CmoCh09G001680 (gene) Cucurbita moschata (Rifu)

NameCmoCh09G001680
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTransposon Ty1-BL Gag-Pol polyprotein
LocationCmo_Chr09 : 760025 .. 764152 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCGAATCTTCTTATCATCTTCTTCCTTTCAATACTCTAATCCATATGATCACCATCAAACTTTCTTCCTCCAATTATCTTCTTTGGAAAAGCCAGCTTCTCCCTCTCCTTGAGAGTCAAGACATGCTGGGCTATGTCGATGGAACTATGGTTCCACCACCTCGCTTTGAACCAGAAACCTCTTCAACACTCAACCCCAAATATTTGGCATGGAGAGCAGCCGATCAACGACTTCTCTGTCTCCTGCTCTCCTCTCTCACTGAGGAAGCCATGGCTGTTGTCGTTGGTCTCCCTACTGCACGTGATGTTTGGCTTGCGTTGGAAACTACGTTCAGCCATCAATCGAAAGCTCGTGAACTGAGACTCAAGGATGACTTGCAGTTGATGAAACGTGGCACCAAACCTGTTGCTGAGTATGCTCGTGCCTTCAAAAAAATTTGTGACCAACTTCATGCCATTGGCAGACCGGTCGAGGACATTGATAAAGTGCACTGGTTCCTTCGTGGACTCGGCACCGAATTTTCAGCTTTTTCTACTGCTCAGATGGCTCTTACCTCTATCCCCTGTTTTGCAGATTTAGTCTCTAAAGCTGAAAGTTTTGAGTTGTTTCAGCTCTCCCTTGAGTCCTCTAGCTCCACTCCTACAGCATTCACAGTCACTAATCGTGGTCGCACTCATGGAAGCCACCCTGCTTCCTTTACCAACCAGCGAGGTCGTTCTTATTCTCACAAAAACAACTCTTCTAATCGAGGACGAACCCACTCAAGTCAAGGTCGTCGACCACCTCACTGCCAAATATGCCGCAAAGAGGGCCATTATGCTGACCGCTGCAACCAACGGTATGTTCGACCTGATTCTTCTCATGCTCACCTTGCTGAAGCCTTTAACACGTCATGTTCTATTGCTGGACCCGATACTGCTGATTGGTTTCTGGACACTGGAGCTTCGGCCCATATGACTGCCGACCCATCTATTTTGGATCAGTCTAAAAATTACACGGGTAAGGACTCTGTGATTGTAGGAAACGGTGCATCCCTACCCATTACCCACACCGGTACTCTTTCTCCTGTTCCAAATATTCACTTGTTAGATGTCTTGGTTGTCCCTCACCTCACTAAAAATCTTCTTTCCATAAGTAAATTAACGTCTGATTTTCCTCTCTCCGTTACATTTACTAATAATCTTATTACTATCCAGAATCGTCAAACAGGAAGGGTGGTGGCAACCGGTAAAAGAGATGGAGGGCTATATGTGCTGGAGCGCGGCAACTCTGCTTTTATTTCAGCCCTTAGAAACAAATCTTTACATGCTTCATATGATTTATGGCATGCTCGTCTAGGTCATGTGAATCATTCTATTATTTATTTTTTAAATAGAAAAGGTCATCTTTCTCTTACGTCTTTATTGCCTTCTCCATCATTATGTAATACCTGTCAGCTTGCGAAAAGTCATCGATTGCCTTATTCCCGCAATGAACGTAGGTCGTCTCATGTGTTAGATCTTATTCATTGTGATCTTTGGGGTCCTTCTCCTGTCAAATCAAATTCGGGTTTCCTTTATTATGTTATTTTTATTGATGATTATTCTCGATTCACTTGGTTTTACCCTTTAAAATTTAAATCTGATTTTTTTGATATTTTTCTTCAATTTCAAAAATTTGTGGAAAATCAATATTCTTCTCGTATCAAGGTATTTCAAAGCGATGGTGGTACCGAATTTACTAGTACTTGTTTCAAAACTCATTTACGTAATTCTGGCATCCACCATCAACTCTCTTGTCCATATACACCTGCTCAAAATGGTCGTGCCGAGAGAAAACATCGTCATGTGACTGAGACTGGCTTGGCCCTTCTCTTTCACTCTCATCTTTCTTCTCGTTTTTGGGTTGACGCCTTCAGCACTGCAGCTTATATTATCAACCGGTTGCCTACTCCACTTCTTGGAGGTAAGTCACCCTTTGAACTCCTTTATGGTTACACTCCACATTATGACAATTTTCATCCATTTGGTTGTCGTGTTTATCCTTATTTGCGTGATTATATGCCTAACAAGCTTTCTCCCCGCAGCATTCCTTGTATTTTTTTGGGTTATAGTCCTGCTCATAAAGGGTTTCGCTGTCTTGATCCGACCACCACTAAGCTATATATCACCTGTCATGCTCAATTTGATGAAACCCACTTTCCTGCTATTCCTAGCTCCCAGACCCAACCTCTTTCCTCTATTCCTATTTCAAATTTCTTAGAACCACATTTTCATCGTATTGATTCATCCCCCCCTACCACTTCATCACCGCAAACTCCTCGATCCAGTTCATCCCCGTGTGATATTTGTTCTGACCTTGTAGATGAGTCTGTGCAGGTTGATACTTCTCTTACAGGTTCCACTTTGCCACCCTCGACTTCTAATTCGACCTCTATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAGCTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGGTATTTTGGGCTCATCTGGACTTCTTTCTGCTCTTCTTGCATCCACTGAGCCAAAAGGATTCAAATCTGCGGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGCATTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCGTATTAAATATTTGCCTGATGGATCTGTCGAGCGTTTCAAGGCTCGTCTTGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCGGTTGTCAAAGCTACCACTGTCCGTGTTGTGCTTTCTATTGCAGTCACAAATAAATGGCATCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACTCTTATTGAACGTGTTCATATGGAACAACCTCCTGGGTATATTGATCCTCGATTTCCCACTCATGTTTGTCTATTAAAGAAAGCCCTCTATGGTTTAAAGCAAGCTCCTCGTGCTTGGTTTCAGCGTTTTAGCTCATTTCTTCTCACACTTGGGTTTTCTTGCAGTCGCGCTGACACGTCCCTTTTTGTCTTTCATCAGCAATCTAACATTATCTATTTGCTTCTTTATGTTGATGACATTATTGTTACCGGCAACAACTCATCTCTTATTGACAGCTTTACTCGCAAGCTTCATTCTGAGTTTGCTACCAAAGATTTGGGTTCTCTCAGTTACTTTCTTGGTCTTGAAGCTTCACCCACTCCTGATGGTCTCTTTATTAGTCAGTTAAAATATGCTCGAGATATTCTTACTCGTGCTCAGTTGCTCGATAGCAAACCAGTTCACACTCCCATGGTTGTTTCTCAACACCTGACTGCTGATGGTTCTCCTTTCTCTGATCCTACTCTCTACAGATCTCTTGTTGGCGCCCTTCAGTACTTGACTATTACGCGTCCAGATATTGCCTATGCTGTCAATTCTGTCAGTCAATTCTTGCATGCCCCTACTGCAGATCACTTTCTTGCTGTCAAACGTATTCTTCGTTATGTCAAAGGAACACTCCACTTTGGTCTTACCTTTCGTCCATCCACTGTTCCTAGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGTTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTGGTTTCTTGGAGTGCCAAAAAGCAACCTACTGTCTCACGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACCGCTGCTGAACTTCTTTGGGTTACGCATCTTTTGCATGACCTCAAGGTCCCTATTTCAAAGCAGCCCTTACTCTTATGTGACAACAAAAGTGCTATTTTTTTGAGCTCTAATCCCGTTTCTCACAAGCGGGCCAAACATGTTGAACTAGATTATCATTTCCTTCGAGAACTTGTTATCGCTGGCAAACTTCGCACACAATATGTACCCTCTCATCTCCAAGTTGCTGACATCTTCACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTCAGATCCAAGCTTTACGTTCGTTCAAATCCGACGCTCAGCTTGCGGGGGGGTGTTAAGGATAGTTGA

mRNA sequence

ATGGCTTCCGAATCTTCTTATCATCTTCTTCCTTTCAATACTCTAATCCATATGATCACCATCAAACTTTCTTCCTCCAATTATCTTCTTTGGAAAAGCCAGCTTCTCCCTCTCCTTGAGAGTCAAGACATGCTGGGCTATGTCGATGGAACTATGGTTCCACCACCTCGCTTTGAACCAGAAACCTCTTCAACACTCAACCCCAAATATTTGGCATGGAGAGCAGCCGATCAACGACTTCTCTGTCTCCTGCTCTCCTCTCTCACTGAGGAAGCCATGGCTGTTGTCGTTGGTCTCCCTACTGCACGTGATGTTTGGCTTGCGTTGGAAACTACGTTCAGCCATCAATCGAAAGCTCGTGAACTGAGACTCAAGGATGACTTGCAGTTGATGAAACGTGGCACCAAACCTGTTGCTGAGTATGCTCGTGCCTTCAAAAAAATTTGTGACCAACTTCATGCCATTGGCAGACCGGTCGAGGACATTGATAAAGTGCACTGGTTCCTTCGTGGACTCGGCACCGAATTTTCAGCTTTTTCTACTGCTCAGATGGCTCTTACCTCTATCCCCTGTTTTGCAGATTTAGTCTCTAAAGCTGAAAGTTTTGAGTTGTTTCAGCTCTCCCTTGAGTCCTCTAGCTCCACTCCTACAGCATTCACAGTCACTAATCGTGGTCGCACTCATGGAAGCCACCCTGCTTCCTTTACCAACCAGCGAGGTCGTTCTTATTCTCACAAAAACAACTCTTCTAATCGAGGACGAACCCACTCAAGTCAAGGTCGTCGACCACCTCACTGCCAAATATGCCGCAAAGAGGGCCATTATGCTGACCGCTGCAACCAACGGTATGTTCGACCTGATTCTTCTCATGCTCACCTTGCTGAAGCCTTTAACACGTCATGTTCTATTGCTGGACCCGATACTGCTGATTGGTTTCTGGACACTGGAGCTTCGGCCCATATGACTGCCGACCCATCTATTTTGGATCAGTCTAAAAATTACACGGGTAAGGACTCTGTGATTGTAGGAAACGGTGCATCCCTACCCATTACCCACACCGGTACTCTTTCTCCTGTTCCAAATATTCACTTGTTAGATGTCTTGGTTGTCCCTCACCTCACTAAAAATCTTCTTTCCATAAGTAAATTAACGTCTGATTTTCCTCTCTCCGTTACATTTACTAATAATCTTATTACTATCCAGAATCGTCAAACAGGAAGGGTGGTGGCAACCGGTAAAAGAGATGGAGGGCTATATGTGCTGGAGCGCGGCAACTCTGCTTTTATTTCAGCCCTTAGAAACAAATCTTTACATGCTTCATATGATTTATGGCATGCTCGTCTAGGTCATGTGAATCATTCTATTATTTATTTTTTAAATAGAAAAGGTCATCTTTCTCTTACGTCTTTATTGCCTTCTCCATCATTATGTAATACCTGTCAGCTTGCGAAAAGTCATCGATTGCCTTATTCCCGCAATGAACGTAGGTCGTCTCATGTGTTAGATCTTATTCATTGTGATCTTTGGGGTCCTTCTCCTGTCAAATCAAATTCGGGTTTCCTTTATTATGTTATTTTTATTGATGATTATTCTCGATTCACTTGGTTTTACCCTTTAAAATTTAAATCTGATTTTTTTGATATTTTTCTTCAATTTCAAAAATTTGTGGAAAATCAATATTCTTCTCGTATCAAGGTATTTCAAAGCGATGGTGGTACCGAATTTACTAGTACTTGTTTCAAAACTCATTTACGTAATTCTGGCATCCACCATCAACTCTCTTGTCCATATACACCTGCTCAAAATGGTCGTGCCGAGAGAAAACATCGTCATGTGACTGAGACTGGCTTGGCCCTTCTCTTTCACTCTCATCTTTCTTCTCGTTTTTGGGTTGACGCCTTCAGCACTGCAGCTTATATTATCAACCGGTTGCCTACTCCACTTCTTGGAGGTAAGTCACCCTTTGAACTCCTTTATGGTTACACTCCACATTATGACAATTTTCATCCATTTGGTTGTCGTGTTTATCCTTATTTGCGTGATTATATGCCTAACAAGCTTTCTCCCCGCAGCATTCCTTGTATTTTTTTGGGTTATAGTCCTGCTCATAAAGGGTTTCGCTGTCTTGATCCGACCACCACTAAGCTATATATCACCTGTCATGCTCAATTTGATGAAACCCACTTTCCTGCTATTCCTAGCTCCCAGACCCAACCTCTTTCCTCTATTCCTATTTCAAATTTCTTAGAACCACATTTTCATCGTATTGATTCATCCCCCCCTACCACTTCATCACCGCAAACTCCTCGATCCAGTTCATCCCCGTGTGATATTTGTTCTGACCTTGTAGATGAGTCTGTGCAGGTTGATACTTCTCTTACAGGTTCCACTTTGCCACCCTCGACTTCTAATTCGACCTCTATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAGCTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGGTATTTTGGGCTCATCTGGACTTCTTTCTGCTCTTCTTGCATCCACTGAGCCAAAAGGATTCAAATCTGCGGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGCATTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCGTATTAAATATTTGCCTGATGGATCTGTCGAGCGTTTCAAGGCTCGTCTTGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCGGTTGTCAAAGCTACCACTGTCCGTGTTGTGCTTTCTATTGCAGTCACAAATAAATGGCATCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACTCTTATTGAACGTGTTCATATGGAACAACCTCCTGGGTATATTGATCCTCGATTTCCCACTCATGTTTGTCTATTAAAGAAAGCCCTCTATGGTTTAAAGCAAGCTCCTCGTGCTTGGTTTCAGCGTTTTAGCTCATTTCTTCTCACACTTGGGTTTTCTTGCAGTCGCGCTGACACGTCCCTTTTTGTCTTTCATCAGCAATCTAACATTATCTATTTGCTTCTTTATGTTGATGACATTATTGTTACCGGCAACAACTCATCTCTTATTGACAGCTTTACTCGCAAGCTTCATTCTGAGTTTGCTACCAAAGATTTGGGTTCTCTCAGTTACTTTCTTGGTCTTGAAGCTTCACCCACTCCTGATGGTCTCTTTATTAGTCAGTTAAAATATGCTCGAGATATTCTTACTCGTGCTCAGTTGCTCGATAGCAAACCAGTTCACACTCCCATGGTTGTTTCTCAACACCTGACTGCTGATGGTTCTCCTTTCTCTGATCCTACTCTCTACAGATCTCTTGTTGGCGCCCTTCAGTACTTGACTATTACGCGTCCAGATATTGCCTATGCTGTCAATTCTGTCAGTCAATTCTTGCATGCCCCTACTGCAGATCACTTTCTTGCTGTCAAACGTATTCTTCGTTATGTCAAAGGAACACTCCACTTTGGTCTTACCTTTCGTCCATCCACTGTTCCTAGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGTTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTGGTTTCTTGGAGTGCCAAAAAGCAACCTACTGTCTCACGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACCGCTGCTGAACTTCTTTGGGTTACGCATCTTTTGCATGACCTCAAGGTCCCTATTTCAAAGCAGCCCTTACTCTTATGTGACAACAAAAGTGCTATTTTTTTGAGCTCTAATCCCGTTTCTCACAAGCGGGCCAAACATGTTGAACTAGATTATCATTTCCTTCGAGAACTTGTTATCGCTGGCAAACTTCGCACACAATATGTACCCTCTCATCTCCAAGTTGCTGACATCTTCACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTCAGATCCAAGCTTTACGTTCGTTCAAATCCGACGCTCAGCTTGCGGGGGGGTGTTAAGGATAGTTGA

Coding sequence (CDS)

ATGGCTTCCGAATCTTCTTATCATCTTCTTCCTTTCAATACTCTAATCCATATGATCACCATCAAACTTTCTTCCTCCAATTATCTTCTTTGGAAAAGCCAGCTTCTCCCTCTCCTTGAGAGTCAAGACATGCTGGGCTATGTCGATGGAACTATGGTTCCACCACCTCGCTTTGAACCAGAAACCTCTTCAACACTCAACCCCAAATATTTGGCATGGAGAGCAGCCGATCAACGACTTCTCTGTCTCCTGCTCTCCTCTCTCACTGAGGAAGCCATGGCTGTTGTCGTTGGTCTCCCTACTGCACGTGATGTTTGGCTTGCGTTGGAAACTACGTTCAGCCATCAATCGAAAGCTCGTGAACTGAGACTCAAGGATGACTTGCAGTTGATGAAACGTGGCACCAAACCTGTTGCTGAGTATGCTCGTGCCTTCAAAAAAATTTGTGACCAACTTCATGCCATTGGCAGACCGGTCGAGGACATTGATAAAGTGCACTGGTTCCTTCGTGGACTCGGCACCGAATTTTCAGCTTTTTCTACTGCTCAGATGGCTCTTACCTCTATCCCCTGTTTTGCAGATTTAGTCTCTAAAGCTGAAAGTTTTGAGTTGTTTCAGCTCTCCCTTGAGTCCTCTAGCTCCACTCCTACAGCATTCACAGTCACTAATCGTGGTCGCACTCATGGAAGCCACCCTGCTTCCTTTACCAACCAGCGAGGTCGTTCTTATTCTCACAAAAACAACTCTTCTAATCGAGGACGAACCCACTCAAGTCAAGGTCGTCGACCACCTCACTGCCAAATATGCCGCAAAGAGGGCCATTATGCTGACCGCTGCAACCAACGGTATGTTCGACCTGATTCTTCTCATGCTCACCTTGCTGAAGCCTTTAACACGTCATGTTCTATTGCTGGACCCGATACTGCTGATTGGTTTCTGGACACTGGAGCTTCGGCCCATATGACTGCCGACCCATCTATTTTGGATCAGTCTAAAAATTACACGGGTAAGGACTCTGTGATTGTAGGAAACGGTGCATCCCTACCCATTACCCACACCGGTACTCTTTCTCCTGTTCCAAATATTCACTTGTTAGATGTCTTGGTTGTCCCTCACCTCACTAAAAATCTTCTTTCCATAAGTAAATTAACGTCTGATTTTCCTCTCTCCGTTACATTTACTAATAATCTTATTACTATCCAGAATCGTCAAACAGGAAGGGTGGTGGCAACCGGTAAAAGAGATGGAGGGCTATATGTGCTGGAGCGCGGCAACTCTGCTTTTATTTCAGCCCTTAGAAACAAATCTTTACATGCTTCATATGATTTATGGCATGCTCGTCTAGGTCATGTGAATCATTCTATTATTTATTTTTTAAATAGAAAAGGTCATCTTTCTCTTACGTCTTTATTGCCTTCTCCATCATTATGTAATACCTGTCAGCTTGCGAAAAGTCATCGATTGCCTTATTCCCGCAATGAACGTAGGTCGTCTCATGTGTTAGATCTTATTCATTGTGATCTTTGGGGTCCTTCTCCTGTCAAATCAAATTCGGGTTTCCTTTATTATGTTATTTTTATTGATGATTATTCTCGATTCACTTGGTTTTACCCTTTAAAATTTAAATCTGATTTTTTTGATATTTTTCTTCAATTTCAAAAATTTGTGGAAAATCAATATTCTTCTCGTATCAAGGTATTTCAAAGCGATGGTGGTACCGAATTTACTAGTACTTGTTTCAAAACTCATTTACGTAATTCTGGCATCCACCATCAACTCTCTTGTCCATATACACCTGCTCAAAATGGTCGTGCCGAGAGAAAACATCGTCATGTGACTGAGACTGGCTTGGCCCTTCTCTTTCACTCTCATCTTTCTTCTCGTTTTTGGGTTGACGCCTTCAGCACTGCAGCTTATATTATCAACCGGTTGCCTACTCCACTTCTTGGAGGTAAGTCACCCTTTGAACTCCTTTATGGTTACACTCCACATTATGACAATTTTCATCCATTTGGTTGTCGTGTTTATCCTTATTTGCGTGATTATATGCCTAACAAGCTTTCTCCCCGCAGCATTCCTTGTATTTTTTTGGGTTATAGTCCTGCTCATAAAGGGTTTCGCTGTCTTGATCCGACCACCACTAAGCTATATATCACCTGTCATGCTCAATTTGATGAAACCCACTTTCCTGCTATTCCTAGCTCCCAGACCCAACCTCTTTCCTCTATTCCTATTTCAAATTTCTTAGAACCACATTTTCATCGTATTGATTCATCCCCCCCTACCACTTCATCACCGCAAACTCCTCGATCCAGTTCATCCCCGTGTGATATTTGTTCTGACCTTGTAGATGAGTCTGTGCAGGTTGATACTTCTCTTACAGGTTCCACTTTGCCACCCTCGACTTCTAATTCGACCTCTATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAGCTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGGTATTTTGGGCTCATCTGGACTTCTTTCTGCTCTTCTTGCATCCACTGAGCCAAAAGGATTCAAATCTGCGGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGCATTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCGTATTAAATATTTGCCTGATGGATCTGTCGAGCGTTTCAAGGCTCGTCTTGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCGGTTGTCAAAGCTACCACTGTCCGTGTTGTGCTTTCTATTGCAGTCACAAATAAATGGCATCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACTCTTATTGAACGTGTTCATATGGAACAACCTCCTGGGTATATTGATCCTCGATTTCCCACTCATGTTTGTCTATTAAAGAAAGCCCTCTATGGTTTAAAGCAAGCTCCTCGTGCTTGGTTTCAGCGTTTTAGCTCATTTCTTCTCACACTTGGGTTTTCTTGCAGTCGCGCTGACACGTCCCTTTTTGTCTTTCATCAGCAATCTAACATTATCTATTTGCTTCTTTATGTTGATGACATTATTGTTACCGGCAACAACTCATCTCTTATTGACAGCTTTACTCGCAAGCTTCATTCTGAGTTTGCTACCAAAGATTTGGGTTCTCTCAGTTACTTTCTTGGTCTTGAAGCTTCACCCACTCCTGATGGTCTCTTTATTAGTCAGTTAAAATATGCTCGAGATATTCTTACTCGTGCTCAGTTGCTCGATAGCAAACCAGTTCACACTCCCATGGTTGTTTCTCAACACCTGACTGCTGATGGTTCTCCTTTCTCTGATCCTACTCTCTACAGATCTCTTGTTGGCGCCCTTCAGTACTTGACTATTACGCGTCCAGATATTGCCTATGCTGTCAATTCTGTCAGTCAATTCTTGCATGCCCCTACTGCAGATCACTTTCTTGCTGTCAAACGTATTCTTCGTTATGTCAAAGGAACACTCCACTTTGGTCTTACCTTTCGTCCATCCACTGTTCCTAGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGTTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTGGTTTCTTGGAGTGCCAAAAAGCAACCTACTGTCTCACGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACCGCTGCTGAACTTCTTTGGGTTACGCATCTTTTGCATGACCTCAAGGTCCCTATTTCAAAGCAGCCCTTACTCTTATGTGACAACAAAAGTGCTATTTTTTTGAGCTCTAATCCCGTTTCTCACAAGCGGGCCAAACATGTTGAACTAGATTATCATTTCCTTCGAGAACTTGTTATCGCTGGCAAACTTCGCACACAATATGTACCCTCTCATCTCCAAGTTGCTGACATCTTCACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTCAGATCCAAGCTTTACGTTCGTTCAAATCCGACGCTCAGCTTGCGGGGGGGTGTTAAGGATAGTTGA
BLAST of CmoCh09G001680 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.4e-155
Identity = 425/1388 (30.62%), Postives = 657/1388 (47.33%), Query Frame = 1

Query: 26   SNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQRLLCLLL 85
            + +  W+ ++  LL  Q +   +D     P   + E           W   D+R    + 
Sbjct: 15   NGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAED----------WADLDERAASAIR 74

Query: 86   SSLTEEAMAVVVGLPTARDVWLALETTFSHQSKARELRLKDDLQL--MKRGTKPVAEYAR 145
              L+++ +  ++   TAR +W  LE+ +  ++   +L LK  L    M  GT  ++ +  
Sbjct: 75   LHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLS-HLN 134

Query: 146  AFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESFE 205
             F  +  QL  +G  +E+ DK    L  L + +   +T  +   +     D+ S     E
Sbjct: 135  VFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNE 194

Query: 206  LFQLSLESSSSTPTAFTVTNRGRTHGSHPASFTNQRGRSYSHKNN----SSNRGRTHSSQ 265
              +   E            N+G+      A  T  RGRSY   +N    S  RG++ +  
Sbjct: 195  KMRKKPE------------NQGQ------ALITEGRGRSYQRSSNNYGRSGARGKSKNRS 254

Query: 266  GRRPPHCQICRKEGHYADRC-NQRYVRPDSSHAHLAEAFNTSCSIAGPDT---------- 325
              R  +C  C + GH+   C N R  + ++S     +  NT+  +   D           
Sbjct: 255  KSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDD--NTAAMVQNNDNVVLFINEEEE 314

Query: 326  --------ADWFLDTGASAHMTADPSILDQSKNYTGKD--SVIVGNGASLPITHTGTLSP 385
                    ++W +DT AS H T    + D    Y   D  +V +GN +   I   G +  
Sbjct: 315  CMHLSGPESEWVVDTAASHHATP---VRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICI 374

Query: 386  VPNIH----LLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLITIQNRQTGRVVATGKR 445
              N+     L DV  VP L  NL+S   L  D   S  F N    +       V+A G  
Sbjct: 375  KTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESY-FANQKWRLTKGSL--VIAKGVA 434

Query: 446  DGGLYVLERGNSAFISALRNKSL-HASYDLWHARLGHVNHSIIYFLNRKGHLSL---TSL 505
             G LY   R N+       N +    S DLWH R+GH++   +  L +K  +S    T++
Sbjct: 435  RGTLY---RTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTV 494

Query: 506  LPSPSLCNTCQLAKSHRLPYSRNERRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDY 565
             P    C+ C   K HR+ +  +  R  ++LDL++ D+ GP  ++S  G  Y+V FIDD 
Sbjct: 495  KP----CDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDA 554

Query: 566  SRFTWFYPLKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIH 625
            SR  W Y LK K   F +F +F   VE +   ++K  +SD G E+TS  F+ +  + GI 
Sbjct: 555  SRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIR 614

Query: 626  HQLSCPYTPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLG 685
            H+ + P TP  NG AER +R + E   ++L  + L   FW +A  TA Y+INR P+  L 
Sbjct: 615  HEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLA 674

Query: 686  GKSPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLGYSPAHKGFRCLD 745
             + P  +       Y +   FGCR + ++      KL  +SIPCIF+GY     G+R  D
Sbjct: 675  FEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWD 734

Query: 746  PTTTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDS-SPPTTSSPQTP 805
            P   K+  +    F E+        +T    S  + N + P+F  I S S   TS+  T 
Sbjct: 735  PVKKKVIRSRDVVFRESEV------RTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTT 794

Query: 806  RSSSSPCDICSDLVDESVQVDTSLTGSTLPPSTSNSTSIEPPVDFSSLGTHPMITRAKAG 865
               S   +   +++++  Q+D  +              +E P         P+    +  
Sbjct: 795  DEVSEQGEQPGEVIEQGEQLDEGVE------------EVEHPTQGEEQH-QPLRRSERPR 854

Query: 866  IFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPA---WVAAMDEEIRALQQNDTW 925
            +   R+P+   +L S           EP+  K    +P     + AM EE+ +LQ+N T+
Sbjct: 855  VESRRYPSTEYVLISD--------DREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTY 914

Query: 926  TLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATT 985
             LV  P     +  KWVF++K   D  + R+KARLV KG+ Q  G+D+ + FSPVVK T+
Sbjct: 915  KLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTS 974

Query: 986  VRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGL 1045
            +R +LS+A +    + QLDVK AFL+G L E ++MEQP G+        VC L K+LYGL
Sbjct: 975  IRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGL 1034

Query: 1046 KQAPRAWFQRFSSFLLTLGFSCSRADTSL-FVFHQQSNIIYLLLYVDDIIVTGNNSSLID 1105
            KQAPR W+ +F SF+ +  +  + +D  + F    ++N I LLLYVDD+++ G +  LI 
Sbjct: 1035 KQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIA 1094

Query: 1106 SFTRKLHSEFATKDLGSLSYFLGLE--ASPTPDGLFISQLKYARDILTRAQLLDSKPVHT 1165
                 L   F  KDLG     LG++     T   L++SQ KY   +L R  + ++KPV T
Sbjct: 1095 KLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVST 1154

Query: 1166 PMVVSQHLTADGSPFS-------DPTLYRSLVGALQY-LTITRPDIAYAVNSVSQFLHAP 1225
            P+     L+    P +           Y S VG+L Y +  TRPDIA+AV  VS+FL  P
Sbjct: 1155 PLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENP 1214

Query: 1226 TADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLG 1285
              +H+ AVK ILRY++GT    L F  S     L  Y+DAD AG  D R+S++GY     
Sbjct: 1215 GKEHWEAVKWILRYLRGTTGDCLCFGGS--DPILKGYTDADMAGDIDNRKSSTGYLFTFS 1274

Query: 1286 NNLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSA 1345
               +SW +K Q  V+ S+ E+EY A   T  E++W+   L +L +   K+ ++ CD++SA
Sbjct: 1275 GGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLH-QKEYVVYCDSQSA 1328

Query: 1346 IFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFR 1364
            I LS N + H R KH+++ YH++RE+V    L+   + ++   AD+ TK + R  FE  +
Sbjct: 1335 IDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCK 1328

BLAST of CmoCh09G001680 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 344.0 bits (881), Expect = 7.7e-93
Identity = 186/497 (37.42%), Postives = 291/497 (58.55%), Query Frame = 1

Query: 868  AWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYT 927
            +W  A++ E+ A + N+TWT+  RP N NIV S+WVF +KY   G+  R+KARLVA+G+T
Sbjct: 905  SWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFT 964

Query: 928  QVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGY 987
            Q   +DY +TF+PV + ++ R +LS+ +     + Q+DVK AFLNGTL E ++M  P G 
Sbjct: 965  QKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI 1024

Query: 988  IDPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNI--- 1047
                   +VC L KA+YGLKQA R WF+ F   L    F  S  D  +++   + NI   
Sbjct: 1025 --SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYIL-DKGNINEN 1084

Query: 1048 IYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLK 1107
            IY+LLYVDD+++   + + +++F R L  +F   DL  + +F+G+      D +++SQ  
Sbjct: 1085 IYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSA 1144

Query: 1108 YARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTI-TRPDIAY 1167
            Y + IL++  + +   V TP+    +     S     T  RSL+G L Y+ + TRPD+  
Sbjct: 1145 YVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTT 1204

Query: 1168 AVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPS-TVPSTLVAYSDADWAGCPD 1227
            AVN +S++     ++ +  +KR+LRY+KGT+   L F+ +    + ++ Y D+DWAG   
Sbjct: 1205 AVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEI 1264

Query: 1228 TRRSTSGYSIYLGN-NLVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVP 1287
             R+ST+GY   + + NL+ W+ K+Q +V+ SS E+EY AL     E LW+  LL  + + 
Sbjct: 1265 DRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIK 1324

Query: 1288 ISKQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADI 1347
            +     +  DN+  I +++NP  HKRAKH+++ YHF RE V    +  +Y+P+  Q+ADI
Sbjct: 1325 LENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADI 1384

Query: 1348 FTKSISRPLFEFFRSKL 1359
            FTK +    F   R KL
Sbjct: 1385 FTKPLPAARFVELRDKL 1398

BLAST of CmoCh09G001680 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.2e-63
Identity = 121/226 (53.54%), Postives = 165/226 (73.01%), Query Frame = 1

Query: 1045 IYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLK 1104
            +YLLLYVDDI++TG++++L++    +L S F+ KDLG + YFLG++    P GLF+SQ K
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 1105 YARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYA 1164
            YA  IL  A +LD KP+ TP+ +  + +   + + DP+ +RS+VGALQYLT+TRPDI+YA
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 120

Query: 1165 VNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTR 1224
            VN V Q +H PT   F  +KR+LRYVKGT+  GL    ++    + A+ D+DWAGC  TR
Sbjct: 121  VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNS-KLNVQAFCDSDWAGCTSTR 180

Query: 1225 RSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLW 1271
            RST+G+  +LG N++SWSAK+QPTVSRSS E+EYRALA TAAEL W
Sbjct: 181  RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmoCh09G001680 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 2.2e-39
Identity = 104/309 (33.66%), Postives = 161/309 (52.10%), Query Frame = 1

Query: 964  LDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLT 1023
            +DV  AFLN T+ E ++++QPPG+++ R P +V  L   +YGLKQAP  W +  ++ L  
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 1024 LGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSL 1083
            +GF     +  L+        IY+ +YVDD++V   +  + D   ++L   ++ KDLG +
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 1084 SYFLGLEASPTPDG-LFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSP-FSDP 1143
              FLGL    + +G + +S   Y     + +++   K   TP+  S+ L    SP   D 
Sbjct: 121  DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 1144 TLYRSLVGALQYLTIT-RPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTF 1203
            T Y+S+VG L +   T RPDI+Y V+ +S+FL  P A H  + +R+LRY+  T    L +
Sbjct: 181  TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 1204 RPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKK-QPTVSRSSCESEYR 1263
            R S     L  Y DA      D   ST GY   L    V+WS+KK +  +   S E+EY 
Sbjct: 241  R-SGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYI 300

Query: 1264 ALATTAAEL 1269
              + T  E+
Sbjct: 301  TASETVMEI 308

BLAST of CmoCh09G001680 vs. Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-25
Identity = 61/133 (45.86%), Postives = 83/133 (62.41%), Query Frame = 1

Query: 822 MITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQ 881
           M+TR+KAGI K     +L I  +           EPK    A K+P W  AM EE+ AL 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTT--------IKKEPKSVIFALKDPGWCQAMQEELDALS 60

Query: 882 QNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPV 941
           +N TW LVP P N NI+G KWVF+ K   DG+++R KARLVAKG+ Q  G+ + +T+SPV
Sbjct: 61  RNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPV 120

Query: 942 VKATTVRVVLSIA 955
           V+  T+R +L++A
Sbjct: 121 VRTATIRTILNVA 125

BLAST of CmoCh09G001680 vs. TrEMBL
Match: A5AKX4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015518 PE=4 SV=1)

HSP 1 Score: 1986.1 bits (5144), Expect = 0.0e+00
Identity = 1008/1189 (84.78%), Postives = 1055/1189 (88.73%), Query Frame = 1

Query: 1    MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEP 60
            MASESS HLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQD+L YVDGT+VPPPRFEP
Sbjct: 1    MASESS-HLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLAYVDGTLVPPPRFEP 60

Query: 61   ETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKAR 120
            ETS+TL+ KYLAW+AADQRLLCLLLSSLTEEA+AVVVGL TAR+VWLALE TFSH SKAR
Sbjct: 61   ETSTTLSTKYLAWKAADQRLLCLLLSSLTEEAIAVVVGLSTAREVWLALENTFSHHSKAR 120

Query: 121  ELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFS 180
            ELRLKDDLQLMK GTKPVAEYAR FK +CDQLHAIGRPVED DKVHWFLRG    F  F 
Sbjct: 121  ELRLKDDLQLMKCGTKPVAEYARTFKTLCDQLHAIGRPVEDTDKVHWFLRGTRPRFFQF- 180

Query: 181  TAQMALTSIPCFADLVSKAESFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQ 240
                                 F     SLESS  T  AFT TNR RT  HG+  A   NQ
Sbjct: 181  ---------------------FYSSNXSLESSEPTTAAFTATNRSRTTSHGTPFAFRNNQ 240

Query: 241  RGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN 300
            RGRS+SH NNSSNRGRT+S  GRRPP CQICR EGHYADRCNQRY R DSS AHLAEAFN
Sbjct: 241  RGRSHSHNNNSSNRGRTYSGHGRRPPRCQICRIEGHYADRCNQRYARTDSS-AHLAEAFN 300

Query: 301  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSP 360
            TSCS++GP+ ADWFLDTGASAHMT DPS LDQSKNY GKDSVIVGNGASLPITHTGTLSP
Sbjct: 301  TSCSLSGPEAADWFLDTGASAHMTTDPSXLDQSKNYMGKDSVIVGNGASLPITHTGTLSP 360

Query: 361  VPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLITIQNRQTGRVVATGKRDGGL 420
            VPNIHLLDVLVV HLTKNLLSISKLTSDFPLSVTFTNNL T+QNRQTGR VATGKRDGGL
Sbjct: 361  VPNIHLLDVLVVXHLTKNLLSISKLTSDFPLSVTFTNNLFTVQNRQTGRXVATGKRDGGL 420

Query: 421  YVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCN 480
            YVLERGNSAFIS L+NKSL ASYDLWHARLGH              LSLTSLLPSPSLC+
Sbjct: 421  YVLERGNSAFISVLKNKSLRASYDLWHARLGH--------------LSLTSLLPSPSLCS 480

Query: 481  TCQLAKSHRLPYSRNERRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYP 540
            TCQLAK+HRLPYSRNE RSSHVLDLIHCDLWGPSP+KSNSGFLYYVIFIDDYSRFTW YP
Sbjct: 481  TCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSGFLYYVIFIDDYSRFTWLYP 540

Query: 541  LKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT 600
            LKFKSDFFDIFLQFQKFVENQ+S+RIKVFQSDGG EFT+TCFK HLR SGIHHQLSCPYT
Sbjct: 541  LKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGAEFTNTCFKAHLRTSGIHHQLSCPYT 600

Query: 601  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELL 660
            PAQNGRAERKHRHVTETGLALLFHSHLS RFWVDAFSTA YIINRLPTPLLGGKSPFELL
Sbjct: 601  PAQNGRAERKHRHVTETGLALLFHSHLSPRFWVDAFSTATYIINRLPTPLLGGKSPFELL 660

Query: 661  YGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLGYSPAHKGFRCLDPTTTKLYI 720
            YG +PHY+NFHPFGCRVYP LRDYMPNKLSPRSIPCIFLGYSP+HKGFRCLDPTT++LYI
Sbjct: 661  YGXSPHYENFHPFGCRVYPCLRDYMPNKLSPRSIPCIFLGYSPSHKGFRCLDPTTSRLYI 720

Query: 721  TCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPC 780
            T HAQFDETHFP +PSSQ QPLSS+ ISNFLEP  H ID SPP+  SP +  PRS+SSPC
Sbjct: 721  TRHAQFDETHFPTVPSSQAQPLSSLHISNFLEPRLHHIDPSPPSPPSPSSHIPRSNSSPC 780

Query: 781  DICSDLVDESVQVDTSLTGSTLPPSTSNSTSIEPPVDFS-SLGTHPMITRAKAGIFKTRH 840
            +ICSDLVDESVQVDTSL GS+LPP  S+  SIE   D S SLG+HPMITRAKAGIFKTRH
Sbjct: 781  NICSDLVDESVQVDTSLAGSSLPPLASSPHSIEHAADSSSSLGSHPMITRAKAGIFKTRH 840

Query: 841  PANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT 900
            PANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NT
Sbjct: 841  PANLGVLGSSGLLXALLASTEPKGFKSAAKNPAWLAAMDEEVQALQQNGTWILVPRPVNT 900

Query: 901  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAV 960
            NIVGSKWVFR KYLPDGSVER KARLVAKGYT VPGLDYTDTFSPVVKATTVRVVLS+AV
Sbjct: 901  NIVGSKWVFRTKYLPDGSVERLKARLVAKGYTXVPGLDYTDTFSPVVKATTVRVVLSLAV 960

Query: 961  TNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQ 1020
            TNKW LRQLDVKNAFLNGTL E V+MEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQ
Sbjct: 961  TNKWPLRQLDVKNAFLNGTLTEHVYMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQ 1020

Query: 1021 RFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEF 1080
            RFSSFLLTLGFSCSRADTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFTRKLHSEF
Sbjct: 1021 RFSSFLLTLGFSCSRADTSLFVFHQQSSLIYLLLYVDDIIVTGNNPSLLDSFTRKLHSEF 1080

Query: 1081 ATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADG 1140
            ATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  G
Sbjct: 1081 ATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTVAG 1140

Query: 1141 SPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVK 1185
            SPFS+PTLYRSLVGALQYLTI RPDIA+AVNSVSQFLHAPT DHFLAVK
Sbjct: 1141 SPFSNPTLYRSLVGALQYLTIXRPDIAHAVNSVSQFLHAPTIDHFLAVK 1151

BLAST of CmoCh09G001680 vs. TrEMBL
Match: A5CAZ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002539 PE=4 SV=1)

HSP 1 Score: 1780.0 bits (4609), Expect = 0.0e+00
Identity = 923/1386 (66.59%), Postives = 1077/1386 (77.71%), Query Frame = 1

Query: 12   FNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPP--RFEPETSSTLNPK 71
            FNT+IHMITIKLSS+NYLLW++QLLPLL+ Q++L +VDG++ PPP       +SS  NP+
Sbjct: 8    FNTMIHMITIKLSSTNYLLWRNQLLPLLQCQNLLSHVDGSVAPPPITIAVDSSSSQPNPQ 67

Query: 72   YLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKARELRLKDDLQ 131
            Y+AW+  DQRLL LL SSLTEEAM  V+GL TARDVWLALE +FSH SK  ELR+KDDLQ
Sbjct: 68   YVAWQLQDQRLLSLLFSSLTEEAMTEVLGLTTARDVWLALENSFSHISKTCELRIKDDLQ 127

Query: 132  LMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSI 191
            L+KRGT+ V EY+R+FK +CDQL A+GR V+D DKVHW+LRGLG +F+ FSTAQM+LT +
Sbjct: 128  LIKRGTRSVTEYSRSFKALCDQLTAMGRSVDDTDKVHWYLRGLGADFANFSTAQMSLTPL 187

Query: 192  PCFADLVSKAESFELFQLSLESSSSTPTAFTVTNRGRTHGSHPASFTNQRGRSYSHKNNS 251
            P F DLV KAESFE+FQ SL SS        V +  R     P ++T             
Sbjct: 188  PVFKDLVPKAESFEIFQKSLGSSF---PFLQVPSFSRWLPWRPWTWTF------------ 247

Query: 252  SNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFNTSCSIAGPDTA 311
                          P CQIC+ EGH ADRC  RY R + + A LAEAF T+CS++    +
Sbjct: 248  --------------PRCQICKTEGHTADRCRSRYDRAEPT-AQLAEAFTTTCSLSNGSES 307

Query: 312  DWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLV 371
            DWF DTGASAHMT DPS LD+ + Y GKD VIVGNGASLPITHTGTLS   N+ LLDVLV
Sbjct: 308  DWFTDTGASAHMTPDPSQLDKVEPYHGKDCVIVGNGASLPITHTGTLSSSSNLQLLDVLV 367

Query: 372  VPHLTKNLLSISKLTSDFPLSVTFTNNLITIQNRQTGRVVATGKRDGGLYVLERGNSAFI 431
            VP LTKNLLSISKLTSDFPLSVTF+++   +QNR TG  VA GKR GGLYVLERG+SAF 
Sbjct: 368  VPRLTKNLLSISKLTSDFPLSVTFSHDNFVVQNRITGMAVAKGKRAGGLYVLERGHSAFA 427

Query: 432  SALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLP 491
            S LRNK+LHAS++LWHARLGHVNHSI+  LN+KG L LTSLLP+PSLC+TCQLAKSHRLP
Sbjct: 428  SVLRNKNLHASFELWHARLGHVNHSILSLLNKKGQLFLTSLLPTPSLCSTCQLAKSHRLP 487

Query: 492  YSRNERRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIF 551
            +S N  RS+ VL L+HCD+WG +PVKSN GF YYV+FIDDYSRFTW YPLK KSDFFDIF
Sbjct: 488  FSSNTTRSNVVLGLVHCDIWGLAPVKSNLGFNYYVLFIDDYSRFTWLYPLKLKSDFFDIF 547

Query: 552  LQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYTPAQNGRAERKH 611
            LQFQK VENQYS++IK+FQSDGG EFTS  F++HL+  GIHHQ+SCPYTP+QNGRAERKH
Sbjct: 548  LQFQKLVENQYSTKIKIFQSDGGAEFTSNRFQSHLQQFGIHHQMSCPYTPSQNGRAERKH 607

Query: 612  RHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFH 671
            RHVTETGLALLFHSH+  R+WVDAFSTA YIINRLP P+LGG SPFE+L+G +P+Y+NFH
Sbjct: 608  RHVTETGLALLFHSHVPPRYWVDAFSTATYIINRLPLPVLGGLSPFEVLFGKSPNYENFH 667

Query: 672  PFGCRVYPYLRDYMPNKLSPRSIPCIFLGYSPAHKGFRCLDPTTTKLYITCHAQFDETHF 731
            PFGCRVYP LRDY P+K SPRS+PCIFLGYS +HKGFRC D TT++ YIT HA+FDE  F
Sbjct: 668  PFGCRVYPCLRDYAPHKFSPRSLPCIFLGYSSSHKGFRCFDTTTSRTYITRHARFDEHFF 727

Query: 732  PAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQTPRSSSSP-CDICSDLVDESVQ 791
            P   +S    ++ I +SNF EP    ++ S P+TSSP T R   SP C  C+D       
Sbjct: 728  PFSNTSSATSIADIGLSNFFEP--CALEPS-PSTSSPTTTRVPPSPSCHFCAD----DFA 787

Query: 792  VDTSLTGSTLPPSTSNSTSIEP-PVDFSSL------------------GTHPMITRAKAG 851
            V+     S+ P STS+S ++ P P   ++L                   +HPMITRAK+G
Sbjct: 788  VEPLQVSSSAPESTSSSAAVSPVPASMTTLVPFAAPMDPIHTTTSATPASHPMITRAKSG 847

Query: 852  IFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLV 911
            IFK RHP++L  + SS L+ ALLA++EPKGFKSAAKNPAW+AAMD+EI+ LQ N TW LV
Sbjct: 848  IFKPRHPSHLSFVQSSPLIHALLATSEPKGFKSAAKNPAWLAAMDDEIKVLQTNHTWDLV 907

Query: 912  PRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRV 971
            PRP+NTNIVGSKWVFR K+L DGS+ERFKARLVAKGYTQ+P             A+TVRV
Sbjct: 908  PRPSNTNIVGSKWVFRTKFLSDGSIERFKARLVAKGYTQLP-------------ASTVRV 967

Query: 972  VLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGLKQA 1031
            VLS+ V++KW L QLDVKNAFLNG L E V+MEQPPGY+DPR P HVC LKKALY LKQA
Sbjct: 968  VLSLVVSHKWPLCQLDVKNAFLNGILHETVYMEQPPGYVDPRHPLHVCKLKKALYDLKQA 1027

Query: 1032 PRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTR 1091
            PRAWFQRFSSFLL LGF CSRA TSLFVF  + ++IYLLLYVDDII+TGNN +LI+ F  
Sbjct: 1028 PRAWFQRFSSFLLKLGFFCSRAYTSLFVFTMKDDLIYLLLYVDDIILTGNNPTLINRFIS 1087

Query: 1092 KLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQ 1151
            +LHSEFA KDLG LSYFLGLE S  PDG F+SQ+KYA DIL RAQLLDSKPV TPM+VSQ
Sbjct: 1088 QLHSEFAVKDLGPLSYFLGLEVSYIPDGFFLSQVKYATDILARAQLLDSKPVPTPMIVSQ 1147

Query: 1152 HLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRY 1211
             L+++G+PF+DPTLYRSLVGALQYLTIT PD+A++VNSVSQFLHAPT  HF AVKRILRY
Sbjct: 1148 RLSSEGTPFADPTLYRSLVGALQYLTITCPDLAHSVNSVSQFLHAPTEVHFQAVKRILRY 1207

Query: 1212 VKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTV 1271
            V+GTLHFGL F  S     LVAYSD DWAGCPDTRRSTSGY            AKKQPTV
Sbjct: 1208 VQGTLHFGLKF-TSCSSMGLVAYSDEDWAGCPDTRRSTSGY------------AKKQPTV 1267

Query: 1272 SRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAK 1331
            SRSSCESEYRALA TAAE+LW+THLL DL+V ++ +PLLLCDNKSAIFLSSNPVSHKRAK
Sbjct: 1268 SRSSCESEYRALALTAAEVLWLTHLLRDLRVTLTHRPLLLCDNKSAIFLSSNPVSHKRAK 1327

Query: 1332 HVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLR 1376
            HV+LDYHFLREL++AG LR Q++PSHLQ+AD+FTKS+SR L+ FFRSKL V  NPTLSLR
Sbjct: 1328 HVDLDYHFLRELIVAGTLRIQHIPSHLQLADVFTKSVSRDLYVFFRSKLRVCVNPTLSLR 1330

BLAST of CmoCh09G001680 vs. TrEMBL
Match: A0A151TC71_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan GN=KK1_019216 PE=4 SV=1)

HSP 1 Score: 1408.3 bits (3644), Expect = 0.0e+00
Identity = 735/1315 (55.89%), Postives = 944/1315 (71.79%), Query Frame = 1

Query: 83   LLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYA 142
            LLLSSLTEEA++  +   TARD+W AL T ++ +SKARELRL+D+LQLM+RG+  V EY 
Sbjct: 4    LLLSSLTEEALSETLSADTARDIWNALHTAYASRSKARELRLRDELQLMRRGSISVTEYG 63

Query: 143  RAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESF 202
            + F+ ICDQL AIG P+ + DKVHWFLRGLG  ++ FST Q+    +P F D++S     
Sbjct: 64   KKFRTICDQLAAIGAPIANDDKVHWFLRGLGPSYANFSTGQLDQVPLPRFTDILSA---- 123

Query: 203  ELFQLSLESSSSTPTAFTVTNRGRTH-GSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGR 262
              F  + +  SS   +    NRG ++ GS+  +  N  G S   +NNS  R         
Sbjct: 124  --FYANNQPRSSGNQSSRSGNRGHSNDGSNGGNRGNSNGGSRQRRNNSGRRNSY------ 183

Query: 263  RPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFNTSCSIAGPDTADWFLDTGASAHM 322
              P CQICR++GHYA++C  R+ R   S A+LA+AF  SCS+   + +DW++DTGA++HM
Sbjct: 184  -VPRCQICREQGHYANKCPVRWDRSSES-ANLAQAFAASCSVDTSNQSDWYMDTGATSHM 243

Query: 323  TADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSIS 382
            T   S L  S+NY G D V VGNG SL ITH G+ S    + L DVLVVP+LTKNL+S+S
Sbjct: 244  TPSSSQLTDSQNYNGTDRVFVGNGTSLNITHVGSRSLSHIVPLSDVLVVPNLTKNLVSVS 303

Query: 383  KLTSDFPLSVTFTNNLITIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSL-HAS 442
            KLT D      F ++   IQNR+TGRV+A G+ D GLYV+++G  A ++   + SL  AS
Sbjct: 304  KLTRDNHAKAIFVDDSFVIQNRKTGRVLARGRCDQGLYVMDQGPQALLTT--SSSLPRAS 363

Query: 443  YDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSSHV 502
            ++LWH+RLGHVN  +I  LN++G+L+++S+LP P  C TCQ+AKS RL +  N +R+S V
Sbjct: 364  FELWHSRLGHVNFDVINKLNKQGYLNVSSILPKPICCTTCQMAKSKRLVFYDNNKRASAV 423

Query: 503  LDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQY 562
            LDLIHCDLWGPSPV S +G+ Y+VIF+DD+SRFTWFYPL+ KSDF+D+ ++F+ FVENQ+
Sbjct: 424  LDLIHCDLWGPSPVASVAGYSYFVIFVDDFSRFTWFYPLRHKSDFYDVLVRFKVFVENQF 483

Query: 563  SSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYTPAQNGRAERKHRHVTETGLALL 622
            S  IKVFQSD GTEFT+   +    +SG+ H+ SCP+T AQNGR ERKHRHV E GLA+L
Sbjct: 484  SRFIKVFQSDNGTEFTNNKVQDLFASSGVLHRFSCPHTQAQNGRVERKHRHVLEIGLAML 543

Query: 623  FHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLR 682
            + SH+ +R+WVDAFS+A YIINR+P+ +L G+ PF LL+   P Y NFHPFGCRV+P LR
Sbjct: 544  YQSHVPTRYWVDAFSSAVYIINRVPSQVLSGQIPFTLLFQVAPTYANFHPFGCRVFPCLR 603

Query: 683  DYMPNKLSPRSIPCIFLGYSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPL 742
             YM NK SPRS PCIFLGYS  HKGF+CLD TT+++Y++ HAQFDET FP   S    P 
Sbjct: 604  PYMKNKFSPRSSPCIFLGYSSHHKGFKCLDLTTSRIYVSRHAQFDETCFPFAGS----PS 663

Query: 743  SSIP--ISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS 802
            SSI   +S+F EP      SS   +SS  T  P  ++  C  C       V +D +L   
Sbjct: 664  SSIDLMVSSFYEPITGFKSSSMSASSSLPTRPPPVTTLSCPSC-------VSLDAALAPH 723

Query: 803  TLPP-STSNSTSIEPPVDFSSLGTHPMI-------------------TRAKAGIFKTRHP 862
              PP + ++S  + PP   S   T P++                   TR++ GIF+    
Sbjct: 724  PAPPVAPASSEPVSPPRTPSPASTSPIVLPASSDASIQPAPVAVRMQTRSQNGIFRPNPR 783

Query: 863  ANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTN 922
              L     + LL+AL  +++PKGFKSA K+P W+AAM++E+ AL+ N TWTLVPRP+  N
Sbjct: 784  YALAHHQPTALLTALHVASDPKGFKSAMKHPQWLAAMEDELSALRNNHTWTLVPRPSAPN 843

Query: 923  IVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVT 982
            IVGSKWVFR K+  DG++ER KARLVA+G+TQ+PG DY+ TFSPVVKATT+R++LS+AV 
Sbjct: 844  IVGSKWVFRTKHKSDGTIERLKARLVAQGFTQIPGFDYSLTFSPVVKATTIRLILSLAVL 903

Query: 983  NKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQR 1042
            N W L QLDVKNAFL+G L E V+MEQPPG++DPRFPTHVC L KALYGLKQAPRAWFQR
Sbjct: 904  NGWPLHQLDVKNAFLHGHLTEIVYMEQPPGFVDPRFPTHVCRLNKALYGLKQAPRAWFQR 963

Query: 1043 FSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFA 1102
             SSFL+  GF CSRAD SLF F++    +YLL+YVDDII+TG++   +  F  +L++EFA
Sbjct: 964  LSSFLMRSGFICSRADPSLFFFYRGRITLYLLVYVDDIILTGSDPPFLTQFIARLNAEFA 1023

Query: 1103 TKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGS 1162
             K LG L YFLGLE + T DGLF+ Q KYA D+L+RA +L++KPV TP+    HL +DG 
Sbjct: 1024 IKYLGKLGYFLGLEITYTADGLFLGQAKYAHDLLSRAMMLEAKPVSTPLAAGFHLVSDGV 1083

Query: 1163 PFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHF 1222
             +SDPT YRSLVGALQYLTITRPD++YAVN+VSQFL APT DHF AVKRILRYV GT HF
Sbjct: 1084 AYSDPTQYRSLVGALQYLTITRPDLSYAVNTVSQFLQAPTIDHFQAVKRILRYVCGTQHF 1143

Query: 1223 GLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCES 1282
            GLTFR S  P+ L  YSDADWA C DTRRST GY+I+LG+NL+SWSAKKQPTV+RSSCES
Sbjct: 1144 GLTFRSSPSPAVL-GYSDADWARCTDTRRSTYGYAIFLGDNLLSWSAKKQPTVARSSCES 1203

Query: 1283 EYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYH 1342
            EYRA+A TA+EL+W+ +LL +L+V +S  PLLL DN+SA+F++ NPV+HKRAKH++LD H
Sbjct: 1204 EYRAMANTASELVWLLNLLRELRVGLSATPLLLSDNQSALFMAQNPVAHKRAKHIDLDCH 1263

Query: 1343 FLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLRGG 1372
            F+RELV +G+L  ++VP+ LQ+ADIFTK++ RPLFE FRSKL V  NPTLSL GG
Sbjct: 1264 FIRELVASGRLAVRHVPTSLQLADIFTKALPRPLFELFRSKLRVGLNPTLSLTGG 1290

BLAST of CmoCh09G001680 vs. TrEMBL
Match: A0A151SGU3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan GN=KK1_000231 PE=4 SV=1)

HSP 1 Score: 1194.1 bits (3088), Expect = 0.0e+00
Identity = 622/1132 (54.95%), Postives = 810/1132 (71.55%), Query Frame = 1

Query: 248  NSSNRGRTHSSQGRRP---PHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFNTSCSIA 307
            N  +R R ++S GRR    P CQICR++GHYA++C   + R   S A+LA+AF  SCS+ 
Sbjct: 67   NGGSRQRCNNS-GRRNSYVPRCQICREQGHYANKCLVHWDRSSES-ANLAQAFVASCSLD 126

Query: 308  GPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHL 367
              + +DW++DTGA++HMT   S L  S+NY G D V V NG SL ITH G+LS    + L
Sbjct: 127  TSNRSDWYMDTGATSHMTPSSSQLTNSQNYNGTDHVFVSNGTSLNITHVGSLSLSRTVPL 186

Query: 368  LDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLITIQNRQTGRVVATGKRDGGLYVLERG 427
             DVLVVPHLTKNL+S+SKLT D      F +++  IQNR+TGRV+A G+ D GLYV+++G
Sbjct: 187  SDVLVVPHLTKNLVSVSKLTRDNHAKAIFVDDIFVIQNRKTGRVLARGRCDQGLYVMDQG 246

Query: 428  NSAFISALRNKSL-HASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLA 487
              A ++   + SL  AS++LWH+RLGHVN  +I  LN++G+L+++S+LP P  C TCQ+A
Sbjct: 247  PQALLTT--SSSLPRASFELWHSRLGHVNFDVINKLNQQGYLNVSSILPKPVYCTTCQMA 306

Query: 488  KSHRLPYSRNERRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKS 547
            KS RL +  N +R+S VLDLIHCDLWGPSPV   +G+ Y+VIF+DD+SRFTWFY L+ KS
Sbjct: 307  KSKRLFFYDNNKRASTVLDLIHCDLWGPSPVAFVAGYSYFVIFVDDFSRFTWFYLLRHKS 366

Query: 548  DFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYTPAQNG 607
             F+D+ ++F+ FVENQ+S  IKVFQSD GTEFT+   +    +SG+ H+ SCP+T AQNG
Sbjct: 367  YFYDVLVRFKVFVENQFSQFIKVFQSDNGTEFTNNKVQDLFASSGVFHRFSCPHTQAQNG 426

Query: 608  RAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTP 667
            R E+KHRHV E GLA+L+ SH+ + +W D+FS A YIINR+P+ +L G  PF LL+   P
Sbjct: 427  RVEQKHRHVLEIGLAMLYQSHVPTSYWDDSFSFAVYIINRVPSQVLSGHIPFTLLFQVAP 486

Query: 668  HYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLGYSPAHKGFRCLDPTTTKLYITCHAQ 727
             Y NFHPFGCR++P L  YM NK SPRS PCIFLGYS  HKGF+CLD TT+++Y++ HAQ
Sbjct: 487  TYANFHPFGCRLFPCLHPYMKNKFSPRSSPCIFLGYSSHHKGFKCLDLTTSRIYVSRHAQ 546

Query: 728  FDETHFPAIPSSQTQPLSSIP--ISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDIC 787
            FD+  FP   S    P SSI   +S+F EP      SS   +SS  T  P  ++  C  C
Sbjct: 547  FDKICFPFAGS----PSSSIDLMVSSFYEPITGFKSSSMSASSSLPTRPPPVTTLSCPSC 606

Query: 788  SDLVDESVQVDTSLTGSTLPP-STSNSTSIEPPVDFSSLGTHPMI--------------- 847
                   V +D +L     PP + ++S  + PP   S   T P++               
Sbjct: 607  -------VSLDAALAPHPAPPVAPASSEPVSPPRTPSPASTSPIVLPASSDASIQPAPVA 666

Query: 848  ----TRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRA 907
                TR++ GIF+      L     + LL+AL  + +PKGFK   K+P W+AAM++E+ A
Sbjct: 667  VRMQTRSQNGIFRPNLRYALAHHQPTTLLTALHGAADPKGFKFVMKHPQWLAAMEDELFA 726

Query: 908  LQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFS 967
            L  N TWTLVPRP+  NIVGSKWVFR K+  DG++ER KARLVA+G+TQ+PG DY+ TFS
Sbjct: 727  LHNNHTWTLVPRPSAPNIVGSKWVFRTKHKSDGTIERLKARLVAQGFTQIPGFDYSLTFS 786

Query: 968  PVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLL 1027
            PVVKATT+R++LS+AV N W L QLDVKNAFL+G L E V+MEQPPG++DPRF THVC L
Sbjct: 787  PVVKATTIRLILSLAVLNGWPLHQLDVKNAFLHGHLTETVYMEQPPGFVDPRFQTHVCRL 846

Query: 1028 KKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGN 1087
             KALYGLKQAPRAWFQR SSFL+  GF CSRAD SLF F++    +YLL+YVDDII+TG+
Sbjct: 847  NKALYGLKQAPRAWFQRLSSFLMRSGFICSRADPSLFFFYRGRITLYLLVYVDDIILTGS 906

Query: 1088 NSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSK 1147
            +   +  F  +L++EFA K LG L YFLGLE +   DGLF+ Q KYA D+L+RA +L++K
Sbjct: 907  DPLFLTQFIARLNAEFAIKYLGKLGYFLGLEITYIADGLFLGQAKYAHDLLSRAMMLEAK 966

Query: 1148 PVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADH 1207
            PV TP+    HL +DG  +SDPT YRSLVGALQY+TITRPD++YAVN+VSQFL APT DH
Sbjct: 967  PVSTPLAAGFHLVSDGVTYSDPTQYRSLVGALQYVTITRPDLSYAVNTVSQFLQAPTIDH 1026

Query: 1208 FLAVKRILRYVKGTLHFGLTFRPSTVPS-TLVAYSDADWAGCPDTRRSTSGYSIYLGNNL 1267
            F AVKRILRYV GT HFGLTF  S  PS  ++ YSDADWA C DTRRST GY+I+LG+NL
Sbjct: 1027 FQAVKRILRYVCGTQHFGLTFCSS--PSLAVLGYSDADWARCTDTRRSTYGYAIFLGDNL 1086

Query: 1268 VSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFL 1327
            +S SAKKQPTV+RSSCESEYRA+A  A+EL+W+ +LL +L+V +S  PLLL DN+SA+F+
Sbjct: 1087 LSRSAKKQPTVARSSCESEYRAMANIASELVWLLNLLRELRVGLSATPLLLNDNQSAVFM 1146

Query: 1328 SSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPL 1351
            + NP++HK A+H+EL+ HF+RELV +G+L  ++VP+ LQ+ADIF K++ RP+
Sbjct: 1147 AQNPIAHKHAEHIELNCHFIRELVASGRLAVRHVPTSLQLADIFIKALPRPI 1181

BLAST of CmoCh09G001680 vs. TrEMBL
Match: A5B6R5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036280 PE=4 SV=1)

HSP 1 Score: 1132.5 bits (2928), Expect = 0.0e+00
Identity = 567/798 (71.05%), Postives = 664/798 (83.21%), Query Frame = 1

Query: 593  LSCPYTPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGK 652
            +SCPYTP+QNGRAERKHRHVTETGLALLFHSH+  ++WVDAFSTA YIINRLP P+LGG 
Sbjct: 1    MSCPYTPSQNGRAERKHRHVTETGLALLFHSHVPPQYWVDAFSTATYIINRLPLPVLGGL 60

Query: 653  SPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLGYSPAHKGFRCLDPT 712
            SPFE+L+G +P+Y+NFHPFGCRVYP LRDY P+K SPRS+PCIFLGYS +HKGFRC D T
Sbjct: 61   SPFEVLFGKSPNYENFHPFGCRVYPCLRDYAPHKFSPRSLPCIFLGYSSSHKGFRCFDTT 120

Query: 713  TTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQTPRSS 772
            T++ YIT HA+FDE  FP   +S    ++ I +SNF EP    ++ SP T+S   T    
Sbjct: 121  TSRTYITRHARFDEHFFPFSNTSSATSIADIGLSNFFEPC--ALEPSPSTSSPTTTRVPP 180

Query: 773  SSPCDICSD-LVDESVQVDTSLTGST-----LPPSTSNSTSIEP---PVD------FSSL 832
            S PC  C+D    E +QV +S   ST     + P  +++T++ P   P+D       ++ 
Sbjct: 181  SPPCHFCADDFAVEPLQVSSSAPESTSSSAAVSPVPASATTLVPFAAPMDPIHTTTSAAP 240

Query: 833  GTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEI 892
             +HPMITRAK+GIFK RHPA+L  + SS L+ ALLA++EPKGFKSAAKNPAW+AAMD++I
Sbjct: 241  ASHPMITRAKSGIFKPRHPAHLSFVQSSPLIHALLATSEPKGFKSAAKNPAWLAAMDDKI 300

Query: 893  RALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDT 952
            +ALQ N TW LVPRP+NTNIVGSKWVFR K+L  GS+ERFKARLVAKGYTQ+PGLDY DT
Sbjct: 301  KALQTNHTWDLVPRPSNTNIVGSKWVFRTKFLSYGSIERFKARLVAKGYTQLPGLDYKDT 360

Query: 953  FSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVC 1012
            FSPVVKA+TVRVVLS+AV++KW LRQLDVKNAFLNG L E V+MEQP GY+DPR P HVC
Sbjct: 361  FSPVVKASTVRVVLSLAVSHKWPLRQLDVKNAFLNGILHETVYMEQPLGYVDPRHPLHVC 420

Query: 1013 LLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVT 1072
             LKKALYGLKQAPRAWFQRFSSFLL LGF CSRADTSLFVF ++ ++IYLLLYVDDII+T
Sbjct: 421  KLKKALYGLKQAPRAWFQRFSSFLLKLGFFCSRADTSLFVFTKKDDLIYLLLYVDDIILT 480

Query: 1073 GNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLD 1132
            GNN +LI+ F  +LHSEFA KDLG LSYFLGLE S  PDG F+SQ+KYA DIL RAQLLD
Sbjct: 481  GNNPALINRFISQLHSEFAVKDLGPLSYFLGLEVSYIPDGFFLSQVKYATDILARAQLLD 540

Query: 1133 SKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTA 1192
            SKPV TPM+VSQ L+++G+PF+DPTLYRSLVGALQYLTITRP++A+++NSVSQFLHAPT 
Sbjct: 541  SKPVPTPMIVSQRLSSEGTPFADPTLYRSLVGALQYLTITRPNLAHSINSVSQFLHAPTE 600

Query: 1193 DHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNN 1252
             HF AVKRILRYV+GTLHFGL F  S     LVAYSDADWAGCPDTRRSTSGYSI+LGNN
Sbjct: 601  VHFQAVKRILRYVQGTLHFGLKF-TSCSSMGLVAYSDADWAGCPDTRRSTSGYSIFLGNN 660

Query: 1253 LVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIF 1312
            LVSWSAKKQPTVSRSSCESEYRALA TAA++LW+THLL DL+V ++ +PLLLCDNKSAIF
Sbjct: 661  LVSWSAKKQPTVSRSSCESEYRALALTAAKVLWLTHLLRDLRVTLTHRPLLLCDNKSAIF 720

Query: 1313 LSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSK 1372
            LSSNPVSHKRAKHV+LDYHFLREL++AG LR Q++PSHLQ+AD+FTKS+SR L+ FFRSK
Sbjct: 721  LSSNPVSHKRAKHVDLDYHFLRELIVAGTLRIQHIPSHLQLADVFTKSVSRDLYVFFRSK 780

Query: 1373 LYVRSNPTLSLRGGVKDS 1376
            L V  NPTLSLRG V+DS
Sbjct: 781  LRVCVNPTLSLRGAVEDS 795

BLAST of CmoCh09G001680 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 423.7 bits (1088), Expect = 4.3e-118
Identity = 220/478 (46.03%), Postives = 301/478 (62.97%), Query Frame = 1

Query: 848  LSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIK 907
            L  +  + EP  +  A +   W  AMD+EI A++   TW +   P N   +G KWV++IK
Sbjct: 77   LVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIK 136

Query: 908  YLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWHLRQLDVK 967
            Y  DG++ER+KARLVAKGYTQ  G+D+ +TFSPV K T+V+++L+I+    + L QLD+ 
Sbjct: 137  YNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDIS 196

Query: 968  NAFLNGTLIERVHMEQPPGYI----DPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLT 1027
            NAFLNG L E ++M+ PPGY     D   P  VC LKK++YGLKQA R WF +FS  L+ 
Sbjct: 197  NAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIG 256

Query: 1028 LGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSL 1087
             GF  S +D + F+    +  + +L+YVDDII+  NN + +D    +L S F  +DLG L
Sbjct: 257  FGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPL 316

Query: 1088 SYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPT 1147
             YFLGLE + +  G+ I Q KYA D+L    LL  KP   PM  S   +A  G  F D  
Sbjct: 317  KYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAK 376

Query: 1148 LYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRP 1207
             YR L+G L YL ITR DI++AVN +SQF  AP   H  AV +IL Y+KGT+  GL F  
Sbjct: 377  AYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL-FYS 436

Query: 1208 STVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALA 1267
            S     L  +SDA +  C DTRRST+GY ++LG +L+SW +KKQ  VS+SS E+EYRAL+
Sbjct: 437  SQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALS 496

Query: 1268 TTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRE 1321
                E++W+     +L++P+SK  LL CDN +AI +++N V H+R KH+E D H +RE
Sbjct: 497  FATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

BLAST of CmoCh09G001680 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-64
Identity = 121/226 (53.54%), Postives = 165/226 (73.01%), Query Frame = 1

Query: 1045 IYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLK 1104
            +YLLLYVDDI++TG++++L++    +L S F+ KDLG + YFLG++    P GLF+SQ K
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 1105 YARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYA 1164
            YA  IL  A +LD KP+ TP+ +  + +   + + DP+ +RS+VGALQYLT+TRPDI+YA
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 120

Query: 1165 VNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTR 1224
            VN V Q +H PT   F  +KR+LRYVKGT+  GL    ++    + A+ D+DWAGC  TR
Sbjct: 121  VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNS-KLNVQAFCDSDWAGCTSTR 180

Query: 1225 RSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESEYRALATTAAELLW 1271
            RST+G+  +LG N++SWSAK+QPTVSRSS E+EYRALA TAAEL W
Sbjct: 181  RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmoCh09G001680 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 119.8 bits (299), Expect = 1.3e-26
Identity = 61/133 (45.86%), Postives = 83/133 (62.41%), Query Frame = 1

Query: 822 MITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQ 881
           M+TR+KAGI K     +L I  +           EPK    A K+P W  AM EE+ AL 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTT--------IKKEPKSVIFALKDPGWCQAMQEELDALS 60

Query: 882 QNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPV 941
           +N TW LVP P N NI+G KWVF+ K   DG+++R KARLVAKG+ Q  G+ + +T+SPV
Sbjct: 61  RNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPV 120

Query: 942 VKATTVRVVLSIA 955
           V+  T+R +L++A
Sbjct: 121 VRTATIRTILNVA 125

BLAST of CmoCh09G001680 vs. TAIR10
Match: ATMG00240.1 (ATMG00240.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 82.0 bits (201), Expect = 3.1e-15
Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 1

Query: 1153 YLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAY 1212
            YLTITRPD+ +AVN +SQF  A       AV ++L YVKGT+  GL F  +T    L A+
Sbjct: 2    YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGL-FYSATSDLQLKAF 61

Query: 1213 SDADWAGCPDTRRSTSGY 1231
            +D+DWA CPDTRRS +G+
Sbjct: 62   ADSDWASCPDTRRSVTGF 78

BLAST of CmoCh09G001680 vs. TAIR10
Match: AT1G34070.1 (AT1G34070.1 Retrotransposon gag protein (InterPro:IPR005162))

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-12
Identity = 70/250 (28.00%), Postives = 109/250 (43.60%), Query Frame = 1

Query: 19  ITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEPETSSTLNPKYLAWRAADQ 78
           + + +  SNY  W+   L    S D++G++DGT++P            N   + W+  D 
Sbjct: 22  VMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTLLPT-----------NANDVNWQKRDG 81

Query: 79  RLLCLLLSSLT-EEAMAVVVGLPTARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKP 138
            +   L  +LT ++     V   T+RD+WL ++  F +   AR LRL  +L+    G   
Sbjct: 82  IVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDMR 141

Query: 139 VAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVS 198
           VA+Y R  KK+ D L  +  PV D + V + L GL  +F             P F D  +
Sbjct: 142 VADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAAT 201

Query: 199 K-AESFELFQLSLE--------SSSSTPTAFT----VTNRGRTHGSHPASFTNQRGRSYS 255
              E  +  + +++        SSSST  A +    VTN  R+ G       NQ G    
Sbjct: 202 MLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQRSGG-------NQMGYRGR 253

BLAST of CmoCh09G001680 vs. NCBI nr
Match: gi|147794811|emb|CAN78022.1| (hypothetical protein VITISV_015518 [Vitis vinifera])

HSP 1 Score: 1986.1 bits (5144), Expect = 0.0e+00
Identity = 1008/1189 (84.78%), Postives = 1055/1189 (88.73%), Query Frame = 1

Query: 1    MASESSYHLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPPRFEP 60
            MASESS HLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQD+L YVDGT+VPPPRFEP
Sbjct: 1    MASESS-HLLPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLAYVDGTLVPPPRFEP 60

Query: 61   ETSSTLNPKYLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKAR 120
            ETS+TL+ KYLAW+AADQRLLCLLLSSLTEEA+AVVVGL TAR+VWLALE TFSH SKAR
Sbjct: 61   ETSTTLSTKYLAWKAADQRLLCLLLSSLTEEAIAVVVGLSTAREVWLALENTFSHHSKAR 120

Query: 121  ELRLKDDLQLMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFS 180
            ELRLKDDLQLMK GTKPVAEYAR FK +CDQLHAIGRPVED DKVHWFLRG    F  F 
Sbjct: 121  ELRLKDDLQLMKCGTKPVAEYARTFKTLCDQLHAIGRPVEDTDKVHWFLRGTRPRFFQF- 180

Query: 181  TAQMALTSIPCFADLVSKAESFELFQLSLESSSSTPTAFTVTNRGRT--HGSHPASFTNQ 240
                                 F     SLESS  T  AFT TNR RT  HG+  A   NQ
Sbjct: 181  ---------------------FYSSNXSLESSEPTTAAFTATNRSRTTSHGTPFAFRNNQ 240

Query: 241  RGRSYSHKNNSSNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFN 300
            RGRS+SH NNSSNRGRT+S  GRRPP CQICR EGHYADRCNQRY R DSS AHLAEAFN
Sbjct: 241  RGRSHSHNNNSSNRGRTYSGHGRRPPRCQICRIEGHYADRCNQRYARTDSS-AHLAEAFN 300

Query: 301  TSCSIAGPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSP 360
            TSCS++GP+ ADWFLDTGASAHMT DPS LDQSKNY GKDSVIVGNGASLPITHTGTLSP
Sbjct: 301  TSCSLSGPEAADWFLDTGASAHMTTDPSXLDQSKNYMGKDSVIVGNGASLPITHTGTLSP 360

Query: 361  VPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLITIQNRQTGRVVATGKRDGGL 420
            VPNIHLLDVLVV HLTKNLLSISKLTSDFPLSVTFTNNL T+QNRQTGR VATGKRDGGL
Sbjct: 361  VPNIHLLDVLVVXHLTKNLLSISKLTSDFPLSVTFTNNLFTVQNRQTGRXVATGKRDGGL 420

Query: 421  YVLERGNSAFISALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCN 480
            YVLERGNSAFIS L+NKSL ASYDLWHARLGH              LSLTSLLPSPSLC+
Sbjct: 421  YVLERGNSAFISVLKNKSLRASYDLWHARLGH--------------LSLTSLLPSPSLCS 480

Query: 481  TCQLAKSHRLPYSRNERRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYP 540
            TCQLAK+HRLPYSRNE RSSHVLDLIHCDLWGPSP+KSNSGFLYYVIFIDDYSRFTW YP
Sbjct: 481  TCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSGFLYYVIFIDDYSRFTWLYP 540

Query: 541  LKFKSDFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYT 600
            LKFKSDFFDIFLQFQKFVENQ+S+RIKVFQSDGG EFT+TCFK HLR SGIHHQLSCPYT
Sbjct: 541  LKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGAEFTNTCFKAHLRTSGIHHQLSCPYT 600

Query: 601  PAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELL 660
            PAQNGRAERKHRHVTETGLALLFHSHLS RFWVDAFSTA YIINRLPTPLLGGKSPFELL
Sbjct: 601  PAQNGRAERKHRHVTETGLALLFHSHLSPRFWVDAFSTATYIINRLPTPLLGGKSPFELL 660

Query: 661  YGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLGYSPAHKGFRCLDPTTTKLYI 720
            YG +PHY+NFHPFGCRVYP LRDYMPNKLSPRSIPCIFLGYSP+HKGFRCLDPTT++LYI
Sbjct: 661  YGXSPHYENFHPFGCRVYPCLRDYMPNKLSPRSIPCIFLGYSPSHKGFRCLDPTTSRLYI 720

Query: 721  TCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPC 780
            T HAQFDETHFP +PSSQ QPLSS+ ISNFLEP  H ID SPP+  SP +  PRS+SSPC
Sbjct: 721  TRHAQFDETHFPTVPSSQAQPLSSLHISNFLEPRLHHIDPSPPSPPSPSSHIPRSNSSPC 780

Query: 781  DICSDLVDESVQVDTSLTGSTLPPSTSNSTSIEPPVDFS-SLGTHPMITRAKAGIFKTRH 840
            +ICSDLVDESVQVDTSL GS+LPP  S+  SIE   D S SLG+HPMITRAKAGIFKTRH
Sbjct: 781  NICSDLVDESVQVDTSLAGSSLPPLASSPHSIEHAADSSSSLGSHPMITRAKAGIFKTRH 840

Query: 841  PANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANT 900
            PANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NT
Sbjct: 841  PANLGVLGSSGLLXALLASTEPKGFKSAAKNPAWLAAMDEEVQALQQNGTWILVPRPVNT 900

Query: 901  NIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAV 960
            NIVGSKWVFR KYLPDGSVER KARLVAKGYT VPGLDYTDTFSPVVKATTVRVVLS+AV
Sbjct: 901  NIVGSKWVFRTKYLPDGSVERLKARLVAKGYTXVPGLDYTDTFSPVVKATTVRVVLSLAV 960

Query: 961  TNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQ 1020
            TNKW LRQLDVKNAFLNGTL E V+MEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQ
Sbjct: 961  TNKWPLRQLDVKNAFLNGTLTEHVYMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQ 1020

Query: 1021 RFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEF 1080
            RFSSFLLTLGFSCSRADTSLFVFHQQS++IYLLLYVDDIIVTGNN SL+DSFTRKLHSEF
Sbjct: 1021 RFSSFLLTLGFSCSRADTSLFVFHQQSSLIYLLLYVDDIIVTGNNPSLLDSFTRKLHSEF 1080

Query: 1081 ATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADG 1140
            ATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  G
Sbjct: 1081 ATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTVAG 1140

Query: 1141 SPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVK 1185
            SPFS+PTLYRSLVGALQYLTI RPDIA+AVNSVSQFLHAPT DHFLAVK
Sbjct: 1141 SPFSNPTLYRSLVGALQYLTIXRPDIAHAVNSVSQFLHAPTIDHFLAVK 1151

BLAST of CmoCh09G001680 vs. NCBI nr
Match: gi|147843564|emb|CAN79884.1| (hypothetical protein VITISV_002539 [Vitis vinifera])

HSP 1 Score: 1780.0 bits (4609), Expect = 0.0e+00
Identity = 923/1386 (66.59%), Postives = 1077/1386 (77.71%), Query Frame = 1

Query: 12   FNTLIHMITIKLSSSNYLLWKSQLLPLLESQDMLGYVDGTMVPPP--RFEPETSSTLNPK 71
            FNT+IHMITIKLSS+NYLLW++QLLPLL+ Q++L +VDG++ PPP       +SS  NP+
Sbjct: 8    FNTMIHMITIKLSSTNYLLWRNQLLPLLQCQNLLSHVDGSVAPPPITIAVDSSSSQPNPQ 67

Query: 72   YLAWRAADQRLLCLLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKARELRLKDDLQ 131
            Y+AW+  DQRLL LL SSLTEEAM  V+GL TARDVWLALE +FSH SK  ELR+KDDLQ
Sbjct: 68   YVAWQLQDQRLLSLLFSSLTEEAMTEVLGLTTARDVWLALENSFSHISKTCELRIKDDLQ 127

Query: 132  LMKRGTKPVAEYARAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSI 191
            L+KRGT+ V EY+R+FK +CDQL A+GR V+D DKVHW+LRGLG +F+ FSTAQM+LT +
Sbjct: 128  LIKRGTRSVTEYSRSFKALCDQLTAMGRSVDDTDKVHWYLRGLGADFANFSTAQMSLTPL 187

Query: 192  PCFADLVSKAESFELFQLSLESSSSTPTAFTVTNRGRTHGSHPASFTNQRGRSYSHKNNS 251
            P F DLV KAESFE+FQ SL SS        V +  R     P ++T             
Sbjct: 188  PVFKDLVPKAESFEIFQKSLGSSF---PFLQVPSFSRWLPWRPWTWTF------------ 247

Query: 252  SNRGRTHSSQGRRPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFNTSCSIAGPDTA 311
                          P CQIC+ EGH ADRC  RY R + + A LAEAF T+CS++    +
Sbjct: 248  --------------PRCQICKTEGHTADRCRSRYDRAEPT-AQLAEAFTTTCSLSNGSES 307

Query: 312  DWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLV 371
            DWF DTGASAHMT DPS LD+ + Y GKD VIVGNGASLPITHTGTLS   N+ LLDVLV
Sbjct: 308  DWFTDTGASAHMTPDPSQLDKVEPYHGKDCVIVGNGASLPITHTGTLSSSSNLQLLDVLV 367

Query: 372  VPHLTKNLLSISKLTSDFPLSVTFTNNLITIQNRQTGRVVATGKRDGGLYVLERGNSAFI 431
            VP LTKNLLSISKLTSDFPLSVTF+++   +QNR TG  VA GKR GGLYVLERG+SAF 
Sbjct: 368  VPRLTKNLLSISKLTSDFPLSVTFSHDNFVVQNRITGMAVAKGKRAGGLYVLERGHSAFA 427

Query: 432  SALRNKSLHASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLP 491
            S LRNK+LHAS++LWHARLGHVNHSI+  LN+KG L LTSLLP+PSLC+TCQLAKSHRLP
Sbjct: 428  SVLRNKNLHASFELWHARLGHVNHSILSLLNKKGQLFLTSLLPTPSLCSTCQLAKSHRLP 487

Query: 492  YSRNERRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIF 551
            +S N  RS+ VL L+HCD+WG +PVKSN GF YYV+FIDDYSRFTW YPLK KSDFFDIF
Sbjct: 488  FSSNTTRSNVVLGLVHCDIWGLAPVKSNLGFNYYVLFIDDYSRFTWLYPLKLKSDFFDIF 547

Query: 552  LQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYTPAQNGRAERKH 611
            LQFQK VENQYS++IK+FQSDGG EFTS  F++HL+  GIHHQ+SCPYTP+QNGRAERKH
Sbjct: 548  LQFQKLVENQYSTKIKIFQSDGGAEFTSNRFQSHLQQFGIHHQMSCPYTPSQNGRAERKH 607

Query: 612  RHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFH 671
            RHVTETGLALLFHSH+  R+WVDAFSTA YIINRLP P+LGG SPFE+L+G +P+Y+NFH
Sbjct: 608  RHVTETGLALLFHSHVPPRYWVDAFSTATYIINRLPLPVLGGLSPFEVLFGKSPNYENFH 667

Query: 672  PFGCRVYPYLRDYMPNKLSPRSIPCIFLGYSPAHKGFRCLDPTTTKLYITCHAQFDETHF 731
            PFGCRVYP LRDY P+K SPRS+PCIFLGYS +HKGFRC D TT++ YIT HA+FDE  F
Sbjct: 668  PFGCRVYPCLRDYAPHKFSPRSLPCIFLGYSSSHKGFRCFDTTTSRTYITRHARFDEHFF 727

Query: 732  PAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQTPRSSSSP-CDICSDLVDESVQ 791
            P   +S    ++ I +SNF EP    ++ S P+TSSP T R   SP C  C+D       
Sbjct: 728  PFSNTSSATSIADIGLSNFFEP--CALEPS-PSTSSPTTTRVPPSPSCHFCAD----DFA 787

Query: 792  VDTSLTGSTLPPSTSNSTSIEP-PVDFSSL------------------GTHPMITRAKAG 851
            V+     S+ P STS+S ++ P P   ++L                   +HPMITRAK+G
Sbjct: 788  VEPLQVSSSAPESTSSSAAVSPVPASMTTLVPFAAPMDPIHTTTSATPASHPMITRAKSG 847

Query: 852  IFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLV 911
            IFK RHP++L  + SS L+ ALLA++EPKGFKSAAKNPAW+AAMD+EI+ LQ N TW LV
Sbjct: 848  IFKPRHPSHLSFVQSSPLIHALLATSEPKGFKSAAKNPAWLAAMDDEIKVLQTNHTWDLV 907

Query: 912  PRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRV 971
            PRP+NTNIVGSKWVFR K+L DGS+ERFKARLVAKGYTQ+P             A+TVRV
Sbjct: 908  PRPSNTNIVGSKWVFRTKFLSDGSIERFKARLVAKGYTQLP-------------ASTVRV 967

Query: 972  VLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGLKQA 1031
            VLS+ V++KW L QLDVKNAFLNG L E V+MEQPPGY+DPR P HVC LKKALY LKQA
Sbjct: 968  VLSLVVSHKWPLCQLDVKNAFLNGILHETVYMEQPPGYVDPRHPLHVCKLKKALYDLKQA 1027

Query: 1032 PRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTR 1091
            PRAWFQRFSSFLL LGF CSRA TSLFVF  + ++IYLLLYVDDII+TGNN +LI+ F  
Sbjct: 1028 PRAWFQRFSSFLLKLGFFCSRAYTSLFVFTMKDDLIYLLLYVDDIILTGNNPTLINRFIS 1087

Query: 1092 KLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQ 1151
            +LHSEFA KDLG LSYFLGLE S  PDG F+SQ+KYA DIL RAQLLDSKPV TPM+VSQ
Sbjct: 1088 QLHSEFAVKDLGPLSYFLGLEVSYIPDGFFLSQVKYATDILARAQLLDSKPVPTPMIVSQ 1147

Query: 1152 HLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRY 1211
             L+++G+PF+DPTLYRSLVGALQYLTIT PD+A++VNSVSQFLHAPT  HF AVKRILRY
Sbjct: 1148 RLSSEGTPFADPTLYRSLVGALQYLTITCPDLAHSVNSVSQFLHAPTEVHFQAVKRILRY 1207

Query: 1212 VKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTV 1271
            V+GTLHFGL F  S     LVAYSD DWAGCPDTRRSTSGY            AKKQPTV
Sbjct: 1208 VQGTLHFGLKF-TSCSSMGLVAYSDEDWAGCPDTRRSTSGY------------AKKQPTV 1267

Query: 1272 SRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAK 1331
            SRSSCESEYRALA TAAE+LW+THLL DL+V ++ +PLLLCDNKSAIFLSSNPVSHKRAK
Sbjct: 1268 SRSSCESEYRALALTAAEVLWLTHLLRDLRVTLTHRPLLLCDNKSAIFLSSNPVSHKRAK 1327

Query: 1332 HVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLR 1376
            HV+LDYHFLREL++AG LR Q++PSHLQ+AD+FTKS+SR L+ FFRSKL V  NPTLSLR
Sbjct: 1328 HVDLDYHFLRELIVAGTLRIQHIPSHLQLADVFTKSVSRDLYVFFRSKLRVCVNPTLSLR 1330

BLAST of CmoCh09G001680 vs. NCBI nr
Match: gi|1012353426|gb|KYP64614.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan])

HSP 1 Score: 1408.3 bits (3644), Expect = 0.0e+00
Identity = 735/1315 (55.89%), Postives = 944/1315 (71.79%), Query Frame = 1

Query: 83   LLLSSLTEEAMAVVVGLPTARDVWLALETTFSHQSKARELRLKDDLQLMKRGTKPVAEYA 142
            LLLSSLTEEA++  +   TARD+W AL T ++ +SKARELRL+D+LQLM+RG+  V EY 
Sbjct: 4    LLLSSLTEEALSETLSADTARDIWNALHTAYASRSKARELRLRDELQLMRRGSISVTEYG 63

Query: 143  RAFKKICDQLHAIGRPVEDIDKVHWFLRGLGTEFSAFSTAQMALTSIPCFADLVSKAESF 202
            + F+ ICDQL AIG P+ + DKVHWFLRGLG  ++ FST Q+    +P F D++S     
Sbjct: 64   KKFRTICDQLAAIGAPIANDDKVHWFLRGLGPSYANFSTGQLDQVPLPRFTDILSA---- 123

Query: 203  ELFQLSLESSSSTPTAFTVTNRGRTH-GSHPASFTNQRGRSYSHKNNSSNRGRTHSSQGR 262
              F  + +  SS   +    NRG ++ GS+  +  N  G S   +NNS  R         
Sbjct: 124  --FYANNQPRSSGNQSSRSGNRGHSNDGSNGGNRGNSNGGSRQRRNNSGRRNSY------ 183

Query: 263  RPPHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFNTSCSIAGPDTADWFLDTGASAHM 322
              P CQICR++GHYA++C  R+ R   S A+LA+AF  SCS+   + +DW++DTGA++HM
Sbjct: 184  -VPRCQICREQGHYANKCPVRWDRSSES-ANLAQAFAASCSVDTSNQSDWYMDTGATSHM 243

Query: 323  TADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHLLDVLVVPHLTKNLLSIS 382
            T   S L  S+NY G D V VGNG SL ITH G+ S    + L DVLVVP+LTKNL+S+S
Sbjct: 244  TPSSSQLTDSQNYNGTDRVFVGNGTSLNITHVGSRSLSHIVPLSDVLVVPNLTKNLVSVS 303

Query: 383  KLTSDFPLSVTFTNNLITIQNRQTGRVVATGKRDGGLYVLERGNSAFISALRNKSL-HAS 442
            KLT D      F ++   IQNR+TGRV+A G+ D GLYV+++G  A ++   + SL  AS
Sbjct: 304  KLTRDNHAKAIFVDDSFVIQNRKTGRVLARGRCDQGLYVMDQGPQALLTT--SSSLPRAS 363

Query: 443  YDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLAKSHRLPYSRNERRSSHV 502
            ++LWH+RLGHVN  +I  LN++G+L+++S+LP P  C TCQ+AKS RL +  N +R+S V
Sbjct: 364  FELWHSRLGHVNFDVINKLNKQGYLNVSSILPKPICCTTCQMAKSKRLVFYDNNKRASAV 423

Query: 503  LDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKSDFFDIFLQFQKFVENQY 562
            LDLIHCDLWGPSPV S +G+ Y+VIF+DD+SRFTWFYPL+ KSDF+D+ ++F+ FVENQ+
Sbjct: 424  LDLIHCDLWGPSPVASVAGYSYFVIFVDDFSRFTWFYPLRHKSDFYDVLVRFKVFVENQF 483

Query: 563  SSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYTPAQNGRAERKHRHVTETGLALL 622
            S  IKVFQSD GTEFT+   +    +SG+ H+ SCP+T AQNGR ERKHRHV E GLA+L
Sbjct: 484  SRFIKVFQSDNGTEFTNNKVQDLFASSGVLHRFSCPHTQAQNGRVERKHRHVLEIGLAML 543

Query: 623  FHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTPHYDNFHPFGCRVYPYLR 682
            + SH+ +R+WVDAFS+A YIINR+P+ +L G+ PF LL+   P Y NFHPFGCRV+P LR
Sbjct: 544  YQSHVPTRYWVDAFSSAVYIINRVPSQVLSGQIPFTLLFQVAPTYANFHPFGCRVFPCLR 603

Query: 683  DYMPNKLSPRSIPCIFLGYSPAHKGFRCLDPTTTKLYITCHAQFDETHFPAIPSSQTQPL 742
             YM NK SPRS PCIFLGYS  HKGF+CLD TT+++Y++ HAQFDET FP   S    P 
Sbjct: 604  PYMKNKFSPRSSPCIFLGYSSHHKGFKCLDLTTSRIYVSRHAQFDETCFPFAGS----PS 663

Query: 743  SSIP--ISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDICSDLVDESVQVDTSLTGS 802
            SSI   +S+F EP      SS   +SS  T  P  ++  C  C       V +D +L   
Sbjct: 664  SSIDLMVSSFYEPITGFKSSSMSASSSLPTRPPPVTTLSCPSC-------VSLDAALAPH 723

Query: 803  TLPP-STSNSTSIEPPVDFSSLGTHPMI-------------------TRAKAGIFKTRHP 862
              PP + ++S  + PP   S   T P++                   TR++ GIF+    
Sbjct: 724  PAPPVAPASSEPVSPPRTPSPASTSPIVLPASSDASIQPAPVAVRMQTRSQNGIFRPNPR 783

Query: 863  ANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTN 922
              L     + LL+AL  +++PKGFKSA K+P W+AAM++E+ AL+ N TWTLVPRP+  N
Sbjct: 784  YALAHHQPTALLTALHVASDPKGFKSAMKHPQWLAAMEDELSALRNNHTWTLVPRPSAPN 843

Query: 923  IVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVT 982
            IVGSKWVFR K+  DG++ER KARLVA+G+TQ+PG DY+ TFSPVVKATT+R++LS+AV 
Sbjct: 844  IVGSKWVFRTKHKSDGTIERLKARLVAQGFTQIPGFDYSLTFSPVVKATTIRLILSLAVL 903

Query: 983  NKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQR 1042
            N W L QLDVKNAFL+G L E V+MEQPPG++DPRFPTHVC L KALYGLKQAPRAWFQR
Sbjct: 904  NGWPLHQLDVKNAFLHGHLTEIVYMEQPPGFVDPRFPTHVCRLNKALYGLKQAPRAWFQR 963

