CmoCh09G002710 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAATTCTCAAATTAAAAAAAAAAAAAATCTAAAATATAAGTGGGCCACAAGTCTTAGGTATACACTTAAACCCAAATCGATCCATCCTAATATCTCCTCCAGCTCGAGGTAATTGTGTTTTCTTTTTTTCTTTGCTAAAAATTTTCGCTCCCCTTGTTCAATTCGTTCTCGATTCCACTCGTTACAAGCTTCTCCGTTTGTGGCGCCTCAGCTGCGAGCAATGGTACTCACCAACTTCAATGGAGCTGGCGTCGGATTCGGTATGATATCTTCATAAATATTGAGCTTGTTTTGTTTGATATATTTTGTATATTCTTATCTTTTCTTTGTTTTTTTTAACTGATTATTGCTGTTATTTTCTTGATTGGAGGTTTTGGTATCGGTTGTGGATTCGGCATCGGATGGGGTTTCGGAGGTATGTGATGTCTTACCCTAGTTATTTTCGATCGTTTTTCTCTCTTGCTTAGTTCTTTCATTTACCTGTTGTACGTCGTGAGCTTGTTCCGGAATTTCTAAGATGATTTCGGGCTTTTTGTTTATTTGCGTTCTCTCTAATTATGTTGGATTTAATATGCTAGCTGGGCGAAGTTAGCTGAAAAGAGTTTCTGGAATATTATGAAATGAATGCTACAGAACCCTGAGGCTTTTGAATTATAAATTGAAAAAGATTTGGATCAGAAAGGGGGATAAATTGAAAAACTATTATTCTTCAATTGGGATCAGAAAGGGGGATAATATGTAGTTTTTTTTCCTCTGAAAATGATACGAGTTGTTCTTGTTAAGCTACGGTTGGTGTCTTGGCGATGTCTGGCTCTCTATTATTTTGAAATGACTGGCAGGCCGAGGTATGCCAATTTTAATAGGTTATTTACTTGGAATAAGTAGAGCCTTTTCTTTTGGCAAGTTTGGTGAAGATGGAGTAACTTTGTGATTTGTAGAGGCAGAACAATGAGATGAATTGGTTTGTGGTGATCTATTGACATCGTTGATCTTAAGATATCTACATCTAGCCACAGATACCACTTGGAATTCCTGTGTGACTCCCAACAGCGAGTAGTTCATGTATTTGTTTGTGAAATCTATTAGTTTCATTACTCTAAAAGAAATATGCATGTTGGGCAATATTCTAGTTCAATGAGAGCTCACAACAGAAGTTGTGGGGTATCTTGTTTTAACTTGTGACGGACTAATAGTTTTGGGTTCTTCCCATGACCTGTATTAACTACTAGTTCAATCCATGATGGTTCATCTTATGAGTTATTTAAAGGACTCAAACCATCCTTCCACAGGTTAATTGAAAGGGTGTAAGCTGGATACCTATAGACAAGAATCTTGACGGGCTAGAAACTAAGTTCTGTGCCTTTGTTGCAACTCTCGTTTTTGCAGTTTAGGATATTAGAACAGTCTGGAATCTTAGGTTGGTATGGATTTAGTTTAAGGAACGATAGATAAAGTAAATTGCAATGGAAGATTACGTTTTCACGTTTAGACTATCAGATTTCTGTTTGGAGTCGTTCAAAAGTTATGATTTCTGCTTAGTGTACTGGGGTTTAATTTCTGCATAGGAACCTTGAAAGTTATGGTCCTGCACATAACTTTTAGATCCAGTTGTAGATTCCATTATTTCCCTTCAAAATTTCCAGGCACGTATTATTCTTTAACGTGGGAGTTGTAGGTTTTCTGCAATTACGTGCCCCACCTGAATGAAGATGTTTATTTTGCAGGAATGCCTTTGAACTTCTTGGGCCTTGGTGCGGGTAACAAACGAACATGCTCTACGTACAAATATTTTTCCAAATAGACATTCATCTGATTGCGTAGTTATTTATTTTGTGATTCTTTTCTGTAGGTGGTGGGTGTGGTGTTGGATTGGGACTTGGATGGGGATTTGGCACAGCTTACGGGAGTAAGTATCGGTCCTCAAGGATGATATTTCAGGGAATGGAACTTGACAACAAGGATCAAAATCAAAGTTATGACAGCAAGGACTCAAAAGACTTGTCCAGAAATTCCAGAAAAGCTTGAGTCTAGTCTCTCCCTTATTATTGGCTAGTTTAAGCCTTCAGCATTATAAGAGTTTCTTTAAATCTTTTGAGCTCTTTTTGGATGGAATTGAGGTAACATCTGATTGTATAATTGTACCTACATTTGATTGTATAAAAATGACTTTTCTTTTGTCGCCTAACTTTCCAACATATTAGTCAAGTTTATAAGACTTCACAAGGGCCTCTTAACCGTAGGTAGGTCAACCACGATCTTTGCTCCAATGTTCATGCGGATAGCGCTTACAACCAGAACCACCTTGCACATATCATGGTTTCAAAAGCTTGATGTGATCCTTGGGGGTTTTTCATGTTCATTCTATTGCTTTCTTATATATATGAGGTGTTATTCTTTCTTCCAGGCGTTCTGTTGCATTTAGTTGGCCAATAGACATGACGAGAAACTATTCGGTTTCACGGGGCCTCCTCCTTTTCTGTCTTGTCCTCTCCACTAATGTTCTTGACGCTGCAAATGCAAGAAAATTGCAGCTCGCGAGTAGCATGAGTGCTCATGAAATGGGAAATGGCCTTCCAGAGAACACAAACGTTAAAAAGGAAGTGAACCTTCTAGAGCTCACGGTTGGAGGTTATGGGGGAGTATCACCTGGTGGTGGCTCTGGCATCGGGATGAACGGAGGCTTTGGCTCAGGTTACGGTGGTTCTGGATCCGGTGGGGCTGGAGGTGGTGGATTCGGTTCGGGCATTGGTTATGGGTCGGATGGTGGGTATGGACCTGGAATTGGGTATGGCTCAGATTCAGGCTTTGGTGGTGGCGGTGGTGGGTTAGGCGGCTCAGGTGGCATCGGAGGTGGTGGAATAGGCGGCTCAGGTGGCATTGGAGGTAGTGGTGGCGGTGGTGGATTAGGCGGTTCAGGGGGCATTGGAGGTGGTGGAATAGGCGGTTCAGGTGGCATTGGAGGTGGAGTAGGCGGTGGTGGCGGTGGTGGATTAGGCGGTTCAGGTGGCATTGGAGGTGGTGGAATAGGCGGTGGTGGGTTAGGCGGCTCAGGTGGCATTGGAGGTGGCGGTGGAGTAAGTGGTTCAGGAGGCGGTGGCGGCGGAGTTGGCGGTTCAGGAGGCACGGGTGGTGGTAGTGGTGGCGGTGGTGGTTATGGAGGCAACATGAATAATCCTTGA AAAATTCTCAAATTAAAAAAAAAAAAAATCTAAAATATAAGTGGGCCACAAGTCTTAGGTATACACTTAAACCCAAATCGATCCATCCTAATATCTCCTCCAGCTCGAGGTAATTGTGTTTTCTTTTTTTCTTTGCTAAAAATTTTCGCTCCCCTTGTTCAATTCGTTCTCGATTCCACTCGTTACAAGCTTCTCCGTTTGTGGCGCCTCAGCTGCGAGCAATGGTACTCACCAACTTCAATGGAGCTGGCGTCGGATTCGGTTTTGGTATCGGTTGTGGATTCGGCATCGGATGGGGTTTCGGAGGTTTTCTGCAATTACGTGCCCCACCTGAATGAAGATGTTTATTTTGCAGGAATGCCTTTGAACTTCTTGGGCCTTGGTGCGGGTGGTGGGTGTGGTGTTGGATTGGGACTTGGATGGGGATTTGGCACAGCTTACGGGAGTAAGTATCGGTCCTCAAGGATGATATTTCAGGGAATGGAACTTGACAACAAGGATCAAAATCAAAGTTATGACAGCAAGGACTCAAAAGACTTGCGTTCTGTTGCATTTAGTTGGCCAATAGACATGACGAGAAACTATTCGGTTTCACGGGGCCTCCTCCTTTTCTGTCTTGTCCTCTCCACTAATGTTCTTGACGCTGCAAATGCAAGAAAATTGCAGCTCGCGAGTAGCATGAGTGCTCATGAAATGGGAAATGGCCTTCCAGAGAACACAAACGTTAAAAAGGAAGTGAACCTTCTAGAGCTCACGGTTGGAGGTTATGGGGGAGTATCACCTGGTGGTGGCTCTGGCATCGGGATGAACGGAGGCTTTGGCTCAGGTTACGGTGGTTCTGGATCCGGTGGGGCTGGAGGTGGTGGATTCGGTTCGGGCATTGGTTATGGGTCGGATGGTGGGTATGGACCTGGAATTGGGTATGGCTCAGATTCAGGCTTTGGTGGTGGCGGTGGTGGGTTAGGCGGCTCAGGTGGCATCGGAGGTGGTGGAATAGGCGGCTCAGGTGGCATTGGAGGTAGTGGTGGCGGTGGTGGATTAGGCGGTTCAGGGGGCATTGGAGGTGGTGGAATAGGCGGTTCAGGTGGCATTGGAGGTGGAGTAGGCGGTGGTGGCGGTGGTGGATTAGGCGGTTCAGGTGGCATTGGAGGTGGTGGAATAGGCGGTGGTGGGTTAGGCGGCTCAGGTGGCATTGGAGGTGGCGGTGGAGTAAGTGGTTCAGGAGGCGGTGGCGGCGGAGTTGGCGGTTCAGGAGGCACGGGTGGTGGTAGTGGTGGCGGTGGTGGTTATGGAGGCAACATGAATAATCCTTGA ATGGAGCTGGCGTCGGATTCGGTTTTGGTATCGGTTGTGGATTCGGCATCGGATGGGGTTTCGGAGGTTTTCTGCAATTACGTGCCCCACCTGAATGAAGATGTTTATTTTGCAGGAATGCCTTTGAACTTCTTGGGCCTTGGTGCGGGTGGTGGGTGTGGTGTTGGATTGGGACTTGGATGGGGATTTGGCACAGCTTACGGGAGTAAGTATCGGTCCTCAAGGATGATATTTCAGGGAATGGAACTTGACAACAAGGATCAAAATCAAAGTTATGACAGCAAGGACTCAAAAGACTTGCGTTCTGTTGCATTTAGTTGGCCAATAGACATGACGAGAAACTATTCGGTTTCACGGGGCCTCCTCCTTTTCTGTCTTGTCCTCTCCACTAATGTTCTTGACGCTGCAAATGCAAGAAAATTGCAGCTCGCGAGTAGCATGAGTGCTCATGAAATGGGAAATGGCCTTCCAGAGAACACAAACGTTAAAAAGGAAGTGAACCTTCTAGAGCTCACGGTTGGAGGTTATGGGGGAGTATCACCTGGTGGTGGCTCTGGCATCGGGATGAACGGAGGCTTTGGCTCAGGTTACGGTGGTTCTGGATCCGGTGGGGCTGGAGGTGGTGGATTCGGTTCGGGCATTGGTTATGGGTCGGATGGTGGGTATGGACCTGGAATTGGGTATGGCTCAGATTCAGGCTTTGGTGGTGGCGGTGGTGGGTTAGGCGGCTCAGGTGGCATCGGAGGTGGTGGAATAGGCGGCTCAGGTGGCATTGGAGGTAGTGGTGGCGGTGGTGGATTAGGCGGTTCAGGGGGCATTGGAGGTGGTGGAATAGGCGGTTCAGGTGGCATTGGAGGTGGAGTAGGCGGTGGTGGCGGTGGTGGATTAGGCGGTTCAGGTGGCATTGGAGGTGGTGGAATAGGCGGTGGTGGGTTAGGCGGCTCAGGTGGCATTGGAGGTGGCGGTGGAGTAAGTGGTTCAGGAGGCGGTGGCGGCGGAGTTGGCGGTTCAGGAGGCACGGGTGGTGGTAGTGGTGGCGGTGGTGGTTATGGAGGCAACATGAATAATCCTTGA
BLAST of CmoCh09G002710 vs. TrEMBL
Match: A0A0A0L0F8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G642340 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 4.7e-25 Identity = 60/64 (93.75%), Postives = 61/64 (95.31%), Query Frame = 1
BLAST of CmoCh09G002710 vs. TrEMBL
Match: A0A0A0L2J1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G642350 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 3.4e-23 Identity = 167/248 (67.34%), Postives = 180/248 (72.58%), Query Frame = 1
BLAST of CmoCh09G002710 vs. TAIR10
Match: AT1G27695.1 (AT1G27695.1 glycine-rich protein) HSP 1 Score: 86.7 bits (213), Expect = 3.3e-17 Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 1
BLAST of CmoCh09G002710 vs. NCBI nr
Match: gi|449447049|ref|XP_004141282.1| (PREDICTED: keratin-associated protein 6-2 isoform X2 [Cucumis sativus]) HSP 1 Score: 123.6 bits (309), Expect = 6.8e-25 Identity = 60/64 (93.75%), Postives = 61/64 (95.31%), Query Frame = 1
BLAST of CmoCh09G002710 vs. NCBI nr
Match: gi|659103485|ref|XP_008452623.1| (PREDICTED: keratin-associated protein 6-2 isoform X1 [Cucumis melo]) HSP 1 Score: 119.8 bits (299), Expect = 9.8e-24 Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 1
BLAST of CmoCh09G002710 vs. NCBI nr
Match: gi|778696358|ref|XP_011654145.1| (PREDICTED: acanthoscurrin-2 isoform X1 [Cucumis sativus]) HSP 1 Score: 117.5 bits (293), Expect = 4.9e-23 Identity = 167/248 (67.34%), Postives = 180/248 (72.58%), Query Frame = 1
BLAST of CmoCh09G002710 vs. NCBI nr
Match: gi|659103489|ref|XP_008452625.1| (PREDICTED: uncharacterized protein LOC103493589 isoform X2 [Cucumis melo]) HSP 1 Score: 117.1 bits (292), Expect = 6.4e-23 Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |