CmoCh09G003040 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGAAACTAAATGGGATGTTCCTGATAAGACTGTGCACACCATATTGGATGTCTCGTTTGCAATGGTTGGTGTTTTCGCCAGATACTGATGCAGGGGGTGGGCAACTTCCTCAACATACTCTACACAAATAATGGATCAAGTTCTTTCCAATTGGCATTTCTTTTCCAGTAGGTTTGCTTATAGGTGAGCAGGTGGGTGTTAACCCCATGATGATGTGCATTTTTTAGCATTTGGGTCTCATGATTACTATCATCCCATTCTTTTCTCATTAATGTCCACTTTTGTTGTAACATTTGTTTATGCAAGTAGCTCTTTAGAATCATGCTTTCTAGTAATAGAGAGGCCAATGGATTATGATTTATGATTTCTTTTGCCCATCATGTAATAGCCTAATCATGTAATAGCCTAAGTCTACCGCTAGCAAATATTGTCTTCTTTCCCTTTCGAACTTTCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTATAAGGAATGTTTCGTTCCCCTCTCAAACTGACGTGGGATCTCACAATCTACTCTCCTTGTTCCATTTCCTACTAACCTCAAATATATTGGAATGCCCCATTGTCTTCACTTTTCATTATTAACAGAAAAACCATCCCTACTTTTCAAGTTAAACATGTATTGTTTCAGATTCATTTTCCAACCTCCTGGAAATTTCTGGTATTTTGACTGATATTATTATTTATGCTTCCATCATATTTTGGTAGAATTATGAAGAGAGAGAGAGAGAGTAAAAGCTGAAGTGAGAAGGAAGGATGATAGGGCAGCTGCCAGCTATAAGAGGCGGCAAATACATTCGTGCAGGCCCCATAGGACCATTGAGGGTATGGCATAATCTTACAAGCTGCTTTCAAATTTGCTTTTGTTTTTGTTTTACTGCCTCTGATTTTGAATGTGTCTTTGTAATTGTATGAGCCCAAATCATGATTTGCCTATGCACGTTTTGTTAGGCAACTTTTGTTTATCTTTTTCTTCTATAAAGATCAATGTTTTGAGATTAATTTCCACTGTTCTTTCAACGAGATTTATACCACCAAATTTGTCGGCAATTTAACAGTGTCAAGGGCATGCTTCAAAATTCAACCCTTAATTATTAAAACAGGGTCGGTAGAAGATGCTTGTTTGGAACTTATAAGCTCCTATAGCTTGGAGCTTTCATAACTCTGTCTCTGTCTCTGTTTCTGATTCTGATTCAGCCACAGACACCGCTTCAAATCTCATCTTTCATGGCTGCCATTACTTCCACCTGCAGTAGCTTCTTCTCCATCAGATCAAGTTCTATGGAGCCAAGAGTAAGAACTTCTTCACCAACCCATGCCTCTCCAGCATGTGGGAAGCTTGATGGTGTGGCAACTTGGCTCATCAATGGCTTTGTCACAGCTTTCTTTGGATCCTTGGAACGATGCTCTTGTATTCGTATTGCCACGGCTGAGGATGACGGCGATGAGGCAAACGACGCCCCCTTGATTCCAAACGACGGGAACCTTCAACAGGACGGCGCTGCTGCTGGCCGGAGGAGGACTGTTAAAGGCAAGAAGTGTCAGCCACTTGTAGATGCAATCTAA TGAAACTAAATGGGATGTTCCTGATAAGACTGTGCACACCATATTGGATGTCTCGTTTGCAATGGTTGGTGTTTTCGCCAGATACTGATGCAGGGGGTGGGCAACTTCCTCAACATACTCTACACAAATAATGGATCAAGTTCTTTCCAATTGGCATTTCTTTTCCAGTAGGTTTGCTTATAGAATTATGAAGAGAGAGAGAGAGAGTAAAAGCTGAAGTGAGAAGGAAGGATGATAGGGCAGCTGCCAGCTATAAGAGGCGGCAAATACATTCGTGCAGGCCCCATAGGACCATTGAGGCTTGGAGCTTTCATAACTCTGTCTCTGTCTCTGTTTCTGATTCTGATTCAGCCACAGACACCGCTTCAAATCTCATCTTTCATGGCTGCCATTACTTCCACCTGCAGTAGCTTCTTCTCCATCAGATCAAGTTCTATGGAGCCAAGAGTAAGAACTTCTTCACCAACCCATGCCTCTCCAGCATGTGGGAAGCTTGATGGTGTGGCAACTTGGCTCATCAATGGCTTTGTCACAGCTTTCTTTGGATCCTTGGAACGATGCTCTTGTATTCGTATTGCCACGGCTGAGGATGACGGCGATGAGGCAAACGACGCCCCCTTGATTCCAAACGACGGGAACCTTCAACAGGACGGCGCTGCTGCTGGCCGGAGGAGGACTGTTAAAGGCAAGAAGTGTCAGCCACTTGTAGATGCAATCTAA ATGATAGGGCAGCTGCCAGCTATAAGAGGCGGCAAATACATTCGTGCAGGCCCCATAGGACCATTGAGGCTTGGAGCTTTCATAACTCTGTCTCTGTCTCTGTTTCTGATTCTGATTCAGCCACAGACACCGCTTCAAATCTCATCTTTCATGGCTGCCATTACTTCCACCTGCAGTAGCTTCTTCTCCATCAGATCAAGTTCTATGGAGCCAAGAGTAAGAACTTCTTCACCAACCCATGCCTCTCCAGCATGTGGGAAGCTTGATGGTGTGGCAACTTGGCTCATCAATGGCTTTGTCACAGCTTTCTTTGGATCCTTGGAACGATGCTCTTGTATTCGTATTGCCACGGCTGAGGATGACGGCGATGAGGCAAACGACGCCCCCTTGATTCCAAACGACGGGAACCTTCAACAGGACGGCGCTGCTGCTGGCCGGAGGAGGACTGTTAAAGGCAAGAAGTGTCAGCCACTTGTAGATGCAATCTAA
BLAST of CmoCh09G003040 vs. TrEMBL
Match: A0A0A0L2M3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G644660 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 9.3e-45 Identity = 92/104 (88.46%), Postives = 97/104 (93.27%), Query Frame = 1
BLAST of CmoCh09G003040 vs. TrEMBL
Match: A0A061FG81_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_034666 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 5.8e-31 Identity = 76/107 (71.03%), Postives = 86/107 (80.37%), Query Frame = 1
BLAST of CmoCh09G003040 vs. TrEMBL
Match: A9PCJ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s01410g PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.7e-30 Identity = 76/106 (71.70%), Postives = 86/106 (81.13%), Query Frame = 1
BLAST of CmoCh09G003040 vs. TrEMBL
Match: E0CNZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08750 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 3.8e-30 Identity = 77/111 (69.37%), Postives = 84/111 (75.68%), Query Frame = 1
BLAST of CmoCh09G003040 vs. TrEMBL
Match: I3NMS1_HEVBR (Uncharacterized protein OS=Hevea brasiliensis PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.2e-29 Identity = 77/106 (72.64%), Postives = 83/106 (78.30%), Query Frame = 1
BLAST of CmoCh09G003040 vs. TAIR10
Match: AT4G10810.1 (AT4G10810.1 unknown protein) HSP 1 Score: 51.6 bits (122), Expect = 5.3e-07 Identity = 28/81 (34.57%), Postives = 49/81 (60.49%), Query Frame = 1
BLAST of CmoCh09G003040 vs. TAIR10
Match: AT4G24026.1 (AT4G24026.1 unknown protein) HSP 1 Score: 49.7 bits (117), Expect = 2.0e-06 Identity = 20/59 (33.90%), Postives = 37/59 (62.71%), Query Frame = 1
BLAST of CmoCh09G003040 vs. NCBI nr
Match: gi|700200131|gb|KGN55289.1| (hypothetical protein Csa_4G644660 [Cucumis sativus]) HSP 1 Score: 188.0 bits (476), Expect = 1.3e-44 Identity = 92/104 (88.46%), Postives = 97/104 (93.27%), Query Frame = 1
BLAST of CmoCh09G003040 vs. NCBI nr
Match: gi|590596857|ref|XP_007018452.1| (Uncharacterized protein TCM_034666 [Theobroma cacao]) HSP 1 Score: 142.1 bits (357), Expect = 8.4e-31 Identity = 76/107 (71.03%), Postives = 86/107 (80.37%), Query Frame = 1
BLAST of CmoCh09G003040 vs. NCBI nr
Match: gi|743912063|ref|XP_010999902.1| (PREDICTED: uncharacterized protein LOC105107610 [Populus euphratica]) HSP 1 Score: 141.0 bits (354), Expect = 1.9e-30 Identity = 76/106 (71.70%), Postives = 86/106 (81.13%), Query Frame = 1
BLAST of CmoCh09G003040 vs. NCBI nr
Match: gi|224129812|ref|XP_002320677.1| (hypothetical protein POPTR_0014s01410g [Populus trichocarpa]) HSP 1 Score: 140.6 bits (353), Expect = 2.4e-30 Identity = 76/106 (71.70%), Postives = 86/106 (81.13%), Query Frame = 1
BLAST of CmoCh09G003040 vs. NCBI nr
Match: gi|225458898|ref|XP_002285433.1| (PREDICTED: uncharacterized protein LOC100267736 [Vitis vinifera]) HSP 1 Score: 139.4 bits (350), Expect = 5.4e-30 Identity = 77/111 (69.37%), Postives = 84/111 (75.68%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |