CmoCh09G002600 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G002600
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRAN GTPase-activating protein 2
LocationCmo_Chr09 : 1158341 .. 1158796 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGAGACCGAGATCGCCACCGTGCCGACCACCGAACAGGATTCCCCAGGAGATCAGGCTAAGGAGTCACCCAAATCATCCAAGTCTTTTAGCACCTCCTTTAGTATTTGGCCGCCTTCGCAGCGCACTCGTGACGCTGTCATCAAACGCCTCATCGAGACGCTCTCCAACCCCTCTGTTCTCTCCAAGCGCTATGGCACTGTACCCCATGAAGAGGCCACCGATGCAGCGCGTCTTATAGAGGAGGAAGCTTATTCTTTCGCCGCTGCTAAAGCCAGCGCCGACGACGACGGGATCGAGATCCTTCAGCTTTATTCTAGGGAGATCAGCAAGCGCACTCTCGATACTGTCAAGGCTAGAGCTGCGTCCGATTCTACAGCTGAAAACGGGTCGTCTGCTCCTGTTGTATCGACCACCGACAAGGAGGAAACCCCATCTGTTCAAGAACCCTGA

mRNA sequence

ATGTCTGAGACCGAGATCGCCACCGTGCCGACCACCGAACAGGATTCCCCAGGAGATCAGGCTAAGGAGTCACCCAAATCATCCAAGTCTTTTAGCACCTCCTTTAGTATTTGGCCGCCTTCGCAGCGCACTCGTGACGCTGTCATCAAACGCCTCATCGAGACGCTCTCCAACCCCTCTGTTCTCTCCAAGCGCTATGGCACTGTACCCCATGAAGAGGCCACCGATGCAGCGCGTCTTATAGAGGAGGAAGCTTATTCTTTCGCCGCTGCTAAAGCCAGCGCCGACGACGACGGGATCGAGATCCTTCAGCTTTATTCTAGGGAGATCAGCAAGCGCACTCTCGATACTGTCAAGGCTAGAGCTGCGTCCGATTCTACAGCTGAAAACGGGTCGTCTGCTCCTGTTGTATCGACCACCGACAAGGAGGAAACCCCATCTGTTCAAGAACCCTGA

Coding sequence (CDS)

ATGTCTGAGACCGAGATCGCCACCGTGCCGACCACCGAACAGGATTCCCCAGGAGATCAGGCTAAGGAGTCACCCAAATCATCCAAGTCTTTTAGCACCTCCTTTAGTATTTGGCCGCCTTCGCAGCGCACTCGTGACGCTGTCATCAAACGCCTCATCGAGACGCTCTCCAACCCCTCTGTTCTCTCCAAGCGCTATGGCACTGTACCCCATGAAGAGGCCACCGATGCAGCGCGTCTTATAGAGGAGGAAGCTTATTCTTTCGCCGCTGCTAAAGCCAGCGCCGACGACGACGGGATCGAGATCCTTCAGCTTTATTCTAGGGAGATCAGCAAGCGCACTCTCGATACTGTCAAGGCTAGAGCTGCGTCCGATTCTACAGCTGAAAACGGGTCGTCTGCTCCTGTTGTATCGACCACCGACAAGGAGGAAACCCCATCTGTTCAAGAACCCTGA
Homology
[Close]
BLAST of CmoCh09G002600 vs. Swiss-Prot
Match: MAF1_SOLLC (MFP1 attachment factor 1 OS=Solanum lycopersicum GN=MAF1 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-30
Identity = 74/120 (61.67%), Postives = 92/120 (76.67%), Query Frame = 1 

Query: 28  SKSFSTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYS 87
           +K  +TSFSIWPP+QRTRDAVI RLIE+LS PS+LSKRYGT+P +EA++ ARLIEEEA++
Sbjct: 19  NKPMTTSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETARLIEEEAFA 78

Query: 88  FAAAKASADDDGIEILQLYSREISKRTLDTVKARAASDSTAENGSSAPVVSTTDKEETPS 147
            A + AS  DDGIEILQ+YS+EISKR +DTVK+R+A  + A  G S P     D  E  S
Sbjct: 79  AAGSTASDADDGIEILQVYSKEISKRMIDTVKSRSA-PAAASEGESKPSELPADASEPSS 137

[Close]
BLAST of CmoCh09G002600 vs. Swiss-Prot
Match: WPP2_ARATH (WPP domain-containing protein 2 OS=Arabidopsis thaliana GN=WPP2 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.4e-26
Identity = 69/127 (54.33%), Postives = 92/127 (72.44%), Query Frame = 1 

Query: 8   TVPTTEQDSPGDQ--AKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKR 67
           T PT+++ +  D    KE+    K    S  IWPP+Q+TRDAV+ RLIETLS  S+LSKR
Sbjct: 29  TDPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKR 88

Query: 68  YGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTVKARAASD 127
           YGT+  ++AT  A+LIEEEAY  A+   S+DDDGI+IL+LYS+EISKR L++VKAR  S+
Sbjct: 89  YGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVKAR--SN 148

Query: 128 STAENGS 133
           ++  NGS
Sbjct: 149 ASVGNGS 153

[Close]
BLAST of CmoCh09G002600 vs. Swiss-Prot
Match: WPP1_ARATH (WPP domain-containing protein 1 OS=Arabidopsis thaliana GN=WPP1 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.7e-23
Identity = 71/148 (47.97%), Postives = 96/148 (64.86%), Query Frame = 1 

Query: 1   MSETEIAT-VPTTEQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSNP 60
           +SETE +T +PTTE +          K+    + S  IWPP+Q+TRDAVI RLIETLS  
Sbjct: 17  ISETENSTTLPTTETE----------KNPNPVTISLRIWPPTQKTRDAVINRLIETLSTE 76

Query: 61  SVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTVK 120
           S+LSKR+G++  EEA+  A+ IE+EAY+ A+A    DDDGIEIL+ YS+EISKR L++VK
Sbjct: 77  SILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVK 136

Query: 121 AR---AASDSTAENGSSAPVVSTTDKEE 145
           A+   A+      +G  + V S  D  E
Sbjct: 137 AKSNVASPPPKDGDGIESAVDSKIDSSE 154

[Close]
BLAST of CmoCh09G002600 vs. Swiss-Prot
Match: WPP3_ARATH (WPP domain-containing protein 3 OS=Arabidopsis thaliana GN=WPP3 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.0e-14
Identity = 46/116 (39.66%), Postives = 71/116 (61.21%), Query Frame = 1 

Query: 14  QDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEE 73
           Q    D   E  K  KS    FS+WPP Q++RD V+  +I+TLS  S+LS +YGT+  EE
Sbjct: 30  QKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEE 89

Query: 74  ATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTVKARAASDSTAE 130
           A+  A+ IEE+AY  A+   S+  DGI+ L++Y  E S+R +++ + R  ++ + E
Sbjct: 90  ASAVAKSIEEKAYDIASRFVSS--DGIKNLEVYGIETSERMIESAEVRFKANGSME 143

[Close]
BLAST of CmoCh09G002600 vs. Swiss-Prot
Match: RAGP1_ARATH (RAN GTPase-activating protein 1 OS=Arabidopsis thaliana GN=RANGAP1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 35/108 (32.41%), Postives = 63/108 (58.33%), Query Frame = 1 

Query: 24  SPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEEATDAARLIEE 83
           S K++++   S  +WPPS+ TR  +++R+ + ++ PS+ S++YG +  EEA   A+ IE+
Sbjct: 4   SAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIED 63

Query: 84  EAYSFAAA--KASADDDGIEILQLYSREISKRTLDTVKARAASDSTAE 130
            A++ A    +   D DG   + +Y++E SK  LD +K     +S  E
Sbjct: 64  LAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGPQEESEVE 111

[Close]
BLAST of CmoCh09G002600 vs. TrEMBL
Match: A0A0A0L505_CUCSA (MFP1 attachment factor 1 OS=Cucumis sativus GN=Csa_4G641730 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 9.9e-57
Identity = 130/158 (82.28%), Postives = 136/158 (86.08%), Query Frame = 1 

Query: 1   MSETEIATVPTTEQDSP--------GDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRL 60
           MS+ +IA    TE DSP        GDQAKES KS KSF+TSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVP EEA +AARLIEEEAYSFAA KASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLDTVKARAASDSTAENGSSAPVVSTTDKEETPSVQE 151
           RTL+TVKARAASDSTAENGSS PVVSTT  EETPSV+E
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEE 158

[Close]
BLAST of CmoCh09G002600 vs. TrEMBL
Match: B9R748_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1588580 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.2e-31
Identity = 84/146 (57.53%), Postives = 98/146 (67.12%), Query Frame = 1 

Query: 8   TVPTTEQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYG 67
           TVPT     P  Q +E PK   +   S SIWPP+QRTRDAVI RLIETLS+PSVLSKRYG
Sbjct: 22  TVPTESHPQPQQQQQEPPKKLSTSGISLSIWPPTQRTRDAVITRLIETLSSPSVLSKRYG 81

Query: 68  TVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTVKARAASDST 127
           T+ H+EA  AAR IE+EA+  A    SA+DDG+EILQLYS+EIS+R LDTVKAR+  DS 
Sbjct: 82  TISHDEAESAARRIEDEAFGVANTATSAEDDGLEILQLYSKEISRRMLDTVKARSRLDSA 141

Query: 128 AENGSS------APVVSTTDKEETPS 148
             NG S      A   +    EE PS
Sbjct: 142 VSNGVSETTTPDAASQTEVSGEEVPS 167

[Close]
BLAST of CmoCh09G002600 vs. TrEMBL
Match: W9S572_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006808 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30
Identity = 83/142 (58.45%), Postives = 101/142 (71.13%), Query Frame = 1 

Query: 1   MSETEIATVPTTEQDSPGDQAKE---------SPKSSKSFSTSFSIWPPSQRTRDAVIKR 60
           MSE E AT+      S  D A E         S  ++K    SFSIWPP+QRTRDAV+ R
Sbjct: 1   MSEQESATITPPASQSEQDSAMEAQSKDNHHDSVTNNKPSQLSFSIWPPAQRTRDAVVNR 60

Query: 61  LIETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREIS 120
           LIETLS PSVLS RYGT+P +EA+ AARLIEEEA++ AA+ A++DDDGI+ILQ+YS+EIS
Sbjct: 61  LIETLSTPSVLSNRYGTLPQDEASAAARLIEEEAFASAASSAASDDDGIQILQVYSKEIS 120

Query: 121 KRTLDTVKARAASDSTAENGSS 134
           KR LD VKAR AS S   +G+S
Sbjct: 121 KRMLDAVKARNASASAVSDGAS 142

[Close]
BLAST of CmoCh09G002600 vs. TrEMBL
Match: A0A067LAZ8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16077 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-29
Identity = 83/151 (54.97%), Postives = 103/151 (68.21%), Query Frame = 1 

Query: 2   SETEIATVPTTEQDSPGDQAK---ESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSN 61
           + T     P+ E+DS   +++   + PK   +   S SIWPP+QRTRDAVI RLIETLS 
Sbjct: 6   NSTTTTVPPSQEKDSAPVESQPQQQEPKKLSNSGISLSIWPPTQRTRDAVITRLIETLST 65

Query: 62  PSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTV 121
           PSVLSKRYG +PH+EA  AAR IEEEA+  A +  SA+DDG+EILQLYS+EISKR LDTV
Sbjct: 66  PSVLSKRYGLIPHDEAEVAARRIEEEAFGVANSATSAEDDGLEILQLYSKEISKRMLDTV 125

Query: 122 KARAASDSTAENGSS-------APVVSTTDK 143
           KAR  SD  A NG S        PV ++T++
Sbjct: 126 KARPRSDPAANNGVSDTPNPDVVPVEASTEE 156

[Close]
BLAST of CmoCh09G002600 vs. TrEMBL
Match: M5XH45_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012555mg PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.7e-29
Identity = 79/158 (50.00%), Postives = 108/158 (68.35%), Query Frame = 1 

Query: 1   MSETEIATVPTTEQDSPGDQAKESPKSSK-------SFSTSFSIWPPSQRTRDAVIKRLI 60
           MS++EI   P        +   + P+ +        S +TSFSIWPP+QRTR+AV+ RLI
Sbjct: 1   MSDSEITVAPNQSSAMDAEPQNQQPEDAPAHKPQKPSHATSFSIWPPTQRTREAVVNRLI 60

Query: 61  ETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKR 120
           ETLS PS LSKRYGT+  +EA+ AARLIE+EA++ A   A++++DGI+ILQ+YS+EISKR
Sbjct: 61  ETLSTPSPLSKRYGTLSADEASAAARLIEDEAFAAAGGSAASEEDGIQILQVYSKEISKR 120

Query: 121 TLDTVKARAASDSTAENGSSAPVVSTTDKEETPSVQEP 152
            LDTVK+R AS S A+NG+S       + E   SV++P
Sbjct: 121 MLDTVKSRTASASAAQNGAS-------ESENPSSVEDP 151

[Close]
BLAST of CmoCh09G002600 vs. TAIR10
Match: AT1G47200.1 (AT1G47200.1 WPP domain protein 2)

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-27
Identity = 69/127 (54.33%), Postives = 92/127 (72.44%), Query Frame = 1 

Query: 8   TVPTTEQDSPGDQ--AKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKR 67
           T PT+++ +  D    KE+    K    S  IWPP+Q+TRDAV+ RLIETLS  S+LSKR
Sbjct: 29  TDPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKR 88

Query: 68  YGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTVKARAASD 127
           YGT+  ++AT  A+LIEEEAY  A+   S+DDDGI+IL+LYS+EISKR L++VKAR  S+
Sbjct: 89  YGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVKAR--SN 148

Query: 128 STAENGS 133
           ++  NGS
Sbjct: 149 ASVGNGS 153

[Close]
BLAST of CmoCh09G002600 vs. TAIR10
Match: AT5G43070.1 (AT5G43070.1 WPP domain protein 1)

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24
Identity = 71/148 (47.97%), Postives = 96/148 (64.86%), Query Frame = 1 

Query: 1   MSETEIAT-VPTTEQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSNP 60
           +SETE +T +PTTE +          K+    + S  IWPP+Q+TRDAVI RLIETLS  
Sbjct: 17  ISETENSTTLPTTETE----------KNPNPVTISLRIWPPTQKTRDAVINRLIETLSTE 76

Query: 61  SVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTVK 120
           S+LSKR+G++  EEA+  A+ IE+EAY+ A+A    DDDGIEIL+ YS+EISKR L++VK
Sbjct: 77  SILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVK 136

Query: 121 AR---AASDSTAENGSSAPVVSTTDKEE 145
           A+   A+      +G  + V S  D  E
Sbjct: 137 AKSNVASPPPKDGDGIESAVDSKIDSSE 154

[Close]
BLAST of CmoCh09G002600 vs. TAIR10
Match: AT5G27940.1 (AT5G27940.1 WPP domain protein 3)

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-15
Identity = 46/116 (39.66%), Postives = 71/116 (61.21%), Query Frame = 1 

Query: 14  QDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEE 73
           Q    D   E  K  KS    FS+WPP Q++RD V+  +I+TLS  S+LS +YGT+  EE
Sbjct: 30  QKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEE 89

Query: 74  ATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTVKARAASDSTAE 130
           A+  A+ IEE+AY  A+   S+  DGI+ L++Y  E S+R +++ + R  ++ + E
Sbjct: 90  ASAVAKSIEEKAYDIASRFVSS--DGIKNLEVYGIETSERMIESAEVRFKANGSME 143

[Close]
BLAST of CmoCh09G002600 vs. TAIR10
Match: AT3G63130.1 (AT3G63130.1 RAN GTPase activating protein 1)

HSP 1 Score: 60.8 bits (146), Expect = 8.1e-10
Identity = 35/108 (32.41%), Postives = 63/108 (58.33%), Query Frame = 1 

Query: 24  SPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEEATDAARLIEE 83
           S K++++   S  +WPPS+ TR  +++R+ + ++ PS+ S++YG +  EEA   A+ IE+
Sbjct: 4   SAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIED 63

Query: 84  EAYSFAAA--KASADDDGIEILQLYSREISKRTLDTVKARAASDSTAE 130
            A++ A    +   D DG   + +Y++E SK  LD +K     +S  E
Sbjct: 64  LAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGPQEESEVE 111

[Close]
BLAST of CmoCh09G002600 vs. TAIR10
Match: AT5G19320.1 (AT5G19320.1 RAN GTPase activating protein 2)

HSP 1 Score: 59.3 bits (142), Expect = 2.4e-09
Identity = 37/114 (32.46%), Postives = 66/114 (57.89%), Query Frame = 1 

Query: 28  SKSFSTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYS 87
           S+  + S  +WPPS  TR A+I+R+    S+ ++ +++YG++  ++AT+ A+ IE+ A+S
Sbjct: 7   SRPHAFSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFS 66

Query: 88  FA--AAKASADDDGIEILQLYSREISKRTLDTVK----ARAASDSTAENGSSAP 136
            A    +   D DG   +QLY++E SK  L+ +K    A+ A+       S +P
Sbjct: 67  TANQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSP 120

[Close]
BLAST of CmoCh09G002600 vs. NCBI nr
Match: gi|449447043|ref|XP_004141279.1| (PREDICTED: MFP1 attachment factor 1-like [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 1.4e-56
Identity = 130/158 (82.28%), Postives = 136/158 (86.08%), Query Frame = 1 

Query: 1   MSETEIATVPTTEQDSP--------GDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRL 60
           MS+ +IA    TE DSP        GDQAKES KS KSF+TSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVP EEA +AARLIEEEAYSFAA KASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLDTVKARAASDSTAENGSSAPVVSTTDKEETPSVQE 151
           RTL+TVKARAASDSTAENGSS PVVSTT  EETPSV+E
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEE 158

[Close]
BLAST of CmoCh09G002600 vs. NCBI nr
Match: gi|659103465|ref|XP_008452611.1| (PREDICTED: MFP1 attachment factor 1-like [Cucumis melo])

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-56
Identity = 128/158 (81.01%), Postives = 136/158 (86.08%), Query Frame = 1 

Query: 1   MSETEIATVPTTEQDSP--------GDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRL 60
           MS+ +IA    TE DSP        GDQAKES KS KSF+TSFSIWPPSQRTRDAV+KRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVVKRL 60

Query: 61  IETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVP EEA +AARLIEEEAYSFAA KASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLDTVKARAASDSTAENGSSAPVVSTTDKEETPSVQE 151
           RTL+TVKARAASDSTAENGSS PVVSTT  EETPSV++
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEQ 158

[Close]
BLAST of CmoCh09G002600 vs. NCBI nr
Match: gi|255538152|ref|XP_002510141.1| (PREDICTED: MFP1 attachment factor 1 [Ricinus communis])

