CmoCh09G002890 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G002890
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Calcium-transporting ATPase 3, endoplasmic reticulum-type) (3.6.3.8)
LocationCmo_Chr09 : 1277123 .. 1277854 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAGAAATGCCACAACGCAGAGAAAGAGAAGATGGAAATTTTTGTTATATAAACAATCCAATTTCCATCGCCTCTTCTGCTACCTGATACCAAAAATTCCCTCAAAGCCTAACCACTGAATTGCCACCATGAATGATTGGTCTGCTACACATTATTGCAGTGGAGGTGAATCAGGTTGGACTATGTACTTAGACCAATCCTATACTTCAGACCATCGTTTCGGCGGCGGGGTTGATGGGGTAAAGGAAGCAAAAGCAAGAGCAGAGGAGGCGGATGAAGAAGATCTATCAATGGTGTCTGATGCTTCCTCAGGTCCACCACATTACCTTGAGGACAACGAAGAATTGTTTTACAATAATGGGTATTCTTCCTATGCCTATTCAGCTTCAGATTCAACAATAAATTGCAGCAAGGAGGAGAAAAAGAAGAGCAAGAAAAGCAAACAAAATGGCAGAAATCAGCAACCTTCTTACCTTGATGACACTGCTAGCTCCCCTGTATATGGCTACGGCAAAGCAAGCGTAAACAACAGTTCCATCAGATTCTTCCGTGTAGGTCCAAGAATTCTTCTATCGTTCTAATGTTGTTGATTGTTCATCGTGCAGAAAATCAAGGCAGCAACAAGCAACAAAGCTTCGGAGGAGAATCCAGTTGATTTTTCTCAGGGATTCTCAGCAACCCACTTTAAGGTAAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTAA

mRNA sequence

AATAGAAATGCCACAACGCAGAGAAAGAGAAGATGGAAATTTTTGTTATATAAACAATCCAATTTCCATCGCCTCTTCTGCTACCTGATACCAAAAATTCCCTCAAAGCCTAACCACTGAATTGCCACCATGAATGATTGGTCTGCTACACATTATTGCAGTGGAGGTGAATCAGGTTGGACTATGTACTTAGACCAATCCTATACTTCAGACCATCGTTTCGGCGGCGGGGTTGATGGGGTAAAGGAAGCAAAAGCAAGAGCAGAGGAGGCGGATGAAGAAGATCTATCAATGGTGTCTGATGCTTCCTCAGGTCCACCACATTACCTTGAGGACAACGAAGAATTGTTTTACAATAATGGGTATTCTTCCTATGCCTATTCAGCTTCAGATTCAACAATAAATTGCAGCAAGGAGGAGAAAAAGAAGAGCAAGAAAAGCAAACAAAATGGCAGAAATCAGCAACCTTCTTACCTTGATGACACTGCTAGCTCCCCTGTATATGGCTACGGCAAAGCAAGCAAAATCAAGGCAGCAACAAGCAACAAAGCTTCGGAGGAGAATCCAGTTGATTTTTCTCAGGGATTCTCAGCAACCCACTTTAAGGTAAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTAA

Coding sequence (CDS)

ATGAATGATTGGTCTGCTACACATTATTGCAGTGGAGGTGAATCAGGTTGGACTATGTACTTAGACCAATCCTATACTTCAGACCATCGTTTCGGCGGCGGGGTTGATGGGGTAAAGGAAGCAAAAGCAAGAGCAGAGGAGGCGGATGAAGAAGATCTATCAATGGTGTCTGATGCTTCCTCAGGTCCACCACATTACCTTGAGGACAACGAAGAATTGTTTTACAATAATGGGTATTCTTCCTATGCCTATTCAGCTTCAGATTCAACAATAAATTGCAGCAAGGAGGAGAAAAAGAAGAGCAAGAAAAGCAAACAAAATGGCAGAAATCAGCAACCTTCTTACCTTGATGACACTGCTAGCTCCCCTGTATATGGCTACGGCAAAGCAAGCAAAATCAAGGCAGCAACAAGCAACAAAGCTTCGGAGGAGAATCCAGTTGATTTTTCTCAGGGATTCTCAGCAACCCACTTTAAGGTAAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTAA
Homology
[Close]
BLAST of CmoCh09G002890 vs. TrEMBL
Match: A0A0A0KZY5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G643100 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.1e-56
Identity = 127/172 (73.84%), Postives = 136/172 (79.07%), Query Frame = 1 

Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGG--------VDGVKEAKARAEEADEE- 60
           MNDWSA+HYCSG ESGWTMYLDQSYTSDH F GG            K AKAR EE DEE 
Sbjct: 1   MNDWSASHYCSGSESGWTMYLDQSYTSDHCFNGGSGRGENYKAKAAKAAKARKEEEDEEE 60

Query: 61  DLSMVSDASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQ 120
           DLSMVSDASSGPPHY+EDNEELFYNNGYSS+  SAS+        E+KKSKK KQNGRNQ
Sbjct: 61  DLSMVSDASSGPPHYIEDNEELFYNNGYSSHVISASEL-------ERKKSKKGKQNGRNQ 120

Query: 121 QPSYLDDTASSPVYGYGKASKIKAATSNKASEENPVDFSQGFSATHFKVNSS 164
           Q SYLDDTASSPVYGY KA+KIKAAT+NKA EE+ VDFSQGFSATHFK  S+
Sbjct: 121 QHSYLDDTASSPVYGYTKANKIKAATNNKALEESQVDFSQGFSATHFKRKSA 165

[Close]
BLAST of CmoCh09G002890 vs. TrEMBL
Match: M5Y9G7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012205mg PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.2e-23
Identity = 78/155 (50.32%), Postives = 99/155 (63.87%), Query Frame = 1 

Query: 11  SGGESGWTMYLDQSYTSDHRF--GGGVDGVKEAKARAEEADEEDLSMVSDASSGPPHYLE 70
           SG ESGWT YLDQSY S  +F   GG+   + AK   EE +EEDLSMVSDASSGPPHY +
Sbjct: 10  SGCESGWTHYLDQSYFSQSQFQRAGGIADYEGAKTEVEEEEEEDLSMVSDASSGPPHYHD 69

Query: 71  DNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTASSPVYGYG 130
            +E+  Y NG S   +S S      SK  KK  KK K++GR Q   +LDDTASSPV  Y 
Sbjct: 70  LDEDCLYENGCS---FSVSWG----SKLGKKSKKKGKESGREQ---HLDDTASSPVLNYS 129

Query: 131 KASKIKAATSNKASEENPVDFSQGFSATHFKVNSS 164
           K  K+   + +++S +N + +S+GFSATH K  S+
Sbjct: 130 K-KKLSTLSKDESSMQNVLGYSEGFSATHMKGKSA 153

[Close]
BLAST of CmoCh09G002890 vs. TrEMBL
Match: A0A0L9UH32_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g241300 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.4e-22
Identity = 80/163 (49.08%), Postives = 96/163 (58.90%), Query Frame = 1 

Query: 3   DWSATHYCSGGESGWTMYLDQSYTSDHRFG--GGVDGVKEAKARAEEADEEDLSMVSDAS 62
           D S++ Y S  ESGWT YLDQS  S+  F   GG+   +   A  EE +EEDLSM+SDAS
Sbjct: 2   DISSSQYNSADESGWTHYLDQSSLSESYFQRRGGIVHYEGKGATMEEEEEEDLSMISDAS 61

Query: 63  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 122
           SGPPHY ED+++    N YSS ++   +S       EKKK  K K+ G NQ PS LDDTA
Sbjct: 62  SGPPHYHEDDDQHNCVNWYSSSSHHTKES-------EKKKKNKVKEYGNNQHPSTLDDTA 121

Query: 123 SSPVYGYGKAS---KIKAATSNKASEENPVDFSQGFSATHFKV 161
           SSPV    KAS     KA+ S   + EN VDF   FS T  KV
Sbjct: 122 SSPVLNCAKASHKENKKASFSGNGAVENAVDFPPCFSGTKVKV 157

[Close]
BLAST of CmoCh09G002890 vs. TrEMBL
Match: B9R6Y6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1587010 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.4e-22
Identity = 80/154 (51.95%), Postives = 103/154 (66.88%), Query Frame = 1 

Query: 11  SGGESGWTMYLDQSYTSDHR---FGGGVDGVKEAKARAEEAD--EEDLSMVSDASSGPPH 70
           SG ESGWT+YLDQS  S ++   FGG VDG + A+A  ++ D  EEDLSMVSDASSGPPH
Sbjct: 11  SGCESGWTLYLDQSSLSKNQYQNFGGFVDGNEYARAENDDDDYEEEDLSMVSDASSGPPH 70

Query: 71  YLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTASSPVY 130
           Y ED+E+         Y Y +S    N +K++ K+ ++S+Q    QQ SYLDDTASSPV 
Sbjct: 71  YCEDDED--------QYCYDSSKK--NKNKQKCKEYRRSQQ----QQYSYLDDTASSPV- 130

Query: 131 GYGKASKIKAATSNKASEENPVDFSQGFSATHFK 160
                SK  A  +N+AS ++ ++FSQGFSATHFK
Sbjct: 131 ----LSKKAAGKNNEASVDHVLEFSQGFSATHFK 145

[Close]
BLAST of CmoCh09G002890 vs. TrEMBL
Match: A5C0N4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024777 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.9e-22
Identity = 80/164 (48.78%), Postives = 102/164 (62.20%), Query Frame = 1 

Query: 6   ATHYCSGGESGWTMYLDQSYTSD---HRFGGGVDG-VKEAKARAEEADEEDLSMVSDASS 65
           A+   SG ESGWT+YL+ S+ S    HR  G VDG VK  K  AEE +EEDLSMVSDASS
Sbjct: 5   ASECSSGCESGWTLYLEHSFLSADPLHRGSGFVDGEVKRGKDEAEEEEEEDLSMVSDASS 64

Query: 66  GPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQ--PSYLDDT 125
           GPPH+ ED      +NG   Y +S + + +   K   K+ K     GR +Q  PS+LDDT
Sbjct: 65  GPPHFQEDEGYCNDDNG-CFYPHSMAATLV---KNNGKRQKIRTHRGRVEQEDPSFLDDT 124

Query: 126 ASSPVYGYGKASKIKAATSNKASEENPVDFSQGFSATHFKVNSS 164
           ASSP++ + K +      +N+AS E+ +DFSQGFS THFKV  S
Sbjct: 125 ASSPLFNFSKNNGF-TLNNNQASMESVLDFSQGFSTTHFKVKLS 163

[Close]
BLAST of CmoCh09G002890 vs. TAIR10
Match: AT4G33800.1 (AT4G33800.1 unknown protein)

HSP 1 Score: 68.6 bits (166), Expect = 4.4e-12
Identity = 59/164 (35.98%), Postives = 86/164 (52.44%), Query Frame = 1 

Query: 11  SGGESGWTMYLDQSYTSDH----RFGGGVDGVKEAKA--------RAEEADEEDLSMVSD 70
           SG ESGWT+YLDQS +S      R   G D  + +K         + EE +E+DLSM+SD
Sbjct: 6   SGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISD 65

Query: 71  ASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDD 130
           ASSGP +  E++                S   IN    +K+  ++ K+    +  S LDD
Sbjct: 66  ASSGPRNISEED----------------SVKKINIVGLKKQCKREKKRRDYEKMNSLLDD 125

Query: 131 TASSPVYGYGKASKIKAATSNKASE---ENPVDFSQGFSATHFK 160
           TASSP++ +    + K+   NK  +   E+ +D+SQGFSAT F+
Sbjct: 126 TASSPLFNFPHMLQ-KSVGGNKIEQTFPESTLDYSQGFSATQFQ 152

[Close]
BLAST of CmoCh09G002890 vs. TAIR10
Match: AT1G58460.1 (AT1G58460.1 unknown protein)

HSP 1 Score: 48.9 bits (115), Expect = 3.6e-06
Identity = 55/167 (32.93%), Postives = 75/167 (44.91%), Query Frame = 1 

Query: 3   DWSATHYCSGGESGWTMYLDQSYT-SDHRFGGGVDGVKEAKARAEEADEEDLSMVSDASS 62
           D+S   Y   G+SGWTMYL  S + S H F              ++  +ED SMVSDASS
Sbjct: 2   DFSDLDYSDAGDSGWTMYLGHSSSVSLHHFD-------YHNGETKQEHDEDSSMVSDASS 61

Query: 63  GPPHYLED---NEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDD 122
           GPP+Y E+    + L  N  Y   + S        +K + KK    +Q    +  S  DD
Sbjct: 62  GPPYYCEETVHEDHLQQNTQYWCKSKSK-------NKNKNKKKVHEEQGYSERFNSSFDD 121

Query: 123 TASSPVYGYGKASKIKAATSNKASEENPVDFSQGFSATHF---KVNS 163
           TASS   G     ++ A   ++   +   DF Q +S       KVNS
Sbjct: 122 TASSLPVG----EEVSAHKQHQNQYQRFHDFCQSYSTRRICKEKVNS 150

[Close]
BLAST of CmoCh09G002890 vs. NCBI nr
Match: gi|659103619|ref|XP_008452653.1| (PREDICTED: uncharacterized protein LOC103493609 [Cucumis melo])

HSP 1 Score: 238.8 bits (608), Expect = 7.0e-60
Identity = 131/170 (77.06%), Postives = 139/170 (81.76%), Query Frame = 1 

Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDG-----VKEAKARAEEAD--EEDL 60
           MNDWSATHYCSG ESGWTMYLDQSYTSDHRF GG  G      KEAKAR EE +  EEDL
Sbjct: 1   MNDWSATHYCSGSESGWTMYLDQSYTSDHRFNGGSGGSENYKAKEAKARTEEEEDEEEDL 60

Query: 61  SMVSDASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQP 120
           SMVSDASSGPPHY+EDNEELFYNNGYSSYA SAS+        E+KKS+K K+NGRNQQ 
Sbjct: 61  SMVSDASSGPPHYIEDNEELFYNNGYSSYAISASEL-------ERKKSQKGKRNGRNQQH 120

Query: 121 SYLDDTASSPVYGYGKASKIKAATSNKASEENPVDFSQGFSATHFKVNSS 164
           SYLDDTASSPVYGY KA+KI  ATSNKA EENPVDFSQGFSATHFK  S+
Sbjct: 121 SYLDDTASSPVYGYTKANKINTATSNKALEENPVDFSQGFSATHFKRKSA 163

[Close]
BLAST of CmoCh09G002890 vs. NCBI nr
Match: gi|778696455|ref|XP_011654154.1| (PREDICTED: uncharacterized protein LOC105435311 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-56
Identity = 127/172 (73.84%), Postives = 136/172 (79.07%), Query Frame = 1 

Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGG--------VDGVKEAKARAEEADEE- 60
           MNDWSA+HYCSG ESGWTMYLDQSYTSDH F GG            K AKAR EE DEE 
Sbjct: 1   MNDWSASHYCSGSESGWTMYLDQSYTSDHCFNGGSGRGENYKAKAAKAAKARKEEEDEEE 60

Query: 61  DLSMVSDASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQ 120
           DLSMVSDASSGPPHY+EDNEELFYNNGYSS+  SAS+        E+KKSKK KQNGRNQ
Sbjct: 61  DLSMVSDASSGPPHYIEDNEELFYNNGYSSHVISASEL-------ERKKSKKGKQNGRNQ 120

Query: 121 QPSYLDDTASSPVYGYGKASKIKAATSNKASEENPVDFSQGFSATHFKVNSS 164
           Q SYLDDTASSPVYGY KA+KIKAAT+NKA EE+ VDFSQGFSATHFK  S+
Sbjct: 121 QHSYLDDTASSPVYGYTKANKIKAATNNKALEESQVDFSQGFSATHFKRKSA 165

[Close]
BLAST of CmoCh09G002890 vs. NCBI nr
Match: gi|645227160|ref|XP_008220381.1| (PREDICTED: uncharacterized protein LOC103320478 [Prunus mume])

HSP 1 Score: 115.9 bits (289), Expect = 6.8e-23
Identity = 78/155 (50.32%), Postives = 100/155 (64.52%), Query Frame = 1 

Query: 11  SGGESGWTMYLDQSYTSDHRF--GGGVDGVKEAKARAEEADEEDLSMVSDASSGPPHYLE 70
           SG ESGWT YLDQSY S  +F   GG+   + AK   EE +EEDLSMVSDASSGPPHY +
Sbjct: 10  SGCESGWTHYLDQSYFSQSQFQRAGGIADYEGAKTEVEEEEEEDLSMVSDASSGPPHYHD 69

Query: 71  DNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTASSPVYGYG 130
            +E+  Y NG S   +S S      SK  KK  KK K++GR Q   +LDDTASSPV  Y 
Sbjct: 70  LDEDCLYENGCS---FSVSWG----SKLGKKSKKKGKESGREQ---HLDDTASSPVLNYS 129

Query: 131 KASKIKAATSNKASEENPVDFSQGFSATHFKVNSS 164
           K  K++  + +++S +N + +S+GFSATH K  S+
Sbjct: 130 K-KKLRPLSKDESSMQNVLGYSEGFSATHMKGKSA 153

[Close]
BLAST of CmoCh09G002890 vs. NCBI nr
Match: gi|596298669|ref|XP_007227531.1| (hypothetical protein PRUPE_ppa012205mg [Prunus persica])

HSP 1 Score: 115.5 bits (288), Expect = 8.9e-23
Identity = 78/155 (50.32%), Postives = 99/155 (63.87%), Query Frame = 1 

Query: 11  SGGESGWTMYLDQSYTSDHRF--GGGVDGVKEAKARAEEADEEDLSMVSDASSGPPHYLE 70
           SG ESGWT YLDQSY S  +F   GG+   + AK   EE +EEDLSMVSDASSGPPHY +
Sbjct: 10  SGCESGWTHYLDQSYFSQSQFQRAGGIADYEGAKTEVEEEEEEDLSMVSDASSGPPHYHD 69

Query: 71  DNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTASSPVYGYG 130
            +E+  Y NG S   +S S      SK  KK  KK K++GR Q   +LDDTASSPV  Y 
Sbjct: 70  LDEDCLYENGCS---FSVSWG----SKLGKKSKKKGKESGREQ---HLDDTASSPVLNYS 129

Query: 131 KASKIKAATSNKASEENPVDFSQGFSATHFKVNSS 164
           K  K+   + +++S +N + +S+GFSATH K  S+
Sbjct: 130 K-KKLSTLSKDESSMQNVLGYSEGFSATHMKGKSA 153

[Close]
BLAST of CmoCh09G002890 vs. NCBI nr
Match: gi|920698990|gb|KOM42215.1| (hypothetical protein LR48_Vigan04g241300 [Vigna angularis])

HSP 1 Score: 113.6 bits (283), Expect = 3.4e-22
Identity = 80/163 (49.08%), Postives = 96/163 (58.90%), Query Frame = 1 

Query: 3   DWSATHYCSGGESGWTMYLDQSYTSDHRFG--GGVDGVKEAKARAEEADEEDLSMVSDAS 62
           D S++ Y S  ESGWT YLDQS  S+  F   GG+   +   A  EE +EEDLSM+SDAS
Sbjct: 2   DISSSQYNSADESGWTHYLDQSSLSESYFQRRGGIVHYEGKGATMEEEEEEDLSMISDAS 61

Query: 63  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 122
           SGPPHY ED+++    N YSS ++   +S       EKKK  K K+ G NQ PS LDDTA
Sbjct: 62  SGPPHYHEDDDQHNCVNWYSSSSHHTKES-------EKKKKNKVKEYGNNQHPSTLDDTA 121

Query: 123 SSPVYGYGKAS---KIKAATSNKASEENPVDFSQGFSATHFKV 161
           SSPV    KAS     KA+ S   + EN VDF   FS T  KV
Sbjct: 122 SSPVLNCAKASHKENKKASFSGNGAVENAVDFPPCFSGTKVKV 157

The following BLAST results are available for this feature:
BLAST of CmoCh09G002890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh09G002890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZY5_CUCSA1.1e-5673.84Uncharacterized protein OS=Cucumis sativus GN=Csa_4G643100 PE=4 SV=1[more]
M5Y9G7_PRUPE6.2e-2350.32Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012205mg PE=4 SV=1[more]
A0A0L9UH32_PHAAN2.4e-2249.08Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g241300 PE=4 SV=1[more]
B9R6Y6_RICCO2.4e-2251.95Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1587010 PE=4 SV=1[more]
A5C0N4_VITVI6.9e-2248.78Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024777 PE=4 SV=1[more]
BLAST of CmoCh09G002890 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33800.14.4e-1235.98 unknown protein[more]
AT1G58460.13.6e-0632.93 unknown protein[more]
BLAST of CmoCh09G002890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659103619|ref|XP_008452653.1|7.0e-6077.06PREDICTED: uncharacterized protein LOC103493609 [Cucumis melo][more]
gi|778696455|ref|XP_011654154.1|1.6e-5673.84PREDICTED: uncharacterized protein LOC105435311 [Cucumis sativus][more]
gi|645227160|ref|XP_008220381.1|6.8e-2350.32PREDICTED: uncharacterized protein LOC103320478 [Prunus mume][more]
gi|596298669|ref|XP_007227531.1|8.9e-2350.32hypothetical protein PRUPE_ppa012205mg [Prunus persica][more]
gi|920698990|gb|KOM42215.1|3.4e-2249.08hypothetical protein LR48_Vigan04g241300 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G002890.1CmoCh09G002890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33347FAMILY NOT NAMEDcoord: 10..163
score: 4.5
NoneNo IPR availablePANTHERPTHR33347:SF5SUBFAMILY NOT NAMEDcoord: 10..163
score: 4.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh09G002890Cucsa.352890Cucumber (Gy14) v1cgycmoB0961
CmoCh09G002890Cucsa.395530Cucumber (Gy14) v1cgycmoB1083
CmoCh09G002890CmaCh09G002970Cucurbita maxima (Rimu)cmacmoB027
CmoCh09G002890CmaCh01G017790Cucurbita maxima (Rimu)cmacmoB435
CmoCh09G002890Cla020595Watermelon (97103) v1cmowmB018
CmoCh09G002890Csa2G354620Cucumber (Chinese Long) v2cmocuB002
CmoCh09G002890Csa4G643100Cucumber (Chinese Long) v2cmocuB011
CmoCh09G002890MELO3C016826Melon (DHL92) v3.5.1cmomeB029
CmoCh09G002890ClCG05G020680Watermelon (Charleston Gray)cmowcgB015
CmoCh09G002890CSPI04G24860Wild cucumber (PI 183967)cmocpiB011
CmoCh09G002890CSPI02G18430Wild cucumber (PI 183967)cmocpiB002
CmoCh09G002890Lsi04G014760Bottle gourd (USVL1VR-Ls)cmolsiB012
CmoCh09G002890Cp4.1LG02g06410Cucurbita pepo (Zucchini)cmocpeB020
CmoCh09G002890Cp4.1LG06g02120Cucurbita pepo (Zucchini)cmocpeB034
CmoCh09G002890MELO3C016826.2Melon (DHL92) v3.6.1cmomedB029
CmoCh09G002890CsaV3_4G035130Cucumber (Chinese Long) v3cmocucB0015
CmoCh09G002890CsaV3_2G026020Cucumber (Chinese Long) v3cmocucB0004
CmoCh09G002890Cla97C05G102400Watermelon (97103) v2cmowmbB014
CmoCh09G002890Bhi09G002652Wax gourdcmowgoB0029
CmoCh09G002890CsGy4G023170Cucumber (Gy14) v2cgybcmoB433
CmoCh09G002890Carg10650Silver-seed gourdcarcmoB1040
CmoCh09G002890Carg21771Silver-seed gourdcarcmoB0439
CmoCh09G002890Carg11892Silver-seed gourdcarcmoB0255
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh09G002890CmoCh16G003290Cucurbita moschata (Rifu)cmocmoB010
CmoCh09G002890CmoCh01G018370Cucurbita moschata (Rifu)cmocmoB017
CmoCh09G002890CmoCh05G001350Cucurbita moschata (Rifu)cmocmoB033
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh09G002890Cucumber (Gy14) v2cgybcmoB138
CmoCh09G002890Cucumber (Gy14) v2cgybcmoB682
CmoCh09G002890Melon (DHL92) v3.6.1cmomedB012
CmoCh09G002890Melon (DHL92) v3.6.1cmomedB036
CmoCh09G002890Silver-seed gourdcarcmoB0001
CmoCh09G002890Silver-seed gourdcarcmoB0542
CmoCh09G002890Silver-seed gourdcarcmoB0611
CmoCh09G002890Cucumber (Chinese Long) v3cmocucB0026
CmoCh09G002890Watermelon (97103) v2cmowmbB001
CmoCh09G002890Watermelon (97103) v2cmowmbB023
CmoCh09G002890Wax gourdcmowgoB0005
CmoCh09G002890Wax gourdcmowgoB0015
CmoCh09G002890Cucurbita moschata (Rifu)cmocmoB004
CmoCh09G002890Cucurbita moschata (Rifu)cmocmoB028
CmoCh09G002890Cucurbita moschata (Rifu)cmocmoB037
CmoCh09G002890Cucumber (Gy14) v1cgycmoB0214
CmoCh09G002890Cucurbita maxima (Rimu)cmacmoB164
CmoCh09G002890Cucurbita maxima (Rimu)cmacmoB632
CmoCh09G002890Cucurbita maxima (Rimu)cmacmoB755
CmoCh09G002890Cucurbita maxima (Rimu)cmacmoB841
CmoCh09G002890Wild cucumber (PI 183967)cmocpiB024
CmoCh09G002890Cucumber (Chinese Long) v2cmocuB024
CmoCh09G002890Melon (DHL92) v3.5.1cmomeB012
CmoCh09G002890Melon (DHL92) v3.5.1cmomeB037
CmoCh09G002890Watermelon (Charleston Gray)cmowcgB013
CmoCh09G002890Watermelon (Charleston Gray)cmowcgB023
CmoCh09G002890Watermelon (97103) v1cmowmB007
CmoCh09G002890Watermelon (97103) v1cmowmB026
CmoCh09G002890Cucurbita pepo (Zucchini)cmocpeB006
CmoCh09G002890Cucurbita pepo (Zucchini)cmocpeB017
CmoCh09G002890Cucurbita pepo (Zucchini)cmocpeB038
CmoCh09G002890Bottle gourd (USVL1VR-Ls)cmolsiB004
CmoCh09G002890Bottle gourd (USVL1VR-Ls)cmolsiB020