CmoCh09G005070 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGAGTACGAGAACGTGGTGGTGGGGAAATTAAGGCTGAAGGGGAAGGCCTTGGGCGTAAGAGGAGATGGAATCAGGAAGAAAAAGAAGTCGAAGAAGCAGTTTAACAATTTTTCTCAAACTGTCAGAGAAGACGATCTCTCACCAGGTTAGTTGATTTGTTCTGAATTTCTCGTTGAATTTTGTTTGGAGATGATTGAGCGTTGTTTTAATGCTAAATTGTCAAGAATTTGATATATATGGAACAGAGTGGTTGGTTAGAAACTTGAATTTGTTTGAAGAAATTGTTATCAGATCTTTTGGAAGACGAGTTCAAGTAGTTAGGTTTTTCAAGCTGATTAGATCATGAATTCACGGGGCTTCAATTATGCAGATACAGTAATCTTAGACTTTTAGAGTTAAAACAAGATTTAATCCTACTTTGGTCTCTGTAATTACTTGTTCATTCATCTCGTGTAAATTCTGAAACACTTCATGCAAATAAAAAATGTTTCAAAATCTTCATGGTTCGAGTGAATTTACGGAATTCCTTTGATCGAGTAATTTCATTTAGCTTATCGACATCTTTTTCTTTTGGAGATTGTTAGGAAATGGACGCTACTTCATTGGTTGACTGTTCTAAAGAGAACCTGAACATGAACGATATGCTAACACCTGGGGAGAGGCGATATCTTCAGCAATGGGAGAAGATTGATGTTCAAAGAATAGCAAAGATGGCCATAAAATCTCATCGGGATCATATTCACGAATTCAATCAATATCTTACCAATCTGAGTGAACACCATGATATTCCTAAAATCGGGCCCGGCTAA ATGTCGGAGTACGAGAACGTGGTGGTGGGGAAATTAAGGCTGAAGGGGAAGGCCTTGGGCGTAAGAGGAGATGGAATCAGGAAGAAAAAGAAGTCGAAGAAGCAGTTTAACAATTTTTCTCAAACTGTCAGAGAAGACGATCTCTCACCAGGTTAATCTTTTGGAAGACGAGTTCAAGAAATGGACGCTACTTCATTGGTTGACTGTTCTAAAGAGAACCTGAACATGAACGATATGCTAACACCTGGGGAGAGGCGATATCTTCAGCAATGGGAGAAGATTGATGTTCAAAGAATAGCAAAGATGGCCATAAAATCTCATCGGGATCATATTCACGAATTCAATCAATATCTTACCAATCTGAGTGAACACCATGATATTCCTAAAATCGGGCCCGGCTAA ATGGACGCTACTTCATTGGTTGACTGTTCTAAAGAGAACCTGAACATGAACGATATGCTAACACCTGGGGAGAGGCGATATCTTCAGCAATGGGAGAAGATTGATGTTCAAAGAATAGCAAAGATGGCCATAAAATCTCATCGGGATCATATTCACGAATTCAATCAATATCTTACCAATCTGAGTGAACACCATGATATTCCTAAAATCGGGCCCGGCTAA
BLAST of CmoCh09G005070 vs. Swiss-Prot
Match: FA32A_BOVIN (Protein FAM32A OS=Bos taurus GN=FAM32A PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 7.2e-06 Identity = 21/53 (39.62%), Postives = 35/53 (66.04%), Query Frame = 1
BLAST of CmoCh09G005070 vs. Swiss-Prot
Match: FA32A_HUMAN (Protein FAM32A OS=Homo sapiens GN=FAM32A PE=1 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 7.2e-06 Identity = 21/53 (39.62%), Postives = 35/53 (66.04%), Query Frame = 1
BLAST of CmoCh09G005070 vs. Swiss-Prot
Match: FA32A_MOUSE (Protein FAM32A OS=Mus musculus GN=Fam32a PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 7.2e-06 Identity = 21/53 (39.62%), Postives = 35/53 (66.04%), Query Frame = 1
BLAST of CmoCh09G005070 vs. Swiss-Prot
Match: FA32A_PONAB (Protein FAM32A OS=Pongo abelii GN=FAM32A PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 7.2e-06 Identity = 21/53 (39.62%), Postives = 35/53 (66.04%), Query Frame = 1
BLAST of CmoCh09G005070 vs. Swiss-Prot
Match: FA32A_RAT (Protein FAM32A OS=Rattus norvegicus GN=Fam32a PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 7.2e-06 Identity = 21/53 (39.62%), Postives = 35/53 (66.04%), Query Frame = 1
BLAST of CmoCh09G005070 vs. TrEMBL
Match: A0A0A0LDT5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881680 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 2.1e-20 Identity = 53/77 (68.83%), Postives = 59/77 (76.62%), Query Frame = 1
BLAST of CmoCh09G005070 vs. TrEMBL
Match: B9H7C0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15980g PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 5.2e-19 Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 1
BLAST of CmoCh09G005070 vs. TrEMBL
Match: A0A0S3RC90_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G089300 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 6.3e-17 Identity = 41/64 (64.06%), Postives = 55/64 (85.94%), Query Frame = 1
BLAST of CmoCh09G005070 vs. TrEMBL
Match: A0A0L9UGN2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g210600 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 6.3e-17 Identity = 41/64 (64.06%), Postives = 55/64 (85.94%), Query Frame = 1
BLAST of CmoCh09G005070 vs. TrEMBL
Match: A0A059CQQ3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02104 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 2.4e-16 Identity = 41/57 (71.93%), Postives = 50/57 (87.72%), Query Frame = 1
BLAST of CmoCh09G005070 vs. TAIR10
Match: AT1G16810.1 (AT1G16810.1 unknown protein) HSP 1 Score: 86.7 bits (213), Expect = 6.7e-18 Identity = 37/63 (58.73%), Postives = 53/63 (84.13%), Query Frame = 1
BLAST of CmoCh09G005070 vs. NCBI nr
Match: gi|659132680|ref|XP_008466328.1| (PREDICTED: protein FAM32A-like [Cucumis melo]) HSP 1 Score: 108.6 bits (270), Expect = 4.6e-21 Identity = 54/80 (67.50%), Postives = 59/80 (73.75%), Query Frame = 1
BLAST of CmoCh09G005070 vs. NCBI nr
Match: gi|449437356|ref|XP_004136458.1| (PREDICTED: protein FAM32A-like [Cucumis sativus]) HSP 1 Score: 105.9 bits (263), Expect = 3.0e-20 Identity = 53/77 (68.83%), Postives = 59/77 (76.62%), Query Frame = 1
BLAST of CmoCh09G005070 vs. NCBI nr
Match: gi|224082250|ref|XP_002306617.1| (hypothetical protein POPTR_0005s15980g [Populus trichocarpa]) HSP 1 Score: 101.3 bits (251), Expect = 7.4e-19 Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 1
BLAST of CmoCh09G005070 vs. NCBI nr
Match: gi|802623874|ref|XP_012076315.1| (PREDICTED: protein FAM32A-like [Jatropha curcas]) HSP 1 Score: 100.9 bits (250), Expect = 9.7e-19 Identity = 45/57 (78.95%), Postives = 50/57 (87.72%), Query Frame = 1
BLAST of CmoCh09G005070 vs. NCBI nr
Match: gi|743914986|ref|XP_011001435.1| (PREDICTED: protein FAM32A-like [Populus euphratica]) HSP 1 Score: 100.5 bits (249), Expect = 1.3e-18 Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |