CmoCh09G006640 (gene) Cucurbita moschata (Rifu)

NameCmoCh09G006640
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPeptide methionine sulfoxide reductase msrB
LocationCmo_Chr09 : 3328923 .. 3330837 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAGAAGTTTGAATTTATCGATTCCATCTGGGTTTATCAATTCTTCGAAAACCCAACAAAATTTCAAGTTTGTTTCTTTACCTTCTCCTCTAATTTTCAGAGCACCCAAGTACGAAAAGCTTTCATCGTCTTCTATCCGTGCTATGGGCTCCTCATCCTCTTCACAGCGACCAGATGGTATCCGAGGTTTTTCCTTTTCCTTTCTTTTCATTATCAAATCTTGCTCTAAACTGTATGATAAAATGAATTCAAGTAATGAATATCCATGGCATGGCACGAGAAATTTACAGTAAGGGAGAATTTCTCTTACCAATTTGCTGTATTGAACATTGAAGAAGCTTAGTTGTCTGTTGGTGCAGAGGCTGGCACCGCGGATTACAAATCTCTTAGCGATGATGAATGGAAGAAGCGGCTCACAAGCGAGCAGTTTTATATTACCCGTCAGAAGGGAACTGAGAGAGCTTTTACTGGGTATAATCCAATAAATATCTTCGATATAAAACATGTAAACATGTAAACATGTGAGATCCCACCTCTGTTGGAGAGAACGAAACACTTTTTATAAGAGTGTAAAAACCTTTTCCTAGCATACGCATTTTAAAATCCTTGAAGGGAAGCTCGGAAGTGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGGGCTTGAGCTATAACAAATGACATCAAAGCCAAGACACCGGGCATTGTGCTAGCAAGGAGGCTGAGTCCTGAAGAGGGTGGACACGAGTCGATGTGCTAGTAAAGATGTTGGGCTCCGAAGGAGGGTAGATTTGGTGGGGTCCCACATCGATGGAAGAAAGAAATGAGTGTCAGCGAAGGAGAATGAATTGTGAGATCCCATTCAGTTGGGAAGGAGAATGAAGCACCCTTTAGAAGAGTGTGAAACCTCTCCCTAGCATATGCATTTTAAAACCTTGAGGGGAAGCCCGAAAGAAAAAGTCCATAGAGAGCAATATTTGCTAGCGGTGGATTTGGGCTGTTACAATGGGGAGGGAACAAAACACCCTATATTAAGGACATGAAAACCTCTCCCTAGCAAACGCATTTTAAAAACTTGAAGGGAAGCCCAAAGAGGACAATATCGGCTAGCAGTGGGCTTAAACTGTTACAAAACGCCATACGAACATTTTGATCTATTTGATGACAATTCTATTCCAATGGTAAACTTTTTCCTTCAATTTCAGAGAGTATTGGAACACCAAAACGCCAGGGACTTACCAGTGCATATGTTGCAACACGCCTCTGTTTGAGTAAATATTTTGGCTCTTTCAACAACTTCTCTAAGCAAATGATTTTTCATAGAACTTCCAGTAACATGTAAAATTCTCTCTTCAGATCATCCACTAAATTTGACAGTGGAACTGGTTGGCCATCGTATTACCAGCCCATTGGTGATAATGTCAAAACCAAGCTAGACCTGTCCATTATTTTCATGCCTCGAGAGGAAGTTCTTTGTGCTGCTTGTGATGCTCATCTGGGCCATGTATTTGATGATGGACCGCCGCCAACTGGGAAGCGTTACTGCATCAATAGGTATGTTGCTGTTACTAGCTCATTCTGCTTGTGTGTCTACTAATTTCTAGAACTGAATTGTGTATGAAACTCTCTGCAGTGCTGCACTGAAATTGAAGCCGAAATAAGCGAAGGTGAAGATATTACTATGCCTGCCTGCAAATTCTGTAACTCATACTCATTACATGTTTGTGCACATAAACTAAGGATTCTTGCTAGATGTATAAGTTTATTGTGCTGAATGGAAATAATTGTACCTTTTAGTGTCGTTGTTTAATGTGATAGATCCCTGTCTTGAGTAATTGTTCCAGATATACTTGAACTAGATAGGACACAAGCTGAGCAAGTGTGTGGACAAATTGGTTCTGAGCTGAA

mRNA sequence

ATGGCTTCCAGAAGTTTGAATTTATCGATTCCATCTGGGTTTATCAATTCTTCGAAAACCCAACAAAATTTCAAGTTTGTTTCTTTACCTTCTCCTCTAATTTTCAGAGCACCCAAGTACGAAAAGCTTTCATCGTCTTCTATCCGTGCTATGGGCTCCTCATCCTCTTCACAGCGACCAGATGGTATCCGAGAGGCTGGCACCGCGGATTACAAATCTCTTAGCGATGATGAATGGAAGAAGCGGCTCACAAGCGAGCAGTTTTATATTACCCGTCAGAAGGGAACTGAGAGAGCTTTTACTGGAGAGTATTGGAACACCAAAACGCCAGGGACTTACCAGTGCATATGTTGCAACACGCCTCTGTTTGAATCATCCACTAAATTTGACAGTGGAACTGGTTGGCCATCGTATTACCAGCCCATTGGTGATAATGTCAAAACCAAGCTAGACCTGTCCATTATTTTCATGCCTCGAGAGGAAGTTCTTTGTGCTGCTTGTGATGCTCATCTGGGCCATGTATTTGATGATGGACCGCCGCCAACTGGGAAGCGTTACTGCATCAATAGTGCTGCACTGAAATTGAAGCCGAAATAAGCGAAGGTGAAGATATTACTATGCCTGCCTGCAAATTCTGTAACTCATACTCATTACATGTTTGTGCACATAAACTAAGGATTCTTGCTAGATGTATAAGTTTATTGTGCTGAATGGAAATAATTGTACCTTTTAGTGTCGTTGTTTAATGTGATAGATCCCTGTCTTGAGTAATTGTTCCAGATATACTTGAACTAGATAGGACACAAGCTGAGCAAGTGTGTGGACAAATTGGTTCTGAGCTGAA

Coding sequence (CDS)

ATGGCTTCCAGAAGTTTGAATTTATCGATTCCATCTGGGTTTATCAATTCTTCGAAAACCCAACAAAATTTCAAGTTTGTTTCTTTACCTTCTCCTCTAATTTTCAGAGCACCCAAGTACGAAAAGCTTTCATCGTCTTCTATCCGTGCTATGGGCTCCTCATCCTCTTCACAGCGACCAGATGGTATCCGAGAGGCTGGCACCGCGGATTACAAATCTCTTAGCGATGATGAATGGAAGAAGCGGCTCACAAGCGAGCAGTTTTATATTACCCGTCAGAAGGGAACTGAGAGAGCTTTTACTGGAGAGTATTGGAACACCAAAACGCCAGGGACTTACCAGTGCATATGTTGCAACACGCCTCTGTTTGAATCATCCACTAAATTTGACAGTGGAACTGGTTGGCCATCGTATTACCAGCCCATTGGTGATAATGTCAAAACCAAGCTAGACCTGTCCATTATTTTCATGCCTCGAGAGGAAGTTCTTTGTGCTGCTTGTGATGCTCATCTGGGCCATGTATTTGATGATGGACCGCCGCCAACTGGGAAGCGTTACTGCATCAATAGTGCTGCACTGAAATTGAAGCCGAAATAA
BLAST of CmoCh09G006640 vs. Swiss-Prot
Match: MSRB1_ARATH (Peptide methionine sulfoxide reductase B1, chloroplastic OS=Arabidopsis thaliana GN=MSRB1 PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-71
Identity = 130/195 (66.67%), Postives = 158/195 (81.03%), Query Frame = 1

Query: 1   MASRSLNLSIPSGFINSSKTQQNFKFVSLPSPLIFRAPKYEKLSSSSIRAMGSSSSSQRP 60
           MAS +    I S F+ S++T+ N+   +  S    R+    +  S S+ +MGSSSSS +P
Sbjct: 1   MASSTRLTIIQSSFV-SARTRLNYVSKTNHSGFACRSLSKPRNLSLSVYSMGSSSSSPKP 60

Query: 61  DGIREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCNT 120
           D ++EA   ++ SLS++EWKKRLT EQ+YITRQKGTERAFTGEYWN+KTPG Y C+CC+T
Sbjct: 61  DNVQEAEKNEFASLSENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDT 120

Query: 121 PLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDGPP 180
           PLF+SSTKFDSGTGWPSYYQPIG+NVKTKLDLSIIFMPR+EV+CA C+AHLGHVFDDGP 
Sbjct: 121 PLFDSSTKFDSGTGWPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAHLGHVFDDGPR 180

Query: 181 PTGKRYCINSAALKL 196
           PTGKRYC+NSAALKL
Sbjct: 181 PTGKRYCLNSAALKL 194

BLAST of CmoCh09G006640 vs. Swiss-Prot
Match: MSRB1_ORYSJ (Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRB1 PE=2 SV=2)

HSP 1 Score: 256.1 bits (653), Expect = 3.1e-67
Identity = 123/162 (75.93%), Postives = 136/162 (83.95%), Query Frame = 1

Query: 46  SSIRAMG-------SSSSSQRPDGIREA---GTADYK-SLSDDEWKKRLTSEQFYITRQK 105
           +S+RAMG       SSSSS  P G  +A   G  +Y  SL+D+EW+KRLT +Q+YITRQK
Sbjct: 50  ASVRAMGAASSSSSSSSSSPSPQGQAQAQAQGKPNYSTSLTDEEWRKRLTKDQYYITRQK 109

Query: 106 GTERAFTGEYWNTKTPGTYQCICCNTPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSI 165
           GTERAFTGEYWNTKTPG Y C+CC+TPLFESSTKFDSGTGWPSYYQPIGDNVK KLD+SI
Sbjct: 110 GTERAFTGEYWNTKTPGIYHCVCCDTPLFESSTKFDSGTGWPSYYQPIGDNVKCKLDMSI 169

Query: 166 IFMPREEVLCAACDAHLGHVFDDGPPPTGKRYCINSAALKLK 197
           IFMPR EVLCA CDAHLGHVFDDGP PTGKRYCINSA+LKLK
Sbjct: 170 IFMPRTEVLCAVCDAHLGHVFDDGPRPTGKRYCINSASLKLK 211

BLAST of CmoCh09G006640 vs. Swiss-Prot
Match: MSRB_THEEB (Peptide methionine sulfoxide reductase MsrB OS=Thermosynechococcus elongatus (strain BP-1) GN=msrB PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.0e-46
Identity = 83/125 (66.40%), Postives = 100/125 (80.00%), Query Frame = 1

Query: 75  SDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCNTPLFESSTKFDSGTG 134
           +D EW+ +LT EQ+Y+TR+KGTERAFTG YWN K PG Y C+CC TPLF S TK+DSGTG
Sbjct: 7   TDAEWQAQLTPEQYYVTRKKGTERAFTGCYWNNKKPGLYSCVCCGTPLFRSETKYDSGTG 66

Query: 135 WPSYYQPIG-DNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDGPPPTGKRYCINSAAL 194
           WPS++QP+  +N++ + DLS   M R EVLCA CDAHLGHVF+DGPPPTG RYCINSAAL
Sbjct: 67  WPSFWQPLDPNNIRMERDLS-HGMVRTEVLCAVCDAHLGHVFEDGPPPTGLRYCINSAAL 126

Query: 195 KLKPK 199
              P+
Sbjct: 127 AFVPE 130

BLAST of CmoCh09G006640 vs. Swiss-Prot
Match: MSRB_ACAM1 (Peptide methionine sulfoxide reductase MsrB OS=Acaryochloris marina (strain MBIC 11017) GN=msrB PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.2e-43
Identity = 81/125 (64.80%), Postives = 95/125 (76.00%), Query Frame = 1

Query: 75  SDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCNTPLFESSTKFDSGTG 134
           ++ EW+ +LT EQF +TR  GTERAFTGEY + K  GTYQC+CC T LF S TKFDSGTG
Sbjct: 7   TEQEWEAQLTPEQFRVTRHHGTERAFTGEYHDLKAAGTYQCVCCGTELFTSDTKFDSGTG 66

Query: 135 WPSYYQPIGD-NVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDGPPPTGKRYCINSAAL 194
           WPS++ P    +V+ K D S+ FM R EVLCA CDAHLGHVF+DGP PTG RYC+NSAAL
Sbjct: 67  WPSFWAPADKTHVEEKTDRSL-FMVRTEVLCAVCDAHLGHVFNDGPKPTGLRYCMNSAAL 126

Query: 195 KLKPK 199
           K  PK
Sbjct: 127 KFVPK 130

BLAST of CmoCh09G006640 vs. Swiss-Prot
Match: MSRB_PSEPF (Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas fluorescens (strain Pf0-1) GN=msrB PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-40
Identity = 75/122 (61.48%), Postives = 86/122 (70.49%), Query Frame = 1

Query: 77  DEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCNTPLFESSTKFDSGTGWP 136
           +EW+  L  EQF + R   TER F+G+Y  TKT G Y CICCN PLF+S TKFDSG GWP
Sbjct: 9   EEWRAMLDPEQFNVCRLSATERPFSGKYNATKTDGVYHCICCNEPLFDSKTKFDSGCGWP 68

Query: 137 SYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDGPPPTGKRYCINSAALKLK 196
           S+Y PIGDN  T++  +   M R EV CA CDAHLGHVF DGPPPTG RYCINS  L L 
Sbjct: 69  SFYAPIGDNAMTEIRDTSHGMIRTEVKCAKCDAHLGHVFPDGPPPTGLRYCINSVCLDLV 128

Query: 197 PK 199
           P+
Sbjct: 129 PR 130

BLAST of CmoCh09G006640 vs. TrEMBL
Match: A0A0A0L4I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622800 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 7.3e-92
Identity = 168/199 (84.42%), Postives = 182/199 (91.46%), Query Frame = 1

Query: 1   MASRSLNLS-IPSGFINSSKTQQNFKFVSLPSPLIFRAPKYEKLSSSSIRAMG-SSSSSQ 60
           MA+RSLNLS +P+GFI++SKTQQ+F FVS  SP  FRA K +KLSSSS R MG SSSSSQ
Sbjct: 4   MAARSLNLSFLPTGFISTSKTQQSFNFVSFSSPPSFRAIKNKKLSSSSTRVMGCSSSSSQ 63

Query: 61  RPDGIREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICC 120
           +PDGI+EAGT +YKSLSDDEWKKRLT EQFYITRQKGTERAFTGEYWNTKT G Y CICC
Sbjct: 64  KPDGIKEAGTVNYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGIYHCICC 123

Query: 121 NTPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDG 180
           +TPLFESSTKFDSGTGWPSYYQP+GDNVK+KLDLSIIFMPREEVLCA CDAHLGHVF+DG
Sbjct: 124 DTPLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFNDG 183

Query: 181 PPPTGKRYCINSAALKLKP 198
           PPPTGKRYCINSAALKLKP
Sbjct: 184 PPPTGKRYCINSAALKLKP 202

BLAST of CmoCh09G006640 vs. TrEMBL
Match: F2YS22_CARPA (Chloroplast methionine sulfoxide reductase B1 (Fragment) OS=Carica papaya PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 9.2e-79
Identity = 145/200 (72.50%), Postives = 168/200 (84.00%), Query Frame = 1

Query: 1   MASRSLNLSIPSGFINSSKTQQNFKFVSLPSPLIFRAPKYEKLSS--SSIRAMGSSSSSQ 60
           MASR  NLS+P+  + SS T      +   S ++ R P  +K +S  S IR+MGSS+SSQ
Sbjct: 1   MASR--NLSVPTATLISSSTSCIDSGIKSSSFVLTRFPPLQKRASLFSCIRSMGSSASSQ 60

Query: 61  RPDGIREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICC 120
           +PD +++AG  DY S +DDEWKKRLT EQFYITRQKGTERAFTGEYWNTKTPGTY CICC
Sbjct: 61  KPDSVQDAGKIDYASWTDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTPGTYHCICC 120

Query: 121 NTPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDG 180
           +TPLFESSTKFDSGTGWPSYY+P+G+NVK+KLDLSIIFMPR+EVLC+ CDAHLGHVFDDG
Sbjct: 121 DTPLFESSTKFDSGTGWPSYYEPVGNNVKSKLDLSIIFMPRQEVLCSVCDAHLGHVFDDG 180

Query: 181 PPPTGKRYCINSAALKLKPK 199
           PPPTGKRYCINSAAL+LKPK
Sbjct: 181 PPPTGKRYCINSAALRLKPK 198

BLAST of CmoCh09G006640 vs. TrEMBL
Match: F6H2J9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00170 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-78
Identity = 156/204 (76.47%), Postives = 170/204 (83.33%), Query Frame = 1

Query: 1   MASRSL-NLSIPSGFINSSKTQQNF----KFVSLPSPLIFRAPKYEKLSSSSIRAMGSS- 60
           MASRSL NLS P+  + SSKTQ  F    +FVS    L  R P  +K S+   R MGSS 
Sbjct: 1   MASRSLGNLSFPTQHV-SSKTQFVFGSKPQFVSFSGAL--RKPVRQKFST---RVMGSSA 60

Query: 61  SSSQRPDGIREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQ 120
           SSSQ+PD I+E G  DY S+SD+EWKKRLT EQFYITRQKGTERAFTGEYWNTKTPG Y 
Sbjct: 61  SSSQKPDSIQEPGKVDYTSISDEEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTPGAYH 120

Query: 121 CICCNTPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHV 180
           CICC+TPLFESSTKFDSGTGWPSYYQPIG+NVK+KLDLSIIFMPR+EVLCAACDAHLGHV
Sbjct: 121 CICCDTPLFESSTKFDSGTGWPSYYQPIGNNVKSKLDLSIIFMPRQEVLCAACDAHLGHV 180

Query: 181 FDDGPPPTGKRYCINSAALKLKPK 199
           FDDGPPPTGKRYCINSA+LKLKPK
Sbjct: 181 FDDGPPPTGKRYCINSASLKLKPK 198

BLAST of CmoCh09G006640 vs. TrEMBL
Match: A0A067JL74_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25702 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.1e-77
Identity = 145/198 (73.23%), Postives = 164/198 (82.83%), Query Frame = 1

Query: 5   SLNLSIPSGFINSSKTQ----QNFKFVSLPSPLIFRAPKYEKLSSSSIRAMGSSSSSQRP 64
           S++ S  +    S KTQ     N K ++LP+   F  PK     S S+RAMGSS+SSQRP
Sbjct: 6   SISTSTNASSFISWKTQFQNPVNSKLLALPAAA-FGVPKRV---SFSLRAMGSSASSQRP 65

Query: 65  DGIREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCNT 124
           D I+EAG  DY S++DDEWKKRLT+EQ+YITRQKGTERAFTGEYWNTKTPGTY CICC+T
Sbjct: 66  DNIQEAGKVDYTSVADDEWKKRLTAEQYYITRQKGTERAFTGEYWNTKTPGTYHCICCDT 125

