CmoCh09G006840 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G006840
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCmo_Chr09 : 3393200 .. 3394408 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCACCTTCACAACGACTCGCTCAACTCTCTGTGTTAAACTCCATCTTTTCTTCATCATCTTCTTCGATTCCTCTTCGTCTTCCTTCTTCTTCATTCTCTTTCTCCACTTCCCCTAAACAATCCTCTGCTCTTCCGCACAGGCTCAGCCATAGAGATTGGTTGTCTCCTAATGAAGTCATCAAAATCATCCAACAAATCAGAGATCCTCCCGCTGTGCTCGCGTTCATCCACCAATGGTCCAATCGCAAGGACTACAAACCCAACAAAGAAATCTACACTCTGGTTGTGTCCAGGCTTGCGGAGGGGTGTTTGTTTGATGATATTGAAACAGTGATGCTGAGAATAAAATCCGAAAGGAATTTTCGGTTGTCCGATGAATTTTTCTACCACGTTATCAAGATTTATGGCAATGTTGCTGGGCGTATAGGTAAAGCGATTGAAACCCTTTTCGATATGCCTAATTATAACTGCTGGCCGAGTGTTAAAACCTTTAATTTTGTGCTTAATTTGCTTGTTTCGGCGAAGATGTTTGACGTTGTTCATGAGGTGTATATGGGTGCTCCTAAGTTGGGGATTGAGATTGATGCTTGTTGTCTTAATATACTCATCAAAGGGTTGTGCGAGAGTGGGAATTTGAATGCTGCACTCAAGGTGTTCGATGAATTTCCTCAACAAAAGTGTAGGCCAAATGTGAGAACATTCTCAACGCTTATGCATGCATTGTGCGACAATGGTGAACTAGAGAGAGCATCTGAGCTTTTCTCTAGAATGGAAAACGAAGGTGTTTGTCCAGATACTATAACGTTTAACATATTGATTTCGGGTCTTAGAAAGCAGAAGAGGATTGAAGAGGCCATAGAACTTTTGGATAGAATGAAGCTCAAAGGCTGCTACCCCAATGCAGGGACTTATCAAGAGGTTTTGTATGGCCTGCTCGACTCGGGTAGGTTGATCGAGGCGAGGGATTGTATGCGTCGAATGATTTTGGATCGTATGGACCCAAGCTTTGTTTCTTACAAGAAATTGTTGTCTGGGTTATGCAAGAAGAATTTGACTGAGGATGTGGATTGGGTTCTAAAGCAGATGGTTATGCAAGGTTTCGTCCCGAAAATGGAGATGTGGAAAGCGATTTTACGCTGTATGTTAGCAGGAAATGAAGATTACAGTGAAGCCACTGGTAAAGTAATCGAAAAACTTATATGA

mRNA sequence

ATGGTTTCACCTTCACAACGACTCGCTCAACTCTCTGTGTTAAACTCCATCTTTTCTTCATCATCTTCTTCGATTCCTCTTCGTCTTCCTTCTTCTTCATTCTCTTTCTCCACTTCCCCTAAACAATCCTCTGCTCTTCCGCACAGGCTCAGCCATAGAGATTGGTTGTCTCCTAATGAAGTCATCAAAATCATCCAACAAATCAGAGATCCTCCCGCTGTGCTCGCGTTCATCCACCAATGGTCCAATCGCAAGGACTACAAACCCAACAAAGAAATCTACACTCTGGTTGTGTCCAGGCTTGCGGAGGGGTGTTTGTTTGATGATATTGAAACAGTGATGCTGAGAATAAAATCCGAAAGGAATTTTCGGTTGTCCGATGAATTTTTCTACCACGTTATCAAGATTTATGGCAATGTTGCTGGGCGTATAGGTAAAGCGATTGAAACCCTTTTCGATATGCCTAATTATAACTGCTGGCCGAGTGTTAAAACCTTTAATTTTGTGCTTAATTTGCTTGTTTCGGCGAAGATGTTTGACGTTGTTCATGAGGTGTATATGGGTGCTCCTAAGTTGGGGATTGAGATTGATGCTTGTTGTCTTAATATACTCATCAAAGGGTTGTGCGAGAGTGGGAATTTGAATGCTGCACTCAAGGTGTTCGATGAATTTCCTCAACAAAAGTGTAGGCCAAATGTGAGAACATTCTCAACGCTTATGCATGCATTGTGCGACAATGGTGAACTAGAGAGAGCATCTGAGCTTTTCTCTAGAATGGAAAACGAAGGTGTTTGTCCAGATACTATAACGTTTAACATATTGATTTCGGGTCTTAGAAAGCAGAAGAGGATTGAAGAGGCCATAGAACTTTTGGATAGAATGAAGCTCAAAGGCTGCTACCCCAATGCAGGGACTTATCAAGAGGTTTTGTATGGCCTGCTCGACTCGGGTAGGTTGATCGAGGCGAGGGATTGTATGCGTCGAATGATTTTGGATCGTATGGACCCAAGCTTTGTTTCTTACAAGAAATTGTTGTCTGGGTTATGCAAGAAGAATTTGACTGAGGATGTGGATTGGGTTCTAAAGCAGATGGTTATGCAAGGTTTCGTCCCGAAAATGGAGATGTGGAAAGCGATTTTACGCTGTATGTTAGCAGGAAATGAAGATTACAGTGAAGCCACTGGTAAAGTAATCGAAAAACTTATATGA

Coding sequence (CDS)

ATGGTTTCACCTTCACAACGACTCGCTCAACTCTCTGTGTTAAACTCCATCTTTTCTTCATCATCTTCTTCGATTCCTCTTCGTCTTCCTTCTTCTTCATTCTCTTTCTCCACTTCCCCTAAACAATCCTCTGCTCTTCCGCACAGGCTCAGCCATAGAGATTGGTTGTCTCCTAATGAAGTCATCAAAATCATCCAACAAATCAGAGATCCTCCCGCTGTGCTCGCGTTCATCCACCAATGGTCCAATCGCAAGGACTACAAACCCAACAAAGAAATCTACACTCTGGTTGTGTCCAGGCTTGCGGAGGGGTGTTTGTTTGATGATATTGAAACAGTGATGCTGAGAATAAAATCCGAAAGGAATTTTCGGTTGTCCGATGAATTTTTCTACCACGTTATCAAGATTTATGGCAATGTTGCTGGGCGTATAGGTAAAGCGATTGAAACCCTTTTCGATATGCCTAATTATAACTGCTGGCCGAGTGTTAAAACCTTTAATTTTGTGCTTAATTTGCTTGTTTCGGCGAAGATGTTTGACGTTGTTCATGAGGTGTATATGGGTGCTCCTAAGTTGGGGATTGAGATTGATGCTTGTTGTCTTAATATACTCATCAAAGGGTTGTGCGAGAGTGGGAATTTGAATGCTGCACTCAAGGTGTTCGATGAATTTCCTCAACAAAAGTGTAGGCCAAATGTGAGAACATTCTCAACGCTTATGCATGCATTGTGCGACAATGGTGAACTAGAGAGAGCATCTGAGCTTTTCTCTAGAATGGAAAACGAAGGTGTTTGTCCAGATACTATAACGTTTAACATATTGATTTCGGGTCTTAGAAAGCAGAAGAGGATTGAAGAGGCCATAGAACTTTTGGATAGAATGAAGCTCAAAGGCTGCTACCCCAATGCAGGGACTTATCAAGAGGTTTTGTATGGCCTGCTCGACTCGGGTAGGTTGATCGAGGCGAGGGATTGTATGCGTCGAATGATTTTGGATCGTATGGACCCAAGCTTTGTTTCTTACAAGAAATTGTTGTCTGGGTTATGCAAGAAGAATTTGACTGAGGATGTGGATTGGGTTCTAAAGCAGATGGTTATGCAAGGTTTCGTCCCGAAAATGGAGATGTGGAAAGCGATTTTACGCTGTATGTTAGCAGGAAATGAAGATTACAGTGAAGCCACTGGTAAAGTAATCGAAAAACTTATATGA
Homology
[Close]
BLAST of CmoCh09G006840 vs. Swiss-Prot
Match: PP230_ARATH (Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 8.0e-123
Identity = 209/377 (55.44%), Postives = 283/377 (75.07%), Query Frame = 1 

Query: 19  SSSSSSIPLRLPSSSFSFSTSPKQSSALPH--RLSHRDWLSPNEVIKIIQQIRDPPAVLA 78
           S SSS + +   SSS  +++S ++ S      RL H+DWL+PNEV+KI   ++DP  +L 
Sbjct: 21  SLSSSGVRILSSSSSDRYTSSSQRYSGDDRLARLRHKDWLAPNEVLKIFDNVKDPSFLLP 80

Query: 79  FIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKI 138
               +S RKDY+P + +Y L++++  +  ++D+IE VM  IK E+  R S+EFFY++++I
Sbjct: 81  AYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRI 140

Query: 139 YGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEI 198
           YGN+AGRI +AIE LF MP++ CWPS K+FNF+LNLLVSAK+FD +H++++ APKLG+EI
Sbjct: 141 YGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEI 200

Query: 199 DACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELF 258
           DACCLNILIKGLCESGNL AAL++ DEFPQQK RPNV TFS L+   C+ G+ E A +L 
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260

Query: 259 SRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDS 318
            RME E + PDTITFNILISGLRK+ R+EE I+LL+RMK+KGC PN GTYQEVLYGLLD 
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320

Query: 319 GRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMW 378
            R +EA++ M +MI   M PSF+SYKK++ GLC+     ++DWVL+QMV  GFVPK  MW
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380

Query: 379 KAILRCMLAGNEDYSEA 394
             +++C+++ N D S+A
Sbjct: 381 WKVVQCVVSKNNDDSQA 397

[Close]
BLAST of CmoCh09G006840 vs. Swiss-Prot
Match: PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-41
Identity = 95/328 (28.96%), Postives = 173/328 (52.74%), Query Frame = 1 

Query: 56  LSPNEVIKIIQQIRDPPAVLAFIHQWSNR--KDYKPNKEIYTLVVSRLAEGCLFDDIETV 115
           ++P++VIK+++  +D    +A     +      Y  ++  +  +V RL     F   E +
Sbjct: 14  ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73

Query: 116 MLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLL 175
           ++R+K E N  +S++    + + YG V  R   ++     M +++C PS K +  VL +L
Sbjct: 74  IVRMKIE-NCVVSEDILLSICRGYGRVH-RPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 133

Query: 176 VSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCES-GNLNAALKVFDEFPQQKCRPN 235
           V     ++  + Y    ++G+      LN+LIK LC + G ++A LK+F E P++ C P+
Sbjct: 134 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 193

Query: 236 VRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLD 295
             T+ TL+  LC  G ++ A +LF+ M  +   P  +T+  LI+GL   K ++EA+  L+
Sbjct: 194 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 253

Query: 296 RMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKN 355
            MK KG  PN  TY  ++ GL   GR ++A +    M+     P+ V+Y  L++GLCK+ 
Sbjct: 254 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 313

Query: 356 LTEDVDWVLKQMVMQGFVPKMEMWKAIL 381
             ++   +L +M +QG  P   ++  ++
Sbjct: 314 KIQEAVELLDRMNLQGLKPDAGLYGKVI 339

[Close]
BLAST of CmoCh09G006840 vs. Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 3.0e-37
Identity = 94/358 (26.26%), Postives = 186/358 (51.96%), Query Frame = 1 

Query: 31  SSSFSFSTSPKQSSALPHRLSHRDWL-SPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKP 90
           SS F F +S +  +  P   + +  + SP  V K+I    DP          S + +++ 
Sbjct: 23  SSRFLFYSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRH 82

