CmoCh09G006640 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCAGAAGTTTGAATTTATCGATTCCATCTGGGTTTATCAATTCTTCGAAAACCCAACAAAATTTCAAGTTTGTTTCTTTACCTTCTCCTCTAATTTTCAGAGCACCCAAGTACGAAAAGCTTTCATCGTCTTCTATCCGTGCTATGGGCTCCTCATCCTCTTCACAGCGACCAGATGGTATCCGAGGTTTTTCCTTTTCCTTTCTTTTCATTATCAAATCTTGCTCTAAACTGTATGATAAAATGAATTCAAGTAATGAATATCCATGGCATGGCACGAGAAATTTACAGTAAGGGAGAATTTCTCTTACCAATTTGCTGTATTGAACATTGAAGAAGCTTAGTTGTCTGTTGGTGCAGAGGCTGGCACCGCGGATTACAAATCTCTTAGCGATGATGAATGGAAGAAGCGGCTCACAAGCGAGCAGTTTTATATTACCCGTCAGAAGGGAACTGAGAGAGCTTTTACTGGGTATAATCCAATAAATATCTTCGATATAAAACATGTAAACATGTAAACATGTGAGATCCCACCTCTGTTGGAGAGAACGAAACACTTTTTATAAGAGTGTAAAAACCTTTTCCTAGCATACGCATTTTAAAATCCTTGAAGGGAAGCTCGGAAGTGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGGGCTTGAGCTATAACAAATGACATCAAAGCCAAGACACCGGGCATTGTGCTAGCAAGGAGGCTGAGTCCTGAAGAGGGTGGACACGAGTCGATGTGCTAGTAAAGATGTTGGGCTCCGAAGGAGGGTAGATTTGGTGGGGTCCCACATCGATGGAAGAAAGAAATGAGTGTCAGCGAAGGAGAATGAATTGTGAGATCCCATTCAGTTGGGAAGGAGAATGAAGCACCCTTTAGAAGAGTGTGAAACCTCTCCCTAGCATATGCATTTTAAAACCTTGAGGGGAAGCCCGAAAGAAAAAGTCCATAGAGAGCAATATTTGCTAGCGGTGGATTTGGGCTGTTACAATGGGGAGGGAACAAAACACCCTATATTAAGGACATGAAAACCTCTCCCTAGCAAACGCATTTTAAAAACTTGAAGGGAAGCCCAAAGAGGACAATATCGGCTAGCAGTGGGCTTAAACTGTTACAAAACGCCATACGAACATTTTGATCTATTTGATGACAATTCTATTCCAATGGTAAACTTTTTCCTTCAATTTCAGAGAGTATTGGAACACCAAAACGCCAGGGACTTACCAGTGCATATGTTGCAACACGCCTCTGTTTGAGTAAATATTTTGGCTCTTTCAACAACTTCTCTAAGCAAATGATTTTTCATAGAACTTCCAGTAACATGTAAAATTCTCTCTTCAGATCATCCACTAAATTTGACAGTGGAACTGGTTGGCCATCGTATTACCAGCCCATTGGTGATAATGTCAAAACCAAGCTAGACCTGTCCATTATTTTCATGCCTCGAGAGGAAGTTCTTTGTGCTGCTTGTGATGCTCATCTGGGCCATGTATTTGATGATGGACCGCCGCCAACTGGGAAGCGTTACTGCATCAATAGGTATGTTGCTGTTACTAGCTCATTCTGCTTGTGTGTCTACTAATTTCTAGAACTGAATTGTGTATGAAACTCTCTGCAGTGCTGCACTGAAATTGAAGCCGAAATAAGCGAAGGTGAAGATATTACTATGCCTGCCTGCAAATTCTGTAACTCATACTCATTACATGTTTGTGCACATAAACTAAGGATTCTTGCTAGATGTATAAGTTTATTGTGCTGAATGGAAATAATTGTACCTTTTAGTGTCGTTGTTTAATGTGATAGATCCCTGTCTTGAGTAATTGTTCCAGATATACTTGAACTAGATAGGACACAAGCTGAGCAAGTGTGTGGACAAATTGGTTCTGAGCTGAA ATGGCTTCCAGAAGTTTGAATTTATCGATTCCATCTGGGTTTATCAATTCTTCGAAAACCCAACAAAATTTCAAGTTTGTTTCTTTACCTTCTCCTCTAATTTTCAGAGCACCCAAGTACGAAAAGCTTTCATCGTCTTCTATCCGTGCTATGGGCTCCTCATCCTCTTCACAGCGACCAGATGGTATCCGAGAGGCTGGCACCGCGGATTACAAATCTCTTAGCGATGATGAATGGAAGAAGCGGCTCACAAGCGAGCAGTTTTATATTACCCGTCAGAAGGGAACTGAGAGAGCTTTTACTGGAGAGTATTGGAACACCAAAACGCCAGGGACTTACCAGTGCATATGTTGCAACACGCCTCTGTTTGAATCATCCACTAAATTTGACAGTGGAACTGGTTGGCCATCGTATTACCAGCCCATTGGTGATAATGTCAAAACCAAGCTAGACCTGTCCATTATTTTCATGCCTCGAGAGGAAGTTCTTTGTGCTGCTTGTGATGCTCATCTGGGCCATGTATTTGATGATGGACCGCCGCCAACTGGGAAGCGTTACTGCATCAATAGTGCTGCACTGAAATTGAAGCCGAAATAAGCGAAGGTGAAGATATTACTATGCCTGCCTGCAAATTCTGTAACTCATACTCATTACATGTTTGTGCACATAAACTAAGGATTCTTGCTAGATGTATAAGTTTATTGTGCTGAATGGAAATAATTGTACCTTTTAGTGTCGTTGTTTAATGTGATAGATCCCTGTCTTGAGTAATTGTTCCAGATATACTTGAACTAGATAGGACACAAGCTGAGCAAGTGTGTGGACAAATTGGTTCTGAGCTGAA ATGGCTTCCAGAAGTTTGAATTTATCGATTCCATCTGGGTTTATCAATTCTTCGAAAACCCAACAAAATTTCAAGTTTGTTTCTTTACCTTCTCCTCTAATTTTCAGAGCACCCAAGTACGAAAAGCTTTCATCGTCTTCTATCCGTGCTATGGGCTCCTCATCCTCTTCACAGCGACCAGATGGTATCCGAGAGGCTGGCACCGCGGATTACAAATCTCTTAGCGATGATGAATGGAAGAAGCGGCTCACAAGCGAGCAGTTTTATATTACCCGTCAGAAGGGAACTGAGAGAGCTTTTACTGGAGAGTATTGGAACACCAAAACGCCAGGGACTTACCAGTGCATATGTTGCAACACGCCTCTGTTTGAATCATCCACTAAATTTGACAGTGGAACTGGTTGGCCATCGTATTACCAGCCCATTGGTGATAATGTCAAAACCAAGCTAGACCTGTCCATTATTTTCATGCCTCGAGAGGAAGTTCTTTGTGCTGCTTGTGATGCTCATCTGGGCCATGTATTTGATGATGGACCGCCGCCAACTGGGAAGCGTTACTGCATCAATAGTGCTGCACTGAAATTGAAGCCGAAATAA
BLAST of CmoCh09G006640 vs. Swiss-Prot
Match: MSRB1_ARATH (Peptide methionine sulfoxide reductase B1, chloroplastic OS=Arabidopsis thaliana GN=MSRB1 PE=1 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.2e-71 Identity = 130/195 (66.67%), Postives = 158/195 (81.03%), Query Frame = 1
BLAST of CmoCh09G006640 vs. Swiss-Prot
Match: MSRB1_ORYSJ (Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRB1 PE=2 SV=2) HSP 1 Score: 256.1 bits (653), Expect = 3.1e-67 Identity = 123/162 (75.93%), Postives = 136/162 (83.95%), Query Frame = 1
BLAST of CmoCh09G006640 vs. Swiss-Prot
Match: MSRB_THEEB (Peptide methionine sulfoxide reductase MsrB OS=Thermosynechococcus elongatus (strain BP-1) GN=msrB PE=3 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.0e-46 Identity = 83/125 (66.40%), Postives = 100/125 (80.00%), Query Frame = 1
BLAST of CmoCh09G006640 vs. Swiss-Prot
Match: MSRB_ACAM1 (Peptide methionine sulfoxide reductase MsrB OS=Acaryochloris marina (strain MBIC 11017) GN=msrB PE=3 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 5.2e-43 Identity = 81/125 (64.80%), Postives = 95/125 (76.00%), Query Frame = 1
BLAST of CmoCh09G006640 vs. Swiss-Prot
Match: MSRB_PSEPF (Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas fluorescens (strain Pf0-1) GN=msrB PE=3 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.4e-40 Identity = 75/122 (61.48%), Postives = 86/122 (70.49%), Query Frame = 1
BLAST of CmoCh09G006640 vs. TrEMBL
Match: A0A0A0L4I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622800 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 7.3e-92 Identity = 168/199 (84.42%), Postives = 182/199 (91.46%), Query Frame = 1
BLAST of CmoCh09G006640 vs. TrEMBL
Match: F2YS22_CARPA (Chloroplast methionine sulfoxide reductase B1 (Fragment) OS=Carica papaya PE=2 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 9.2e-79 Identity = 145/200 (72.50%), Postives = 168/200 (84.00%), Query Frame = 1
BLAST of CmoCh09G006640 vs. TrEMBL
Match: F6H2J9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00170 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.2e-78 Identity = 156/204 (76.47%), Postives = 170/204 (83.33%), Query Frame = 1
BLAST of CmoCh09G006640 vs. TrEMBL
Match: A0A067JL74_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25702 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 5.1e-77 Identity = 145/198 (73.23%), Postives = 164/198 (82.83%), Query Frame = 1
BLAST of CmoCh09G006640 vs. TrEMBL
Match: A0A067D491_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028408mg PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 2.5e-76 Identity = 144/196 (73.47%), Postives = 164/196 (83.67%), Query Frame = 1
BLAST of CmoCh09G006640 vs. TAIR10
Match: AT1G53670.1 (AT1G53670.1 methionine sulfoxide reductase B 1) HSP 1 Score: 270.8 bits (691), Expect = 6.7e-73 Identity = 130/195 (66.67%), Postives = 158/195 (81.03%), Query Frame = 1
BLAST of CmoCh09G006640 vs. TAIR10
Match: AT4G04830.1 (AT4G04830.1 methionine sulfoxide reductase B5) HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26 Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = 1
BLAST of CmoCh09G006640 vs. TAIR10
Match: AT4G04800.1 (AT4G04800.1 methionine sulfoxide reductase B3) HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26 Identity = 56/124 (45.16%), Postives = 76/124 (61.29%), Query Frame = 1
BLAST of CmoCh09G006640 vs. TAIR10
Match: AT4G21860.1 (AT4G21860.1 methionine sulfoxide reductase B 2) HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26 Identity = 68/170 (40.00%), Postives = 93/170 (54.71%), Query Frame = 1
BLAST of CmoCh09G006640 vs. TAIR10
Match: AT4G21850.1 (AT4G21850.1 methionine sulfoxide reductase B9) HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25 Identity = 54/121 (44.63%), Postives = 72/121 (59.50%), Query Frame = 1
BLAST of CmoCh09G006640 vs. NCBI nr
Match: gi|659103010|ref|XP_008452427.1| (PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 350.1 bits (897), Expect = 2.5e-93 Identity = 170/198 (85.86%), Postives = 181/198 (91.41%), Query Frame = 1
BLAST of CmoCh09G006640 vs. NCBI nr
Match: gi|778695599|ref|XP_004146010.2| (PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 344.7 bits (883), Expect = 1.0e-91 Identity = 168/199 (84.42%), Postives = 182/199 (91.46%), Query Frame = 1
BLAST of CmoCh09G006640 vs. NCBI nr
Match: gi|327387767|gb|AEA72443.1| (chloroplast methionine sulfoxide reductase B1, partial [Carica papaya]) HSP 1 Score: 301.2 bits (770), Expect = 1.3e-78 Identity = 145/200 (72.50%), Postives = 168/200 (84.00%), Query Frame = 1
BLAST of CmoCh09G006640 vs. NCBI nr
Match: gi|225461830|ref|XP_002285647.1| (PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic [Vitis vinifera]) HSP 1 Score: 300.8 bits (769), Expect = 1.7e-78 Identity = 156/204 (76.47%), Postives = 170/204 (83.33%), Query Frame = 1
BLAST of CmoCh09G006640 vs. NCBI nr
Match: gi|802749959|ref|XP_012087688.1| (PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic [Jatropha curcas]) HSP 1 Score: 295.4 bits (755), Expect = 7.3e-77 Identity = 145/198 (73.23%), Postives = 164/198 (82.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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