CmoCh09G010280 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh09G010280
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr09 : 5496998 .. 5500165 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCCTTTTCCCTCTTTCTTTCCTCTTTTCCCCAATGCCTTTGACCCTTATCCAATTTACCCATTAAAACCCAACTGGGTCTTCCTCGTCGGTGGGTCTCTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTCTTCCTCGTCGGTGGGTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCTTTTGTTCTGATCTCTTTTGGGTGATGAACTGATGATGTTTATGTTTGTAGATTGCTTTCCAGGTTTAATCTGGACTGACACGGTTGAGAAGCTCGGGCGGGTGGATTTCGAGTAAGTGTTTTGATTTTGTGCACGATAGGTGTTTGATGTTTTGCCTGGCTGAGTGATCATATGGTTTTGGCTTGGAATTTTCTTGAATTGAATGGATAATTGGTGGGTTGTTTTGTTCATTCATTGTGGGAGAAAGTTCTGTGGTTTTAGCTGTCATGATTGTCAAGTTGGTGTTTGATGATTTGCCTTGCTGAGTGATCATATGGTTTTGGCTTGGGATTTTCATGAATTTGAATAGATAATTGGTGGGTTGTTTTGTTCATTCATTGTGGGTGAATGTTCTGTTGTTTTGGCTGTCATGATTGTCAAGTTGGCTCTTGAATCTCCATGAAAGCACTTCGTTTTCTATGTTTGTGCTGTCATGATTGTCAAGTTGGCTCTTGAATCTCCATGAAAGCACTTTGTTTTCTATGTTTGTGCTGAATCCAAGCTGTTTTTTTGTGTTGTACTAGATAAGGAAAGGTCGTTTTCAATGATCAATTCTGGTTATTTCATTTCGGGGCCTCCGTGTAACTACAATGGCACTGCTTCCTTTATCTCGAATTTGTCGGTGGAAGAAGATGGTGCAGGTGCAGATGTTAGAGATGACAATTCTGTTTCTCTCCCTGCATCTTTCTGGGTTAGGGTAGCAATGAGGGTGTCTAGAGCCAGGTGGTTCATTTTCTTACGAAGAGTATTTCACTACCAGAATGGATCGAGGTCAAATCTCGGGTCCGATCCTTTCAATTCTAGCTCGTGGATGGCTATGGAACTGATAGCTATGGTGTTTCAGCTGGCCATCACTGTGTTTTTTCTCGCCATTTCAGAGACAGAGAAGCCTGTTTGGCCTATGAGACTGTGGATAGTTGGTTACGATCTTGGCTGCGTTCTTAGCTTGTTGCTTCTCTACGGACGATATTGGCACGTTTATTTAATGCCGCGCGTTGGCCTTCCCGACATCGAGCAGCGGAGGAGCAGTCAAGCATCAAGGTATTCCTTAACATGCTACTTTCTCTATATTAGAGTGGATAAAGCAGCTGATGGAGGATAAACAAGGTCTACTTTCTCTCTAGTATAAGAAATTTAGAATCATTTAGAAGTTAGCTGAAAGTACAACCGAAAAATGCTGCTTTTCTTGCTCTGTTTAATTGGTGTTAGGAATCACGAACCTCCACAATGGTATGATATTGTCCACTTTGAGCATGAGCTCTTGTGACTTTGCTTTGAACTTCCCCAGAAGGCCTAATACTAAATGGAGATCTATTCCTTACTTATAAACCCATGATCGTTCCCTAAATTAGCTAACGTGGGACTCCCTCTCAACAATCCTCAACCATTGAAACCGCCTCATTTAGAATGTGGATGCACTTATCTACAACTCCTATTCAATACGATGTGCAGGAGCTTGCGCTTGATGAACAAATGTCGGTCGTCTCTTGAACTTTTCTTTGCCATATGGTTCGTAATGGGCAATGTTTGGATCGTCGATTCTCGCTTCGATTCTTTCCAAAGAGCTCCCAAGCTTCATCTGCTATGCGTCTTCCTGTTAGTTTGGAATGCCATCTGCTACTCTTTTCCATTCATACTTTTTCTTCTGCTATGTTGCTGTGTGCCATTGATTAGTAGCCTTCTCGGGTATAACATTAACATGGCATCGACCGACAAAGGCGCATCGGATGATCAAATATCCGAGCTACCTTGCTGGAGATATAAAGCAAGCTCAAAACAACCTGATAGTAACAACAAAGGACTTCCAAAGGAGGATCCAGTAAGTGAAGCATATAATATATACTTGCAATGAAGAATTTGACTGAGTTTGTTTGTTTTCTTGTGCTGTTCTTGTAGGAATGTTGCATTTGCTTAGTGAAATACAGAGATGAAGAAGAAGTAAGAGAGTTGCCTTGTTCGCATTTGTTCCATCTCAAGTGTGTAGATAAGTGGCTATCGATCACATCTTCCTGCCCTCTCTGTAAGCAACAACTTCAAAGATAAAAATCACTTCAAATTCTGTTCTTTTTTGTTCCCACACATGAATTAGTTGAATTAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATTCATAGGCCCATAAGAACAGAATTCTGCTGCTTCCACTGCTTTTAAGTTGCGAGAACTTTCTTGGATTGCAGTGTCTACATGTCTGTCTATGTGTATGTATGTATAGTATTTGTTTGTTTTACCGACACGTAGAATGGTTATCGTCCATGTTCGTGCTTGCCTGGACTTTGTTTCACTATTTTTTTTAGTTCAATAATACGTGAGATGAGATTGTTTCGTTTCAACTTGTCCTGGTTCATGTTAATCGAGAGAGAAGAAAAAAGAAAGAAGAAGAGTTAGGATATTAAAAAAAGAGGAGAAGTACGGTAGATGCCCGTGGAAGCAATGGACAGAGTAGAGATGGTTGAGAGTGTTAGGTTATGGAGTCACGTCGATACTTCCACATATTACGGGTAACGTAGGAGACATCTCTATTTTTCCTCTCAGGAATCCTTAGAATTACTACCGCTTCGCTTTCAATTTGCCTCTGACTATTAAATGAAATGTGAATAACTCGTCCTCCTCTCTTTGAAACAAG

mRNA sequence

ATGTCCCCTTTTCCCTCTTTCTTTCCTCTTTTCCCCAATGCCTTTGACCCTTATCCAATTTACCCATTAAAACCCAACTGGGTCTTCCTCGTCGGTGGCTCGGGCGGGTGGATTTCGAATAAGGAAAGGTCGTTTTCAATGATCAATTCTGGTTATTTCATTTCGGGGCCTCCGTGTAACTACAATGGCACTGCTTCCTTTATCTCGAATTTGTCGGTGGAAGAAGATGGTGCAGGTGCAGATGTTAGAGATGACAATTCTGTTTCTCTCCCTGCATCTTTCTGGGTTAGGGTAGCAATGAGGGTGTCTAGAGCCAGGTGGTTCATTTTCTTACGAAGAGTATTTCACTACCAGAATGGATCGAGGTCAAATCTCGGGTCCGATCCTTTCAATTCTAGCTCGTGGATGGCTATGGAACTGATAGCTATGGTGTTTCAGCTGGCCATCACTGTGTTTTTTCTCGCCATTTCAGAGACAGAGAAGCCTGTTTGGCCTATGAGACTGTGGATAGTTGGTTACGATCTTGGCTGCGTTCTTAGCTTGTTGCTTCTCTACGGACGATATTGGCACGTTTATTTAATGCCGCGCGTTGGCCTTCCCGACATCGAGCAGCGGAGGAGCAGTCAAGCATCAAGGAGCTTGCGCTTGATGAACAAATGTCGGTCGTCTCTTGAACTTTTCTTTGCCATATGGTTCGTAATGGGCAATGTTTGGATCGTCGATTCTCGCTTCGATTCTTTCCAAAGAGCTCCCAAGCTTCATCTGCTATGCGTCTTCCTGTTAGTTTGGAATGCCATCTGCTACTCTTTTCCATTCATACTTTTTCTTCTGCTATGTTGCTGTGTGCCATTGATTAGTAGCCTTCTCGGGTATAACATTAACATGGCATCGACCGACAAAGGCGCATCGGATGATCAAATATCCGAGCTACCTTGCTGGAGATATAAAGCAAGCTCAAAACAACCTGATAGTAACAACAAAGGACTTCCAAAGGAGGATCCAGAATGTTGCATTTGCTTAGTGAAATACAGAGATGAAGAAGAAGTAAGAGAGTTGCCTTGTTCGCATTTGTTCCATCTCAAGTGTGTAGATAAGTGGCTATCGATCACATCTTCCTGCCCTCTCTGTAAGCAACAACTTCAAAGATAAAAATCACTTCAAATTCTGTTCTTTTTTGTTCCCACACATGAATTAGTTGAATTAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATTCATAGGCCCATAAGAACAGAATTCTGCTGCTTCCACTGCTTTTAAGTTGCGAGAACTTTCTTGGATTGCAGTGTCTACATGTCTGTCTATGTGTATGTATGTATAGTATTTGTTTGTTTTACCGACACGTAGAATGGTTATCGTCCATGTTCGTGCTTGCCTGGACTTTGTTTCACTATTTTTTTTAGTTCAATAATACGTGAGATGAGATTGTTTCGTTTCAACTTGTCCTGGTTCATGTTAATCGAGAGAGAAGAAAAAAGAAAGAAGAAGAGTTAGGATATTAAAAAAAGAGGAGAAGTACGGTAGATGCCCGTGGAAGCAATGGACAGAGTAGAGATGGTTGAGAGTGTTAGGTTATGGAGTCACGTCGATACTTCCACATATTACGGGTAACGTAGGAGACATCTCTATTTTTCCTCTCAGGAATCCTTAGAATTACTACCGCTTCGCTTTCAATTTGCCTCTGACTATTAAATGAAATGTGAATAACTCGTCCTCCTCTCTTTGAAACAAG

Coding sequence (CDS)

ATGTCCCCTTTTCCCTCTTTCTTTCCTCTTTTCCCCAATGCCTTTGACCCTTATCCAATTTACCCATTAAAACCCAACTGGGTCTTCCTCGTCGGTGGCTCGGGCGGGTGGATTTCGAATAAGGAAAGGTCGTTTTCAATGATCAATTCTGGTTATTTCATTTCGGGGCCTCCGTGTAACTACAATGGCACTGCTTCCTTTATCTCGAATTTGTCGGTGGAAGAAGATGGTGCAGGTGCAGATGTTAGAGATGACAATTCTGTTTCTCTCCCTGCATCTTTCTGGGTTAGGGTAGCAATGAGGGTGTCTAGAGCCAGGTGGTTCATTTTCTTACGAAGAGTATTTCACTACCAGAATGGATCGAGGTCAAATCTCGGGTCCGATCCTTTCAATTCTAGCTCGTGGATGGCTATGGAACTGATAGCTATGGTGTTTCAGCTGGCCATCACTGTGTTTTTTCTCGCCATTTCAGAGACAGAGAAGCCTGTTTGGCCTATGAGACTGTGGATAGTTGGTTACGATCTTGGCTGCGTTCTTAGCTTGTTGCTTCTCTACGGACGATATTGGCACGTTTATTTAATGCCGCGCGTTGGCCTTCCCGACATCGAGCAGCGGAGGAGCAGTCAAGCATCAAGGAGCTTGCGCTTGATGAACAAATGTCGGTCGTCTCTTGAACTTTTCTTTGCCATATGGTTCGTAATGGGCAATGTTTGGATCGTCGATTCTCGCTTCGATTCTTTCCAAAGAGCTCCCAAGCTTCATCTGCTATGCGTCTTCCTGTTAGTTTGGAATGCCATCTGCTACTCTTTTCCATTCATACTTTTTCTTCTGCTATGTTGCTGTGTGCCATTGATTAGTAGCCTTCTCGGGTATAACATTAACATGGCATCGACCGACAAAGGCGCATCGGATGATCAAATATCCGAGCTACCTTGCTGGAGATATAAAGCAAGCTCAAAACAACCTGATAGTAACAACAAAGGACTTCCAAAGGAGGATCCAGAATGTTGCATTTGCTTAGTGAAATACAGAGATGAAGAAGAAGTAAGAGAGTTGCCTTGTTCGCATTTGTTCCATCTCAAGTGTGTAGATAAGTGGCTATCGATCACATCTTCCTGCCCTCTCTGTAAGCAACAACTTCAAAGATAA

Homology

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BLAST of CmoCh09G010280 vs. Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.5e-27
Identity = 82/269 (30.48%), Postives = 127/269 (47.21%), Query Frame = 1


Query: 147 LAITVFFLAISETEKPVWPMRLWIVGYDLGCVLSLLLLYGRY-----------------W 206
           +AI V  L +S  EKP  P+R+W+VGY + C L +  +   Y                  
Sbjct: 121 VAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLT 180

Query: 207 HVYLMPRVGLPDIEQR-RSSQASRSLRLMNKCRSSLELFFAIWFVMGNVWIVDSRFDSFQ 266
           +      V L  +E R  +S  ++ L   N       +F  IW+++G  W+         
Sbjct: 181 NSSSQQYVSLAQLEDRGETSNPAKHLESANT------MFSFIWWIIGFYWVSAGGQTLSS 240

Query: 267 RAPKLHLLCVFLLVWNAI----CYSFPFILFLLLCCCVPLISSLLGYNINMASTDKGASD 326
            +P+L+ LC+  L ++      C +   ++ L +CCC+P I ++L Y +   +  +GAS 
Sbjct: 241 DSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV---ADQEGASK 300

Query: 327 DQISELPCWRYKASSKQPDSNNKG----------------LPKEDPECCICLVKYRDEEE 378
           + I ++P +R+  +      + K                 L  ED ECCICL +Y D  E
Sbjct: 301 NDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVE 360

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BLAST of CmoCh09G010280 vs. Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 1.3e-26
Identity = 88/301 (29.24%), Postives = 140/301 (46.51%), Query Frame = 1


Query: 140 LIAMVFQLAITVF---FLAISETEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHVYLMPR 199
           ++  V+ LA  V     L +S  E P  P+R+WI+GY L C++ ++ +   Y       R
Sbjct: 76  VLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRR 135

Query: 200 VGLPDIEQRRSSQASRSLRLMNK------CRSSLELFFA--------------------- 259
               D+  R SS +S S   M++       R+S E +                       
Sbjct: 136 ---RDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTM 195

Query: 260 ---IWFVMGNVWIVDSRFDSFQRAPKLHLLCVFLLVWNAI----CYSFPFILFLLLCCCV 319
              IW+V+G  W+     +  Q +P+L+ LC+  L ++      C +   ++ + +CCC+
Sbjct: 196 ISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCL 255

Query: 320 PLISSLLGYNINMASTDKGASDDQISELPCWRYK---------ASSKQPDSNNKG----- 379
           P I ++L Y +   +  +GAS + I +L  ++++            +Q   ++ G     
Sbjct: 256 PCIIAVL-YAV---AEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTEC 315

Query: 380 ---------LPKEDPECCICLVKYRDEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQ 381
                    LP ED ECCICL  Y DE E+RELPC H FH  CVDKWL I ++CPLCK  
Sbjct: 316 GTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYN 369

[Close]

BLAST of CmoCh09G010280 vs. Swiss-Prot
Match: RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.3e-25
Identity = 81/281 (28.83%), Postives = 128/281 (45.55%), Query Frame = 1


Query: 135 WMAMELIAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHVYLM 194
           W A  ++A    L  TV        E+P  P+R+WI  Y L C+  ++L++  YW     
Sbjct: 84  WNAALVLASAVMLVGTV-------EERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNST 143

Query: 195 PRVGLPDIE-------------QRRSSQASRSLRLMNKCRSSLELFFAIWFVMGNVWIVD 254
            R    D+E             ++ S   S +   + +C S   +   IW+++G  W+V+
Sbjct: 144 RRAR--DLESYDHEDYNIEYDYEQDSDDNSTTYSFVKRCESINTVISFIWWIIGFYWVVE 203

Query: 255 SRFDSFQRAPKLHLLCVFLLV----WNAICYSFPFILFLLLCCCVPLISSLLGYNINMAS 314
                   AP L+ L V  L     +   C     ++ + LCCC+P I +LL     +A 
Sbjct: 204 GGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALL---YAVAG 263

Query: 315 TDKGASDDQISELPCWRYKA---SSKQPDSNNKGLP---------------KEDPECCIC 374
           T+ G S+ ++  LP +++KA   + K      K +P                ED +CCIC
Sbjct: 264 TE-GVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDADCCIC 323

Query: 375 LVKYRDEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQL 381
           L  Y D  E+  LPC+H FH  C+ KWL + ++CPLCK  +
Sbjct: 324 LSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351

[Close]

BLAST of CmoCh09G010280 vs. Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.7e-24
Identity = 82/310 (26.45%), Postives = 140/310 (45.16%), Query Frame = 1


Query: 127 SDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCVLSLLLL-- 186
           SD   S   + ++++  +  +++    L +S  E P+ P+R+W++GY L CVL ++ +  
Sbjct: 92  SDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCV 151

Query: 187 -YGRYWHVYLMPRVGLPDIEQRRSSQASRSLRLMNKCRSS-------------------- 246
            Y R                 R SS +S S  L  +   S                    
Sbjct: 152 EYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSS 211

Query: 247 ----LE----LFFAIWFVMGNVWIVDSRFDSFQRAPKLHLLCVFLLVWN----AICYSFP 306
               LE    +F  IW+++G  W+     +  Q +P+++ L +  L ++      C +  
Sbjct: 212 VAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALA 271

Query: 307 FILFLLLCCCVPLISSLLGYNINMASTDKGASDDQISELPCWRYKA---SSKQPDSNNKG 366
            ++ + +CCC+P I ++L       +  +GAS + I +L  ++++    ++K  +   +G
Sbjct: 272 CVIGIAVCCCLPCIIAVL----YAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQG 331

Query: 367 ------------------LPKEDPECCICLVKYRDEEEVRELPCSHLFHLKCVDKWLSIT 381
                             L +ED ECCICL  Y D  E+RELPC H FH  CVDKWL I 
Sbjct: 332 TTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYIN 391

[Close]

BLAST of CmoCh09G010280 vs. Swiss-Prot
Match: ATL37_ARATH (Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana GN=ATL37 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.0e-10
Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = 1


Query: 255 LLCVFLLVWNAICYSFPFILFLLLCCCVPLISSLLGYNINMASTDKGASDDQISELPCWR 314
           LL +FLL+    C ++         CC+   +   G+ +  +   +G   D I   P + 
Sbjct: 54  LLSLFLLLLVVYCLNYG--------CCIEE-NETGGHEVLHSRVRRGIDKDVIESFPAFL 113

Query: 315 YKASSKQPDSNNKGLPKEDPECCICLVKYRDEEEVRELP-CSHLFHLKCVDKWLSITSSC 374
           Y +  K     N G+     EC ICL ++ DEE +R +P CSH FH  C+D+WLS  S+C
Sbjct: 114 Y-SEVKAFKIGNGGV-----ECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTC 165

Query: 375 PLCKQQL 381
           P+C+  L
Sbjct: 174 PVCRANL 165

[Close]

BLAST of CmoCh09G010280 vs. TrEMBL
Match: A0A0A0K7S5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278220 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 3.9e-166
Identity = 289/337 (85.76%), Postives = 308/337 (91.39%), Query Frame = 1


Query: 47  MINSGYFISGPPCNYNG-TASFISNLSVEEDGAGADVRDDNSVSLPASFWVRVAMRVSRA 106
           MINS YF+SG  CN  G T+ FI N  +EED    DVRDDNSV+LPASFWVR+AMRVSRA
Sbjct: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60

Query: 107 RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWP 166
           RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMA+EL+AMVFQL+ITVF LAISE EKP+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120

Query: 167 MRLWIVGYDLGCVLSLLLLYGRYWHVYLM--PRVGLPDIEQRRSSQASRSLRLMNKCRSS 226
           MRLWIVGYDLGC+LSLLLLYGRYWH+YLM   RVGL D EQRR+SQASRSL LMNKCR+S
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASRSLHLMNKCRTS 180

Query: 227 LELFFAIWFVMGNVWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 286
           LELFFAIWFVMGNVWIVDSRF SFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP
Sbjct: 181 LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 240

Query: 287 LISSLLGYNINMASTDKGASDDQISELPCWRYKASSKQPDSNNKGLPKEDPECCICLVKY 346
           L+SSLLGYNI+MASTDK A DDQIS+LPCWRYK SS QPDS N+GLPKEDPECCICLVKY
Sbjct: 241 LVSSLLGYNISMASTDKAALDDQISQLPCWRYKVSSMQPDS-NEGLPKEDPECCICLVKY 300

Query: 347 RDEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQL 381
           RDEEEVR+LPCSH FHL+CVDKWLSITSSCPLCKQQL
Sbjct: 301 RDEEEVRQLPCSHFFHLRCVDKWLSITSSCPLCKQQL 336

[Close]

BLAST of CmoCh09G010280 vs. TrEMBL
Match: A0A0A0K4H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278230 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 4.3e-141
Identity = 253/347 (72.91%), Postives = 292/347 (84.15%), Query Frame = 1


Query: 47  MINSGYFISGPPCNYNGTASFISNLSVEEDGAGAD-VRDDNSVSLPASFWVRVAMRVSRA 106
           MI+SG+F+SGP  N + T SFIS    EEDGA AD +R++ S S+P SFWV++AM++SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSEEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 107 RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWP 166
           RWFIFLRRVFHYQNGSRS+LG +PFNS SWMAMEL+A++FQL I+ F LAIS+ EKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWP 120

Query: 167 MRLWIVGYDLGCVLSLLLLYGRYWHVYLMPRVG--LPDIE--QRRSSQASRSLRLMNKCR 226
           MRLWI GYDLGCVLSLLLLYGR+ + YLM R G  L DIE  Q+R++++SR   LMN+CR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIEHEQQRTNESSRYSHLMNRCR 180

Query: 227 SSLELFFAIWFVMGNVWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCC 286
           +SL+LFFAIWFVMGN+W  DSR  SFQRAPKLHLLC FLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 287 VPLISSLLGYNINMASTDKGASDDQISELPCWRYKA------SSKQPDSNNKGLPKEDPE 346
           VPLISSL GYNIN  ST+KGASDDQIS+LPCWRYKA         Q D++N GL KEDPE
Sbjct: 241 VPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLLKEDPE 300

Query: 347 CCICLVKYRDEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQLQR 383
           CCICL KY D+EEVR+LPCSH+FHL+CVDKWL+ITSSCPLCKQQLQR
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 347

[Close]

BLAST of CmoCh09G010280 vs. TrEMBL
Match: A0A0B0PCR8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_06014 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 1.8e-126
Identity = 217/327 (66.36%), Postives = 263/327 (80.43%), Query Frame = 1


Query: 59  CNYNGTASFISNLSVEEDGAGADVRDDNSVSLPASFWVRVAMRVSRARWFIFLRRVFHYQ 118
           CN +  A F SN + EEDG  A  R  +  +  +S  +R+ MR+SRARWF FLRRVFHYQ
Sbjct: 13  CNSSTAAPFSSNPTGEEDGVAAGSRSRSPRAASSSILIRMVMRMSRARWFTFLRRVFHYQ 72

Query: 119 NGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCV 178
           NGSRS+LGS+PFNSS+WM +E +A+V Q+++  F LAI++ EKPVWPMR+WIVGYD+GC 
Sbjct: 73  NGSRSDLGSNPFNSSTWMMLEFLALVIQISVITFTLAIAKKEKPVWPMRIWIVGYDIGCA 132

Query: 179 LSLLLLYGRYWHVYLMPR--VGLPDIEQRRSSQASRSLRLMNKCRSSLELFFAIWFVMGN 238
           LSLLLLYGRY H+++      GL D+EQ+R+++ SRS  LMNKCR+SLELFFAIWFVMGN
Sbjct: 133 LSLLLLYGRYHHLHITQGDGFGLADVEQQRTNEESRSTHLMNKCRTSLELFFAIWFVMGN 192

Query: 239 VWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLISSLLGYNINMA 298
           VW+ DSRF SFQRAP LH+LC+ LL WNA+CYSFPF+LFLLLCCCVPLISSLLGYN+NM 
Sbjct: 193 VWVFDSRFGSFQRAPNLHVLCISLLAWNALCYSFPFLLFLLLCCCVPLISSLLGYNMNMG 252

Query: 299 STDKGASDDQISELPCWRYKASSKQPD-SNNKGLPKEDPECCICLVKYRDEEEVRELPCS 358
           STD+GASDDQIS LP WRYK  S   +  +N     EDPECCICL KY+D+EEVR+LPCS
Sbjct: 253 STDRGASDDQISGLPSWRYKEISTNSELDHNSDHTNEDPECCICLAKYKDKEEVRQLPCS 312

Query: 359 HLFHLKCVDKWLSITSSCPLCKQQLQR 383
           H+FHLKCVD+WL I S CPLCKQ+L+R
Sbjct: 313 HMFHLKCVDQWLRIISCCPLCKQELER 339

[Close]

BLAST of CmoCh09G010280 vs. TrEMBL
Match: A0A061F5I6_THECC (RING/U-box domain-containing protein isoform 2 OS=Theobroma cacao GN=TCM_030584 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 9.6e-125
Identity = 218/331 (65.86%), Postives = 264/331 (79.76%), Query Frame = 1


Query: 59  CNYNGTASFISNLSVEEDGAGADVRDDNSVSLPASFWVRVAMRVSRARWFIFLRRVFHYQ 118
           CN +   S+ SN    ED   A  R+ +  + P+S  +R+AMR+SRARWF FLRRVFHYQ
Sbjct: 13  CNSSTAVSYSSNPPGGEDRMAAGARNRSPRAPPSSLLIRMAMRISRARWFTFLRRVFHYQ 72

Query: 119 NGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCV 178
           NGSRS+LGS+PFNSS+WM +E +A+V Q++IT F LAIS+ E+PVWPMR+WIVGYD+GC+
Sbjct: 73  NGSRSDLGSNPFNSSTWMMLEFLALVIQISITTFTLAISKKERPVWPMRIWIVGYDIGCL 132

Query: 179 LSLLLLYGRYWHVYLMPR--VGLPDIEQRRSSQASRSLRLMNKCRSSLELFFAIWFVMGN 238
           LSLLLLYGRY H+Y+      GL D+EQ+R+++ SRS  LMNKCR+SLELFFAIWFVMGN
Sbjct: 133 LSLLLLYGRYHHLYITQGDGFGLSDVEQQRANEESRSSHLMNKCRTSLELFFAIWFVMGN 192

Query: 239 VWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLISSLLGYNINMA 298
           VW+ DSRF SF RAP LH+LC+ LL WNA+ YSFPF+LFLLLCCCVPLISSLLGYN+NM 
Sbjct: 193 VWVFDSRFGSFHRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSLLGYNMNMG 252

Query: 299 STDKGASDDQISELPCWRYKASSK----QPDSN-NKGLPKEDPECCICLVKYRDEEEVRE 358
           S D+GASDDQIS LP WRYK  +       DS+ N  L  EDPECCICL KY+D+EEVR+
Sbjct: 253 SNDRGASDDQISRLPSWRYKEINTNLELDHDSDCNASLANEDPECCICLAKYKDKEEVRQ 312

Query: 359 LPCSHLFHLKCVDKWLSITSSCPLCKQQLQR 383
           LPCSH+FHLKCVD+WL I S CPLCKQ+L+R
Sbjct: 313 LPCSHIFHLKCVDQWLRIISCCPLCKQELER 343

[Close]

BLAST of CmoCh09G010280 vs. TrEMBL
Match: A0A0D2R3G4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G102600 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.1e-124
Identity = 214/327 (65.44%), Postives = 260/327 (79.51%), Query Frame = 1


Query: 59  CNYNGTASFISNLSVEEDGAGADVRDDNSVSLPASFWVRVAMRVSRARWFIFLRRVFHYQ 118
           CN +    F SN + EED   A  R+ +  +  +S  +R+ MR+SRARWF FLRRVFHYQ
Sbjct: 13  CNSSTAVPFSSNPTGEEDRVAAGSRNRSPRAASSSILIRMVMRMSRARWFTFLRRVFHYQ 72

Query: 119 NGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCV 178
           NGSRS+LGS+PFNSS+WM +E + +V Q++I  F LAI++ EKPVWPMR+WIVGYD+GC 
Sbjct: 73  NGSRSDLGSNPFNSSTWMMLEFLILVIQISIITFTLAIAKKEKPVWPMRIWIVGYDIGCA 132

Query: 179 LSLLLLYGRYWHVYLMPR--VGLPDIEQRRSSQASRSLRLMNKCRSSLELFFAIWFVMGN 238
           LSLLLLYGRY H+++      GL D+EQ+R+++ SRS  LMNKCR+SLELFFAIWFVMGN
Sbjct: 133 LSLLLLYGRYHHLHITQGDGFGLADVEQQRTNEESRSTHLMNKCRTSLELFFAIWFVMGN 192

Query: 239 VWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLISSLLGYNINMA 298
           VW+ DSRF SF RAP LH+LC+ LL WNA+CYSFPF+LFLLLCCCVPLISSLLGYN+NM 
Sbjct: 193 VWVFDSRFGSFHRAPNLHVLCISLLAWNALCYSFPFLLFLLLCCCVPLISSLLGYNMNMG 252

Query: 299 STDKGASDDQISELPCWRYKASSKQPD-SNNKGLPKEDPECCICLVKYRDEEEVRELPCS 358
           STD+GASDDQIS LP WRYK  S   +  +N     EDPECCICL KY+D+EEVR+LPCS
Sbjct: 253 STDRGASDDQISRLPSWRYKEISTNSELDHNSDHTNEDPECCICLAKYKDKEEVRQLPCS 312

Query: 359 HLFHLKCVDKWLSITSSCPLCKQQLQR 383
           H+FHLKCVD+WL I S CPLCKQ+L+R
Sbjct: 313 HMFHLKCVDQWLRIISCCPLCKQELER 339

[Close]

BLAST of CmoCh09G010280 vs. TAIR10
Match: AT5G55970.1 (AT5G55970.1 RING/U-box superfamily protein)

HSP 1 Score: 411.8 bits (1057), Expect = 4.7e-115
Identity = 196/297 (65.99%), Postives = 238/297 (80.13%), Query Frame = 1


Query: 91  PASFWVRVAMRVSRARWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELIAMVFQLAIT 150
           P+SF++R+AM+VSRARWFIFLRRVFHYQNGSRS+LGS+PFNSS+WM  ELIA++ QL + 
Sbjct: 47  PSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVI 106

Query: 151 VFFLAISETEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHVYLMPRVG--LPDIEQR-RS 210
            F LAIS+ E+P+WP+RLWI GYD+GC+L+L+LLYGRY  + +    G  L D+EQ+ R 
Sbjct: 107 TFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQRG 166

Query: 211 SQASRSLRLMNKCRSSLELFFAIWFVMGNVWIVDSRFDSFQRAPKLHLLCVFLLVWNAIC 270
            + +RS  LMNKCR+SLELFFAIWFV+GNVW+ DSRF SF  APKLH+LCV LL WNAIC
Sbjct: 167 REETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAIC 226

Query: 271 YSFPFILFLLLCCCVPLISSLLGYNINMASTDKGASDDQISELPCWRYKA--SSKQPDSN 330
           YSFPF+LFL LCC VPLISSLLGYN+NM S+D+ ASDDQIS LP W++K    S     +
Sbjct: 227 YSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDS 286

Query: 331 NKGLPKEDPECCICLVKYRDEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQLQR 383
           +     +DPECCICL KY+D+EEVR+LPCSH FH KCVD+WL I S CPLCKQ L R
Sbjct: 287 DSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLPR 343

[Close]

BLAST of CmoCh09G010280 vs. TAIR10
Match: AT4G26580.1 (AT4G26580.1 RING/U-box superfamily protein)

HSP 1 Score: 396.4 bits (1017), Expect = 2.1e-110
Identity = 194/326 (59.51%), Postives = 247/326 (75.77%), Query Frame = 1


Query: 65  ASFISNLSVEEDGAGADVR-DDNSVSLP-----ASFWVRVAMRVSRARWFIFLRRVFHYQ 124
           +S I++++V    + A  + DDN+ + P     +SF++R+AMRVSRARWFIFLRRVFHYQ
Sbjct: 11  SSAINSITVSSSSSFASTQLDDNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVFHYQ 70

Query: 125 NGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCV 184
           N SRS+LG++PFNS +WM  ELIA++ Q+ +    LA+S+ E+PVWPMRLWI GY++GC+
Sbjct: 71  NASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCL 130

Query: 185 LSLLLLYGRYWHVYLMPR--VGLPDIEQRRSS--QASRSLRLMNKCRSSLELFFAIWFVM 244
           L+L+LLYGRY              DIEQ++ S  + +R   LMNKCR+SLELFFAIWFV+
Sbjct: 131 LNLMLLYGRYRQQDTSHENAFSFGDIEQQQRSREETTRCSHLMNKCRTSLELFFAIWFVI 190

Query: 245 GNVWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLISSLLGYNIN 304
           GNVW+ DSRF SF  AP LH+LC+ LL WNA+CYSFPF+LFLLLCC VPL+SS LGYN+N
Sbjct: 191 GNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGYNMN 250

Query: 305 MASTDKGASDDQISELPCWRYKASSKQPDSNNKGLPKEDPECCICLVKYRDEEEVRELPC 364
           + S++KGASDDQIS LP W+YK   +  DS+       DPECCICL KY+++EEVR+LPC
Sbjct: 251 VGSSEKGASDDQISSLPSWKYKLIDETSDSSQAN---NDPECCICLAKYKEKEEVRKLPC 310

Query: 365 SHLFHLKCVDKWLSITSSCPLCKQQL 381
           SH FHLKCVD+WL I S CPLCKQ L
Sbjct: 311 SHRFHLKCVDQWLRIISCCPLCKQDL 333

[Close]

BLAST of CmoCh09G010280 vs. TAIR10
Match: AT4G32600.1 (AT4G32600.1 RING/U-box superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 5.9e-41
Identity = 105/304 (34.54%), Postives = 148/304 (48.68%), Query Frame = 1


Query: 129 PFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCVLSLLLLYGRY 188
           P NS  W+++EL   V Q+   +  L++S+ E P  P+  WIVGY  GCV +L LLY RY
Sbjct: 106 PLNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRY 165

Query: 189 WH-------------VYLMPRVGLPDIEQRRSSQA---------SRSLRLMNKCRSSLEL 248
           +H               L    G       R+S+A         SR  R      ++   
Sbjct: 166 YHSNQASEQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARLK 225

Query: 249 FFAIWFVM------------GNVWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFIL 308
               +F M            GNVWI      S   AP L+ LC+  L ++ I Y+ PFIL
Sbjct: 226 VIVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAAEAPNLYRLCLVFLTFSCIGYAMPFIL 285

Query: 309 FLLLCCCVPLISSLLGYNINMASTDKGASDDQISELPCWRYKASSKQPD----------- 368
              +CCC+P I S+LGY  ++ +  +GA+ + I+ LP  ++K    + +           
Sbjct: 286 CTTICCCLPCIISILGYREDL-TQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEG 345

Query: 369 -------SNNKGLPKEDPECCICLVKYRDEEEVRELPCSHLFHLKCVDKWLSITSSCPLC 381
                   N + +  ED  CCICL KY + EE+RELPCSH FH +CVDKWL I +SCPLC
Sbjct: 346 GVVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLC 405

[Close]

BLAST of CmoCh09G010280 vs. TAIR10
Match: AT1G80400.1 (AT1G80400.1 RING/U-box superfamily protein)

HSP 1 Score: 159.5 bits (402), Expect = 4.2e-39
Identity = 79/195 (40.51%), Postives = 120/195 (61.54%), Query Frame = 1


Query: 206 RSSQASRSLR-----LMNKCRSSLELFFAIWFVMGNVWIVDSRFDSFQRAPKLHLLCVFL 265
           R++Q   SLR     L++  + +++ FFA+WFV+GNVWI      S   +PKL+ LC+  
Sbjct: 207 RNNQVGESLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIFGGH-SSPSDSPKLYRLCIAF 266

Query: 266 LVWNAICYSFPFILFLLLCCCVPLISSLLGYNINMASTDKGASDDQISELPCWRYKASSK 325
           L ++ I Y+ PFIL   +CCC+P + S+LG+  N + T +GA+ + I+ LP +R+K+ S+
Sbjct: 267 LTFSCIGYAMPFILCATICCCLPCLISVLGFRENFSQT-RGATAEAINALPVYRFKSKSR 326

Query: 326 QP---------------DSNNKGLPKEDPECCICLVKYRDEEEVRELPCSHLFHLKCVDK 381
                                + +  ED  CCICL +Y D+E+VRELPCSH+FH+ CVDK
Sbjct: 327 NDLEFSEEGEGGFLLLGSQKKRLISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDK 386

[Close]

BLAST of CmoCh09G010280 vs. TAIR10
Match: AT4G11680.1 (AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-28
Identity = 82/269 (30.48%), Postives = 127/269 (47.21%), Query Frame = 1


Query: 147 LAITVFFLAISETEKPVWPMRLWIVGYDLGCVLSLLLLYGRY-----------------W 206
           +AI V  L +S  EKP  P+R+W+VGY + C L +  +   Y                  
Sbjct: 121 VAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLT 180

Query: 207 HVYLMPRVGLPDIEQR-RSSQASRSLRLMNKCRSSLELFFAIWFVMGNVWIVDSRFDSFQ 266
           +      V L  +E R  +S  ++ L   N       +F  IW+++G  W+         
Sbjct: 181 NSSSQQYVSLAQLEDRGETSNPAKHLESANT------MFSFIWWIIGFYWVSAGGQTLSS 240

Query: 267 RAPKLHLLCVFLLVWNAI----CYSFPFILFLLLCCCVPLISSLLGYNINMASTDKGASD 326
            +P+L+ LC+  L ++      C +   ++ L +CCC+P I ++L Y +   +  +GAS 
Sbjct: 241 DSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV---ADQEGASK 300

Query: 327 DQISELPCWRYKASSKQPDSNNKG----------------LPKEDPECCICLVKYRDEEE 378
           + I ++P +R+  +      + K                 L  ED ECCICL +Y D  E
Sbjct: 301 NDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVE 360

[Close]

BLAST of CmoCh09G010280 vs. NCBI nr
Match: gi|659126137|ref|XP_008463028.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis melo])

HSP 1 Score: 595.5 bits (1534), Expect = 6.5e-167
Identity = 291/339 (85.84%), Postives = 307/339 (90.56%), Query Frame = 1


Query: 47  MINSGYFISGPPCNYN-GTASFISNLSVEEDGAGADVRDDNSVSLPASFWVRVAMRVSRA 106
           M+NS YF+SG  CN   GT+ F  N  VEEDGAG DVRDDNSV+L ASFWVR+AMRVSRA
Sbjct: 1   MVNSVYFVSGSSCNCGAGTSLFTPNSLVEEDGAGVDVRDDNSVALSASFWVRLAMRVSRA 60

Query: 107 RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWP 166
           RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMEL+AMV QL ITVF LAISE EKP+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELVAMVVQLVITVFVLAISEAEKPIWP 120

Query: 167 MRLWIVGYDLGCVLSLLLLYGRYWHVYLM--PRVGLPDIEQRRSSQASRSLRLMNKCRSS 226
           MRLWIVGYDLGC+LSLLLLYGRYWH+YLM   RVGL D EQ+RSSQASR LRLMNKCR+S
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQQRSSQASRCLRLMNKCRTS 180

Query: 227 LELFFAIWFVMGNVWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 286
           LELFFAIWFVMGNVWIVDSRF SFQRAPKLHLLCVFLLVWNA CYSFPFILFLLLCCCVP
Sbjct: 181 LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNATCYSFPFILFLLLCCCVP 240

Query: 287 LISSLLGYNINMASTDKGASDDQISELPCWRYKASSKQPDSNNKGLPKEDPECCICLVKY 346
           L+S LLGYNI+MASTDKGA DDQIS+LPCWRYK SS QPDS NK LPKEDPECCICLVKY
Sbjct: 241 LVSRLLGYNISMASTDKGALDDQISQLPCWRYKVSSMQPDS-NKRLPKEDPECCICLVKY 300

Query: 347 RDEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQLQR 383
           RDEEEVR+LPCSH FHLKCVDKWLSITSSCPLCKQQLQ+
Sbjct: 301 RDEEEVRQLPCSHFFHLKCVDKWLSITSSCPLCKQQLQK 338

[Close]

BLAST of CmoCh09G010280 vs. NCBI nr
Match: gi|449463394|ref|XP_004149419.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis sativus])

HSP 1 Score: 592.4 bits (1526), Expect = 5.5e-166
Identity = 289/337 (85.76%), Postives = 308/337 (91.39%), Query Frame = 1


Query: 47  MINSGYFISGPPCNYNG-TASFISNLSVEEDGAGADVRDDNSVSLPASFWVRVAMRVSRA 106
           MINS YF+SG  CN  G T+ FI N  +EED    DVRDDNSV+LPASFWVR+AMRVSRA
Sbjct: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60

Query: 107 RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWP 166
           RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMA+EL+AMVFQL+ITVF LAISE EKP+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120

Query: 167 MRLWIVGYDLGCVLSLLLLYGRYWHVYLM--PRVGLPDIEQRRSSQASRSLRLMNKCRSS 226
           MRLWIVGYDLGC+LSLLLLYGRYWH+YLM   RVGL D EQRR+SQASRSL LMNKCR+S
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASRSLHLMNKCRTS 180

Query: 227 LELFFAIWFVMGNVWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 286
           LELFFAIWFVMGNVWIVDSRF SFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP
Sbjct: 181 LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 240

Query: 287 LISSLLGYNINMASTDKGASDDQISELPCWRYKASSKQPDSNNKGLPKEDPECCICLVKY 346
           L+SSLLGYNI+MASTDK A DDQIS+LPCWRYK SS QPDS N+GLPKEDPECCICLVKY
Sbjct: 241 LVSSLLGYNISMASTDKAALDDQISQLPCWRYKVSSMQPDS-NEGLPKEDPECCICLVKY 300

Query: 347 RDEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQL 381
           RDEEEVR+LPCSH FHL+CVDKWLSITSSCPLCKQQL
Sbjct: 301 RDEEEVRQLPCSHFFHLRCVDKWLSITSSCPLCKQQL 336

[Close]

BLAST of CmoCh09G010280 vs. NCBI nr
Match: gi|659126131|ref|XP_008463025.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X1 [Cucumis melo])

HSP 1 Score: 509.6 bits (1311), Expect = 4.7e-141
Identity = 251/347 (72.33%), Postives = 292/347 (84.15%), Query Frame = 1


Query: 47  MINSGYFISGPPCNYNGTASFISNLSVEEDGAGAD-VRDDNSVSLPASFWVRVAMRVSRA 106
           MI+SG+F+SGP  N + T SFIS     EDGA AD +R++ S S+P SFWV++AM++SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 107 RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWP 166
           RWFIFLRRVFHYQNGSRS+LG +PFNS  WMAMEL+A++FQL I+VF LAIS+ EKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120

Query: 167 MRLWIVGYDLGCVLSLLLLYGRYWHVYLMP----RVGLPDIEQRRSSQASRSLRLMNKCR 226
           MRLWI GYDLGCVLSLLLLYGR+ + YLM     R+   + EQ+RS+++SR   LMN+CR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180

Query: 227 SSLELFFAIWFVMGNVWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCC 286
           +SL+LFFAIWFVMGN+W+ DSR  SFQRAPKLHLLC FLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 287 VPLISSLLGYNINMASTDKGASDDQISELPCWRYKA------SSKQPDSNNKGLPKEDPE 346
           VPLISSL GYNINM S++KGASDDQIS+LPCWRYKA         QPD++N GL KEDPE
Sbjct: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE 300

Query: 347 CCICLVKYRDEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQLQR 383
           CCICL KY D+EEVR+LPCSH+FHLKCVDKWL+ITSSCPLCKQQLQR
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 347

[Close]

BLAST of CmoCh09G010280 vs. NCBI nr
Match: gi|778726317|ref|XP_011659087.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Cucumis sativus])

HSP 1 Score: 509.2 bits (1310), Expect = 6.2e-141
Identity = 253/347 (72.91%), Postives = 292/347 (84.15%), Query Frame = 1


Query: 47  MINSGYFISGPPCNYNGTASFISNLSVEEDGAGAD-VRDDNSVSLPASFWVRVAMRVSRA 106
           MI+SG+F+SGP  N + T SFIS    EEDGA AD +R++ S S+P SFWV++AM++SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSEEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 107 RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWP 166
           RWFIFLRRVFHYQNGSRS+LG +PFNS SWMAMEL+A++FQL I+ F LAIS+ EKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWP 120

Query: 167 MRLWIVGYDLGCVLSLLLLYGRYWHVYLMPRVG--LPDIE--QRRSSQASRSLRLMNKCR 226
           MRLWI GYDLGCVLSLLLLYGR+ + YLM R G  L DIE  Q+R++++SR   LMN+CR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIEHEQQRTNESSRYSHLMNRCR 180

Query: 227 SSLELFFAIWFVMGNVWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCC 286
           +SL+LFFAIWFVMGN+W  DSR  SFQRAPKLHLLC FLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 287 VPLISSLLGYNINMASTDKGASDDQISELPCWRYKA------SSKQPDSNNKGLPKEDPE 346
           VPLISSL GYNIN  ST+KGASDDQIS+LPCWRYKA         Q D++N GL KEDPE
Sbjct: 241 VPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLLKEDPE 300

Query: 347 CCICLVKYRDEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQLQR 383
           CCICL KY D+EEVR+LPCSH+FHL+CVDKWL+ITSSCPLCKQQLQR
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 347

[Close]

BLAST of CmoCh09G010280 vs. NCBI nr
Match: gi|659126133|ref|XP_008463026.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Cucumis melo])

HSP 1 Score: 483.0 bits (1242), Expect = 4.7e-133
Identity = 232/312 (74.36%), Postives = 269/312 (86.22%), Query Frame = 1


Query: 81  DVRDDNSVSLPASFWVRVAMRVSRARWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMEL 140
           D+R++ S S+P SFWV++AM++SRARWFIFLRRVFHYQNGSRS+LG +PFNS  WMAMEL
Sbjct: 4   DIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMEL 63

Query: 141 IAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHVYLMP----R 200
           +A++FQL I+VF LAIS+ EKPVWPMRLWI GYDLGCVLSLLLLYGR+ + YLM     R
Sbjct: 64  VALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNR 123

Query: 201 VGLPDIEQRRSSQASRSLRLMNKCRSSLELFFAIWFVMGNVWIVDSRFDSFQRAPKLHLL 260
           +   + EQ+RS+++SR   LMN+CR+SL+LFFAIWFVMGN+W+ DSR  SFQRAPKLHLL
Sbjct: 124 LSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLL 183

Query: 261 CVFLLVWNAICYSFPFILFLLLCCCVPLISSLLGYNINMASTDKGASDDQISELPCWRYK 320
           C FLLVWNAICYSFPFILFLLLCCCVPLISSL GYNINM S++KGASDDQIS+LPCWRYK
Sbjct: 184 CSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPCWRYK 243

Query: 321 A------SSKQPDSNNKGLPKEDPECCICLVKYRDEEEVRELPCSHLFHLKCVDKWLSIT 380
           A         QPD++N GL KEDPECCICL KY D+EEVR+LPCSH+FHLKCVDKWL+IT
Sbjct: 244 AVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIT 303

Query: 381 SSCPLCKQQLQR 383
           SSCPLCKQQLQR
Sbjct: 304 SSCPLCKQQLQR 315

The following BLAST results are available for this feature:

BLAST of CmoCh09G010280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RING4_ARATH	3.5e-27	30.48	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 ...	[more]
RING2_ARATH	1.3e-26	29.24	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 ...	[more]
RIE1_ARATH	7.3e-25	28.83	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1	[more]
RING1_ARATH	4.7e-24	26.45	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 ...	[more]
ATL37_ARATH	1.0e-10	33.07	Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana GN=ATL37 PE=3 SV=1	[more]

BLAST of CmoCh09G010280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7S5_CUCSA	3.9e-166	85.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278220 PE=4 SV=1	[more]
A0A0A0K4H0_CUCSA	4.3e-141	72.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278230 PE=4 SV=1	[more]
A0A0B0PCR8_GOSAR	1.8e-126	66.36	Uncharacterized protein OS=Gossypium arboreum GN=F383_06014 PE=4 SV=1	[more]
A0A061F5I6_THECC	9.6e-125	65.86	RING/U-box domain-containing protein isoform 2 OS=Theobroma cacao GN=TCM_030584 ...	[more]
A0A0D2R3G4_GOSRA	2.1e-124	65.44	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G102600 PE=4 SV=1	[more]

BLAST of CmoCh09G010280 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55970.1	4.7e-115	65.99	RING/U-box superfamily protein	[more]
AT4G26580.1	2.1e-110	59.51	RING/U-box superfamily protein	[more]
AT4G32600.1	5.9e-41	34.54	RING/U-box superfamily protein	[more]
AT1G80400.1	4.2e-39	40.51	RING/U-box superfamily protein	[more]
AT4G11680.1	2.0e-28	30.48	Zinc finger, C3HC4 type (RING finger) family protein	[more]

BLAST of CmoCh09G010280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126137\|ref\|XP_008463028.1\|	6.5e-167	85.84	PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis melo]	[more]
gi\|449463394\|ref\|XP_004149419.1\|	5.5e-166	85.76	PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis sativus]	[more]
gi\|659126131\|ref\|XP_008463025.1\|	4.7e-141	72.33	PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X1 [Cucumis melo]	[more]
gi\|778726317\|ref\|XP_011659087.1\|	6.2e-141	72.91	PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Cucumis sativu...	[more]
gi\|659126133\|ref\|XP_008463026.1\|	4.7e-133	74.36	PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR011016	Znf_RING-CH
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G010280.1	CmoCh09G010280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 334..377 score: 5.7
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 336..376 score: 2.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 336..377 score: 12
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 335..377 score: 0.
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 332..380 score: 1.2
None	No IPR available	unknown	Coil	Coil	coord: 377..382 scor
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 20..382 score: 2.9E
None	No IPR available	PANTHER	PTHR14155:SF83	RING/U-BOX DOMAIN-CONTAINING PROTEIN	coord: 20..382 score: 2.9E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 328..380 score: 3.53

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh09G010280	Cucurbita maxima (Rimu)	cmacmoB436
CmoCh09G010280	Cucurbita moschata (Rifu)	cmocmoB018
CmoCh09G010280	Cucumber (Gy14) v1	cgycmoB0671
CmoCh09G010280	Cucurbita maxima (Rimu)	cmacmoB027
CmoCh09G010280	Wild cucumber (PI 183967)	cmocpiB036
CmoCh09G010280	Wild cucumber (PI 183967)	cmocpiB037
CmoCh09G010280	Cucumber (Chinese Long) v2	cmocuB033
CmoCh09G010280	Cucumber (Chinese Long) v2	cmocuB034
CmoCh09G010280	Melon (DHL92) v3.5.1	cmomeB003
CmoCh09G010280	Melon (DHL92) v3.5.1	cmomeB004
CmoCh09G010280	Watermelon (Charleston Gray)	cmowcgB001
CmoCh09G010280	Watermelon (97103) v1	cmowmB001
CmoCh09G010280	Cucurbita pepo (Zucchini)	cmocpeB021
CmoCh09G010280	Cucurbita pepo (Zucchini)	cmocpeB034
CmoCh09G010280	Bottle gourd (USVL1VR-Ls)	cmolsiB006
CmoCh09G010280	Cucumber (Gy14) v2	cgybcmoB870
CmoCh09G010280	Cucumber (Gy14) v2	cgybcmoB871
CmoCh09G010280	Melon (DHL92) v3.6.1	cmomedB003
CmoCh09G010280	Melon (DHL92) v3.6.1	cmomedB007
CmoCh09G010280	Silver-seed gourd	carcmoB0106
CmoCh09G010280	Silver-seed gourd	carcmoB0586
CmoCh09G010280	Cucumber (Chinese Long) v3	cmocucB0040
CmoCh09G010280	Cucumber (Chinese Long) v3	cmocucB0041
CmoCh09G010280	Watermelon (97103) v2	cmowmbB035
CmoCh09G010280	Wax gourd	cmowgoB0021