Query: 125 PLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDGPP 184
           PLFES TKFDSGTGWPSYYQP+G NVK+KLDLSIIFMPR+EV+CA CDAHLGHVFDDGPP
Sbjct: 126 PLFESFTKFDSGTGWPSYYQPVGSNVKSKLDLSIIFMPRQEVVCAVCDAHLGHVFDDGPP 185

Query: 185 PTGKRYCINSAALKLKPK 199
           PTGKRYCINSA+LKLKPK
Sbjct: 186 PTGKRYCINSASLKLKPK 199

BLAST of CmoCh09G006640 vs. TrEMBL
Match: A0A067D491_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028408mg PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.5e-76
Identity = 144/196 (73.47%), Postives = 164/196 (83.67%), Query Frame = 1

Query: 8   LSIPSGFINSSKTQ-----QNFKFVSLPSPLIFRAPKYEKLSSSSIRAMGSSSSSQRPDG 67
           +SIP+    S+ +Q     ++  FVS    L  R PK  ++S S IRAMGSS+SSQ+PD 
Sbjct: 10  MSIPTAMHISTLSQFESGVKSKLFVSASPSL--RRPK--RVSLSVIRAMGSSASSQKPDN 69

Query: 68  IREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCNTPL 127
           I+EA   DY S+SD+EWK+RLT EQ+YITRQKGTERAFTGEYWNTKTPGTY CICC+TPL
Sbjct: 70  IQEANRVDYASISDEEWKRRLTGEQYYITRQKGTERAFTGEYWNTKTPGTYHCICCDTPL 129

Query: 128 FESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDGPPPT 187
           FESSTKFDSGTGWPSYYQPIG N+K+KLDLSIIFMPR+EVLCA CDAHLGHVFDDGPPPT
Sbjct: 130 FESSTKFDSGTGWPSYYQPIGSNMKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDDGPPPT 189

Query: 188 GKRYCINSAALKLKPK 199
           GKRYCINSA+LKLKPK
Sbjct: 190 GKRYCINSASLKLKPK 201

BLAST of CmoCh09G006640 vs. TAIR10
Match: AT1G53670.1 (AT1G53670.1 methionine sulfoxide reductase B 1)

HSP 1 Score: 270.8 bits (691), Expect = 6.7e-73
Identity = 130/195 (66.67%), Postives = 158/195 (81.03%), Query Frame = 1

Query: 1   MASRSLNLSIPSGFINSSKTQQNFKFVSLPSPLIFRAPKYEKLSSSSIRAMGSSSSSQRP 60
           MAS +    I S F+ S++T+ N+   +  S    R+    +  S S+ +MGSSSSS +P
Sbjct: 1   MASSTRLTIIQSSFV-SARTRLNYVSKTNHSGFACRSLSKPRNLSLSVYSMGSSSSSPKP 60

Query: 61  DGIREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCNT 120
           D ++EA   ++ SLS++EWKKRLT EQ+YITRQKGTERAFTGEYWN+KTPG Y C+CC+T
Sbjct: 61  DNVQEAEKNEFASLSENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDT 120

Query: 121 PLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDGPP 180
           PLF+SSTKFDSGTGWPSYYQPIG+NVKTKLDLSIIFMPR+EV+CA C+AHLGHVFDDGP 
Sbjct: 121 PLFDSSTKFDSGTGWPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAHLGHVFDDGPR 180

Query: 181 PTGKRYCINSAALKL 196
           PTGKRYC+NSAALKL
Sbjct: 181 PTGKRYCLNSAALKL 194

BLAST of CmoCh09G006640 vs. TAIR10
Match: AT4G04830.1 (AT4G04830.1 methionine sulfoxide reductase B5)

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26
Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = 1

Query: 75  SDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCNTPLFESSTKFDSGTG 134
           +++EW+  L+ EQF I RQKGTE+  TGEY      G + C+ C TPL++S+TKFDSG G
Sbjct: 11  TEEEWRAVLSPEQFRILRQKGTEKPGTGEYDKFFEEGIFDCVGCKTPLYKSTTKFDSGCG 70

Query: 135 WPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVF--DDGPPPTGKRYCINSAA 194
           WP++++ +   +    D       R E+ CAACD HLGHVF  +    PT +R+C+NS +
Sbjct: 71  WPAFFEGLPGAINRTPDPD---GRRTEITCAACDGHLGHVFKGEGYGNPTDERHCVNSVS 130

Query: 195 LKLKP 198
           +   P
Sbjct: 131 ISFNP 132

BLAST of CmoCh09G006640 vs. TAIR10
Match: AT4G04800.1 (AT4G04800.1 methionine sulfoxide reductase B3)

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26
Identity = 56/124 (45.16%), Postives = 76/124 (61.29%), Query Frame = 1

Query: 76  DDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCNTPLFESSTKFDSGTGW 135
           D+EW+  L+ EQF I RQKGTE   TGEY N    G Y C+ CN PL++S+TKF++G GW
Sbjct: 51  DEEWRAILSPEQFRILRQKGTEYPGTGEYVNFDKEGVYGCVGCNAPLYKSTTKFNAGCGW 110

Query: 136 PSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVF--DDGPPPTGKRYCINSAAL 195
           P++++ I   +    D       R E+ CA C  HLGHVF  +    PT +R+C+NS +L
Sbjct: 111 PAFFEGIPGAITRTTDPD---GRRIEINCATCGGHLGHVFKGEGFATPTDERHCVNSVSL 170

Query: 196 KLKP 198
           K  P
Sbjct: 171 KFTP 171

BLAST of CmoCh09G006640 vs. TAIR10
Match: AT4G21860.1 (AT4G21860.1 methionine sulfoxide reductase B 2)

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26
Identity = 68/170 (40.00%), Postives = 93/170 (54.71%), Query Frame = 1

Query: 31  SPLIFRAPKYEKLSSSSIRAMGSSSSSQRPDGIREAGTADYKSLSDDEWKKRLTSEQFYI 90
           SPL F + +        I AMGSS+    P+ + +          ++EW+  L+ EQF I
Sbjct: 46  SPLSFPSLR-RGFHGGRIVAMGSSA----PESVNKP---------EEEWRAILSPEQFRI 105

Query: 91  TRQKGTERAFTGEYWNTKTPGTYQCICCNTPLFESSTKFDSGTGWPSYYQPIGDNVKTKL 150
            RQKGTE   TGEY      G Y C  C TPL++S+TKFDSG GWP+++  +   +    
Sbjct: 106 LRQKGTEYPGTGEYNKVFDDGIYCCAGCGTPLYKSTTKFDSGCGWPAFFDGLPGAITRTP 165

Query: 151 DLSIIFMPREEVLCAACDAHLGHVF--DDGPPPTGKRYCINSAALKLKPK 199
           D       R E+ CAAC  HLGHVF  +  P PT +R+C+NS +LK  P+
Sbjct: 166 DPD---GRRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSISLKFTPE 198

BLAST of CmoCh09G006640 vs. TAIR10
Match: AT4G21850.1 (AT4G21850.1 methionine sulfoxide reductase B9)

HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25
Identity = 54/121 (44.63%), Postives = 72/121 (59.50%), Query Frame = 1

Query: 76  DDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCNTPLFESSTKFDSGTGW 135
           D +W+  L+ EQF + R+KGTE    GEY      G Y C  C TPL++S+TKFDSG GW
Sbjct: 19  DQDWRAILSPEQFRVLREKGTENRGKGEYTKLFDDGIYSCAGCATPLYKSTTKFDSGCGW 78

Query: 136 PSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVF--DDGPPPTGKRYCINSAAL 195
           PS++  I   +K   +       R E+ CAACD HLGHV   +  P  T +R+C+NS +L
Sbjct: 79  PSFFDAIPGAIKQTPEAG---GRRMEITCAACDGHLGHVVKGEGFPTATDERHCVNSVSL 136

BLAST of CmoCh09G006640 vs. NCBI nr
Match: gi|659103010|ref|XP_008452427.1| (PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 2.5e-93
Identity = 170/198 (85.86%), Postives = 181/198 (91.41%), Query Frame = 1

Query: 1   MASRSLNLSI-PSGFINSSKTQQNFKFVSLPSPLIFRAPKYEKLSSSSIRAMGSSSSSQR 60
           MA+RSLNLSI P+GFI++SKTQQ+F F+S  SP  FRA K +KLSS S R MGSSSSSQ+
Sbjct: 4   MAARSLNLSILPTGFISTSKTQQSFNFLSFSSPPGFRAIKNKKLSSFSTRVMGSSSSSQK 63

Query: 61  PDGIREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCN 120
           PDGI+EAGT DYKSLSDDEWKKRLT EQFYITRQKGTERAFTGEYWNTKT G Y CICC+
Sbjct: 64  PDGIKEAGTVDYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGLYHCICCD 123

Query: 121 TPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDGP 180
           TPLFESSTKFDSGTGWPSYYQPIGDNVK+KLDLSIIFMPREEVLCA CDAHLGHVFDDGP
Sbjct: 124 TPLFESSTKFDSGTGWPSYYQPIGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFDDGP 183

Query: 181 PPTGKRYCINSAALKLKP 198
           PPTGKRYCINSAALKLKP
Sbjct: 184 PPTGKRYCINSAALKLKP 201

BLAST of CmoCh09G006640 vs. NCBI nr
Match: gi|778695599|ref|XP_004146010.2| (PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 344.7 bits (883), Expect = 1.0e-91
Identity = 168/199 (84.42%), Postives = 182/199 (91.46%), Query Frame = 1