HSP 1 Score: 142.5 bits (358), Expect = 6.0e-31
Identity = 84/146 (57.53%), Postives = 98/146 (67.12%), Query Frame = 1 

Query: 8   TVPTTEQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYG 67
           TVPT     P  Q +E PK   +   S SIWPP+QRTRDAVI RLIETLS+PSVLSKRYG
Sbjct: 22  TVPTESHPQPQQQQQEPPKKLSTSGISLSIWPPTQRTRDAVITRLIETLSSPSVLSKRYG 81

Query: 68  TVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTVKARAASDST 127
           T+ H+EA  AAR IE+EA+  A    SA+DDG+EILQLYS+EIS+R LDTVKAR+  DS 
Sbjct: 82  TISHDEAESAARRIEDEAFGVANTATSAEDDGLEILQLYSKEISRRMLDTVKARSRLDSA 141

Query: 128 AENGSS------APVVSTTDKEETPS 148
             NG S      A   +    EE PS
Sbjct: 142 VSNGVSETTTPDAASQTEVSGEEVPS 167

[Close]
BLAST of CmoCh09G002600 vs. NCBI nr
Match: gi|703118798|ref|XP_010101688.1| (hypothetical protein L484_006808 [Morus notabilis])

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-30
Identity = 83/142 (58.45%), Postives = 101/142 (71.13%), Query Frame = 1 

Query: 1   MSETEIATVPTTEQDSPGDQAKE---------SPKSSKSFSTSFSIWPPSQRTRDAVIKR 60
           MSE E AT+      S  D A E         S  ++K    SFSIWPP+QRTRDAV+ R
Sbjct: 1   MSEQESATITPPASQSEQDSAMEAQSKDNHHDSVTNNKPSQLSFSIWPPAQRTRDAVVNR 60

Query: 61  LIETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREIS 120
           LIETLS PSVLS RYGT+P +EA+ AARLIEEEA++ AA+ A++DDDGI+ILQ+YS+EIS
Sbjct: 61  LIETLSTPSVLSNRYGTLPQDEASAAARLIEEEAFASAASSAASDDDGIQILQVYSKEIS 120

Query: 121 KRTLDTVKARAASDSTAENGSS 134
           KR LD VKAR AS S   +G+S
Sbjct: 121 KRMLDAVKARNASASAVSDGAS 142

[Close]
BLAST of CmoCh09G002600 vs. NCBI nr
Match: gi|802571049|ref|XP_012068275.1| (PREDICTED: MFP1 attachment factor 1-like [Jatropha curcas])

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 83/151 (54.97%), Postives = 103/151 (68.21%), Query Frame = 1 

Query: 2   SETEIATVPTTEQDSPGDQAK---ESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIETLSN 61
           + T     P+ E+DS   +++   + PK   +   S SIWPP+QRTRDAVI RLIETLS 
Sbjct: 6   NSTTTTVPPSQEKDSAPVESQPQQQEPKKLSNSGISLSIWPPTQRTRDAVITRLIETLST 65

Query: 62  PSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTLDTV 121
           PSVLSKRYG +PH+EA  AAR IEEEA+  A +  SA+DDG+EILQLYS+EISKR LDTV
Sbjct: 66  PSVLSKRYGLIPHDEAEVAARRIEEEAFGVANSATSAEDDGLEILQLYSKEISKRMLDTV 125

Query: 122 KARAASDSTAENGSS-------APVVSTTDK 143
           KAR  SD  A NG S        PV ++T++
Sbjct: 126 KARPRSDPAANNGVSDTPNPDVVPVEASTEE 156

The following BLAST results are available for this feature:
BLAST of CmoCh09G002600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MAF1_SOLLC1.3e-3061.67MFP1 attachment factor 1 OS=Solanum lycopersicum GN=MAF1 PE=1 SV=1[more]
WPP2_ARATH3.4e-2654.33WPP domain-containing protein 2 OS=Arabidopsis thaliana GN=WPP2 PE=1 SV=1[more]
WPP1_ARATH2.7e-2347.97WPP domain-containing protein 1 OS=Arabidopsis thaliana GN=WPP1 PE=1 SV=1[more]
WPP3_ARATH3.0e-1439.66WPP domain-containing protein 3 OS=Arabidopsis thaliana GN=WPP3 PE=2 SV=1[more]
RAGP1_ARATH1.4e-0832.41RAN GTPase-activating protein 1 OS=Arabidopsis thaliana GN=RANGAP1 PE=1 SV=1[more]
BLAST of CmoCh09G002600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L505_CUCSA9.9e-5782.28MFP1 attachment factor 1 OS=Cucumis sativus GN=Csa_4G641730 PE=4 SV=1[more]
B9R748_RICCO4.2e-3157.53Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1588580 PE=4 SV=1[more]
W9S572_9ROSA1.2e-3058.45Uncharacterized protein OS=Morus notabilis GN=L484_006808 PE=4 SV=1[more]
A0A067LAZ8_JATCU1.0e-2954.97Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16077 PE=4 SV=1[more]
M5XH45_PRUPE6.7e-2950.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012555mg PE=4 SV=1[more]
BLAST of CmoCh09G002600 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G47200.11.9e-2754.33 WPP domain protein 2[more]
AT5G43070.11.5e-2447.97 WPP domain protein 1[more]
AT5G27940.11.7e-1539.66 WPP domain protein 3[more]
AT3G63130.18.1e-1032.41 RAN GTPase activating protein 1[more]
AT5G19320.12.4e-0932.46 RAN GTPase activating protein 2[more]
BLAST of CmoCh09G002600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447043|ref|XP_004141279.1|1.4e-5682.28PREDICTED: MFP1 attachment factor 1-like [Cucumis sativus][more]
gi|659103465|ref|XP_008452611.1|4.1e-5681.01PREDICTED: MFP1 attachment factor 1-like [Cucumis melo][more]
gi|255538152|ref|XP_002510141.1|6.0e-3157.53PREDICTED: MFP1 attachment factor 1 [Ricinus communis][more]
gi|703118798|ref|XP_010101688.1|1.7e-3058.45hypothetical protein L484_006808 [Morus notabilis][more]
gi|802571049|ref|XP_012068275.1|1.5e-2954.97PREDICTED: MFP1 attachment factor 1-like [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025265WPP_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005635 nuclear envelope
cellular_component GO:0016363 nuclear matrix
cellular_component GO:0005737 cytoplasm
cellular_component GO:0012505 endomembrane system
cellular_component GO:0044428 nuclear part
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G002600.1CmoCh09G002600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025265WPP domainPFAMPF13943WPPcoord: 34..126
score: 2.0
NoneNo IPR availablePANTHERPTHR34362FAMILY NOT NAMEDcoord: 4..130
score: 2.3
NoneNo IPR availablePANTHERPTHR34362:SF1WPP DOMAIN-CONTAINING PROTEIN 1-RELATEDcoord: 4..130
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh09G002600CmaCh09G002660Cucurbita maxima (Rimu)cmacmoB027
CmoCh09G002600CmaCh05G001600Cucurbita maxima (Rimu)cmacmoB755
CmoCh09G002600Cla020627Watermelon (97103) v1cmowmB018
CmoCh09G002600Cla022604Watermelon (97103) v1cmowmB007
CmoCh09G002600Csa2G355000Cucumber (Chinese Long) v2cmocuB002
CmoCh09G002600Csa4G641730Cucumber (Chinese Long) v2cmocuB011
CmoCh09G002600MELO3C010830Melon (DHL92) v3.5.1cmomeB012
CmoCh09G002600MELO3C016792Melon (DHL92) v3.5.1cmomeB029
CmoCh09G002600ClCG05G020300Watermelon (Charleston Gray)cmowcgB015
CmoCh09G002600ClCG08G016240Watermelon (Charleston Gray)cmowcgB023
CmoCh09G002600CSPI02G18750Wild cucumber (PI 183967)cmocpiB002
CmoCh09G002600CSPI04G24540Wild cucumber (PI 183967)cmocpiB011
CmoCh09G002600Lsi08G015030Bottle gourd (USVL1VR-Ls)cmolsiB020
CmoCh09G002600Lsi04G015120Bottle gourd (USVL1VR-Ls)cmolsiB012
CmoCh09G002600Cp4.1LG11g01290Cucurbita pepo (Zucchini)cmocpeB006
CmoCh09G002600MELO3C010830.2Melon (DHL92) v3.6.1cmomedB012
CmoCh09G002600MELO3C016792.2Melon (DHL92) v3.6.1cmomedB029
CmoCh09G002600CsaV3_4G034780Cucumber (Chinese Long) v3cmocucB0015
CmoCh09G002600CsaV3_2G026380Cucumber (Chinese Long) v3cmocucB0004
CmoCh09G002600Cla97C05G102020Watermelon (97103) v2cmowmbB014
CmoCh09G002600Cla97C08G159900Watermelon (97103) v2cmowmbB023
CmoCh09G002600Bhi09G002688Wax gourdcmowgoB0029
CmoCh09G002600Bhi04G000367Wax gourdcmowgoB0005
CmoCh09G002600CsGy2G018650Cucumber (Gy14) v2cgybcmoB138
CmoCh09G002600CsGy4G022810Cucumber (Gy14) v2cgybcmoB433
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh09G002600CmoCh05G001610Cucurbita moschata (Rifu)cmocmoB033
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh09G002600Silver-seed gourdcarcmoB0255
CmoCh09G002600Silver-seed gourdcarcmoB0542
CmoCh09G002600Silver-seed gourdcarcmoB1040
CmoCh09G002600Cucumber (Chinese Long) v3cmocucB0026
CmoCh09G002600Watermelon (97103) v2cmowmbB000
CmoCh09G002600Wax gourdcmowgoB0017
CmoCh09G002600Cucurbita maxima (Rimu)cmacmoB435
CmoCh09G002600Cucurbita moschata (Rifu)cmocmoB002
CmoCh09G002600Cucurbita moschata (Rifu)cmocmoB004
CmoCh09G002600Cucurbita moschata (Rifu)cmocmoB010
CmoCh09G002600Cucurbita moschata (Rifu)cmocmoB017
CmoCh09G002600Cucurbita moschata (Rifu)cmocmoB028
CmoCh09G002600Cucurbita moschata (Rifu)cmocmoB037
CmoCh09G002600Cucumber (Gy14) v1cgycmoB0621
CmoCh09G002600Cucumber (Gy14) v1cgycmoB0961
CmoCh09G002600Cucumber (Gy14) v1cgycmoB1083
CmoCh09G002600Cucurbita maxima (Rimu)cmacmoB098
CmoCh09G002600Cucurbita maxima (Rimu)cmacmoB164
CmoCh09G002600Cucurbita maxima (Rimu)cmacmoB632
CmoCh09G002600Cucurbita maxima (Rimu)cmacmoB841
CmoCh09G002600Cucurbita pepo (Zucchini)cmocpeB017
CmoCh09G002600Cucurbita pepo (Zucchini)cmocpeB020
CmoCh09G002600Cucurbita pepo (Zucchini)cmocpeB034
CmoCh09G002600Cucurbita pepo (Zucchini)cmocpeB038
CmoCh09G002600Bottle gourd (USVL1VR-Ls)cmolsiB004
CmoCh09G002600Cucumber (Gy14) v2cgybcmoB682
CmoCh09G002600Cucumber (Gy14) v2cgybcmoB873
CmoCh09G002600Melon (DHL92) v3.6.1cmomedB006
CmoCh09G002600Melon (DHL92) v3.6.1cmomedB036