CmoCh09G003350 (gene) Cucurbita moschata (Rifu)

NameCmoCh09G003350
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionConserved hypothetical plastid protein Ycf36
LocationCmo_Chr09 : 1442230 .. 1443946 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATATACTCCCGGGAAAACCATCGCCGGCGACTTTCTTTCCGTCCGCACCGAACCCCAGACCTCTAATTTCACCTTTCAAAAACCCAAGACCATTCCACCTCCGAAATTCCCCTTCCAGAATATCCCTCTCCTTCTCTTTCCGAAAAGGAAACAACATGCCGTCGGATACTGGCTGCCCTGTTCCGCCGGAGCAGCTGCCGATTAATGAATATCAGACTCTCTCCACCTCTTTCCCTTTCTCCTGGGCTGTCGGAGATATAGTTGAGTACTGTTCTCGATTGGTCGCCACCGGTGCTTCCTTTGCGCTCTTCATAGGACTTCCGGTTGCTTGGTTCGGCACCGTGGGGGTCGAATCGGATCCGTTGAGTCGATCTCTTTGCGCTGTTTCGAGTGGAATATTATTCGTTACGATCGCGGTTGTCAGGATGTATCTCGGTTGGGCTTACGTCGGTAACCGTCTACTCAGTGCGACTGTAGAATGTAAACTCTCATTTCTGTGTTTCTTACTTTTAGCCCTAGAATCGCAGTTCTTCGTTCAAAGATAGTACTGGATTCTTTTCTTTCCATGTCTAGCGAAAAAAATTTCATCATCGTTCTGAAATTTTCCTTTATACAGACGAAGAGACCGGATGGTACGACGGCCAGGTACACTCATCCAGTTCTTCTTCTTCTTCTCATAGGATCAAGATTCCATTTCATCTCTGAAATTAAGACCTCATGTTTGCAGATTTGGGTAAAAACTGCCGAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTAAGCAACCGATCTCGATCCTAATTTCGACTTCCTCTCCATAAATCCAAGTTTCAGTTGCAATTTAGAAATCTTCTCAGGTGAAGCCGGTGCTCAGTAGGCTAAAATACACTCTCGTTAGCCTTGCGGCATCTCTGTTTGTGTCCATTATTGTGCTCATCAACATCGATGGAAGCCAATTGCTGGGGCCTTTCTTCACCGGAAAATATGCAGCAGATGACAGCAGCAGCAGGGTCATTCCCGGCGTTTATAGCGACGAATCCGCCAGATCTTTCGAGCCTGATGCGTTCTGTGGGCGTGGCGAAGATGATCTTCCCAATGACATTCACTTCGCTGGTAACTGATTGATTAATATTTTTTTTTCTTTAAATAATAATTTTTTAAAATTATCTATTTTCTCTGTTTCGTACGTTTCTAATTTCATGAGAGAGTAGATTGAAACTGGCAGGCTTAATTTGTAAAGGAAAAGCCCAAATCACATAATGAGCCCAGCCCAAATCATAGAATGAGCCCAGCCCAGTAGCTACCGCACCAGTTTCTACAGAATGAGCCCAGCCCAGTAGCCACCTCACCAGTTTCCACAGACTCAGCCCAAATGCTCCTCACTATTTGTTGCTTAATAGTTAACCAATAAGAAGCTGACACCTGTATTGCGTTAAATTATTATTTACTTTAATTATATTCTCTTTTTTTTTTTTGGATAAGACAATAATTTATTACTTTTTTGTTGTCGAATTTTCCGTAAATCCTGTTTACAAATTTTTCAATCAACGACTTTTTTTTTACTGTTCAGTCCGTTTTTCAATAAATAAATAAATAAATAAAATTATCTCCATCGGCTTCACGCTTCCCAATGTAATATTTCGATTTTCCACATACTTTAGGCATAGTCCAATTTTGTGGCTGAATCATCGTCATTACATGTGACC

mRNA sequence

ATGTATATACTCCCGGGAAAACCATCGCCGGCGACTTTCTTTCCGTCCGCACCGAACCCCAGACCTCTAATTTCACCTTTCAAAAACCCAAGACCATTCCACCTCCGAAATTCCCCTTCCAGAATATCCCTCTCCTTCTCTTTCCGAAAAGGAAACAACATGCCGTCGGATACTGGCTGCCCTGTTCCGCCGGAGCAGCTGCCGATTAATGAATATCAGACTCTCTCCACCTCTTTCCCTTTCTCCTGGGCTGTCGGAGATATAGTTGAGTACTGTTCTCGATTGGTCGCCACCGGTGCTTCCTTTGCGCTCTTCATAGGACTTCCGGTTGCTTGGTTCGGCACCGTGGGGGTCGAATCGGATCCGTTGAGTCGATCTCTTTGCGCTGTTTCGAGTGGAATATTATTCGTTACGATCGCGGTTGTCAGGATGTATCTCGGTTGGGCTTACGTCGGTAACCGTCTACTCAGTGCGACTGTAGAATACGAAGAGACCGGATGGTACGACGGCCAGATTTGGGTAAAAACTGCCGAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTGAAGCCGGTGCTCAGTAGGCTAAAATACACTCTCGTTAGCCTTGCGGCATCTCTGTTTGTGTCCATTATTGTGCTCATCAACATCGATGGAAGCCAATTGCTGGGGCCTTTCTTCACCGGAAAATATGCAGCAGATGACAGCAGCAGCAGGGTCATTCCCGGCGTTTATAGCGACGAATCCGCCAGATCTTTCGAGCCTGATGCGTTCTGTGGGCGTGGCGAAGATGATCTTCCCAATGACATTCACTTCGCTGATTGAAACTGGCAGGCTTAATTTGTAAAGGAAAAGCCCAAATCACATAATGAGCCCAGCCCAAATCATAGAATGAGCCCAGCCCAGTAGCTACCGCACCAGTTTCTACAGAATGAGCCCAGCCCAGTAGCCACCTCACCAGTTTCCACAGACTCAGCCCAAATGCTCCTCACTATTTGTTGCTTAATAGTTAACCAATAAGAAGCTGACACCTGTATTGCGTTAAATTATTATTTACTTTAATTATATTCTCTTTTTTTTTTTTGGATAAGACAATAATTTATTACTTTTTTGTTGTCGAATTTTCCGTAAATCCTGTTTACAAATTTTTCAATCAACGACTTTTTTTTTACTGTTCAGTCCGTTTTTCAATAAATAAATAAATAAATAAAATTATCTCCATCGGCTTCACGCTTCCCAATGTAATATTTCGATTTTCCACATACTTTAGGCATAGTCCAATTTTGTGGCTGAATCATCGTCATTACATGTGACC

Coding sequence (CDS)

ATGTATATACTCCCGGGAAAACCATCGCCGGCGACTTTCTTTCCGTCCGCACCGAACCCCAGACCTCTAATTTCACCTTTCAAAAACCCAAGACCATTCCACCTCCGAAATTCCCCTTCCAGAATATCCCTCTCCTTCTCTTTCCGAAAAGGAAACAACATGCCGTCGGATACTGGCTGCCCTGTTCCGCCGGAGCAGCTGCCGATTAATGAATATCAGACTCTCTCCACCTCTTTCCCTTTCTCCTGGGCTGTCGGAGATATAGTTGAGTACTGTTCTCGATTGGTCGCCACCGGTGCTTCCTTTGCGCTCTTCATAGGACTTCCGGTTGCTTGGTTCGGCACCGTGGGGGTCGAATCGGATCCGTTGAGTCGATCTCTTTGCGCTGTTTCGAGTGGAATATTATTCGTTACGATCGCGGTTGTCAGGATGTATCTCGGTTGGGCTTACGTCGGTAACCGTCTACTCAGTGCGACTGTAGAATACGAAGAGACCGGATGGTACGACGGCCAGATTTGGGTAAAAACTGCCGAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTGAAGCCGGTGCTCAGTAGGCTAAAATACACTCTCGTTAGCCTTGCGGCATCTCTGTTTGTGTCCATTATTGTGCTCATCAACATCGATGGAAGCCAATTGCTGGGGCCTTTCTTCACCGGAAAATATGCAGCAGATGACAGCAGCAGCAGGGTCATTCCCGGCGTTTATAGCGACGAATCCGCCAGATCTTTCGAGCCTGATGCGTTCTGTGGGCGTGGCGAAGATGATCTTCCCAATGACATTCACTTCGCTGATTGA
BLAST of CmoCh09G003350 vs. Swiss-Prot
Match: YCF36_CYAPA (Uncharacterized protein ycf36 OS=Cyanophora paradoxa GN=ycf36 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-27
Identity = 64/145 (44.14%), Postives = 93/145 (64.14%), Query Frame = 1

Query: 58  TGCPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVG 117
           T CP+P EQ P+NEYQ L+ S  F+W    +  Y   L  T  S    +   + ++  + 
Sbjct: 3   TFCPIPTEQQPLNEYQILNNSVLFNWPSQKLKIYFFYLF-TIYSIGFLLTFLITFYNDLF 62

Query: 118 VESDPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTA 177
           +   P++  +  +  G   + + ++R+YLGW+Y+  RLLSATV YEE+GWYDGQIWVK++
Sbjct: 63  IVH-PVNIFVHGIIGGNFVLILDLLRLYLGWSYICQRLLSATVSYEESGWYDGQIWVKSS 122

Query: 178 EVLARDRLLGSYTVKPVLSRLKYTL 203
           EVL +DRL+G Y V+PVL+RLK TL
Sbjct: 123 EVLIQDRLIGIYQVRPVLNRLKQTL 145

BLAST of CmoCh09G003350 vs. Swiss-Prot
Match: YCF36_PORPU (Uncharacterized protein ycf36 OS=Porphyra purpurea GN=ycf36 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.4e-24
Identity = 61/147 (41.50%), Postives = 84/147 (57.14%), Query Frame = 1

Query: 60  CPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVE 119
           CPVP EQ P+NEY +L  S+ F W       Y  ++  T  +   F+  PV       + 
Sbjct: 8   CPVPLEQQPVNEYNSLKNSWFFCWPTLSSHSYNKKITITLIA-TCFLVSPVL-LSIFPIA 67

Query: 120 SDPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEV 179
             PL           L     ++R+YLGW+YV  RL+SATV YEE+GWYDGQIWVK +E+
Sbjct: 68  KLPLKFFFSEFIISSLITCFILIRLYLGWSYVVKRLMSATVFYEESGWYDGQIWVKPSEI 127

Query: 180 LARDRLLGSYTVKPVLSRLKYTLVSLA 207
           L +DR +G Y V P+L+++K TL  L+
Sbjct: 128 LVKDRFIGLYEVFPLLNKIKNTLSCLS 152

BLAST of CmoCh09G003350 vs. Swiss-Prot
Match: YCF36_PYRYE (Uncharacterized protein ycf36 OS=Pyropia yezoensis GN=ycf36 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.8e-23
Identity = 64/161 (39.75%), Postives = 91/161 (56.52%), Query Frame = 1

Query: 57  DTGCPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTV 116
           +T CPVP EQ P++EY +L  S+ F W       Y  ++        L +  P+      
Sbjct: 5   NTQCPVPKEQQPVHEYTSLKNSWFFCWPTLSRRSYNKKITIALLLNCLLVS-PIL-LSIF 64

Query: 117 GVESDPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKT 176
            +   PL        +  L     ++R+YLGW+YV  RL+SATV YEE+GWYDGQIWVK 
Sbjct: 65  PITKLPLKFFFSEFITSSLMTGFILIRLYLGWSYVVKRLMSATVFYEESGWYDGQIWVKP 124

Query: 177 AEVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLI 218
           +E+L +DR +G Y V P+L+++K TL  L  SL +S  VL+
Sbjct: 125 SEILLKDRFIGLYEVFPLLNKIKNTLSFL--SLMISGPVLL 161

BLAST of CmoCh09G003350 vs. Swiss-Prot
Match: YCF36_GUITH (Uncharacterized protein ycf36 OS=Guillardia theta GN=ycf36 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.6e-21
Identity = 55/140 (39.29%), Postives = 78/140 (55.71%), Query Frame = 1

Query: 60  CPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVE 119
           CPVP  QLPINEY  L++++ FSWA      Y   L+       LF  + + +  +    
Sbjct: 3   CPVPENQLPINEYNKLTSAWDFSWACKIGKLYYKFLLKMQLCLFLFFCICLNFLDS---- 62

Query: 120 SDPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEV 179
                  L ++    LF+ +  +R YLG+ Y+  RLL + + YEE+ WYDGQ+WVK    
Sbjct: 63  --KYETGLYSLILSTLFICLICLRTYLGFRYIYVRLLKSALPYEESSWYDGQVWVKNINY 122

Query: 180 LARDRLLGSYTVKPVLSRLK 200
           L +DRL+  YTV P+LSRLK
Sbjct: 123 LIKDRLVADYTVLPILSRLK 136

BLAST of CmoCh09G003350 vs. TrEMBL
Match: A0A0A0L3Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646010 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 3.3e-127
Identity = 232/268 (86.57%), Postives = 243/268 (90.67%), Query Frame = 1

Query: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPG  SP TF  S PN RPLISPF N R  HLRNS SR+ LSFSFRKG+N+P +TGC
Sbjct: 1   MYILPGSASPPTFLLSVPNSRPLISPFTNTRLLHLRNSVSRMPLSFSFRKGSNVPPETGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLS SFPFSWA GDIVE+CSRLVATGASFALFIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSASFPFSWAAGDIVEFCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           DPL  SLCAVSSGILFVTIAV+RMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTA+VL
Sbjct: 121 DPLKLSLCAVSSGILFVTIAVLRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSS 240
           ARDRLLGSYTVKPVL+RLKYTLVSLAASLFVSI+VLINIDG +LLGPFFTGK AA+D   
Sbjct: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINIDGGELLGPFFTGKSAANDGGG 240

Query: 241 RVIPGVYSDESARSFEPDAFCGRGEDDL 269
           RVIPGVYSDESARSFEPDAFCG GE DL
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGPGEHDL 268

BLAST of CmoCh09G003350 vs. TrEMBL
Match: F6H3P4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g01320 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.8e-92
Identity = 185/259 (71.43%), Postives = 202/259 (77.99%), Query Frame = 1

Query: 13  FFPSAPNPRPLISPFKNPRPFHLRNSP---SRISLSFSFRKGNNMPSDTGCPVPPEQLPI 72
           FFPS PN  P I+P KNP   H R+     SRI LS SF  G+N P +T CPVP +Q PI
Sbjct: 17  FFPSKPNFLPPINPIKNPS-LHYRDQKILISRIPLSSSFTNGSNTPPETECPVPLDQQPI 76

Query: 73  NEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDPLSRSLCA 132
           NEYQTLSTSFPFSWA GD VEYCSRL  TG SFALFIGLPVAWFG VG +S+PL R L A
Sbjct: 77  NEYQTLSTSFPFSWASGDFVEYCSRLAVTGVSFALFIGLPVAWFGAVGPDSEPLKRILGA 136

Query: 133 VSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSY 192
           VSSGI  VT+AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGS+
Sbjct: 137 VSSGIFVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSF 196

Query: 193 TVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSSRVIPGVYSD 252
           +VKPVLSRLKYTLV+LAASLFV   +LINI+GSQ           ++    R IPGVY+D
Sbjct: 197 SVKPVLSRLKYTLVTLAASLFVCAFLLINIEGSQR-----NLNIVSNGGGGRAIPGVYND 256

Query: 253 ESARSFEPDAFCGRGEDDL 269
           +SARSFEPDAFC  GE DL
Sbjct: 257 DSARSFEPDAFC--GEPDL 267

BLAST of CmoCh09G003350 vs. TrEMBL
Match: B9RRS9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0797580 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 4.4e-87
Identity = 178/267 (66.67%), Postives = 203/267 (76.03%), Query Frame = 1

Query: 4   LPGKPSPATFFPSAPNPRPLISPFKNPR--PFHLRNSPSRISLSFSFRKGNNMPSDTGCP 63
           L  KP P  FFPS PN    I PF  P+    H RN   ++ LS SFR G+N PS+T CP
Sbjct: 8   LSPKPLPIFFFPSTPNLLSPIFPFSKPKFNQRHCRNLIPKLPLS-SFRNGSNTPSETECP 67

Query: 64  VPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESD 123
           VP EQ PINEYQ+LSTSFPFSW   +IVEYCSRL  TGASFALFIGLPVAWFG+V  ES+
Sbjct: 68  VPLEQQPINEYQSLSTSFPFSWPASNIVEYCSRLFVTGASFALFIGLPVAWFGSVRPESE 127

Query: 124 PLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLA 183
           P    + A SSGIL V++AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLA
Sbjct: 128 PFKPIIAAASSGILLVSLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLA 187

Query: 184 RDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSSR 243
           RDRLLGS++VKPVLSRLKYTL++LA  L   +++ INI+G+Q  G + T +   D    R
Sbjct: 188 RDRLLGSFSVKPVLSRLKYTLLTLATLLLGCVVLFINIEGAQ-KGVYVTSEATRD----R 247

Query: 244 VIPGVYSDESARSFEPDAFCGRGEDDL 269
            IPGVY+D+SARSFEPDAFC  GE DL
Sbjct: 248 TIPGVYNDDSARSFEPDAFC--GEPDL 266

BLAST of CmoCh09G003350 vs. TrEMBL
Match: A0A059CUR1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03046 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.4e-85
Identity = 171/258 (66.28%), Postives = 192/258 (74.42%), Query Frame = 1

Query: 8   PSPATFFPSAPNPRPLISPFKNPRPFH-LRNSPSRISL--SFSFRKGNNMPSDTGCPVPP 67
           P P  FFPS   P  LIS F   RP H L  + + +    S SFR G N PS+T CPVP 
Sbjct: 14  PQPTLFFPSTNTPTTLISFFGTSRPSHGLHRNQTFLPRIPSSSFRNGRNTPSETECPVPL 73

Query: 68  EQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDPLS 127
           EQ PINEYQ LSTSFPFSWA GD VEYCSRL  TGASFAL +GLPVAW G    ES+ + 
Sbjct: 74  EQQPINEYQNLSTSFPFSWAAGDFVEYCSRLFVTGASFALLVGLPVAWLGAPSPESEAVK 133