Query: 1   MASRSLNLS-IPSGFINSSKTQQNFKFVSLPSPLIFRAPKYEKLSSSSIRAMG-SSSSSQ 60
           MA+RSLNLS +P+GFI++SKTQQ+F FVS  SP  FRA K +KLSSSS R MG SSSSSQ
Sbjct: 4   MAARSLNLSFLPTGFISTSKTQQSFNFVSFSSPPSFRAIKNKKLSSSSTRVMGCSSSSSQ 63

Query: 61  RPDGIREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICC 120
           +PDGI+EAGT +YKSLSDDEWKKRLT EQFYITRQKGTERAFTGEYWNTKT G Y CICC
Sbjct: 64  KPDGIKEAGTVNYKSLSDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTAGIYHCICC 123

Query: 121 NTPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDG 180
           +TPLFESSTKFDSGTGWPSYYQP+GDNVK+KLDLSIIFMPREEVLCA CDAHLGHVF+DG
Sbjct: 124 DTPLFESSTKFDSGTGWPSYYQPVGDNVKSKLDLSIIFMPREEVLCAVCDAHLGHVFNDG 183

Query: 181 PPPTGKRYCINSAALKLKP 198
           PPPTGKRYCINSAALKLKP
Sbjct: 184 PPPTGKRYCINSAALKLKP 202

BLAST of CmoCh09G006640 vs. NCBI nr
Match: gi|327387767|gb|AEA72443.1| (chloroplast methionine sulfoxide reductase B1, partial [Carica papaya])

HSP 1 Score: 301.2 bits (770), Expect = 1.3e-78
Identity = 145/200 (72.50%), Postives = 168/200 (84.00%), Query Frame = 1

Query: 1   MASRSLNLSIPSGFINSSKTQQNFKFVSLPSPLIFRAPKYEKLSS--SSIRAMGSSSSSQ 60
           MASR  NLS+P+  + SS T      +   S ++ R P  +K +S  S IR+MGSS+SSQ
Sbjct: 1   MASR--NLSVPTATLISSSTSCIDSGIKSSSFVLTRFPPLQKRASLFSCIRSMGSSASSQ 60

Query: 61  RPDGIREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICC 120
           +PD +++AG  DY S +DDEWKKRLT EQFYITRQKGTERAFTGEYWNTKTPGTY CICC
Sbjct: 61  KPDSVQDAGKIDYASWTDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTPGTYHCICC 120

Query: 121 NTPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDG 180
           +TPLFESSTKFDSGTGWPSYY+P+G+NVK+KLDLSIIFMPR+EVLC+ CDAHLGHVFDDG
Sbjct: 121 DTPLFESSTKFDSGTGWPSYYEPVGNNVKSKLDLSIIFMPRQEVLCSVCDAHLGHVFDDG 180

Query: 181 PPPTGKRYCINSAALKLKPK 199
           PPPTGKRYCINSAAL+LKPK
Sbjct: 181 PPPTGKRYCINSAALRLKPK 198

BLAST of CmoCh09G006640 vs. NCBI nr
Match: gi|225461830|ref|XP_002285647.1| (PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic [Vitis vinifera])

HSP 1 Score: 300.8 bits (769), Expect = 1.7e-78
Identity = 156/204 (76.47%), Postives = 170/204 (83.33%), Query Frame = 1

Query: 1   MASRSL-NLSIPSGFINSSKTQQNF----KFVSLPSPLIFRAPKYEKLSSSSIRAMGSS- 60
           MASRSL NLS P+  + SSKTQ  F    +FVS    L  R P  +K S+   R MGSS 
Sbjct: 1   MASRSLGNLSFPTQHV-SSKTQFVFGSKPQFVSFSGAL--RKPVRQKFST---RVMGSSA 60

Query: 61  SSSQRPDGIREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQ 120
           SSSQ+PD I+E G  DY S+SD+EWKKRLT EQFYITRQKGTERAFTGEYWNTKTPG Y 
Sbjct: 61  SSSQKPDSIQEPGKVDYTSISDEEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTPGAYH 120

Query: 121 CICCNTPLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHV 180
           CICC+TPLFESSTKFDSGTGWPSYYQPIG+NVK+KLDLSIIFMPR+EVLCAACDAHLGHV
Sbjct: 121 CICCDTPLFESSTKFDSGTGWPSYYQPIGNNVKSKLDLSIIFMPRQEVLCAACDAHLGHV 180

Query: 181 FDDGPPPTGKRYCINSAALKLKPK 199
           FDDGPPPTGKRYCINSA+LKLKPK
Sbjct: 181 FDDGPPPTGKRYCINSASLKLKPK 198

BLAST of CmoCh09G006640 vs. NCBI nr
Match: gi|802749959|ref|XP_012087688.1| (PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic [Jatropha curcas])

HSP 1 Score: 295.4 bits (755), Expect = 7.3e-77
Identity = 145/198 (73.23%), Postives = 164/198 (82.83%), Query Frame = 1

Query: 5   SLNLSIPSGFINSSKTQ----QNFKFVSLPSPLIFRAPKYEKLSSSSIRAMGSSSSSQRP 64
           S++ S  +    S KTQ     N K ++LP+   F  PK     S S+RAMGSS+SSQRP
Sbjct: 6   SISTSTNASSFISWKTQFQNPVNSKLLALPAAA-FGVPKRV---SFSLRAMGSSASSQRP 65

Query: 65  DGIREAGTADYKSLSDDEWKKRLTSEQFYITRQKGTERAFTGEYWNTKTPGTYQCICCNT 124
           D I+EAG  DY S++DDEWKKRLT+EQ+YITRQKGTERAFTGEYWNTKTPGTY CICC+T
Sbjct: 66  DNIQEAGKVDYTSVADDEWKKRLTAEQYYITRQKGTERAFTGEYWNTKTPGTYHCICCDT 125

Query: 125 PLFESSTKFDSGTGWPSYYQPIGDNVKTKLDLSIIFMPREEVLCAACDAHLGHVFDDGPP 184
           PLFES TKFDSGTGWPSYYQP+G NVK+KLDLSIIFMPR+EV+CA CDAHLGHVFDDGPP
Sbjct: 126 PLFESFTKFDSGTGWPSYYQPVGSNVKSKLDLSIIFMPRQEVVCAVCDAHLGHVFDDGPP 185

Query: 185 PTGKRYCINSAALKLKPK 199
           PTGKRYCINSA+LKLKPK
Sbjct: 186 PTGKRYCINSASLKLKPK 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MSRB1_ARATH1.2e-7166.67Peptide methionine sulfoxide reductase B1, chloroplastic OS=Arabidopsis thaliana... [more]
MSRB1_ORYSJ3.1e-6775.93Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza sativa subsp. ... [more]
MSRB_THEEB1.0e-4666.40Peptide methionine sulfoxide reductase MsrB OS=Thermosynechococcus elongatus (st... [more]
MSRB_ACAM15.2e-4364.80Peptide methionine sulfoxide reductase MsrB OS=Acaryochloris marina (strain MBIC... [more]
MSRB_PSEPF1.4e-4061.48Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas fluorescens (strain P... [more]
Match NameE-valueIdentityDescription
A0A0A0L4I4_CUCSA7.3e-9284.42Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622800 PE=4 SV=1[more]
F2YS22_CARPA9.2e-7972.50Chloroplast methionine sulfoxide reductase B1 (Fragment) OS=Carica papaya PE=2 S... [more]
F6H2J9_VITVI1.2e-7876.47Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00170 PE=4 SV=... [more]
A0A067JL74_JATCU5.1e-7773.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25702 PE=4 SV=1[more]
A0A067D491_CITSI2.5e-7673.47Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028408mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G53670.16.7e-7366.67 methionine sulfoxide reductase B 1[more]
AT4G04830.11.2e-2643.20 methionine sulfoxide reductase B5[more]
AT4G04800.11.2e-2645.16 methionine sulfoxide reductase B3[more]
AT4G21860.16.2e-2640.00 methionine sulfoxide reductase B 2[more]
AT4G21850.12.4e-2544.63 methionine sulfoxide reductase B9[more]
Match NameE-valueIdentityDescription
gi|659103010|ref|XP_008452427.1|2.5e-9385.86PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [... [more]
gi|778695599|ref|XP_004146010.2|1.0e-9184.42PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic isoform X1 [... [more]
gi|327387767|gb|AEA72443.1|1.3e-7872.50chloroplast methionine sulfoxide reductase B1, partial [Carica papaya][more]
gi|225461830|ref|XP_002285647.1|1.7e-7876.47PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic [Vitis vinif... [more]
gi|802749959|ref|XP_012087688.1|7.3e-7773.23PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic [Jatropha cu... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002579Met_Sox_Rdtase_MsrB
IPR011057Mss4-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0006979response to oxidative stress
GO:0030091protein repair
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016671oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0033743peptide-methionine (R)-S-oxide reductase activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0030091 protein repair
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005575 cellular_component
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G006640.1CmoCh09G006640.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002579Peptide methionine sulphoxide reductase MrsBGENE3DG3DSA:2.170.150.20coord: 71..198
score: 4.9
IPR002579Peptide methionine sulphoxide reductase MrsBPFAMPF01641SelRcoord: 78..197
score: 1.8
IPR002579Peptide methionine sulphoxide reductase MrsBTIGRFAMsTIGR00357TIGR00357coord: 74..197
score: 5.6
IPR011057Mss4-likeunknownSSF51316Mss4-likecoord: 74..197
score: 1.52
NoneNo IPR availablePANTHERPTHR10173:SF38PEPTIDE METHIONINE SULFOXIDE REDUCTASE B1, CHLOROPLASTICcoord: 41..198
score: 2.3E