CmoCh09G004290 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATGTGATTTCGATTTCAGAGAAGAAGAAGAAGAGGTGGATTTGGGGAAAATGTTCTGCAAAATTACTTTGATGTCGAAGAAGAAGAAGAGCGGAACCGTGCCGGTTTATTTGAATGTGTATGATTTAACGCCGATCAATGGCTATGCGTATTGGCTCGGACTTGGGGTTTACCATTCCGGCGTGCAAGGTTAGACAATTTATGGCGTTTTTCTGTGTTTCTTCTTCTTCTTCTTCTTCCATTTTTAGTATGTTGTTAGCAGAGGCGACGAGGATTTAGGTTTTTTTTGTAAATAATTGTCATATAAACCGAAGGTTTTTCAAATCGTTGTTTCCTTTCTTTCTTGATTCTTCATTGCGATTTTTCCCCTTCAGATCTGAGGTTGAATTCGTTCTGTTTTTGGCTGAAATTTGTGCTACTTGAGAAACTGGAGGAACATGGAGATTGTATTATGGCTGTGCTGTGAAATTTTCTGTTTCTGGTTGTGTATTTATCTCTATGAGCTAATTGTTCAGTTTATGGAAAGATGATTCTGTAATGGCTAGCTTGATTTGGCTGAGAAATTGATGAGTTCCTGCATATTTCTTTGTTTCTGATTGCTTATATGATTTTCTATTGATATCTATATCGTTTGTGTTTGGCCTTTTCTGAGTTTTTTTTGATGACTCAAGCAGTCAATGTTAGTGTATCCAGTTTTTTTAATGTATTTTATCAAGAACAGGCTGTTCAAAGCTCACATATCTCATTGGGGTGAACCTTTTTTTGCAGTTCATGGAGTTGAATATGCATTTGGAGCACATGAACGTGCAACTTCAGGGATATTTGAGGTAGAACCAAGACAATGTCCTGGTTTTACGTTTAGGAAATCAATTTGTATCGGAAGAACGAATCTAGATCAGAAAGATGTTCGCTCGTTTATGGAGAAAGTAGCCGAAGAGTACTCCGGGAACACTTATCATCTCATAACGAAAAATTGCAACCATTTTTGCAATGATGTATGCTTAAGGTTGGTAGGGAAACCAATTCCTAGCTGGGTTAACCGTCTTGCTCGACTTGGTAAGATCGTCGATTATACTCCCAGATGACTGTTTTCTTTTCCATAATCCTGCTTGTTCTTGCTGTGACATAGAATCCTAGTTTACAAACAAATTTGTGTTTCTATGCCTGATCTTATGTGACTTTTGTCTTCCCCTGCATAATTAGGAGCACGACATGACTCGTGAGACGTTAATTATCTAAGTGATAATGTTACGAGCGCTTCGTTTATTCCCTCTGAGATTGGAACTTGCAACAATTTGTGATGTTATTTCGATACATTTTTCAGGTCTTTTCTGCAACTGCGTTCTTCCAGCGAGTTTGCACGAAGCGAAGGTTCGGCAAGTACGCCCAGGAGATAAGCTCAACAACAATGGTGCAAAGAAGAAATTGAAAAGCCAACCAAGTAGGTATAATGATAAACCTTCTTCTGTTTCCAATCCTCCAACTTCAACCGTCAAAGTAAGTAAACAAAAACGATGTATCCCGCCATCATCAACGGTGATTCATTCTTCACCGTCCACAACCCAAGCTGTAAAGCTGTAATAGTGACTGTTTTATAGGCCATTTAAGAGCTTAATTAACAGAAGACAGGCAAAATAACATGATTTTTTTTTGCCTTTCCACTGGTCTTCTGCTTCTACTAATCCTATAGAAAGAAAGAAAAGTTGTGGTGGAGCAGTTTTGTGTTGAAATGCAGTGTCTGTTTGTGCAGTTTGATTGAGATTTTATCATTGAAATGGTTTATAGATTGAAAAAAAATGGTGTTCTTGGGAAGTTGGAGAAGGATGTAAAGAAGAAGGATTGTATGGAAAGATGTCAACTCAAGTGGAGATGGCATTAATGGAAGTGGGTATGGTGGGGATTGGCTGGTGGAGCCTCCCTCCTCCTCCATTCACTTCTTATGGACCCAAAGTCTTCTCTCAAATATGTATATATCTTTCAATGTCGGTGGTAAAAACCAAGCTGAAATGACACCCTTCCTCTTTTCCACCTCTCGTCCTATTCGGTTTGGCTCGAGATTTACGAAGCTTATGGGTTTGAAAGGTCGGAGGTGCCTTATCGATATTTGAATTGTTCAAAAGTATTGTGTAACAGTTCAAGCCTACTTCTAGCAGATATTGTCCGTTTTTGCCTGTTACGTATTGCTATCAGACTCATGGTTTTAAAACGCGTCTGTTAGGAAAAGGTTTCCACACCTCTATAATGAATGTGTCGTTCTCTTCTTCAACCAATGTATGATCTCACATATTGATTATAGAAATTGGTGTTTGTGTCGTTTGTATGA ATGTTATGTGATTTCGATTTCAGAGAAGAAGAAGAAGAGGTGGATTTGGGGAAAATGTTCTGCAAAATTACTTTGATGTCGAAGAAGAAGAAGAGCGGAACCGTGCCGGTTTATTTGAATGTGTATGATTTAACGCCGATCAATGGCTATGCGTATTGGCTCGGACTTGGGGTTTACCATTCCGGCGTGCAAGTTCATGGAGTTGAATATGCATTTGGAGCACATGAACGTGCAACTTCAGGGATATTTGAGGTAGAACCAAGACAATGTCCTGGTTTTACGTTTAGGAAATCAATTTGTATCGGAAGAACGAATCTAGATCAGAAAGATGTTCGCTCGTTTATGGAGAAAGTAGCCGAAGAGTACTCCGGGAACACTTATCATCTCATAACGAAAAATTGCAACCATTTTTGCAATGATGTATGCTTAAGGTTGGTAGGGAAACCAATTCCTAGCTGGGTTAACCGTCTTGCTCGACTTGGTCTTTTCTGCAACTGCGTTCTTCCAGCGAGTTTGCACGAAGCGAAGGTTCGGCAAGTACGCCCAGGAGATAAGCTCAACAACAATGGTGCAAAGAAGAAATTGAAAAGCCAACCAAGTAGGTATAATGATAAACCTTCTTCTGTTTCCAATCCTCCAACTTCAACCGTCAAAGTAAGTAAACAAAAACGATGTATCCCGCCATCATCAACGGTGATTCATTCTTCACCGTCCACAACCCAAGCTGTAAAGCTGTAATAGTGACTGTTTTATAGGCCATTTAAGAGCTTAATTAACAGAAGACAGGCAAAATAACATGATTTTTTTTTGCCTTTCCACTGGTCTTCTGCTTCTACTAATCCTATAGAAAGAAAGAAAAGTTGTGGTGGAGCAGTTTTGTGTTGAAATGCAGTGTCTGTTTGTGCAGTTTGATTGAGATTTTATCATTGAAATGGTTTATAGATTGAAAAAAAATGGTGTTCTTGGGAAGTTGGAGAAGGATGTAAAGAAGAAGGATTGTATGGAAAGATGTCAACTCAAGTGGAGATGGCATTAATGGAAGTGGGTATGGTGGGGATTGGCTGGTGGAGCCTCCCTCCTCCTCCATTCACTTCTTATGGACCCAAAGTCTTCTCTCAAATATGTATATATCTTTCAATGTCGGTGGTAAAAACCAAGCTGAAATGACACCCTTCCTCTTTTCCACCTCTCGTCCTATTCGGTTTGGCTCGAGATTTACGAAGCTTATGGGTTTGAAAGGTCGGAGGTGCCTTATCGATATTTGAATTGTTCAAAAGTATTGTGTAACAGTTCAAGCCTACTTCTAGCAGATATTGTCCGTTTTTGCCTGTTACGTATTGCTATCAGACTCATGGTTTTAAAACGCGTCTGTTAGGAAAAGGTTTCCACACCTCTATAATGAATGTGTCGTTCTCTTCTTCAACCAATGTATGATCTCACATATTGATTATAGAAATTGGTGTTTGTGTCGTTTGTATGA ATGTTATGTGATTTCGATTTCAGAGAAGAAGAAGAAGAGGTGGATTTGGGGAAAATGTTCTGCAAAATTACTTTGATGTCGAAGAAGAAGAAGAGCGGAACCGTGCCGGTTTATTTGAATGTGTATGATTTAACGCCGATCAATGGCTATGCGTATTGGCTCGGACTTGGGGTTTACCATTCCGGCGTGCAAGTTCATGGAGTTGAATATGCATTTGGAGCACATGAACGTGCAACTTCAGGGATATTTGAGGTAGAACCAAGACAATGTCCTGGTTTTACGTTTAGGAAATCAATTTGTATCGGAAGAACGAATCTAGATCAGAAAGATGTTCGCTCGTTTATGGAGAAAGTAGCCGAAGAGTACTCCGGGAACACTTATCATCTCATAACGAAAAATTGCAACCATTTTTGCAATGATGTATGCTTAAGGTTGGTAGGGAAACCAATTCCTAGCTGGGTTAACCGTCTTGCTCGACTTGGTCTTTTCTGCAACTGCGTTCTTCCAGCGAGTTTGCACGAAGCGAAGGTTCGGCAAGTACGCCCAGGAGATAAGCTCAACAACAATGGTGCAAAGAAGAAATTGAAAAGCCAACCAAGTAGGTATAATGATAAACCTTCTTCTGTTTCCAATCCTCCAACTTCAACCGTCAAAGTAAGTAAACAAAAACGATGTATCCCGCCATCATCAACGGTGATTCATTCTTCACCGTCCACAACCCAAGCTGTAAAGCTGTAA
BLAST of CmoCh09G004290 vs. Swiss-Prot
Match: PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 5.1e-56 Identity = 86/142 (60.56%), Postives = 115/142 (80.99%), Query Frame = 1
BLAST of CmoCh09G004290 vs. Swiss-Prot
Match: DESI2_XENLA (Desumoylating isopeptidase 2 OS=Xenopus laevis GN=desi2 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29 Identity = 62/136 (45.59%), Postives = 86/136 (63.24%), Query Frame = 1
BLAST of CmoCh09G004290 vs. Swiss-Prot
Match: DESI2_DANRE (Desumoylating isopeptidase 2 OS=Danio rerio GN=desi2 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 9.1e-29 Identity = 61/136 (44.85%), Postives = 88/136 (64.71%), Query Frame = 1
BLAST of CmoCh09G004290 vs. Swiss-Prot
Match: DESI2_CHICK (Desumoylating isopeptidase 2 OS=Gallus gallus GN=DESI2 PE=2 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27 Identity = 58/135 (42.96%), Postives = 86/135 (63.70%), Query Frame = 1
BLAST of CmoCh09G004290 vs. Swiss-Prot
Match: DESI2_HUMAN (Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27 Identity = 57/135 (42.22%), Postives = 86/135 (63.70%), Query Frame = 1
BLAST of CmoCh09G004290 vs. TrEMBL
Match: A0A0A0L339_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652130 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 4.4e-107 Identity = 197/235 (83.83%), Postives = 208/235 (88.51%), Query Frame = 1
BLAST of CmoCh09G004290 vs. TrEMBL
Match: V4UH60_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009362mg PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 6.7e-87 Identity = 157/234 (67.09%), Postives = 191/234 (81.62%), Query Frame = 1
BLAST of CmoCh09G004290 vs. TrEMBL
Match: A0A067FWB6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026795mg PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 6.7e-87 Identity = 157/234 (67.09%), Postives = 191/234 (81.62%), Query Frame = 1
BLAST of CmoCh09G004290 vs. TrEMBL
Match: A0A0D2UCT9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G117900 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 9.6e-86 Identity = 159/231 (68.83%), Postives = 186/231 (80.52%), Query Frame = 1
BLAST of CmoCh09G004290 vs. TrEMBL
Match: F6H3J6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05960 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 3.7e-85 Identity = 161/226 (71.24%), Postives = 186/226 (82.30%), Query Frame = 1
BLAST of CmoCh09G004290 vs. TAIR10
Match: AT5G25170.1 (AT5G25170.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 300.8 bits (769), Expect = 7.5e-82 Identity = 144/216 (66.67%), Postives = 178/216 (82.41%), Query Frame = 1
BLAST of CmoCh09G004290 vs. TAIR10
Match: AT2G25190.1 (AT2G25190.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 267.3 bits (682), Expect = 9.2e-72 Identity = 128/198 (64.65%), Postives = 157/198 (79.29%), Query Frame = 1
BLAST of CmoCh09G004290 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein) HSP 1 Score: 267.3 bits (682), Expect = 9.2e-72 Identity = 130/223 (58.30%), Postives = 159/223 (71.30%), Query Frame = 1
BLAST of CmoCh09G004290 vs. TAIR10
Match: AT1G80690.1 (AT1G80690.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 241.5 bits (615), Expect = 5.4e-64 Identity = 121/214 (56.54%), Postives = 153/214 (71.50%), Query Frame = 1
BLAST of CmoCh09G004290 vs. TAIR10
Match: AT1G47740.1 (AT1G47740.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 231.9 bits (590), Expect = 4.3e-61 Identity = 117/211 (55.45%), Postives = 138/211 (65.40%), Query Frame = 1
BLAST of CmoCh09G004290 vs. NCBI nr
Match: gi|449455543|ref|XP_004145512.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis sativus]) HSP 1 Score: 395.6 bits (1015), Expect = 6.4e-107 Identity = 197/235 (83.83%), Postives = 208/235 (88.51%), Query Frame = 1
BLAST of CmoCh09G004290 vs. NCBI nr
Match: gi|659104267|ref|XP_008452873.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis melo]) HSP 1 Score: 381.7 bits (979), Expect = 9.5e-103 Identity = 192/233 (82.40%), Postives = 206/233 (88.41%), Query Frame = 1
BLAST of CmoCh09G004290 vs. NCBI nr
Match: gi|1009134975|ref|XP_015884736.1| (PREDICTED: deSI-like protein At4g17486 [Ziziphus jujuba]) HSP 1 Score: 339.3 bits (869), Expect = 5.4e-90 Identity = 168/231 (72.73%), Postives = 193/231 (83.55%), Query Frame = 1
BLAST of CmoCh09G004290 vs. NCBI nr
Match: gi|567916618|ref|XP_006450315.1| (hypothetical protein CICLE_v10009362mg [Citrus clementina]) HSP 1 Score: 328.6 bits (841), Expect = 9.6e-87 Identity = 157/234 (67.09%), Postives = 191/234 (81.62%), Query Frame = 1
BLAST of CmoCh09G004290 vs. NCBI nr
Match: gi|823239328|ref|XP_012452325.1| (PREDICTED: deSI-like protein At4g17486 [Gossypium raimondii]) HSP 1 Score: 324.7 bits (831), Expect = 1.4e-85 Identity = 159/231 (68.83%), Postives = 186/231 (80.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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