNTVINQHDLRETRIESLEEKLRVIETT 60

Query: 61  IQEIMYRMENLEIKTTKNGGFERGDSSTGSAGLIEERVDGLDSSQKAMFQMVTELSEDVK 120
           + E+ +  + L +     GG     ++T     +E R+  L+     +     +  E VK
Sbjct: 61  LSELAHSKQQLTLALATQGG--EASNTTKRIDRLETRISKLEGLPSKLEATHKDFCEYVK 120

Query: 121 AALDVVRV-----------------EMADISARVNVAVRVVENQA-PTWSTTRPNKVKLP 180
           + ++ V+                  E A+I  +VN+ V    N + PT    R   +++P
Sbjct: 121 SIVEEVQTKVQSFSTELAKVTGIMNEFAEIKGKVNLLVAAAGNTSGPTQDFVR---IEIP 180

Query: 181 EPKPFSRARDAKALENYIFDLEQYFKAIDTEIKEEKITVATMHLAEDAKLWWRSKYVDIQ 240
           EP PF   RDA+ ++N++FD+E YF+AI+    E+++ +  M+L +D KLWWR K  +++
Sbjct: 181 EPSPFKGIRDAREVDNFLFDIEAYFEAINYHSNEQRLKLVPMYLIDDGKLWWRGKVKEMK 240

Query: 241 EGQCTIDTWERLKQELQSQFFLRNVEIMARRKLCDLKHTSSIREYVKQFSLLMLDIRQMS 289
            G+ TI TWE   Q L+S F+  NV   ARRKL +L+HT SIREYV+ FS +ML+I  MS
Sbjct: 241 SGRITIKTWEEFCQVLRSSFYPTNVSYNARRKLSELQHTDSIREYVRNFSHIMLEIPNMS 300

[Close]
BLAST of CmoCh09G011230 vs. TrEMBL
Match: A5B1A3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028082 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.3e-29
Identity = 74/195 (37.95%), Postives = 115/195 (58.97%), Query Frame = 1 

Query: 94  IEERVDGLDSSQKAMFQMVTELSEDVKAALDVVRVEMADISARVNVAVRVVENQAPTWST 153
           + E++  L      MF  V    E + A +D       D   R  +A+      A   +T
Sbjct: 70  LREQIQDLREGVMTMFASVESRMEALAARMDA-----RDQEIRQELAIYKTAVSARVMAT 129

Query: 154 TRPNKVKLPEPKPFSRARDAKALENYIFDLEQYFKAIDTEIKEEKITVATMHLAEDAKLW 213
               +V++P+P  FS  RDAK L+N+++ +E+YF+AI    +  K+  AT++  ++A LW
Sbjct: 130 HEAPRVEVPKPHTFSGKRDAKELDNFLWHMERYFEAIALMDEATKVRTATLYFTDNATLW 189

Query: 214 WRSKYVDIQEGQCTIDTWERLKQELQSQFFLRNVEIMARRKLCDLKHTSSIREYVKQFSL 273
           WR ++ DI+ G CTIDTW+  K+E++ QF+  +V  +AR+ L  LKHT SIREYVK+FS 
Sbjct: 190 WRRRFADIERGTCTIDTWDAFKREIKRQFYPEDVAYIARKSLKRLKHTGSIREYVKEFST 249

Query: 274 LMLDIRQMSELDKIF 289
           LML+I  M+E + +F
Sbjct: 250 LMLEIPNMAEEELLF 259

[Close]
BLAST of CmoCh09G011230 vs. TrEMBL
Match: A5BVZ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028502 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.7e-29
Identity = 70/134 (52.24%), Postives = 96/134 (71.64%), Query Frame = 1 

Query: 156 PNKVKLPEPKPFSRARDAKALENYIFDLEQYFKAIDTEIKEEKITVATMHLAEDAKLWWR 215
           P+KV++PEPK F+  R+AK LEN+++D+EQ+FKA       EK+++ +M+L  DAKLWWR
Sbjct: 76  PSKVRVPEPKGFNGNRNAKELENFLWDVEQFFKAAHVP-DGEKVSITSMYLTSDAKLWWR 135

Query: 216 SKYV-DIQEGQCTIDTWERLKQELQSQFFLRNVEIMARRKLCDLKHTSSIREYVKQFSLL 275
           ++   D + G+  I TWE LK+EL+ QF   N   +AR  L  LKHT S+REYVK+FS L
Sbjct: 136 TRMEDDAESGRPQITTWETLKKELKDQFLPTNTAWVAREALKRLKHTGSVREYVKEFSSL 195

Query: 276 MLDIRQMSELDKIF 289
           MLDI+ MSE DK+F
Sbjct: 196 MLDIKNMSEEDKLF 208

[Close]
BLAST of CmoCh09G011230 vs. TrEMBL
Match: A5BH97_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038599 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-28
Identity = 68/162 (41.98%), Postives = 109/162 (67.28%), Query Frame = 1 

Query: 127 RVEMADISARVNVAVRVVENQAPTWSTTRPNKVKLPEPKPFSRARDAKALENYIFDLEQY 186
           R+E  D   R  +A+  V   A   +T   ++V++P+P  FS  RDAK L+N+++ +E+Y
Sbjct: 11  RMESRDQEFRQELAMYKVAVSARFMATHEASRVEVPKPHGFSGKRDAKELDNFLWHMERY 70

Query: 187 FKAIDTEIKEEKITVATMHLAEDAKLWWRSKYVDIQEGQCTIDTWERLKQELQSQFFLRN 246
           F+AI    +  K+  AT++L + A LWWR ++ D+++G CTI+TWE  K+E++ QF+  +
Sbjct: 71  FEAITLTDEATKLRTATLYLTDTATLWWRQRFADMEKGICTIETWEDFKREIKRQFYPED 130

Query: 247 VEIMARRKLCDLKHTSSIREYVKQFSLLMLDIRQMSELDKIF 289
           V  +AR+ +  LKHTSSIR+YVK+FS LML+I  M+E + +F
Sbjct: 131 VAYLARKNMRRLKHTSSIRDYVKKFSSLMLEIPNMTEKELLF 172

[Close]
BLAST of CmoCh09G011230 vs. NCBI nr
Match: gi|1009161113|ref|XP_015898721.1| (PREDICTED: uncharacterized protein LOC107432159 [Ziziphus jujuba])

HSP 1 Score: 196.1 bits (497), Expect = 8.7e-47
Identity = 99/231 (42.86%), Postives = 155/231 (67.10%), Query Frame = 1 

Query: 62  QEIMYRMENLEIKTTKNGGFERGDSSTGSAG----LIEERVDGLDSSQKAMFQMVTELSE 121
           QE+  +ME L+   ++    ER  ++ G+ G       ER   ++ + + +   V EL+E
Sbjct: 27  QEVFEKMETLDDIASRVSALERNQTTWGNTGPSSSTAGERDGAMEEAIERLMSTVNELTE 86

Query: 122 DVKAALDVVRVEMADISARVNVAVRVVENQAPTWSTTRPNKVKLPEPKPFSRARDAKALE 181
           + +A ++ +++EM  I+ ++ + +R VEN+          ++K+PEP+ +  ARDAK LE
Sbjct: 87  EFQATVEALKIEMGQINTKLAITMRAVENRPAVPMGGDYGRMKVPEPRAYGGARDAKELE 146

Query: 182 NYIFDLEQYFKAIDTEIKEEKITVATMHLAEDAKLWWRSKYVDIQEGQCTIDTWERLKQE 241
           N++FD+EQYF+AI  + +E K+T+ATM+L  DAKLWWRSKY DI   +C IDTW++L++E
Sbjct: 147 NFLFDMEQYFRAIKPDSEETKVTMATMYLTNDAKLWWRSKYEDIMNNRCIIDTWDQLQKE 206

Query: 242 LQSQFFLRNVEIMARRKLCDLKHTSSIREYVKQFSLLMLDIRQMSELDKIF 289
           L++QF   NV+ +ARR L +L+ TS++R+YVK FS LMLDIR MSE DK+F
Sbjct: 207 LKNQFLPENVDYIARRHLRELRQTSNVRDYVKAFSALMLDIRDMSEKDKLF 257

[Close]
BLAST of CmoCh09G011230 vs. NCBI nr
Match: gi|1009175511|ref|XP_015868924.1| (PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba])

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 112/283 (39.58%), Postives = 179/283 (63.25%), Query Frame = 1 

Query: 10  SHVDRLVEIEEQMQYLREVPDSIRFLDERVKELADKTLAVDAIKGRLDELPIQEIMYRME 69
           SH  ++ ++  +M++     D+I   D+++ ELA    A   I+G       QE   +ME
Sbjct: 178 SHSHKMPKLTNEMRF-----DNI---DQQLGELAGVVNA--HIRGH----NWQEAFEKME 237

Query: 70  NLEIKTTKNGGFERGDSSTGSAG----LIEERVDGLDSSQKAMFQMVTELSEDVKAALDV 129
            L+   ++    ER  ++ G+AG       ER   ++ + + +   V EL+ED +A ++ 
Sbjct: 238 TLDDIASRVSALERNQTTWGNAGPSSSTAGERDGAMEEAIERLMSTVNELTEDFRATVEA 297

Query: 130 VRVEMADISARVNVAVRVVENQAPTWSTTRPNKVKLPEPKPFSRARDAKALENYIFDLEQ 189
           +++EM  I+ ++ + +R VEN+          ++K+PEP+ +  ARDAK LEN++FD+EQ
Sbjct: 298 LKIEMGQINTKLAITMRAVENRPAVPVGGDYGRMKVPEPRAYGGARDAKELENFLFDMEQ 357

Query: 190 YFKAIDTEIKEEKITVATMHLAEDAKLWWRSKYVDIQEGQCTIDTWERLKQELQSQFFLR 249
           YF+AI  + +E K+T+ATM+L  DAKLWWRSKY DI+  +C IDTW++L++EL++QF   
Sbjct: 358 YFRAIKPDSEETKVTMATMYLTNDAKLWWRSKYEDIKNNRCIIDTWDQLQKELKNQFLPE 417

Query: 250 NVEIMARRKLCDLKHTSSIREYVKQFSLLMLDIRQMSELDKIF 289
           NV+ +ARR L +L+ T ++R+YVK FS LMLDIR MSE DK+F
Sbjct: 418 NVDYIARRHLRELRQTGNVRDYVKAFSALMLDIRDMSEKDKLF 446

[Close]
BLAST of CmoCh09G011230 vs. NCBI nr
Match: gi|1009165187|ref|XP_015900908.1| (PREDICTED: uncharacterized protein LOC107434012 [Ziziphus jujuba])

HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45
Identity = 98/231 (42.42%), Postives = 154/231 (66.67%), Query Frame = 1 

Query: 62  QEIMYRMENLEIKTTKNGGFERGDSSTGSAG----LIEERVDGLDSSQKAMFQMVTELSE 121
           QE   + E L+   ++    ER  ++ G+AG       ER   ++ + + +   V EL+E
Sbjct: 34  QEAFEKRETLDDIASRVSALERNQTTWGNAGPSSSTTGERDGAMEEAIERLMSTVNELTE 93

Query: 122 DVKAALDVVRVEMADISARVNVAVRVVENQAPTWSTTRPNKVKLPEPKPFSRARDAKALE 181
           D +A ++ +++EM  I+ ++ + +R VEN+          ++K+PEP+ +  ARDAK LE
Sbjct: 94  DFRATVEALKIEMGQINTKLAITMRAVENRPAVPVGGDYGRMKVPEPRAYGGARDAKELE 153

Query: 182 NYIFDLEQYFKAIDTEIKEEKITVATMHLAEDAKLWWRSKYVDIQEGQCTIDTWERLKQE 241
           N++FD+EQYF+AI  + +E K+T+ATM+L  DAKLWWRSKY DI+  +C IDTW++L++E
Sbjct: 154 NFLFDMEQYFRAIKPDSEETKVTMATMYLTNDAKLWWRSKYEDIKNNRCIIDTWDQLQKE 213

Query: 242 LQSQFFLRNVEIMARRKLCDLKHTSSIREYVKQFSLLMLDIRQMSELDKIF 289
           L++Q   +NV+ +ARR L +L+ T ++R+YVK FS LMLDIR MSE DK+F
Sbjct: 214 LKNQSLPKNVDYIARRHLRELRQTGNVRDYVKAFSALMLDIRDMSEKDKLF 264

[Close]
BLAST of CmoCh09G011230 vs. NCBI nr
Match: gi|659121588|ref|XP_008460733.1| (PREDICTED: uncharacterized protein LOC103499495, partial [Cucumis melo])

HSP 1 Score: 191.4 bits (485), Expect = 2.1e-45
Identity = 94/141 (66.67%), Postives = 112/141 (79.43%), Query Frame = 1 

Query: 146 NQAPTWSTTRPNKVKLPEPKPFSRARDAKALENYIFDLEQYFKAIDTEIKEEKITVATMH 205
           NQ P        KVK+P+PKPF   RDAKALEN+ FDLEQYFK  +T  +E K+T+ATM+
Sbjct: 3   NQVPVGGAVPVTKVKVPKPKPFYGVRDAKALENFTFDLEQYFKVTNTVTEEAKVTLATMY 62

Query: 206 LAEDAKLWWRSKYVDIQEGQCTIDTWERLKQELQSQFFLRNVEIMARRKLCDLKHTSSIR 265
           L EDAKLWWRS+Y+DIQEG+CTIDTW+ LK+EL S+FF  NVEI+A RKL DLKHT SI+
Sbjct: 63  LCEDAKLWWRSRYMDIQEGRCTIDTWDVLKKELHSEFFPENVEILAWRKLRDLKHTCSIQ 122

Query: 266 EYVKQFSLLMLDIRQMSELDK 287
           EYVKQF++LMLDI  MSE DK
Sbjct: 123 EYVKQFAVLMLDIHDMSEKDK 143

[Close]
BLAST of CmoCh09G011230 vs. NCBI nr
Match: gi|1009180596|ref|XP_015871709.1| (PREDICTED: uncharacterized protein LOC107408804 [Ziziphus jujuba])

HSP 1 Score: 170.6 bits (431), Expect = 3.9e-39
Identity = 82/159 (51.57%), Postives = 117/159 (73.58%), Query Frame = 1 

Query: 130 MADISARVNVAVRVVENQAPTWSTTRPNKVKLPEPKPFSRARDAKALENYIFDLEQYFKA 189
           M  I+ ++ + +R VEN+          ++K+PEP+ +  ARDAK LEN++FD+EQYF+A
Sbjct: 1   MGQINTKLAITMRAVENRPAVPMGGDYGRMKVPEPRAYGGARDAKELENFLFDMEQYFRA 60

Query: 190 IDTEIKEEKITVATMHLAEDAKLWWRSKYVDIQEGQCTIDTWERLKQELQSQFFLRNVEI 249
           I  + +E K+T+ATM+L  DAKLWWRSKY DI   +C IDTW++L++EL++QF   NV+ 
Sbjct: 61  IKPDSEETKVTMATMYLTNDAKLWWRSKYEDIMNNRCIIDTWDQLQKELKNQFLPENVDY 120

Query: 250 MARRKLCDLKHTSSIREYVKQFSLLMLDIRQMSELDKIF 289
           +ARR L +L+ TS++R+YVK FS LMLDIR MSE DK+F
Sbjct: 121 IARRHLRELRQTSNVRDYVKAFSALMLDIRDMSEKDKLF 159

The following BLAST results are available for this feature:
BLAST of CmoCh09G011230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh09G011230 vs. TrEMBL
Match NameE-valueIdentityDescription
W1P7W4_AMBTC1.5e-3254.01Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00144p00067150 PE=4 SV=... [more]
A0A067LEW5_JATCU9.4e-3232.35Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10748 PE=4 SV=1[more]
A5B1A3_VITVI3.3e-2937.95Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028082 PE=4 SV=1[more]
A5BVZ5_VITVI9.7e-2952.24Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028502 PE=4 SV=1[more]
A5BH97_VITVI1.3e-2841.98Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038599 PE=4 SV=1[more]
BLAST of CmoCh09G011230 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh09G011230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1009161113|ref|XP_015898721.1|8.7e-4742.86PREDICTED: uncharacterized protein LOC107432159 [Ziziphus jujuba][more]
gi|1009175511|ref|XP_015868924.1|1.1e-4639.58PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba][more]
gi|1009165187|ref|XP_015900908.1|1.6e-4542.42PREDICTED: uncharacterized protein LOC107434012 [Ziziphus jujuba][more]
gi|659121588|ref|XP_008460733.1|2.1e-4566.67PREDICTED: uncharacterized protein LOC103499495, partial [Cucumis melo][more]
gi|1009180596|ref|XP_015871709.1|3.9e-3951.57PREDICTED: uncharacterized protein LOC107408804 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005162Retrotrans_gag_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G011230.1CmoCh09G011230.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 201..286
score: 5.0
NoneNo IPR availableunknownCoilCoilcoord: 221..241
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh09G011230Bhi09G001232Wax gourdcmowgoB0036
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh09G011230Wax gourdcmowgoB0025
CmoCh09G011230Cucurbita maxima (Rimu)cmacmoB436
CmoCh09G011230Cucurbita moschata (Rifu)cmocmoB009
CmoCh09G011230Cucurbita moschata (Rifu)cmocmoB029
CmoCh09G011230Cucurbita moschata (Rifu)cmocmoB018
CmoCh09G011230Cucumber (Gy14) v1cgycmoB0130
CmoCh09G011230Cucurbita maxima (Rimu)cmacmoB027
CmoCh09G011230Cucurbita maxima (Rimu)cmacmoB283
CmoCh09G011230Cucurbita maxima (Rimu)cmacmoB675
CmoCh09G011230Wild cucumber (PI 183967)cmocpiB033
CmoCh09G011230Wild cucumber (PI 183967)cmocpiB035
CmoCh09G011230Cucumber (Chinese Long) v2cmocuB032
CmoCh09G011230Melon (DHL92) v3.5.1cmomeB006
CmoCh09G011230Melon (DHL92) v3.5.1cmomeB008
CmoCh09G011230Watermelon (Charleston Gray)cmowcgB002
CmoCh09G011230Watermelon (97103) v1cmowmB002
CmoCh09G011230Cucurbita pepo (Zucchini)cmocpeB014
CmoCh09G011230Cucurbita pepo (Zucchini)cmocpeB021
CmoCh09G011230Cucurbita pepo (Zucchini)cmocpeB034
CmoCh09G011230Bottle gourd (USVL1VR-Ls)cmolsiB007
CmoCh09G011230Cucumber (Gy14) v2cgybcmoB869
CmoCh09G011230Melon (DHL92) v3.6.1cmomedB004
CmoCh09G011230Silver-seed gourdcarcmoB0091
CmoCh09G011230Silver-seed gourdcarcmoB0380
CmoCh09G011230Silver-seed gourdcarcmoB1116
CmoCh09G011230Cucumber (Chinese Long) v3cmocucB0039
CmoCh09G011230Watermelon (97103) v2cmowmbB036