Query: 91  NKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIE 150
           ++  + +++ +L  G  F+ I+ V+ + +S   + L+ E F ++IK+Y   A    K + 
Sbjct: 83  SRSSHLILILKLGRGRYFNLIDDVLAKHRSS-GYPLTGEIFTYLIKVYAE-AKLPEKVLS 142

Query: 151 TLFDMPNYNCWPSVKTFNFVLNLLVSAKMF-DVVHEVYMGAPKLGIEIDACCLNILIKGL 210
           T + M  +N  P  K  N +L++LVS + +     E++  +   G+  +    N+L++  
Sbjct: 143 TFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAF 202

Query: 211 CESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDT 270
           C + +L+ A ++F +  ++   P+V ++  L+   C  G++  A EL   M N+G  PD 
Sbjct: 203 CLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR 262

Query: 271 ITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRR 330
           +++  L++ L ++ ++ EA +LL RMKLKGC P+   Y  ++ G     R ++AR  +  
Sbjct: 263 LSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDD 322

Query: 331 MILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAG 387
           M+ +   P+ VSY+ L+ GLC + + ++    L++M+ +GF P      ++  C++ G
Sbjct: 323 MLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF----SVSNCLVKG 374

[Close]
BLAST of CmoCh09G006840 vs. Swiss-Prot
Match: PPR20_ARATH (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.1e-37
Identity = 97/344 (28.20%), Postives = 177/344 (51.45%), Query Frame = 1 

Query: 41  KQSSALP-HRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSN---RKDYKPNKEIYTL 100
           K SS  P H+ + + W      +  +++I DP   L+  HQ+     R DY      Y+ 
Sbjct: 32  KASSHEPTHKFTRKPW-EEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHDYPS----YSS 91

Query: 101 VVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPN 160
           ++ +LA+   FD ++ + LR+   RN R  +  F  +I+ YG  AG + KAI+    + +
Sbjct: 92  LIYKLAKSRNFDAVDQI-LRLVRYRNVRCRESLFMGLIQHYGK-AGSVDKAIDVFHKITS 151

Query: 161 YNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNA 220
           ++C  ++++ N ++N+LV     +     + GA  + +  ++   NILIKG  +  +  A
Sbjct: 152 FDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEA 211

Query: 221 ALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILIS 280
           A KVFDE  + + +P+V T+++L+  LC N ++ +A  L   M  + + P+ +TF +L+ 
Sbjct: 212 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 271

Query: 281 GLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDP 340
           GL  +    EA +L+  M+ +GC P    Y  ++  L   GR+ EA+  +  M   R+ P
Sbjct: 272 GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 331

Query: 341 SFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAIL 381
             V Y  L++ LC +    +   VL +M M+G  P    ++ ++
Sbjct: 332 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368

[Close]
BLAST of CmoCh09G006840 vs. Swiss-Prot
Match: PP327_ARATH (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-36
Identity = 101/366 (27.60%), Postives = 179/366 (48.91%), Query Frame = 1 

Query: 25  IPLRLPSSSFSFSTSPKQSS-----ALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIH 84
           IP+R+   S+    S   SS     ++  R S    +SPN  +++++   + P       
Sbjct: 6   IPIRISFFSYFLKESRILSSNPVNFSIHLRFSSSVSVSPNPSMEVVENPLEAPISEKMFK 65

Query: 85  QWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGN 144
                  +K      + ++   A    FD +E ++ RI+ E N  + +  F  V + YG 
Sbjct: 66  SAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLE-NRVIIERSFIVVFRAYGK 125

Query: 145 VAGRIGKAIETLFDMPN-YNCWPSVKTFNFVLNLLVSAKMFDVVHEVY----MGAPKLGI 204
            A    KA++    M + + C  SVK+FN VLN++++  ++    E Y         + I
Sbjct: 126 -AHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 185

Query: 205 EIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASE 264
             +    N++IK LC+   ++ A++VF   P++KC P+  T+ TLM  LC    ++ A  
Sbjct: 186 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 245

Query: 265 LFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLL 324
           L   M++EG  P  + +N+LI GL K+  +    +L+D M LKGC PN  TY  +++GL 
Sbjct: 246 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 305

Query: 325 DSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKME 381
             G+L +A   + RM+  +  P+ V+Y  L++GL K+    D   +L  M  +G+     
Sbjct: 306 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 365

[Close]
BLAST of CmoCh09G006840 vs. TrEMBL
Match: A0A0A0KZE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G621180 PE=4 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 5.3e-198
Identity = 340/402 (84.58%), Postives = 367/402 (91.29%), Query Frame = 1 

Query: 1   MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 60
           M+  S RL+QL +LNSIFSSSS SIPL LPSSS SFSTSPKQ S  PH+LSHRDWLSPNE
Sbjct: 1   MIRSSLRLSQLFLLNSIFSSSSPSIPLHLPSSSSSFSTSPKQPSVFPHKLSHRDWLSPNE 60

Query: 61  VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 120
           VI IIQQI+ P +VLAF+HQWSNRKDYKPNKEIYTLVVSRLAEG LFDDIE VMLRIK+E
Sbjct: 61  VINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLFDDIEKVMLRIKAE 120

Query: 121 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
           RNFRLSDEFFYHVIKIYGNVAGR+ KAI+TLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD
Sbjct: 121 RNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180

Query: 181 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 240
           VVHEVYMGAPKLGIEIDACCLNIL+KGLC+SGNL+AALKV DEFPQQ+CRPNVRTFSTL+
Sbjct: 181 VVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLL 240

Query: 241 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 300
           H LC+NGEL RA ELF +MENEGVCPDTITFNILISGLRK+KRIEEAIELL RMKLKGCY
Sbjct: 241 HGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMKLKGCY 300

Query: 301 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 360
           PNAGTYQEVLYGLLD+G+ IEARDCM RMI + MDPSFVSYKKLLSGLCKK LTEDVDWV
Sbjct: 301 PNAGTYQEVLYGLLDTGKFIEARDCMHRMISEGMDPSFVSYKKLLSGLCKKKLTEDVDWV 360

Query: 361 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 403
           LKQMVMQGFVPK+ MWK ILRCML+GNE+  + T +V EK +
Sbjct: 361 LKQMVMQGFVPKVGMWKVILRCMLSGNEECIDITDEVFEKFV 402

[Close]
BLAST of CmoCh09G006840 vs. TrEMBL
Match: A0A059BUE5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03214 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 5.4e-134
Identity = 220/337 (65.28%), Postives = 281/337 (83.38%), Query Frame = 1 

Query: 49  RLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFD 108
           RL H+DWL+PNE+IKII+ +RDP +++  ++++  RKDYKPN+ ++T+ ++RLA   +FD
Sbjct: 31  RLDHKDWLAPNEIIKIIKILRDPNSIIRALNRYEKRKDYKPNEALFTMAINRLARAEMFD 90

Query: 109 DIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNF 168
            IE ++ RI  ER  RLSDEFFY+VIKIYGN+AGRI +AIETL+DMP Y+ WPSVK FN+
Sbjct: 91  PIEDIVRRIVKERPCRLSDEFFYNVIKIYGNMAGRINRAIETLYDMPKYDVWPSVKCFNY 150

Query: 169 VLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQK 228
           VLNLLVS K+FDVVHEVYM  P+LGIE+DACCLNILIKGLC++G+L AA ++ DEFP+Q+
Sbjct: 151 VLNLLVSWKLFDVVHEVYMRGPRLGIEVDACCLNILIKGLCKNGSLEAAFQMLDEFPKQR 210

Query: 229 CRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAI 288
           CRPNV+TFSTLMH LC+ G+++ A  L  RMENEG+ PDTITFNILISGLRKQ+R+EEA+
Sbjct: 211 CRPNVKTFSTLMHGLCERGKVDDAKALLDRMENEGIFPDTITFNILISGLRKQERVEEAM 270

Query: 289 ELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGL 348
           ELL+RMKLKGC PNAG+YQEVLYGLLD GR +EA++ M  MI   ++PSFVSYK ++ GL
Sbjct: 271 ELLERMKLKGCQPNAGSYQEVLYGLLDEGRFVEAKEFMAEMISTGINPSFVSYKSVIGGL 330

Query: 349 CKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLA 386
           CK+ L  DVDWVLK+M+ QGFVPKM MW+ IL+ M +
Sbjct: 331 CKEKLVGDVDWVLKRMIEQGFVPKMGMWRQILQSMFS 367

[Close]
BLAST of CmoCh09G006840 vs. TrEMBL
Match: V4TUT4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020422mg PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 9.4e-131
Identity = 227/378 (60.05%), Postives = 291/378 (76.98%), Query Frame = 1 

Query: 12  SVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNEVIKIIQQIRDP 71
           S++ S+  SS+S+I  +   +  S S S + S    ++L+H+DWLSP EV+KI   +RDP
Sbjct: 14  SIIQSL--SSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDP 73

Query: 72  PAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFY 131
            +V++ ++Q+S RKDY PN+ +YTL++++LA+   FD IE +M RIK E+  R SD FFY
Sbjct: 74  ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 133

Query: 132 HVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPK 191
           +VIKIYGN+AGRI KAIETLFDMP+YNCWPSVKTFN VLNLLVSAK+F  +  +Y  A K
Sbjct: 134 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLFGEIQGIYTSAAK 193

Query: 192 LGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELER 251
           LG+EIDACCLNIL+KGLCE+GNL AA  V DEFP+Q C PNVRT+STLMH LC+ G +E 
Sbjct: 194 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 253

Query: 252 ASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLY 311
           A  L  RME+EG+  DT+TFNILISGLRKQ ++EE ++LL+RMK KGCYPN+ +YQEVLY
Sbjct: 254 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 313

Query: 312 GLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVP 371
           GLLD  R  EA++ + RMI +RM PSFVSYKKL+ GLC + L EDVDWVLK MV QGFVP
Sbjct: 314 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKTMVQQGFVP 373

Query: 372 KMEMWKAILRCMLAGNED 390
           +M MW+ I+ C+  G ++
Sbjct: 374 RMGMWREIVGCVTFGKDN 389

[Close]
BLAST of CmoCh09G006840 vs. TrEMBL
Match: A0A067EEL2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015590mg PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.2e-130
Identity = 226/378 (59.79%), Postives = 292/378 (77.25%), Query Frame = 1 

Query: 12  SVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNEVIKIIQQIRDP 71
           S++ S+  SS+S+I  +   +  S S S + S    ++L+H+DWLSP EV+KI   +RDP
Sbjct: 14  SIIQSL--SSASTITRKRTFALASPSASHQDSDHHAYKLNHKDWLSPTEVLKIFSNLRDP 73

Query: 72  PAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFY 131
            +V++ ++Q+S RKDY PN+ +YTL++++LA+   FD IE +M RIK E+  R SD FFY
Sbjct: 74  ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFDAIEDIMQRIKVEKLCRFSDGFFY 133

Query: 132 HVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPK 191
           +VIKIYGN+AGRI KAIETLFDMP+YNCWPSVKTFN VLNLLVSAK++  +  +Y  A K
Sbjct: 134 NVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 193

Query: 192 LGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELER 251
           LG+EIDACCLNIL+KGLCE+GNL AA  V DEFP+Q C PNVRT+STLMH LC+ G +E 
Sbjct: 194 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTYSTLMHGLCEKGNVEE 253

Query: 252 ASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLY 311
           A  L  RME+EG+  DT+TFNILISGLRKQ ++EE ++LL+RMK KGCYPN+ +YQEVLY
Sbjct: 254 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 313

Query: 312 GLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVP 371
           GLLD  R  EA++ + RMI +RM PSFVSYKKL+ GLC + L EDVDWVLK+MV QGFVP
Sbjct: 314 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 373

Query: 372 KMEMWKAILRCMLAGNED 390
           +M MW+ I+ C+  G ++
Sbjct: 374 RMGMWREIVGCVTFGKDN 389

[Close]
BLAST of CmoCh09G006840 vs. TrEMBL
Match: F6GX44_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0138g00130 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 2.6e-128
Identity = 229/389 (58.87%), Postives = 295/389 (75.84%), Query Frame = 1 

Query: 12  SVLNSIFSSSSSSI---PLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNEVIKIIQQI 71
           S+L  I+ S S S    P  +  S+F FST P        RL H+DWLSP EV+KI   +
Sbjct: 7   SILLRIYRSVSRSALIHPTLIQKSTF-FSTFPPDDLK---RLDHKDWLSPREVLKIFDGL 66

Query: 72  RDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDE 131
           R+P +V+  +   S RKD+KPN+ +YTLV+++LA+  +FD IE V+  +K ++  RLSD 
Sbjct: 67  RNPESVMPVLDSVSKRKDFKPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDV 126

Query: 132 FFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMG 191
           FFY+VIK+YGNVAG+  +A+ETLFDMP ++CWPSVKTFN VLN+LVSAK FDVVH+VY G
Sbjct: 127 FFYNVIKVYGNVAGQPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAG 186

Query: 192 APKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGE 251
           AP+LG+EIDACCLNIL+KGLC SGN++AA ++ DE+P+Q+CRPNVRTFSTLMH LC++G 
Sbjct: 187 APELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGR 246

Query: 252 LERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQE 311
           +E A  L  RME EGV PDT+ FNILISGLRK+ R+EE +ELL RMKLKGCYPNAG+YQE
Sbjct: 247 VEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQE 306

Query: 312 VLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQG 371
           VLYG+LD+GR  +A++ M +MI + + PSFVSYK ++ GLCK+NL  DV W+LKQMV QG
Sbjct: 307 VLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMMIYGLCKENLVADVVWILKQMVEQG 366

Query: 372 FVPKMEMWKAILRCMLAGNEDYSEATGKV 398
           FVP+  MW+ IL+ M   N   SE   +V
Sbjct: 367 FVPERWMWRRILQTMFPRNVSQSEIMEEV 391

[Close]
BLAST of CmoCh09G006840 vs. TAIR10
Match: AT3G14580.1 (AT3G14580.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 441.8 bits (1135), Expect = 4.5e-124
Identity = 209/377 (55.44%), Postives = 283/377 (75.07%), Query Frame = 1 

Query: 19  SSSSSSIPLRLPSSSFSFSTSPKQSSALPH--RLSHRDWLSPNEVIKIIQQIRDPPAVLA 78
           S SSS + +   SSS  +++S ++ S      RL H+DWL+PNEV+KI   ++DP  +L 
Sbjct: 21  SLSSSGVRILSSSSSDRYTSSSQRYSGDDRLARLRHKDWLAPNEVLKIFDNVKDPSFLLP 80

Query: 79  FIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKI 138
               +S RKDY+P + +Y L++++  +  ++D+IE VM  IK E+  R S+EFFY++++I
Sbjct: 81  AYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRI 140

Query: 139 YGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEI 198
           YGN+AGRI +AIE LF MP++ CWPS K+FNF+LNLLVSAK+FD +H++++ APKLG+EI
Sbjct: 141 YGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEI 200

Query: 199 DACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELF 258
           DACCLNILIKGLCESGNL AAL++ DEFPQQK RPNV TFS L+   C+ G+ E A +L 
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260

Query: 259 SRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDS 318
            RME E + PDTITFNILISGLRK+ R+EE I+LL+RMK+KGC PN GTYQEVLYGLLD 
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320

Query: 319 GRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMW 378
            R +EA++ M +MI   M PSF+SYKK++ GLC+     ++DWVL+QMV  GFVPK  MW
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380

Query: 379 KAILRCMLAGNEDYSEA 394
             +++C+++ N D S+A
Sbjct: 381 WKVVQCVVSKNNDDSQA 397

[Close]
BLAST of CmoCh09G006840 vs. TAIR10
Match: AT5G46100.1 (AT5G46100.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 171.8 bits (434), Expect = 8.7e-43
Identity = 95/328 (28.96%), Postives = 173/328 (52.74%), Query Frame = 1 

Query: 56  LSPNEVIKIIQQIRDPPAVLAFIHQWSNR--KDYKPNKEIYTLVVSRLAEGCLFDDIETV 115
           ++P++VIK+++  +D    +A     +      Y  ++  +  +V RL     F   E +
Sbjct: 14  ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73

Query: 116 MLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLL 175
           ++R+K E N  +S++    + + YG V  R   ++     M +++C PS K +  VL +L
Sbjct: 74  IVRMKIE-NCVVSEDILLSICRGYGRVH-RPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 133

Query: 176 VSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCES-GNLNAALKVFDEFPQQKCRPN 235
           V     ++  + Y    ++G+      LN+LIK LC + G ++A LK+F E P++ C P+
Sbjct: 134 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 193

Query: 236 VRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLD 295
             T+ TL+  LC  G ++ A +LF+ M  +   P  +T+  LI+GL   K ++EA+  L+
Sbjct: 194 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 253

Query: 296 RMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKN 355
            MK KG  PN  TY  ++ GL   GR ++A +    M+     P+ V+Y  L++GLCK+ 
Sbjct: 254 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 313

Query: 356 LTEDVDWVLKQMVMQGFVPKMEMWKAIL 381
             ++   +L +M +QG  P   ++  ++
Sbjct: 314 KIQEAVELLDRMNLQGLKPDAGLYGKVI 339

[Close]
BLAST of CmoCh09G006840 vs. TAIR10
Match: AT1G07740.1 (AT1G07740.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 156.8 bits (395), Expect = 2.9e-38
Identity = 97/344 (28.20%), Postives = 177/344 (51.45%), Query Frame = 1 

Query: 41  KQSSALP-HRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSN---RKDYKPNKEIYTL 100
           K SS  P H+ + + W      +  +++I DP   L+  HQ+     R DY      Y+ 
Sbjct: 32  KASSHEPTHKFTRKPW-EEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHDYPS----YSS 91

Query: 101 VVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPN 160
           ++ +LA+   FD ++ + LR+   RN R  +  F  +I+ YG  AG + KAI+    + +
Sbjct: 92  LIYKLAKSRNFDAVDQI-LRLVRYRNVRCRESLFMGLIQHYGK-AGSVDKAIDVFHKITS 151

Query: 161 YNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNA 220
           ++C  ++++ N ++N+LV     +     + GA  + +  ++   NILIKG  +  +  A
Sbjct: 152 FDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEA 211

Query: 221 ALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILIS 280
           A KVFDE  + + +P+V T+++L+  LC N ++ +A  L   M  + + P+ +TF +L+ 
Sbjct: 212 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 271

Query: 281 GLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDP 340
           GL  +    EA +L+  M+ +GC P    Y  ++  L   GR+ EA+  +  M   R+ P
Sbjct: 272 GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 331

Query: 341 SFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAIL 381
             V Y  L++ LC +    +   VL +M M+G  P    ++ ++
Sbjct: 332 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368

[Close]
BLAST of CmoCh09G006840 vs. TAIR10
Match: AT4G20090.1 (AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 155.2 bits (391), Expect = 8.4e-38
Identity = 101/366 (27.60%), Postives = 179/366 (48.91%), Query Frame = 1 

Query: 25  IPLRLPSSSFSFSTSPKQSS-----ALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIH 84
           IP+R+   S+    S   SS     ++  R S    +SPN  +++++   + P       
Sbjct: 6   IPIRISFFSYFLKESRILSSNPVNFSIHLRFSSSVSVSPNPSMEVVENPLEAPISEKMFK 65

Query: 85  QWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGN 144
                  +K      + ++   A    FD +E ++ RI+ E N  + +  F  V + YG 
Sbjct: 66  SAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLE-NRVIIERSFIVVFRAYGK 125

Query: 145 VAGRIGKAIETLFDMPN-YNCWPSVKTFNFVLNLLVSAKMFDVVHEVY----MGAPKLGI 204
            A    KA++    M + + C  SVK+FN VLN++++  ++    E Y         + I
Sbjct: 126 -AHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 185

Query: 205 EIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASE 264
             +    N++IK LC+   ++ A++VF   P++KC P+  T+ TLM  LC    ++ A  
Sbjct: 186 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 245

Query: 265 LFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLL 324
           L   M++EG  P  + +N+LI GL K+  +    +L+D M LKGC PN  TY  +++GL 
Sbjct: 246 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 305

Query: 325 DSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKME 381
             G+L +A   + RM+  +  P+ V+Y  L++GL K+    D   +L  M  +G+     
Sbjct: 306 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 365

[Close]
BLAST of CmoCh09G006840 vs. TAIR10
Match: AT1G74580.1 (AT1G74580.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 145.2 bits (365), Expect = 8.7e-35
Identity = 86/325 (26.46%), Postives = 152/325 (46.77%), Query Frame = 1 

Query: 56  LSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVML 115
           L P  V  +I+  +DP   L   +       +K     Y  V+ +L     F+ +E V++
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64

Query: 116 RIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVS 175
            ++      + +  +   +K YG   G++ +A+     M  Y+C P+V ++N ++++LV 
Sbjct: 65  DMRENVGNHMLEGVYVGAMKNYGR-KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124

Query: 176 AKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRT 235
           +  FD  H+VYM     GI  D     I +K  C++   +AAL++ +    Q C  NV  
Sbjct: 125 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 184

Query: 236 FSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMK 295
           + T++    +        ELF +M   GV     TFN L+  L K+  ++E  +LLD++ 
Sbjct: 185 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 244

Query: 296 LKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTE 355
            +G  PN  TY   + GL   G L  A   +  +I     P  ++Y  L+ GLCK +  +
Sbjct: 245 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 304

Query: 356 DVDWVLKQMVMQGFVPKMEMWKAIL 381
           + +  L +MV +G  P    +  ++
Sbjct: 305 EAEVYLGKMVNEGLEPDSYTYNTLI 328

[Close]
BLAST of CmoCh09G006840 vs. NCBI nr
Match: gi|449456671|ref|XP_004146072.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Cucumis sativus])

HSP 1 Score: 698.4 bits (1801), Expect = 7.5e-198
Identity = 340/402 (84.58%), Postives = 367/402 (91.29%), Query Frame = 1 

Query: 1   MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 60
           M+  S RL+QL +LNSIFSSSS SIPL LPSSS SFSTSPKQ S  PH+LSHRDWLSPNE
Sbjct: 1   MIRSSLRLSQLFLLNSIFSSSSPSIPLHLPSSSSSFSTSPKQPSVFPHKLSHRDWLSPNE 60

Query: 61  VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 120
           VI IIQQI+ P +VLAF+HQWSNRKDYKPNKEIYTLVVSRLAEG LFDDIE VMLRIK+E
Sbjct: 61  VINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLFDDIEKVMLRIKAE 120

Query: 121 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
           RNFRLSDEFFYHVIKIYGNVAGR+ KAI+TLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD
Sbjct: 121 RNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180

Query: 181 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 240
           VVHEVYMGAPKLGIEIDACCLNIL+KGLC+SGNL+AALKV DEFPQQ+CRPNVRTFSTL+
Sbjct: 181 VVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLL 240

Query: 241 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 300
           H LC+NGEL RA ELF +MENEGVCPDTITFNILISGLRK+KRIEEAIELL RMKLKGCY
Sbjct: 241 HGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMKLKGCY 300

Query: 301 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 360
           PNAGTYQEVLYGLLD+G+ IEARDCM RMI + MDPSFVSYKKLLSGLCKK LTEDVDWV
Sbjct: 301 PNAGTYQEVLYGLLDTGKFIEARDCMHRMISEGMDPSFVSYKKLLSGLCKKKLTEDVDWV 360

Query: 361 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 403
           LKQMVMQGFVPK+ MWK ILRCML+GNE+  + T +V EK +
Sbjct: 361 LKQMVMQGFVPKVGMWKVILRCMLSGNEECIDITDEVFEKFV 402

[Close]
BLAST of CmoCh09G006840 vs. NCBI nr
Match: gi|659127375|ref|XP_008463670.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Cucumis melo])

HSP 1 Score: 689.9 bits (1779), Expect = 2.7e-195
Identity = 336/402 (83.58%), Postives = 367/402 (91.29%), Query Frame = 1 

Query: 1   MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 60
           M+  S RL+QLS+LNSIFSSSS SIPL LPSSS SFSTSPKQ S   H+LSHRDWLSPNE
Sbjct: 1   MIRSSLRLSQLSLLNSIFSSSSPSIPLHLPSSSSSFSTSPKQPSVFSHKLSHRDWLSPNE 60

Query: 61  VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 120
           VIKIIQQI+ P +VLAF+HQWSNRKDYKPNKEIYTL+VSRLAEG LFDDIE VMLRIK+E
Sbjct: 61  VIKIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLIVSRLAEGRLFDDIEKVMLRIKAE 120

Query: 121 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
           RNFRLSDEFFYHVIKIYGNVAGR+ KAI+TLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD
Sbjct: 121 RNFRLSDEFFYHVIKIYGNVAGRLSKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180

Query: 181 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 240
           VVHEVYMGAPKLGIEIDACCLNIL+KGLC+SGNL+AA K+ DEFPQQ+CRPNVRTFSTL+
Sbjct: 181 VVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAAFKLLDEFPQQRCRPNVRTFSTLL 240

Query: 241 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 300
           H LC+NGELERA ELF +MENEGV PDTITFNILISGLRK+KRIEEAIELL RM+LKGC 
Sbjct: 241 HGLCENGELERALELFCKMENEGVWPDTITFNILISGLRKKKRIEEAIELLRRMELKGCD 300

Query: 301 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 360
           PNAGTYQEVLYGLLD+G+ IEARDCM RMI D MDPSFVSYKKLLSGLCKKNLT+DVDWV
Sbjct: 301 PNAGTYQEVLYGLLDTGKFIEARDCMHRMISDGMDPSFVSYKKLLSGLCKKNLTQDVDWV 360

Query: 361 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 403
           LKQMVMQGFVPK+ MWK ILRC+L+GNE+  + T  V EK++
Sbjct: 361 LKQMVMQGFVPKVGMWKVILRCVLSGNEECIDITDDVFEKVV 402

[Close]
BLAST of CmoCh09G006840 vs. NCBI nr
Match: gi|702386938|ref|XP_010064884.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial-like [Eucalyptus grandis])

HSP 1 Score: 485.7 bits (1249), Expect = 7.7e-134
Identity = 220/337 (65.28%), Postives = 281/337 (83.38%), Query Frame = 1 

Query: 49  RLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFD 108
           RL H+DWL+PNE+IKII+ +RDP +++  ++++  RKDYKPN+ ++T+ ++RLA   +FD
Sbjct: 31  RLDHKDWLAPNEIIKIIKILRDPNSIIRALNRYEKRKDYKPNEALFTMAINRLARAEMFD 90

Query: 109 DIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNF 168
            IE ++ RI  ER  RLSDEFFY+VIKIYGN+AGRI +AIETL+DMP Y+ WPSVK FN+
Sbjct: 91  PIEDIVRRIVKERPCRLSDEFFYNVIKIYGNMAGRINRAIETLYDMPKYDVWPSVKCFNY 150

Query: 169 VLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQK 228
           VLNLLVS K+FDVVHEVYM  P+LGIE+DACCLNILIKGLC++G+L AA ++ DEFP+Q+
Sbjct: 151 VLNLLVSWKLFDVVHEVYMRGPRLGIEVDACCLNILIKGLCKNGSLEAAFQMLDEFPKQR 210

Query: 229 CRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAI 288
           CRPNV+TFSTLMH LC+ G+++ A  L  RMENEG+ PDTITFNILISGLRKQ+R+EEA+
Sbjct: 211 CRPNVKTFSTLMHGLCERGKVDDAKALLDRMENEGIFPDTITFNILISGLRKQERVEEAM 270

Query: 289 ELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGL 348
           ELL+RMKLKGC PNAG+YQEVLYGLLD GR +EA++ M  MI   ++PSFVSYK ++ GL
Sbjct: 271 ELLERMKLKGCQPNAGSYQEVLYGLLDEGRFVEAKEFMAEMISTGINPSFVSYKSVIGGL 330

Query: 349 CKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLA 386
           CK+ L  DVDWVLK+M+ QGFVPKM MW+ IL+ M +
Sbjct: 331 CKEKLVGDVDWVLKRMIEQGFVPKMGMWRQILQSMFS 367

[Close]
BLAST of CmoCh09G006840 vs. NCBI nr
Match: gi|568848270|ref|XP_006477941.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Citrus sinensis])

HSP 1 Score: 478.0 bits (1229), Expect = 1.6e-131
Identity = 228/378 (60.32%), Postives = 293/378 (77.51%), Query Frame = 1 

Query: 12  SVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNEVIKIIQQIRDP 71
           S++ S+  SS+S+I  +   +  S S S + S    ++L+H+DWLSP EV+KI   +RDP
Sbjct: 14  SIIQSL--SSASTITRKRTFALASPSASHQDSDHHVYKLNHKDWLSPTEVLKIFSNLRDP 73

Query: 72  PAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFY 131
            +V++ ++Q+S RKDY PN+ +YTL++++LA+   FD IE +M RIK E+  R SD FFY
Sbjct: 74  ISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFY 133

Query: 132 HVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPK 191
           +VIKIYGN+AGRIGKAIETLFDMP+YNCWPSVKTFN VLNLLVSAK++  +  +Y  A K
Sbjct: 134 NVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAK 193

Query: 192 LGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELER 251
           LG+EIDACCLNIL+KGLCE+GNL AA  V DEFP+Q C PNVRTFSTLMH LC+ G +E 
Sbjct: 194 LGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEE 253

Query: 252 ASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLY 311
           A  L  RME+EG+  DT+TFNILISGLRKQ ++EE ++LL+RMK KGCYPN+ +YQEVLY
Sbjct: 254 AFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGMKLLERMKGKGCYPNSASYQEVLY 313

Query: 312 GLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVP 371
           GLLD  R  EA++ + RMI +RM PSFVSYKKL+ GLC + L EDVDWVLK+MV QGFVP
Sbjct: 314 GLLDKKRFPEAKELVGRMICERMSPSFVSYKKLIHGLCNQKLVEDVDWVLKKMVQQGFVP 373

Query: 372 KMEMWKAILRCMLAGNED 390
           +M MW+ I+ C+  G ++
Sbjct: 374 RMGMWREIVGCVTFGKDN 389

[Close]
BLAST of CmoCh09G006840 vs. NCBI nr
Match: gi|645239806|ref|XP_008226304.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Prunus mume])

HSP 1 Score: 478.0 bits (1229), Expect = 1.6e-131
Identity = 236/372 (63.44%), Postives = 285/372 (76.61%), Query Frame = 1 

Query: 15  NSIFSSSSSSIPLRLPSSSFSFSTSPKQSSA-LPHRLSHRDWLSPNEVIKIIQQIRDPPA 74
           N IF   + S  ++ PS    FST P  SS+ +P RL H+DWL+PNEV+++   +RDP +
Sbjct: 11  NPIFFRLTHSTTIKNPS----FSTLPSSSSSDIPKRLHHKDWLAPNEVLEVFTSLRDPNS 70

Query: 75  VLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHV 134
           V   +  +S RKDYKPN+ +YTLVV++LA+  LFD I+ VM RIKSE   RLSD FF  V
Sbjct: 71  VRTALDHYSKRKDYKPNEALYTLVVNKLAQARLFDAIDNVMARIKSESKCRLSDNFFRTV 130

Query: 135 IKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLG 194
           IK YGNV G I KAIETL+DMPNY CWPSVKTFNFVL+LLVS KMFDVVHEVY+ APKLG
Sbjct: 131 IKAYGNVGGLISKAIETLYDMPNYGCWPSVKTFNFVLHLLVSTKMFDVVHEVYLEAPKLG 190

Query: 195 IEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERAS 254
           IEIDACCLNILIKGLCE G L+AALKV DEFP+Q+C PN  TFSTLMH LC NG+++ A 
Sbjct: 191 IEIDACCLNILIKGLCEYGKLDAALKVLDEFPKQRCMPNALTFSTLMHGLCVNGKVDEAF 250

Query: 255 ELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGL 314
            +  RMENEG+ PD ITFNILI+GLRKQ R EE I+LL+ M+ KGC PNAG+YQEVLY  
Sbjct: 251 GMLKRMENEGIDPDAITFNILIAGLRKQGRSEEGIKLLEEMRGKGCDPNAGSYQEVLYCF 310

Query: 315 LDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKM 374
           LD+ R +EA++ M  MI   + PSFVSYK L+ GLCK+NL +DVDWVLKQM+ QGF+PKM
Sbjct: 311 LDAQRFVEAKEFMSWMISKGIGPSFVSYKALIHGLCKENLVQDVDWVLKQMIRQGFLPKM 370

Query: 375 EMWKAILRCMLA 386
            MW+ IL+ M +
Sbjct: 371 GMWRQILKSMFS 378

The following BLAST results are available for this feature:
BLAST of CmoCh09G006840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP230_ARATH8.0e-12355.44Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidop... [more]
PP418_ARATH1.5e-4128.96Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN... [more]
PP298_ARATH3.0e-3726.26Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
PPR20_ARATH5.1e-3728.20Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidop... [more]
PP327_ARATH1.5e-3627.60Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN... [more]
BLAST of CmoCh09G006840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZE4_CUCSA5.3e-19884.58Uncharacterized protein OS=Cucumis sativus GN=Csa_4G621180 PE=4 SV=1[more]
A0A059BUE5_EUCGR5.4e-13465.28Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03214 PE=4 SV=1[more]
V4TUT4_9ROSI9.4e-13160.05Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020422mg PE=4 SV=1[more]
A0A067EEL2_CITSI1.2e-13059.79Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015590mg PE=4 SV=1[more]
F6GX44_VITVI2.6e-12858.87Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0138g00130 PE=4 SV=... [more]
BLAST of CmoCh09G006840 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G14580.14.5e-12455.44 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G46100.18.7e-4328.96 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G07740.12.9e-3828.20 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G20090.18.4e-3827.60 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G74580.18.7e-3526.46 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmoCh09G006840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456671|ref|XP_004146072.1|7.5e-19884.58PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial ... [more]
gi|659127375|ref|XP_008463670.1|2.7e-19583.58PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial ... [more]
gi|702386938|ref|XP_010064884.1|7.7e-13465.28PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial-... [more]
gi|568848270|ref|XP_006477941.1|1.6e-13160.32PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial ... [more]
gi|645239806|ref|XP_008226304.1|1.6e-13163.44PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G006840.1CmoCh09G006840.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 339..369
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 266..313
score: 8.3E-13coord: 197..245
score: 3.7
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 235..268
score: 5.0E-9coord: 269..303
score: 1.3E-10coord: 200..233
score: 1.1E-7coord: 339..371
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 337..371
score: 10.073coord: 302..336
score: 8.21coord: 126..161
score: 6.292coord: 232..266
score: 12.912coord: 162..196
score: 6.785coord: 197..231
score: 10.928coord: 267..301
score: 1
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 2..393
score: 4.4E
NoneNo IPR availablePANTHERPTHR24015:SF740SUBFAMILY NOT NAMEDcoord: 2..393
score: 4.4E