Query: 128 RSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDR 187
           R L AVSSG + VT+AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ+WVKTAEVLARDR
Sbjct: 134 RILGAVSSGFVVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQVWVKTAEVLARDR 193

Query: 188 LLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSSRVIP 247
           LLGS++VKPVLS+LKYTLV+LA SLF  + +L+NI+ SQ          + ++S  R IP
Sbjct: 194 LLGSFSVKPVLSKLKYTLVTLAVSLFACVFLLVNIEESQK-----AFNKSLEESRERAIP 253

Query: 248 GVYSDESARSFEPDAFCG 263
           GVY DESARSFEPDAFCG
Sbjct: 254 GVYRDESARSFEPDAFCG 266

BLAST of CmoCh09G003350 vs. TrEMBL
Match: M5XNJ5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010221mg PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 7.0e-85
Identity = 167/262 (63.74%), Postives = 197/262 (75.19%), Query Frame = 1

Query: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           +Y  P  P P   FPSAP    + +P       H    P +I LS SFR G+N P++TGC
Sbjct: 6   LYTSPKPPPPTLLFPSAPT---ISTPSFRYHRRHCSRIP-KIPLSSSFRNGSNSPAETGC 65

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120
           PVPPEQ PINE+Q LSTSFPFSWA GD++EYCSRL+ATG+SFAL +GLPVA  G +G +S
Sbjct: 66  PVPPEQQPINEFQNLSTSFPFSWASGDLIEYCSRLIATGSSFALLVGLPVASVGALGAQS 125

Query: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           +PL +SL AVSSG L VT+AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ+WVKTAEVL
Sbjct: 126 EPLKQSLYAVSSGFLVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQMWVKTAEVL 185

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSS 240
           ARDRLLGS+ V PVL RLK TLV LAA++   +++LI+IDG              +++ +
Sbjct: 186 ARDRLLGSFAVTPVLGRLKVTLVCLAAAILSCVVLLISIDGGG----------QTEEAGN 245

Query: 241 RVIPGVYSDESARSFEPDAFCG 263
           RVI GVYSDESARSFEPDAFCG
Sbjct: 246 RVIHGVYSDESARSFEPDAFCG 253

BLAST of CmoCh09G003350 vs. TAIR10
Match: AT5G11840.1 (AT5G11840.1 Protein of unknown function (DUF1230))

HSP 1 Score: 279.3 bits (713), Expect = 2.6e-75
Identity = 152/260 (58.46%), Postives = 185/260 (71.15%), Query Frame = 1

Query: 17  APNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKG--NNMPS------DTGCPVPPEQLP 76
           +P    L  P ++ R  H   SP     S   + G  N+ P       +T CPVPPEQ P
Sbjct: 10  SPITSSLKPPSRHRRFLHHNLSPKTPLQSSLIKFGAENSEPQPPRPLPETDCPVPPEQQP 69

Query: 77  INEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDPLSRSLC 136
           INEYQ+LSTSFPFSWA GD++EY +RL  TGASFA F+GLPV+WFG++G E +P+ R L 
Sbjct: 70  INEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFFVGLPVSWFGSIGPEYEPVKRILA 129

Query: 137 AVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGS 196
           A SSGI  VT+AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ+WVKT EVLARDRLLGS
Sbjct: 130 ASSSGIFVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQVWVKTPEVLARDRLLGS 189

Query: 197 YTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSSRVIPGVYS 256
           ++VKPVL+RLK TLV L     +S+I++IN+  S +   + T +    D SS  IPG Y+
Sbjct: 190 FSVKPVLARLKNTLVILG----LSLILVINLGDSPIATSYRTYR-DPRDRSSLPIPGAYN 249

Query: 257 DESARSFEPDAFCGRGEDDL 269
           DE+AR+FEP+AFCG    DL
Sbjct: 250 DETARTFEPEAFCGEPSSDL 264

BLAST of CmoCh09G003350 vs. TAIR10
Match: AT5G67370.1 (AT5G67370.1 Protein of unknown function (DUF1230))

HSP 1 Score: 135.6 bits (340), Expect = 4.7e-32
Identity = 79/174 (45.40%), Postives = 104/174 (59.77%), Query Frame = 1

Query: 43  SLSFSFRKGNNMPSDTGCPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASF 102
           S+SFS   G +    +   VP +Q P+NEY +L     +SW      E+  RL       
Sbjct: 70  SMSFS---GQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYSWGELGPSEFFIRLGGLWLVT 129

Query: 103 ALFIGLPVAWFGTVGVESDPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEY 162
              +G+PVA   +     +PL   L A +  +  V++ V+R+YLGW+YVG+RLLSA + Y
Sbjct: 130 FTVLGVPVA-AASFNPSREPLRFILAAGTGTLFLVSLIVLRIYLGWSYVGDRLLSAVIPY 189

Query: 163 EETGWYDGQIWVKTAEVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVL 217
           EE+GWYDGQ+WVK  EVLARDRLLGSY VKPV+  LK TL+   A L VS  VL
Sbjct: 190 EESGWYDGQMWVKPPEVLARDRLLGSYKVKPVIKMLKQTLIGTGA-LLVSAFVL 238

BLAST of CmoCh09G003350 vs. NCBI nr
Match: gi|659103819|ref|XP_008452715.1| (PREDICTED: uncharacterized protein ycf36 [Cucumis melo])

HSP 1 Score: 464.2 bits (1193), Expect = 1.6e-127
Identity = 233/268 (86.94%), Postives = 244/268 (91.04%), Query Frame = 1

Query: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYIL G   P TF  SAPN RPLI PF N RP HLRNS SRISLSFSFRKG+N+P +TGC
Sbjct: 1   MYILLGTAPPPTFLLSAPNSRPLILPFTNTRPLHLRNSVSRISLSFSFRKGSNVPPETGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWA GDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           DPL R LCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTA+VL
Sbjct: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSS 240
           ARDRLLGSYTVKPVL+RLKYTLVSLAASLFVSI+VLINIDG +LLGPFFTGK AA++   
Sbjct: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINIDGGELLGPFFTGKSAANEDGG 240

Query: 241 RVIPGVYSDESARSFEPDAFCGRGEDDL 269
           RV+PG+YSDESARSFEPDAFCG GE DL
Sbjct: 241 RVVPGIYSDESARSFEPDAFCGPGELDL 268

BLAST of CmoCh09G003350 vs. NCBI nr
Match: gi|449447116|ref|XP_004141315.1| (PREDICTED: uncharacterized protein ycf36 [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 4.8e-127
Identity = 232/268 (86.57%), Postives = 243/268 (90.67%), Query Frame = 1

Query: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPG  SP TF  S PN RPLISPF N R  HLRNS SR+ LSFSFRKG+N+P +TGC
Sbjct: 1   MYILPGSASPPTFLLSVPNSRPLISPFTNTRLLHLRNSVSRMPLSFSFRKGSNVPPETGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLS SFPFSWA GDIVE+CSRLVATGASFALFIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSASFPFSWAAGDIVEFCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           DPL  SLCAVSSGILFVTIAV+RMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTA+VL
Sbjct: 121 DPLKLSLCAVSSGILFVTIAVLRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSS 240
           ARDRLLGSYTVKPVL+RLKYTLVSLAASLFVSI+VLINIDG +LLGPFFTGK AA+D   
Sbjct: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINIDGGELLGPFFTGKSAANDGGG 240

Query: 241 RVIPGVYSDESARSFEPDAFCGRGEDDL 269
           RVIPGVYSDESARSFEPDAFCG GE DL
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGPGEHDL 268

BLAST of CmoCh09G003350 vs. NCBI nr
Match: gi|225429556|ref|XP_002279783.1| (PREDICTED: uncharacterized protein ycf36 [Vitis vinifera])

HSP 1 Score: 345.1 bits (884), Expect = 1.1e-91
Identity = 185/259 (71.43%), Postives = 202/259 (77.99%), Query Frame = 1

Query: 13  FFPSAPNPRPLISPFKNPRPFHLRNSP---SRISLSFSFRKGNNMPSDTGCPVPPEQLPI 72
           FFPS PN  P I+P KNP   H R+     SRI LS SF  G+N P +T CPVP +Q PI
Sbjct: 17  FFPSKPNFLPPINPIKNPS-LHYRDQKILISRIPLSSSFTNGSNTPPETECPVPLDQQPI 76

Query: 73  NEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDPLSRSLCA 132
           NEYQTLSTSFPFSWA GD VEYCSRL  TG SFALFIGLPVAWFG VG +S+PL R L A
Sbjct: 77  NEYQTLSTSFPFSWASGDFVEYCSRLAVTGVSFALFIGLPVAWFGAVGPDSEPLKRILGA 136

Query: 133 VSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSY 192
           VSSGI  VT+AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGS+
Sbjct: 137 VSSGIFVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSF 196

Query: 193 TVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSSRVIPGVYSD 252
           +VKPVLSRLKYTLV+LAASLFV   +LINI+GSQ           ++    R IPGVY+D
Sbjct: 197 SVKPVLSRLKYTLVTLAASLFVCAFLLINIEGSQR-----NLNIVSNGGGGRAIPGVYND 256

Query: 253 ESARSFEPDAFCGRGEDDL 269
           +SARSFEPDAFC  GE DL
Sbjct: 257 DSARSFEPDAFC--GEPDL 267

BLAST of CmoCh09G003350 vs. NCBI nr
Match: gi|1009134449|ref|XP_015884453.1| (PREDICTED: uncharacterized protein LOC107420101 [Ziziphus jujuba])

HSP 1 Score: 340.9 bits (873), Expect = 2.1e-90
Identity = 182/260 (70.00%), Postives = 203/260 (78.08%), Query Frame = 1

Query: 5   PGKPSPATFFPSAPNP--RPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGCPV 64
           P  PS  +   S PNP  +P   P  +    H R+S   I LS SFR G+N PS+T CPV
Sbjct: 56  PSNPSYLSPLISIPNPNSKPPQHPNHSHSHSHRRHSKKFIPLS-SFRNGSNRPSETECPV 115

Query: 65  PPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESDP 124
           P EQ PINEYQ L+TSFPFSWA GD VEYCSRLVATGASFALFIGLPVAWFG VG +S+P
Sbjct: 116 PVEQQPINEYQNLATSFPFSWASGDFVEYCSRLVATGASFALFIGLPVAWFGAVGPDSEP 175

Query: 125 LSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLAR 184
           L RSLCAVSSGIL VT+AV+RMYLGWAYVGNRLLSATVEYEETGWYDGQ+WVKTAEVLAR
Sbjct: 176 LKRSLCAVSSGILVVTVAVLRMYLGWAYVGNRLLSATVEYEETGWYDGQMWVKTAEVLAR 235

Query: 185 DRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSSRV 244
           DRLLGS++VKPVLSRLKYTLVSLA SL V I+ L+N+D +Q        K +      RV
Sbjct: 236 DRLLGSFSVKPVLSRLKYTLVSLAVSLLVCIVFLVNVDETQ--------KGSIGKDGVRV 295

Query: 245 IPGVYSDESARSFEPDAFCG 263
           IPGVY+D+SARSFEPDAFCG
Sbjct: 296 IPGVYNDDSARSFEPDAFCG 306

BLAST of CmoCh09G003350 vs. NCBI nr
Match: gi|223544268|gb|EEF45789.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 329.3 bits (843), Expect = 6.3e-87
Identity = 178/267 (66.67%), Postives = 203/267 (76.03%), Query Frame = 1

Query: 4   LPGKPSPATFFPSAPNPRPLISPFKNPR--PFHLRNSPSRISLSFSFRKGNNMPSDTGCP 63
           L  KP P  FFPS PN    I PF  P+    H RN   ++ LS SFR G+N PS+T CP
Sbjct: 8   LSPKPLPIFFFPSTPNLLSPIFPFSKPKFNQRHCRNLIPKLPLS-SFRNGSNTPSETECP 67

Query: 64  VPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVESD 123
           VP EQ PINEYQ+LSTSFPFSW   +IVEYCSRL  TGASFALFIGLPVAWFG+V  ES+
Sbjct: 68  VPLEQQPINEYQSLSTSFPFSWPASNIVEYCSRLFVTGASFALFIGLPVAWFGSVRPESE 127

Query: 124 PLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLA 183
           P    + A SSGIL V++AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLA
Sbjct: 128 PFKPIIAAASSGILLVSLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLA 187

Query: 184 RDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSSR 243
           RDRLLGS++VKPVLSRLKYTL++LA  L   +++ INI+G+Q  G + T +   D    R
Sbjct: 188 RDRLLGSFSVKPVLSRLKYTLLTLATLLLGCVVLFINIEGAQ-KGVYVTSEATRD----R 247

Query: 244 VIPGVYSDESARSFEPDAFCGRGEDDL 269
            IPGVY+D+SARSFEPDAFC  GE DL
Sbjct: 248 TIPGVYNDDSARSFEPDAFC--GEPDL 266

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YCF36_CYAPA1.9e-2744.14Uncharacterized protein ycf36 OS=Cyanophora paradoxa GN=ycf36 PE=3 SV=1[more]
YCF36_PORPU3.4e-2441.50Uncharacterized protein ycf36 OS=Porphyra purpurea GN=ycf36 PE=3 SV=1[more]
YCF36_PYRYE3.8e-2339.75Uncharacterized protein ycf36 OS=Pyropia yezoensis GN=ycf36 PE=3 SV=1[more]
YCF36_GUITH4.6e-2139.29Uncharacterized protein ycf36 OS=Guillardia theta GN=ycf36 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L3Z3_CUCSA3.3e-12786.57Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646010 PE=4 SV=1[more]
F6H3P4_VITVI7.8e-9271.43Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g01320 PE=4 SV=... [more]
B9RRS9_RICCO4.4e-8766.67Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0797580 PE=4 SV=1[more]
A0A059CUR1_EUCGR2.4e-8566.28Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03046 PE=4 SV=1[more]
M5XNJ5_PRUPE7.0e-8563.74Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010221mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G11840.12.6e-7558.46 Protein of unknown function (DUF1230)[more]
AT5G67370.14.7e-3245.40 Protein of unknown function (DUF1230)[more]
Match NameE-valueIdentityDescription
gi|659103819|ref|XP_008452715.1|1.6e-12786.94PREDICTED: uncharacterized protein ycf36 [Cucumis melo][more]
gi|449447116|ref|XP_004141315.1|4.8e-12786.57PREDICTED: uncharacterized protein ycf36 [Cucumis sativus][more]
gi|225429556|ref|XP_002279783.1|1.1e-9171.43PREDICTED: uncharacterized protein ycf36 [Vitis vinifera][more]
gi|1009134449|ref|XP_015884453.1|2.1e-9070.00PREDICTED: uncharacterized protein LOC107420101 [Ziziphus jujuba][more]
gi|223544268|gb|EEF45789.1|6.3e-8766.67conserved hypothetical protein [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009631CGLD27-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G003350.1CmoCh09G003350.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009631Uncharacterised protein family Ycf36PRODOMPD016444coord: 60..203
score: 2.0
IPR009631Uncharacterised protein family Ycf36PFAMPF06799DUF1230coord: 60..203
score: 4.0
NoneNo IPR availablePANTHERPTHR34214FAMILY NOT NAMEDcoord: 13..262
score: 6.6E
NoneNo IPR availablePANTHERPTHR34214:SF1SUBFAMILY NOT NAMEDcoord: 13..262
score: 6.6E

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh09G003350Watermelon (97103) v2cmowmbB038
CmoCh09G003350Watermelon (97103) v2cmowmbB023
CmoCh09G003350Wax gourdcmowgoB0005
CmoCh09G003350Wax gourdcmowgoB0038
CmoCh09G003350Cucurbita maxima (Rimu)cmacmoB435
CmoCh09G003350Cucurbita moschata (Rifu)cmocmoB033
CmoCh09G003350Cucurbita moschata (Rifu)cmocmoB004
CmoCh09G003350Cucurbita moschata (Rifu)cmocmoB014
CmoCh09G003350Cucumber (Gy14) v1cgycmoB0978
CmoCh09G003350Cucumber (Gy14) v1cgycmoB1083
CmoCh09G003350Cucurbita maxima (Rimu)cmacmoB164
CmoCh09G003350Cucurbita maxima (Rimu)cmacmoB755
CmoCh09G003350Wild cucumber (PI 183967)cmocpiB002
CmoCh09G003350Wild cucumber (PI 183967)cmocpiB038
CmoCh09G003350Cucumber (Chinese Long) v2cmocuB002
CmoCh09G003350Cucumber (Chinese Long) v2cmocuB035
CmoCh09G003350Melon (DHL92) v3.5.1cmomeB010
CmoCh09G003350Melon (DHL92) v3.5.1cmomeB012
CmoCh09G003350Watermelon (Charleston Gray)cmowcgB023
CmoCh09G003350Watermelon (97103) v1cmowmB004
CmoCh09G003350Watermelon (97103) v1cmowmB007
CmoCh09G003350Cucurbita pepo (Zucchini)cmocpeB006
CmoCh09G003350Cucurbita pepo (Zucchini)cmocpeB020
CmoCh09G003350Cucurbita pepo (Zucchini)cmocpeB034
CmoCh09G003350Bottle gourd (USVL1VR-Ls)cmolsiB020
CmoCh09G003350Cucumber (Gy14) v2cgybcmoB002
CmoCh09G003350Cucumber (Gy14) v2cgybcmoB138
CmoCh09G003350Cucumber (Gy14) v2cgybcmoB433
CmoCh09G003350Cucumber (Gy14) v2cgybcmoB872
CmoCh09G003350Melon (DHL92) v3.6.1cmomedB009
CmoCh09G003350Melon (DHL92) v3.6.1cmomedB012
CmoCh09G003350Silver-seed gourdcarcmoB0127
CmoCh09G003350Silver-seed gourdcarcmoB0255
CmoCh09G003350Silver-seed gourdcarcmoB1040
CmoCh09G003350Cucumber (Chinese Long) v3cmocucB0004
CmoCh09G003350Cucumber (Chinese Long) v3cmocucB0042