CmoCh09G010440 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G010440
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDna damage-inducible 1
LocationCmo_Chr09 : 5593760 .. 5600334 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGAACGGCTTCAACAAACATCGAATTGAGGGATTGGAAAAGGCGAAGGCAAAAGAAAACCCAAATACTGTAGTCAATTACCTTTCTTAATCTCCAAGTTCTTCGTGAAGTTGAATTCGAGCTCCGCAATTTCACTCAGATTTCTCCGCGAAGATTCTCAATCCGAGGTGATTCAGTTTACAGAAGAAGAAGAAGAAGAAGAAGATGAAAATCACTGTAATGACAGCCGACGAACAGATTCTTTCCTTGGATGTTGATCCCAATGAATCTGTAAGTTTCTTTATCTTGTTCATTCAGAAACGCCCAACTCCACATTCCTGCATTATCTTCTTTGTTCGATTATATCTTCTTTGTTAAAGCTCTTCCTCTTCGCTGCCAAATAGGTGGAAAACGTGAAAGCTCTGCTGGAGGTTGAGGTGAGGATTTGTCTTTTGTCTTGATTGTTGTGATCGGTAGCTGAGGAAAATTGGGATATAGAACTTGTGGGAATTGAACGTTTGGATCTTTACTGGGGAATGAGTTAGCCTTTTGGCGATTTTGCTACGTTTTGTGATCCGAAACTTCGTACATTTAAGATTAAGTTCAGTAGAAGCTCTCTTTTTCAATGGTTAGCTCATTCTATGTATGTGTGACTTTGTTGATGCTCAGACCCAAGTACCGCTTCAGCGGCAGCAGCTGCTGTACAATGGCAAGGAGATGAAAAATTTTGAAAAATTGAGAGGCTTGGGTGTTAAAGACGAAGATTTGATTATGATGGTGTCTGCTGGCGCTTCTAGGTGCGTTTCTCTCCTTCTCATACTGCAGAATCATTTATTTTGATCTGGAGGTATAGTCTTATAGGATACTCGATAACATTGTTGAGGATCGTTGGGTGGGAGTCCCACACATTGACTAATTAAAGGGATGTTCATGGGTTTATAAGGAATACATCTCCATTGGTATGAGGTCTTTTGGGGAAACCAAAAGCAAAGTCATGGGAGCTTATGCTTAAAGTGGACAATATCATACCATTGTGGAGGGTCGTGATTTCTGACAAACATAACCTAGTAATTGCACCCGAATAACTATGATTACCAATGGGTCTTATGGATTAGTTGATTAGTTTAGTAATTTCCAAATTATTTTGTTTGCTGAGATCTTAACTAAACTTCTTTTTATACTACAATATGTCATAAATGGGGATAAAATGTAAAGAAGGCCCCTGTTATTATTTTCTCTAAAAATAAATATCCATATTCTCTCTGAATCGCCAATGAGACCTATGAAATCTTTGAGAATTGACCACATTTTTCTCACCCTTTATCTAGATTTCTACCATCTCAGTCTTCTCTTTCTTAGACTTCGACAAAAATATAAAAAAGATAGTATGCTACACTTCATGGAAATACAAGCGGTTCCCAAACAACCCAAAGTCAAAGTTTGAGGCTATTAAGGACTCCCTAACCATTATCGTGGAAGCTGCTTTTGCCTCTCACTTTTTTGAAGACTAAGAAATACCTCAAAGAGTTGACTAAGATCATACTAATCAGGATGATAGCGACGAACAAGGACAAACCTTTCAATTGAAGGGTGGTGCTCACCTTGTTATTGGAAGGAGGTTCAAAAGACTTAGTGGTAATCTCAGCATTGATAACATCAGACACAGAAATATAGCCTCCTTAGAAAATGATTTGGAAGTACATACATGAGGGTGAAGCTCTATAGTGCAGAATTGCTAAAGGGAAGTATGGGACTTACTCAATTGACTCTAGGCAAAATAATAAGGATAAAACTATATAATCCACAAGACCTCCTTGGCATCATATCATCAAGCAAAAAAGCCTCATTGAACAAAACTCCATTGCTCACTCTCAATGCCTCCTCAATGAACCAACTCAGTGGCTCCCTAATGAACTAAGAATCATCTCCTTTATACACTGAAATTTTGAAAGACTCTTGTCGAAGGAAAATTAGTTTTTGCTTATGGGAGCATGCTCATGGTGATATCAAGACACAAGCTACGGTCCAAAGACTTTGACTATTGAGAAGCTTATGCGCCCTTTCCAATGGGTGAAGAAGGAGCGCACTTGGTTCAGTGGGAAGTCATTGAGAAGCTTGTAAACTTGGGGGGTTAGAAATTGAGAATTTAAGGACTCGTAACAAATCTCTGTTAGCTAAATGGCTTTGGTGTTTCCTCGTTGAGCTTAATTCTCTTTGGCATAGGATTATTGCTAGCAAGTAGGACCCTCATCTTTTTGAGTGGCCGTCAGGTGGAGTTAAAGATCAGTGGGTGGGGGATATACACCTCTCCTCTACATTTTACTGTATCTATCATTTGTCTTTTTTTAATTTAAAATTGTTTGTTGTCTGACTTTTGGTCTGGTCGGGAGCTCAGTTTCCTTCTCTTTTGGGTTTCGTCACTCTTGGTTCAATAGGGAAGTGACAAATGTTGTCTTTCTATTGCCTTCGATTGGGGAATTTGGTTTAGGTTTGGGAGGAGAGATATTCGTGCTTGGAGTCCCATTCCTTTGAAGGAATTCTCTTGTAAATCCTTCTTTTGCTGTTTGATCCTCTAGTATGTCCGTCTTTTCTGCTCTTTGGAGGTTAAAGATTTCAAGGAATAAGAAGTTCTTTACCTGGCAAGTTTTACACGGACGAGTTAACAATTTGGATAGGTTTTGAGGAAAATGCCCTGTTAGCCTATTTTGTTGCATTCTCGGTCGGAAGCCAAAGGAAGACTTGGATCACATTATTTGGAAATGTGAGTTCTTGAGATTCGTTTGAAATTCGTTTTTTCAGATGTTCAACTTCTTGCTAGTCCGTCACAAGGACAATAGTGATATAATCAGAAAGTTCCTCCTCCATTTGCCTTTTTGTGAGAGGGTCAGTTCTTATGGCTTGTTGGGTCTGTGCTATCTAATAGAGCATTTAGAGGTTTGGAAGGGCTCCTAGTGATGTTTGGCTTTGATTTTGAAGATCTTTTATAATTTTTCTATAGGTAAGATTGCATTTGGAGCCCCATTCTCTAATAGTACTTCCTTTTGTGGGCTTGGGTTTTTGTATGTTCTTGTATTCTTTCTAATTTTCTCACGAAAGTTGTTATTAGAAAAAAAGGGATTCTGAGTCACGACACCTCTTCATCCATTGCACCATAGCTCAAAATTTTGTGTCCTTCATCCTCCATAGCTTCAGCTGGTCCGCTGGTCTACCAGCTAATACATCAGATTTTATCTCCAAAATTATCATTGACCAACCTCTCCAGAATGAGAAGCAAAGTCCTTGGCTTTACCTTGTGAAGATGGCTGGACAGGAATCAAAGAACCTTAAATGGGACCAAATCTACTTACAAGTTTTTACTTAGCAATGTTCTTCTAATGGCTTTGTTTTGATGTCATCCCCCCTTTGGTTACTGTCTTACCATACTTTTGGCCTAATGAATGTCCATTCTGTAACTTCTTTTTGCAAAATTTCTTTCATCGTCGTCTTCCAAAAAGATTTCTTTCAAAATGAAATATGTTTCATCTAAAAAAAAACCATCTTTGTCAGACAATTTGGTTTAAAAATACACTTCCATTCTTTAAAATAACTGTATAGATTAGGTCAATGCTCGGGACGTAATTCATTCACCTTTTTTGACTCTAAGAATGAAAGATATCAAATGTTGGGTTGCATATGGTTGTTTATACACTTGGGAACGTGATTTATGATGCCAATGACCAATAATATATTGGCTTTTGAAGCCAATAATATTTAGTTGCCACACACTAATTTTTACAAAAGGAAAGGGAGGGGAAAGGCCTTCCAACGACGAAGGTGGATTACAAAAAACTATAATTGTTAACATAATTATTTATTATTTTTTTTATAAAAAAACTAGAGTATTGTATTGGAATACGGTGTTCAGTAGAAAGGCTTTAACCATAAAGCTCCTTTGAACGCTGCCCTTGAAACTCAAATTACTACTCATCGCAATAGCACTTACAGTATTTTGTTCTTCTTTTGTGTGACATACAACGCGGTGTGTTTTTGGTTACTGTTCAAGGGACGAGAAGTGCTGTTCAAATTACCCATTATTTTGCACTCCTTTGCATGCTTTTTATTCAAAATCTAATATCAATAACATTGCAGTGCTTCTACCAATAACTTGAGCTTCAACCCAGATGGTTCTGCAGTGAACCCTGAAGCCTTTCAGCAACACATTAGGCGTGATTCAAATACAATGGCTCAACTTTTTCAGGTAAAAACTGACGTGTTGCTTCGTTACAATAAAGATTTTCTTTTGAGATAGAAGTCACAACTTATCCTTTTTTTCTTGGGGCAACAAAACAAAAATTTCATTGATATTTCAAGAGTTACAATAAGGATATAGAAACTCCACCTAAAAGGTCACGAGAAATCAAGTCAATTACAATTGATTGCACTTACATAATAATTACAGTCTTACAGAAGTCACTAGAATTAGCTCACAAGAAGCCGCTTGGTATTTAATTAATTCCAACCTAGCTTCCTACTGCTAGATTATTTGATTCCTATTGGCCCAAATTTCATGAAATAGTGCTCAAGTCATATTAACTCACAAAAATTTTGCCTCTCATCAGAATGTATGTCCACTAGTTGCAAACTATAATTCTCAAGTTGCATCAAAATCCCAATTGATTCAATGTCTTTTGCATGAAAAAGTCCCATAACATTTTGATGAAAGAACAAATGAAACGTGTTATCCTTCCTTTGATCTCAGTACACGTACATAGGCTGATATTCCAGAAAAGACAGCATTTTGAAGTGCTAGAGATATATTTTTTATAGTGAACTTTCTGGTCTTCCATAATGCATACACCACGGATGATGAAAGAGGTTGTCGGTTTGAATCCCTCCACCTCACATATGATTTAATATTCTCAAATAATGCATACACCCACCTCCTTTGAAATCAAAGATTTTATCTAAAACAACACACAGATCTAATGAGTTAAAGCTCCCAAGCTCATAACTGGGAACCAAGAAGCTTTATAATCTTTCTTATTTATGCATTCGATTTTCAGTCCTTGAATAGTTTAAACATAAACAAACAGGATAGCAAGATGCTGGATCGTTATTGCTATGTACACTGAGTGCAGATCAATTGATTTCATGTATTAACTAGTTTCTGTATTGAGCTTCATTTTCTTTATGACGGTTATGCAACTAGTGAGTAATTGTTCAAATCGTACATGGGCTTGACAGAGTGACCCTGAATTGGCACAAGCTATTGTTGGAAACAACCTTAATAATCTACAACAGATTTTAAGAGAGCGTCATCGTCAGAGATCTGTACTACAGCGTCAACAAGAAGAGGAGATGGTAAGTAGGTTATTTATTAGTCTTTATTAATAGCCTAATTGATCGAGAATCTGATATTGATCTCCTTATTCTGGTCTATTAGGCCCTTCTGTATGCAGATCCTTTTGATGTTGAGGCCCAAAAGAAGATTGAAGCTGCAATTCGTCAGGTTAGAATATTTTATCATCCTATTTTCTTCCAGCATAAATTACAAGTTGTTGCCGGGTGACATTGATGGTCAAATGGTGAGTTAGGAATGGGTTGGGCTTATATGAAGATCATTTTTCCACCATAAAATTAGGATACCAAGAGGGCTCTGTCAGGTCTTGTTTTAGGTTTCTTCTTTTACTGCACACAGACATAATTCTCTCCTGGTTGAAATTTGAAGAGTTATTGACACTAAACAATGTTTGATACTGACTTCAGTTTTCATTATATGAAAAATGATTTCTGTTTTAAATTACCAATACCTATGCAGAAAGGAATTGATGAAAATTGGGCTGCAGCTCTTGAACACAATCCTGAAGCTTTTGCAAGAGTGGTAAGTGTTACATTGACCAACATTGTCCACTTGTATTGTATTTTGTTTCATGGTTTGTCGTTTCATGTGTAACTCTTCAGGTCATGTTGTACGTTGACATGGAAGTTAATGGTGTTCCATTAAAGGTTAGTGGATTTAACACACATTATTCATTTTAATTTCTCTTCTACTACATTTTAGAAAATGTTAGAAGGCACTGCATTTCAATTGGTTAAAATCCTTATATATCAAATTCAACTGTTTGTGGTATATGGACATTTTTTTCTTTTTGTCAACTGAGGAGAGAAGGTTAATTGCTTCAATGGTATTGTTTTAGGCGTTTGTTGATAGCGGAGCTCAATCAACAATTATATCAAAAAGCTGTGCTGAGAAATGTGGGTATGTGGAATCTATGCATTATCTGATTTTCCCCTCTCTATACTTGCATTAGTAATTGGCTTTCATCATCATTATTTCTATGCGCTACCTGATTATATTTGTAAAATGCAAAGTATGTGTCATAGTCTAGCAAGACGGAAATTAGTTGATACTTAATGCCAGCTAATTGGCTGCAACATTTTTTTTTTTGATGAACCATTAGCCATGACATTATAAAATCTCTAATGCATTTCTCCCCGGCCTCGCCTTTCACCCTTAACGACCGTAAAGCCTCCGATCATGCTTTCTCTCCTTGGCTACAACTCATCCCTGTAACAGTGATCTTAGAACTGCTCCAAATGGGATGTCACACTTGA

mRNA sequence

ATTTGAACGGCTTCAACAAACATCGAATTGAGGGATTGGAAAAGGCGAAGGCAAAAGAAAACCCAAATACTGTAGTCAATTACCTTTCTTAATCTCCAAGTTCTTCGTGAAGTTGAATTCGAGCTCCGCAATTTCACTCAGATTTCTCCGCGAAGATTCTCAATCCGAGGTGATTCAGTTTACAGAAGAAGAAGAAGAAGAAGAAGATGAAAATCACTGTAATGACAGCCGACGAACAGATTCTTTCCTTGGATGTTGATCCCAATGAATCTACCCAAGTACCGCTTCAGCGGCAGCAGCTGCTGTACAATGGCAAGGAGATGAAAAATTTTGAAAAATTGAGAGGCTTGGGTGTTAAAGACGAAGATTTGATTATGATGGTGTCTGCTGGCGCTTCTAGCTTCAGCTGGTCCGCTGGTCTACCAGCTAATACATCAGATTTTATCTCCAAAATTATCATTGACCAACCTCTCCAGAATGAGAAGCAAAGTCCTTGGCTTTACCTTGTGAAGATGGCTGGACAGGAATCAAAGAACCTTAAATGGGACCAAATCTACTTACAAATTAGGTCAATGCTCGGGACTGCTTCTACCAATAACTTGAGCTTCAACCCAGATGGTTCTGCAGTGAACCCTGAAGCCTTTCAGCAACACATTAGGCGTGATTCAAATACAATGGCTCAACTTTTTCAGAGTGACCCTGAATTGGCACAAGCTATTGTTGGAAACAACCTTAATAATCTACAACAGATTTTAAGAGAGCGTCATCGTCAGAGATCTGTACTACAGCGTCAACAAGAAGAGGAGATGGCCCTTCTGTATGCAGATCCTTTTGATGTTGAGGCCCAAAAGAAGATTGAAGCTGCAATTCGTCAGAAAGGAATTGATGAAAATTGGGCTGCAGCTCTTGAACACAATCCTGAAGCTTTTGCAAGAGTGGTCATGTTGTACGTTGACATGGAAGTTAATGGTGTTCCATTAAAGGCGTTTGTTGATAGCGGAGCTCAATCAACAATTATATCAAAAAGCTGTGCTGAGAAATGTGGCCATGACATTATAAAATCTCTAATGCATTTCTCCCCGGCCTCGCCTTTCACCCTTAACGACCGTAAAGCCTCCGATCATGCTTTCTCTCCTTGGCTACAACTCATCCCTGTAACAGTGATCTTAGAACTGCTCCAAATGGGATGTCACACTTGA

Coding sequence (CDS)

ATGAAAATCACTGTAATGACAGCCGACGAACAGATTCTTTCCTTGGATGTTGATCCCAATGAATCTACCCAAGTACCGCTTCAGCGGCAGCAGCTGCTGTACAATGGCAAGGAGATGAAAAATTTTGAAAAATTGAGAGGCTTGGGTGTTAAAGACGAAGATTTGATTATGATGGTGTCTGCTGGCGCTTCTAGCTTCAGCTGGTCCGCTGGTCTACCAGCTAATACATCAGATTTTATCTCCAAAATTATCATTGACCAACCTCTCCAGAATGAGAAGCAAAGTCCTTGGCTTTACCTTGTGAAGATGGCTGGACAGGAATCAAAGAACCTTAAATGGGACCAAATCTACTTACAAATTAGGTCAATGCTCGGGACTGCTTCTACCAATAACTTGAGCTTCAACCCAGATGGTTCTGCAGTGAACCCTGAAGCCTTTCAGCAACACATTAGGCGTGATTCAAATACAATGGCTCAACTTTTTCAGAGTGACCCTGAATTGGCACAAGCTATTGTTGGAAACAACCTTAATAATCTACAACAGATTTTAAGAGAGCGTCATCGTCAGAGATCTGTACTACAGCGTCAACAAGAAGAGGAGATGGCCCTTCTGTATGCAGATCCTTTTGATGTTGAGGCCCAAAAGAAGATTGAAGCTGCAATTCGTCAGAAAGGAATTGATGAAAATTGGGCTGCAGCTCTTGAACACAATCCTGAAGCTTTTGCAAGAGTGGTCATGTTGTACGTTGACATGGAAGTTAATGGTGTTCCATTAAAGGCGTTTGTTGATAGCGGAGCTCAATCAACAATTATATCAAAAAGCTGTGCTGAGAAATGTGGCCATGACATTATAAAATCTCTAATGCATTTCTCCCCGGCCTCGCCTTTCACCCTTAACGACCGTAAAGCCTCCGATCATGCTTTCTCTCCTTGGCTACAACTCATCCCTGTAACAGTGATCTTAGAACTGCTCCAAATGGGATGTCACACTTGA
Homology
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BLAST of CmoCh09G010440 vs. Swiss-Prot
Match: DDI1_PHANO (DNA damage-inducible protein 1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=DDI1 PE=3 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-27
Identity = 66/139 (47.48%), Postives = 92/139 (66.19%), Query Frame = 1 

Query: 142 NPEAFQQHIRRDSNTMAQLFQSDPELAQAIVGNNLNNLQQILRERHRQRSVLQRQQEEEM 201
           +PEA +Q + R+    A+L Q DPEL   +  N+ +  ++    R       +R+++ ++
Sbjct: 101 DPEAVRQQVLRNPQVQAELRQRDPELLAIM--NDADRWREAFASRQNSAQNAERERQNQI 160

Query: 202 ALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAF 261
           ALL  DPF+VEAQ+KIE  IRQ+ + EN   A   NPE F RV MLY++ EVNGVP+KAF
Sbjct: 161 ALLNEDPFNVEAQRKIEDIIRQERVVENLEKAYNENPEVFVRVHMLYINTEVNGVPVKAF 220

Query: 262 VDSGAQSTIISKSCAEKCG 281
           VDSGAQ+TI+S  CAE+CG
Sbjct: 221 VDSGAQATIMSPDCAERCG 237

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BLAST of CmoCh09G010440 vs. Swiss-Prot
Match: DDI1_RAT (Protein DDI1 homolog 1 OS=Rattus norvegicus GN=Ddi1 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.9e-27
Identity = 69/156 (44.23%), Postives = 104/156 (66.67%), Query Frame = 1 

Query: 125 GTASTNNLSFNPDGSAVNPEAFQQHIRRDSNTMAQLFQSDPELAQAIVGNNLNNLQQILR 184
           G AS  N++F  D ++  P   +  +  + + ++ L + +P LA+A++  NL    Q+L 
Sbjct: 133 GLASGENMAFAQDLNS--PALIRSMLLSNPHDLSLLKERNPALAEALLSGNLETFSQVLV 192

Query: 185 ERHRQRSVLQRQQEEEMALLY-ADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFAR 244
           E+ R+R++    +E+EM  LY ADPFD E Q +IE  IRQ+ I+EN   A+E  PE+F +
Sbjct: 193 EQQRERAM----REQEMFRLYSADPFDQETQARIEEEIRQQNIEENMNIAMEEAPESFGQ 252

Query: 245 VVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAEKC 280
           V MLY++ +VNG PLKAFVDSGAQ TI+S++CAE+C
Sbjct: 253 VAMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERC 282

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BLAST of CmoCh09G010440 vs. Swiss-Prot
Match: DDI2_XENLA (Protein DDI1 homolog 2 OS=Xenopus laevis GN=ddi2 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.8e-27
Identity = 61/138 (44.20%), Postives = 98/138 (71.01%), Query Frame = 1 

Query: 142 NPEAFQQHIRRDSNTMAQLFQSDPELAQAIVGNNLNNLQQILRERHRQRSVLQRQQEEEM 201
           NP   +Q +  + + ++ L + +P LA+A++  +L    ++L+E+ ++R+   R+++E +
Sbjct: 128 NPALLRQMLLANPHELSLLKERNPPLAEALLSGDLEKFTKVLQEQQQERA---RREQERI 187

Query: 202 ALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAF 261
            L  ADPFD++AQ KIE  IRQ  I+EN   A+E  PE+F +VVMLY++ +VNG P+KAF
Sbjct: 188 RLYSADPFDLDAQAKIEEDIRQHNIEENMTIAMEEAPESFGQVVMLYINCKVNGYPVKAF 247

Query: 262 VDSGAQSTIISKSCAEKC 280
           VDSGAQ TI+S++CAE+C
Sbjct: 248 VDSGAQMTIMSQACAERC 262

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BLAST of CmoCh09G010440 vs. Swiss-Prot
Match: DDI2_XENTR (Protein DDI1 homolog 2 OS=Xenopus tropicalis GN=ddi2 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-26
Identity = 61/138 (44.20%), Postives = 98/138 (71.01%), Query Frame = 1 

Query: 142 NPEAFQQHIRRDSNTMAQLFQSDPELAQAIVGNNLNNLQQILRERHRQRSVLQRQQEEEM 201
           NP   ++ +  + + ++ L + +P LA+A++  +L    ++L E+ ++R+   R+++E +
Sbjct: 129 NPALLREMLLANPHELSLLKERNPPLAEALLSGDLEKFTKVLLEQQQERA---RREQERI 188

Query: 202 ALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAF 261
            L  ADPFD+EAQ KIE  IRQ+ I+EN   A+E  PE+F +VVMLY++ +VNG P+KAF
Sbjct: 189 RLYSADPFDLEAQAKIEEDIRQQNIEENMTIAMEEAPESFGQVVMLYINCKVNGYPVKAF 248

Query: 262 VDSGAQSTIISKSCAEKC 280
           VDSGAQ TI+S++CAE+C
Sbjct: 249 VDSGAQMTIMSQACAERC 263

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BLAST of CmoCh09G010440 vs. Swiss-Prot
Match: DDI1_BOVIN (Protein DDI1 homolog 1 OS=Bos taurus GN=DDI1 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.5e-26
Identity = 61/138 (44.20%), Postives = 95/138 (68.84%), Query Frame = 1 

Query: 142 NPEAFQQHIRRDSNTMAQLFQSDPELAQAIVGNNLNNLQQILRERHRQRSVLQRQQEEEM 201
           +P   +  +    + ++ L + +P LA+A++  NL +  Q+L E+ R+R++   +++E +
Sbjct: 136 SPALVRSMLLSSPHDLSLLKERNPSLAEALLSGNLESFSQVLMEQQRERAL---REQERL 195

Query: 202 ALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAF 261
            L  ADPFD+EAQ KIE  IRQ+ I+EN + A+E  PE+F +V MLY++  VNG PLKAF
Sbjct: 196 RLFSADPFDLEAQAKIEEEIRQQNIEENMSIAMEEAPESFGQVAMLYINCRVNGHPLKAF 255

Query: 262 VDSGAQSTIISKSCAEKC 280
           VDSGAQ TI+++ CAE+C
Sbjct: 256 VDSGAQMTIMNQVCAERC 270

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BLAST of CmoCh09G010440 vs. TrEMBL
Match: A0A0A0K731_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G192190 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.0e-78
Identity = 157/184 (85.33%), Postives = 166/184 (90.22%), Query Frame = 1 

Query: 105 GQESKN--------LKWDQIYLQIRSMLGTASTNNLSFNPDGSAVNPEAFQQHIRRDSNT 164
           G+E KN        +K + + + + +   +A TNNLSFNPDGSAVNPEAFQQHIRRDSNT
Sbjct: 47  GKEMKNFEKLSGLGVKDEDLIMMVSAGASSAPTNNLSFNPDGSAVNPEAFQQHIRRDSNT 106

Query: 165 MAQLFQSDPELAQAIVGNNLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 224
           MAQLFQSDPELAQAIVGN+LNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK
Sbjct: 107 MAQLFQSDPELAQAIVGNDLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 166

Query: 225 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 281
           IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA
Sbjct: 167 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 226

[Close]
BLAST of CmoCh09G010440 vs. TrEMBL
Match: A0A0B0PIL6_GOSAR (Dna damage-inducible 1 OS=Gossypium arboreum GN=F383_05539 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 6.9e-71
Identity = 162/281 (57.65%), Postives = 200/281 (71.17%), Query Frame = 1 

Query: 1   MKITVMTADEQILSLDVDPNESTQVPLQRQQLLYNGKEMKNFEKLRGLGVKDEDLIMMVS 60
           M+ITVMTADEQILSLDVDP+E+ +          N K +   E +  + ++ + L+    
Sbjct: 1   MRITVMTADEQILSLDVDPHETVE----------NLKALLEVETM--VPLQQQQLLFN-- 60

Query: 61  AGASSFSWSAGLPANTSDFISKI-IIDQPLQNEKQSPWLYLVKMAGQESKNLKWDQIYLQ 120
                     G   N S+ +S + + D  L          ++ ++G  S+ +    +Y Q
Sbjct: 61  ----------GREMNNSEKLSGLGVKDDDL----------VMMVSGVASRQIFNMDVYCQ 120

Query: 121 IRSMLGTASTNNLSFNPDGSAVNPEAFQQHIRRDSNTMAQLFQSDPELAQAIVGNNLNNL 180
                G+AS N+LS NPDGSAVNP AFQQ IR+DSN + QLFQ+DPELAQA+VGN+LN L
Sbjct: 121 CS---GSASRNDLSLNPDGSAVNPAAFQQQIRQDSNLIGQLFQTDPELAQAVVGNDLNKL 180

Query: 181 QQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPE 240
           Q+ILR RH++RS L++Q+EEE+ALL ADPFDVEAQKKIEAAIRQKGIDENWAAALE+NPE
Sbjct: 181 QEILRARHQRRSELRQQEEEELALLQADPFDVEAQKKIEAAIRQKGIDENWAAALEYNPE 240

Query: 241 AFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAEKCG 281
            FARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAE+CG
Sbjct: 241 GFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCG 244

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BLAST of CmoCh09G010440 vs. TrEMBL
Match: V4WGZ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008478mg PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.7e-69
Identity = 135/170 (79.41%), Postives = 152/170 (89.41%), Query Frame = 1 

Query: 111 LKWDQIYLQIRSMLGTASTNNLSFNPDGSAVNPEAFQQHIRRDSNTMAQLFQSDPELAQA 170
           +K + + + + +   + +TNNLSFNPDGSAVNP AFQQHIR D+N M QLFQSDPELAQ 
Sbjct: 61  VKDEDLVMMVSNAASSPATNNLSFNPDGSAVNPAAFQQHIRNDANLMTQLFQSDPELAQV 120

Query: 171 IVGNNLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKKIEAAIRQKGIDENW 230
           ++GN+LN LQ +LRER RQRS L+R+QEEEMALLYADPFDVEAQKKIEAAIRQKGIDENW
Sbjct: 121 LLGNDLNKLQDLLRERSRQRSELRRRQEEEMALLYADPFDVEAQKKIEAAIRQKGIDENW 180

Query: 231 AAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAEKCG 281
           AAALEHNPEAFARVVMLYVDMEVNG+PLKAFVDSGAQSTIISKSCAE+CG
Sbjct: 181 AAALEHNPEAFARVVMLYVDMEVNGIPLKAFVDSGAQSTIISKSCAERCG 230

[Close]
BLAST of CmoCh09G010440 vs. TrEMBL
Match: A0A067G624_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0152642mg PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.7e-69
Identity = 135/170 (79.41%), Postives = 152/170 (89.41%), Query Frame = 1 

Query: 111 LKWDQIYLQIRSMLGTASTNNLSFNPDGSAVNPEAFQQHIRRDSNTMAQLFQSDPELAQA 170
           +K + + + + +   + +TNNLSFNPDGSAVNP AFQQHIR D+N M QLFQSDPELAQ 
Sbjct: 61  VKDEDLVMMVSNAASSPATNNLSFNPDGSAVNPAAFQQHIRNDANLMTQLFQSDPELAQV 120

Query: 171 IVGNNLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKKIEAAIRQKGIDENW 230
           ++GN+LN LQ +LRER RQRS L+R+QEEEMALLYADPFDVEAQKKIEAAIRQKGIDENW
Sbjct: 121 LLGNDLNKLQDLLRERSRQRSELRRRQEEEMALLYADPFDVEAQKKIEAAIRQKGIDENW 180

Query: 231 AAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAEKCG 281
           AAALEHNPEAFARVVMLYVDMEVNG+PLKAFVDSGAQSTIISKSCAE+CG
Sbjct: 181 AAALEHNPEAFARVVMLYVDMEVNGIPLKAFVDSGAQSTIISKSCAERCG 230

[Close]
BLAST of CmoCh09G010440 vs. TrEMBL
Match: W9RCT4_9ROSA (DNA damage-inducible protein 1 OS=Morus notabilis GN=L484_023749 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.1e-68
Identity = 136/170 (80.00%), Postives = 150/170 (88.24%), Query Frame = 1 

Query: 111 LKWDQIYLQIRSMLGTASTNNLSFNPDGSAVNPEAFQQHIRRDSNTMAQLFQSDPELAQA 170
           +K D + + + +   + STN+L  NPDGSAVNPEAFQ+ IR DSN +AQL Q+DPELAQA
Sbjct: 61  VKDDDLVMMVSNAASSGSTNDLGLNPDGSAVNPEAFQRQIRNDSNLLAQLLQNDPELAQA 120

Query: 171 IVGNNLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKKIEAAIRQKGIDENW 230
           I G+NLN LQ +LRERHRQRS  +RQQEEEMALLYADPFDVEAQKKIEAAIRQKGIDENW
Sbjct: 121 IGGDNLNRLQDLLRERHRQRSEYRRQQEEEMALLYADPFDVEAQKKIEAAIRQKGIDENW 180

Query: 231 AAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAEKCG 281
           AAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAE+CG
Sbjct: 181 AAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCG 230

[Close]
BLAST of CmoCh09G010440 vs. TAIR10
Match: AT3G13235.1 (AT3G13235.1 ubiquitin family protein)

HSP 1 Score: 256.9 bits (655), Expect = 1.7e-68
Identity = 128/155 (82.58%), Postives = 141/155 (90.97%), Query Frame = 1 

Query: 126 TASTNNLSFNPDGSAVNPEAFQQHIRRDSNTMAQLFQSDPELAQAIVGNNLNNLQQILRE 185
           +A+ N+L  NPDGSA+NP AFQQHIR DSN M QLFQ+DPELAQ I G++LN LQ +LR 
Sbjct: 81  SAAGNDLGMNPDGSALNPAAFQQHIRGDSNLMGQLFQNDPELAQVISGSDLNKLQDVLRA 140

Query: 186 RHRQRSVLQRQQEEEMALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVV 245
           RHRQRSVLQRQ+EEE+ALLYADPFDVEAQ+KIEAAIRQKGIDENW AALEHNPE FARV+
Sbjct: 141 RHRQRSVLQRQKEEELALLYADPFDVEAQRKIEAAIRQKGIDENWEAALEHNPEGFARVI 200

Query: 246 MLYVDMEVNGVPLKAFVDSGAQSTIISKSCAEKCG 281
           MLYVDMEVNGVPLKAFVDSGAQSTIISKSCAE+CG
Sbjct: 201 MLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCG 235

[Close]
BLAST of CmoCh09G010440 vs. NCBI nr
Match: gi|449444008|ref|XP_004139767.1| (PREDICTED: DNA damage-inducible protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 2.9e-78
Identity = 157/184 (85.33%), Postives = 166/184 (90.22%), Query Frame = 1 

Query: 105 GQESKN--------LKWDQIYLQIRSMLGTASTNNLSFNPDGSAVNPEAFQQHIRRDSNT 164
           G+E KN        +K + + + + +   +A TNNLSFNPDGSAVNPEAFQQHIRRDSNT
Sbjct: 47  GKEMKNFEKLSGLGVKDEDLIMMVSAGASSAPTNNLSFNPDGSAVNPEAFQQHIRRDSNT 106

Query: 165 MAQLFQSDPELAQAIVGNNLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 224
           MAQLFQSDPELAQAIVGN+LNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK
Sbjct: 107 MAQLFQSDPELAQAIVGNDLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 166

Query: 225 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 281
           IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA
Sbjct: 167 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 226

[Close]
BLAST of CmoCh09G010440 vs. NCBI nr
Match: gi|778725514|ref|XP_011658951.1| (PREDICTED: DNA damage-inducible protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 2.9e-78
Identity = 157/184 (85.33%), Postives = 166/184 (90.22%), Query Frame = 1 

Query: 105 GQESKN--------LKWDQIYLQIRSMLGTASTNNLSFNPDGSAVNPEAFQQHIRRDSNT 164
           G+E KN        +K + + + + +   +A TNNLSFNPDGSAVNPEAFQQHIRRDSNT
Sbjct: 47  GKEMKNFEKLSGLGVKDEDLIMMVSAGASSAPTNNLSFNPDGSAVNPEAFQQHIRRDSNT 106

Query: 165 MAQLFQSDPELAQAIVGNNLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 224
           MAQLFQSDPELAQAIVGN+LNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK
Sbjct: 107 MAQLFQSDPELAQAIVGNDLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 166

Query: 225 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 281
           IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA
Sbjct: 167 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 226

[Close]
BLAST of CmoCh09G010440 vs. NCBI nr
Match: gi|659093932|ref|XP_008447793.1| (PREDICTED: DNA damage-inducible protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 2.9e-78
Identity = 157/184 (85.33%), Postives = 166/184 (90.22%), Query Frame = 1 

Query: 105 GQESKN--------LKWDQIYLQIRSMLGTASTNNLSFNPDGSAVNPEAFQQHIRRDSNT 164
           G+E KN        +K + + + + +   +A TNNLSFNPDGSAVNPEAFQQHIRRDSNT
Sbjct: 47  GKEMKNFEKLSGLGVKDEDLIMMVSAGASSAPTNNLSFNPDGSAVNPEAFQQHIRRDSNT 106

Query: 165 MAQLFQSDPELAQAIVGNNLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 224
           MAQLFQSDPELAQAIVGN+LNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK
Sbjct: 107 MAQLFQSDPELAQAIVGNDLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 166

Query: 225 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 281
           IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA
Sbjct: 167 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 226

[Close]
BLAST of CmoCh09G010440 vs. NCBI nr
Match: gi|659093934|ref|XP_008447794.1| (PREDICTED: DNA damage-inducible protein 1 isoform X3 [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 2.9e-78
Identity = 157/184 (85.33%), Postives = 166/184 (90.22%), Query Frame = 1 

Query: 105 GQESKN--------LKWDQIYLQIRSMLGTASTNNLSFNPDGSAVNPEAFQQHIRRDSNT 164
           G+E KN        +K + + + + +   +A TNNLSFNPDGSAVNPEAFQQHIRRDSNT
Sbjct: 47  GKEMKNFEKLSGLGVKDEDLIMMVSAGASSAPTNNLSFNPDGSAVNPEAFQQHIRRDSNT 106

Query: 165 MAQLFQSDPELAQAIVGNNLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 224
           MAQLFQSDPELAQAIVGN+LNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK
Sbjct: 107 MAQLFQSDPELAQAIVGNDLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 166

Query: 225 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 281
           IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA
Sbjct: 167 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 226

[Close]
BLAST of CmoCh09G010440 vs. NCBI nr
Match: gi|659093930|ref|XP_008447792.1| (PREDICTED: DNA damage-inducible protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 2.9e-78
Identity = 157/184 (85.33%), Postives = 166/184 (90.22%), Query Frame = 1 

Query: 105 GQESKN--------LKWDQIYLQIRSMLGTASTNNLSFNPDGSAVNPEAFQQHIRRDSNT 164
           G+E KN        +K + + + + +   +A TNNLSFNPDGSAVNPEAFQQHIRRDSNT
Sbjct: 47  GKEMKNFEKLSGLGVKDEDLIMMVSAGASSAPTNNLSFNPDGSAVNPEAFQQHIRRDSNT 106

Query: 165 MAQLFQSDPELAQAIVGNNLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 224
           MAQLFQSDPELAQAIVGN+LNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK
Sbjct: 107 MAQLFQSDPELAQAIVGNDLNNLQQILRERHRQRSVLQRQQEEEMALLYADPFDVEAQKK 166

Query: 225 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 281
           IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA
Sbjct: 167 IEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCA 226

The following BLAST results are available for this feature:
BLAST of CmoCh09G010440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DDI1_PHANO1.8e-2747.48DNA damage-inducible protein 1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-... [more]
DDI1_RAT3.9e-2744.23Protein DDI1 homolog 1 OS=Rattus norvegicus GN=Ddi1 PE=1 SV=1[more]
DDI2_XENLA8.8e-2744.20Protein DDI1 homolog 2 OS=Xenopus laevis GN=ddi2 PE=2 SV=1[more]
DDI2_XENTR1.1e-2644.20Protein DDI1 homolog 2 OS=Xenopus tropicalis GN=ddi2 PE=2 SV=1[more]
DDI1_BOVIN1.5e-2644.20Protein DDI1 homolog 1 OS=Bos taurus GN=DDI1 PE=2 SV=1[more]
BLAST of CmoCh09G010440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K731_CUCSA2.0e-7885.33Uncharacterized protein OS=Cucumis sativus GN=Csa_7G192190 PE=4 SV=1[more]
A0A0B0PIL6_GOSAR6.9e-7157.65Dna damage-inducible 1 OS=Gossypium arboreum GN=F383_05539 PE=4 SV=1[more]
V4WGZ5_9ROSI1.7e-6979.41Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008478mg PE=4 SV=1[more]
A0A067G624_CITSI1.7e-6979.41Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0152642mg PE=4 ... [more]
W9RCT4_9ROSA1.1e-6880.00DNA damage-inducible protein 1 OS=Morus notabilis GN=L484_023749 PE=4 SV=1[more]
BLAST of CmoCh09G010440 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G13235.11.7e-6882.58 ubiquitin family protein[more]
BLAST of CmoCh09G010440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444008|ref|XP_004139767.1|2.9e-7885.33PREDICTED: DNA damage-inducible protein 1 isoform X1 [Cucumis sativus][more]
gi|778725514|ref|XP_011658951.1|2.9e-7885.33PREDICTED: DNA damage-inducible protein 1 isoform X2 [Cucumis sativus][more]
gi|659093932|ref|XP_008447793.1|2.9e-7885.33PREDICTED: DNA damage-inducible protein 1 isoform X2 [Cucumis melo][more]
gi|659093934|ref|XP_008447794.1|2.9e-7885.33PREDICTED: DNA damage-inducible protein 1 isoform X3 [Cucumis melo][more]
gi|659093930|ref|XP_008447792.1|2.9e-7885.33PREDICTED: DNA damage-inducible protein 1 isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR019103Peptidase_aspartic_DDI1-type
IPR021109Peptidase_aspartic_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0043130ubiquitin binding
GO:0005515protein binding
GO:0004190aspartic-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
biological_process GO:0006508 proteolysis
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0031593 polyubiquitin binding
molecular_function GO:0005515 protein binding
molecular_function GO:0043130 ubiquitin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G010440.1CmoCh09G010440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 10..59
score: 1.
IPR000626Ubiquitin domainPROFILEPS50053UBIQUITIN_2coord: 1..59
score: 10
IPR019103Aspartic peptidase, DDI1-typePFAMPF09668Asp_proteasecoord: 224..280
score: 3.4
IPR021109Aspartic peptidase domainunknownSSF50630Acid proteasescoord: 232..280
score: 2.4
NoneNo IPR availableunknownCoilCoilcoord: 179..199
scor
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 6..60
score: 1.
NoneNo IPR availablePANTHERPTHR12917ASPARTYL PROTEASE DDI-RELATEDcoord: 1..280
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh09G010440Melon (DHL92) v3.6.1cmomedB003
CmoCh09G010440Silver-seed gourdcarcmoB0106
CmoCh09G010440Silver-seed gourdcarcmoB0586
CmoCh09G010440Cucumber (Chinese Long) v3cmocucB0040
CmoCh09G010440Watermelon (97103) v2cmowmbB035
CmoCh09G010440Wax gourdcmowgoB0021
CmoCh09G010440Cucurbita maxima (Rimu)cmacmoB436
CmoCh09G010440Cucurbita moschata (Rifu)cmocmoB018
CmoCh09G010440Cucumber (Gy14) v1cgycmoB0915
CmoCh09G010440Cucurbita maxima (Rimu)cmacmoB027
CmoCh09G010440Wild cucumber (PI 183967)cmocpiB036
CmoCh09G010440Cucumber (Chinese Long) v2cmocuB033
CmoCh09G010440Melon (DHL92) v3.5.1cmomeB004
CmoCh09G010440Watermelon (Charleston Gray)cmowcgB001
CmoCh09G010440Watermelon (97103) v1cmowmB001
CmoCh09G010440Cucurbita pepo (Zucchini)cmocpeB014
CmoCh09G010440Cucurbita pepo (Zucchini)cmocpeB021
CmoCh09G010440Cucurbita pepo (Zucchini)cmocpeB034
CmoCh09G010440Bottle gourd (USVL1VR-Ls)cmolsiB006
CmoCh09G010440Cucumber (Gy14) v2cgybcmoB870