Query: 1043 FSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGNNSSLIDSFTRKLHSEFA 1102
             SSFL+  GF CSRAD SLF F++    +YLL+YVDDII+TG++   +  F  +L++EFA
Sbjct: 964  LSSFLMRSGFICSRADPSLFFFYRGRITLYLLVYVDDIILTGSDPPFLTQFIARLNAEFA 1023

Query: 1103 TKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGS 1162
             K LG L YFLGLE + T DGLF+ Q KYA D+L+RA +L++KPV TP+    HL +DG 
Sbjct: 1024 IKYLGKLGYFLGLEITYTADGLFLGQAKYAHDLLSRAMMLEAKPVSTPLAAGFHLVSDGV 1083

Query: 1163 PFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHF 1222
             +SDPT YRSLVGALQYLTITRPD++YAVN+VSQFL APT DHF AVKRILRYV GT HF
Sbjct: 1084 AYSDPTQYRSLVGALQYLTITRPDLSYAVNTVSQFLQAPTIDHFQAVKRILRYVCGTQHF 1143

Query: 1223 GLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCES 1282
            GLTFR S  P+ L  YSDADWA C DTRRST GY+I+LG+NL+SWSAKKQPTV+RSSCES
Sbjct: 1144 GLTFRSSPSPAVL-GYSDADWARCTDTRRSTYGYAIFLGDNLLSWSAKKQPTVARSSCES 1203

Query: 1283 EYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYH 1342
            EYRA+A TA+EL+W+ +LL +L+V +S  PLLL DN+SA+F++ NPV+HKRAKH++LD H
Sbjct: 1204 EYRAMANTASELVWLLNLLRELRVGLSATPLLLSDNQSALFMAQNPVAHKRAKHIDLDCH 1263

Query: 1343 FLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLYVRSNPTLSLRGG 1372
            F+RELV +G+L  ++VP+ LQ+ADIFTK++ RPLFE FRSKL V  NPTLSL GG
Sbjct: 1264 FIRELVASGRLAVRHVPTSLQLADIFTKALPRPLFELFRSKLRVGLNPTLSLTGG 1290

BLAST of CmoCh09G001680 vs. NCBI nr
Match: gi|1012342872|gb|KYP54064.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan])

HSP 1 Score: 1194.1 bits (3088), Expect = 0.0e+00
Identity = 622/1132 (54.95%), Postives = 810/1132 (71.55%), Query Frame = 1

Query: 248  NSSNRGRTHSSQGRRP---PHCQICRKEGHYADRCNQRYVRPDSSHAHLAEAFNTSCSIA 307
            N  +R R ++S GRR    P CQICR++GHYA++C   + R   S A+LA+AF  SCS+ 
Sbjct: 67   NGGSRQRCNNS-GRRNSYVPRCQICREQGHYANKCLVHWDRSSES-ANLAQAFVASCSLD 126

Query: 308  GPDTADWFLDTGASAHMTADPSILDQSKNYTGKDSVIVGNGASLPITHTGTLSPVPNIHL 367
              + +DW++DTGA++HMT   S L  S+NY G D V V NG SL ITH G+LS    + L
Sbjct: 127  TSNRSDWYMDTGATSHMTPSSSQLTNSQNYNGTDHVFVSNGTSLNITHVGSLSLSRTVPL 186

Query: 368  LDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLITIQNRQTGRVVATGKRDGGLYVLERG 427
             DVLVVPHLTKNL+S+SKLT D      F +++  IQNR+TGRV+A G+ D GLYV+++G
Sbjct: 187  SDVLVVPHLTKNLVSVSKLTRDNHAKAIFVDDIFVIQNRKTGRVLARGRCDQGLYVMDQG 246

Query: 428  NSAFISALRNKSL-HASYDLWHARLGHVNHSIIYFLNRKGHLSLTSLLPSPSLCNTCQLA 487
              A ++   + SL  AS++LWH+RLGHVN  +I  LN++G+L+++S+LP P  C TCQ+A
Sbjct: 247  PQALLTT--SSSLPRASFELWHSRLGHVNFDVINKLNQQGYLNVSSILPKPVYCTTCQMA 306

Query: 488  KSHRLPYSRNERRSSHVLDLIHCDLWGPSPVKSNSGFLYYVIFIDDYSRFTWFYPLKFKS 547
            KS RL +  N +R+S VLDLIHCDLWGPSPV   +G+ Y+VIF+DD+SRFTWFY L+ KS
Sbjct: 307  KSKRLFFYDNNKRASTVLDLIHCDLWGPSPVAFVAGYSYFVIFVDDFSRFTWFYLLRHKS 366

Query: 548  DFFDIFLQFQKFVENQYSSRIKVFQSDGGTEFTSTCFKTHLRNSGIHHQLSCPYTPAQNG 607
             F+D+ ++F+ FVENQ+S  IKVFQSD GTEFT+   +    +SG+ H+ SCP+T AQNG
Sbjct: 367  YFYDVLVRFKVFVENQFSQFIKVFQSDNGTEFTNNKVQDLFASSGVFHRFSCPHTQAQNG 426

Query: 608  RAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGKSPFELLYGYTP 667
            R E+KHRHV E GLA+L+ SH+ + +W D+FS A YIINR+P+ +L G  PF LL+   P
Sbjct: 427  RVEQKHRHVLEIGLAMLYQSHVPTSYWDDSFSFAVYIINRVPSQVLSGHIPFTLLFQVAP 486

Query: 668  HYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLGYSPAHKGFRCLDPTTTKLYITCHAQ 727
             Y NFHPFGCR++P L  YM NK SPRS PCIFLGYS  HKGF+CLD TT+++Y++ HAQ
Sbjct: 487  TYANFHPFGCRLFPCLHPYMKNKFSPRSSPCIFLGYSSHHKGFKCLDLTTSRIYVSRHAQ 546

Query: 728  FDETHFPAIPSSQTQPLSSIP--ISNFLEPHFHRIDSSPPTTSSPQT--PRSSSSPCDIC 787
            FD+  FP   S    P SSI   +S+F EP      SS   +SS  T  P  ++  C  C
Sbjct: 547  FDKICFPFAGS----PSSSIDLMVSSFYEPITGFKSSSMSASSSLPTRPPPVTTLSCPSC 606

Query: 788  SDLVDESVQVDTSLTGSTLPP-STSNSTSIEPPVDFSSLGTHPMI--------------- 847
                   V +D +L     PP + ++S  + PP   S   T P++               
Sbjct: 607  -------VSLDAALAPHPAPPVAPASSEPVSPPRTPSPASTSPIVLPASSDASIQPAPVA 666

Query: 848  ----TRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRA 907
                TR++ GIF+      L     + LL+AL  + +PKGFK   K+P W+AAM++E+ A
Sbjct: 667  VRMQTRSQNGIFRPNLRYALAHHQPTTLLTALHGAADPKGFKFVMKHPQWLAAMEDELFA 726

Query: 908  LQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFS 967
            L  N TWTLVPRP+  NIVGSKWVFR K+  DG++ER KARLVA+G+TQ+PG DY+ TFS
Sbjct: 727  LHNNHTWTLVPRPSAPNIVGSKWVFRTKHKSDGTIERLKARLVAQGFTQIPGFDYSLTFS 786

Query: 968  PVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVCLL 1027
            PVVKATT+R++LS+AV N W L QLDVKNAFL+G L E V+MEQPPG++DPRF THVC L
Sbjct: 787  PVVKATTIRLILSLAVLNGWPLHQLDVKNAFLHGHLTETVYMEQPPGFVDPRFQTHVCRL 846

Query: 1028 KKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVTGN 1087
             KALYGLKQAPRAWFQR SSFL+  GF CSRAD SLF F++    +YLL+YVDDII+TG+
Sbjct: 847  NKALYGLKQAPRAWFQRLSSFLMRSGFICSRADPSLFFFYRGRITLYLLVYVDDIILTGS 906

Query: 1088 NSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSK 1147
            +   +  F  +L++EFA K LG L YFLGLE +   DGLF+ Q KYA D+L+RA +L++K
Sbjct: 907  DPLFLTQFIARLNAEFAIKYLGKLGYFLGLEITYIADGLFLGQAKYAHDLLSRAMMLEAK 966

Query: 1148 PVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADH 1207
            PV TP+    HL +DG  +SDPT YRSLVGALQY+TITRPD++YAVN+VSQFL APT DH
Sbjct: 967  PVSTPLAAGFHLVSDGVTYSDPTQYRSLVGALQYVTITRPDLSYAVNTVSQFLQAPTIDH 1026

Query: 1208 FLAVKRILRYVKGTLHFGLTFRPSTVPS-TLVAYSDADWAGCPDTRRSTSGYSIYLGNNL 1267
            F AVKRILRYV GT HFGLTF  S  PS  ++ YSDADWA C DTRRST GY+I+LG+NL
Sbjct: 1027 FQAVKRILRYVCGTQHFGLTFCSS--PSLAVLGYSDADWARCTDTRRSTYGYAIFLGDNL 1086

Query: 1268 VSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIFL 1327
            +S SAKKQPTV+RSSCESEYRA+A  A+EL+W+ +LL +L+V +S  PLLL DN+SA+F+
Sbjct: 1087 LSRSAKKQPTVARSSCESEYRAMANIASELVWLLNLLRELRVGLSATPLLLNDNQSAVFM 1146

Query: 1328 SSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPL 1351
            + NP++HK A+H+EL+ HF+RELV +G+L  ++VP+ LQ+ADIF K++ RP+
Sbjct: 1147 AQNPIAHKHAEHIELNCHFIRELVASGRLAVRHVPTSLQLADIFIKALPRPI 1181

BLAST of CmoCh09G001680 vs. NCBI nr
Match: gi|147788621|emb|CAN67588.1| (hypothetical protein VITISV_036280 [Vitis vinifera])

HSP 1 Score: 1132.5 bits (2928), Expect = 0.0e+00
Identity = 567/798 (71.05%), Postives = 664/798 (83.21%), Query Frame = 1

Query: 593  LSCPYTPAQNGRAERKHRHVTETGLALLFHSHLSSRFWVDAFSTAAYIINRLPTPLLGGK 652
            +SCPYTP+QNGRAERKHRHVTETGLALLFHSH+  ++WVDAFSTA YIINRLP P+LGG 
Sbjct: 1    MSCPYTPSQNGRAERKHRHVTETGLALLFHSHVPPQYWVDAFSTATYIINRLPLPVLGGL 60

Query: 653  SPFELLYGYTPHYDNFHPFGCRVYPYLRDYMPNKLSPRSIPCIFLGYSPAHKGFRCLDPT 712
            SPFE+L+G +P+Y+NFHPFGCRVYP LRDY P+K SPRS+PCIFLGYS +HKGFRC D T
Sbjct: 61   SPFEVLFGKSPNYENFHPFGCRVYPCLRDYAPHKFSPRSLPCIFLGYSSSHKGFRCFDTT 120

Query: 713  TTKLYITCHAQFDETHFPAIPSSQTQPLSSIPISNFLEPHFHRIDSSPPTTSSPQTPRSS 772
            T++ YIT HA+FDE  FP   +S    ++ I +SNF EP    ++ SP T+S   T    
Sbjct: 121  TSRTYITRHARFDEHFFPFSNTSSATSIADIGLSNFFEPC--ALEPSPSTSSPTTTRVPP 180

Query: 773  SSPCDICSD-LVDESVQVDTSLTGST-----LPPSTSNSTSIEP---PVD------FSSL 832
            S PC  C+D    E +QV +S   ST     + P  +++T++ P   P+D       ++ 
Sbjct: 181  SPPCHFCADDFAVEPLQVSSSAPESTSSSAAVSPVPASATTLVPFAAPMDPIHTTTSAAP 240

Query: 833  GTHPMITRAKAGIFKTRHPANLGILGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEI 892
             +HPMITRAK+GIFK RHPA+L  + SS L+ ALLA++EPKGFKSAAKNPAW+AAMD++I
Sbjct: 241  ASHPMITRAKSGIFKPRHPAHLSFVQSSPLIHALLATSEPKGFKSAAKNPAWLAAMDDKI 300

Query: 893  RALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDT 952
            +ALQ N TW LVPRP+NTNIVGSKWVFR K+L  GS+ERFKARLVAKGYTQ+PGLDY DT
Sbjct: 301  KALQTNHTWDLVPRPSNTNIVGSKWVFRTKFLSYGSIERFKARLVAKGYTQLPGLDYKDT 360

Query: 953  FSPVVKATTVRVVLSIAVTNKWHLRQLDVKNAFLNGTLIERVHMEQPPGYIDPRFPTHVC 1012
            FSPVVKA+TVRVVLS+AV++KW LRQLDVKNAFLNG L E V+MEQP GY+DPR P HVC
Sbjct: 361  FSPVVKASTVRVVLSLAVSHKWPLRQLDVKNAFLNGILHETVYMEQPLGYVDPRHPLHVC 420

Query: 1013 LLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSNIIYLLLYVDDIIVT 1072
             LKKALYGLKQAPRAWFQRFSSFLL LGF CSRADTSLFVF ++ ++IYLLLYVDDII+T
Sbjct: 421  KLKKALYGLKQAPRAWFQRFSSFLLKLGFFCSRADTSLFVFTKKDDLIYLLLYVDDIILT 480

Query: 1073 GNNSSLIDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLD 1132
            GNN +LI+ F  +LHSEFA KDLG LSYFLGLE S  PDG F+SQ+KYA DIL RAQLLD
Sbjct: 481  GNNPALINRFISQLHSEFAVKDLGPLSYFLGLEVSYIPDGFFLSQVKYATDILARAQLLD 540

Query: 1133 SKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTA 1192
            SKPV TPM+VSQ L+++G+PF+DPTLYRSLVGALQYLTITRP++A+++NSVSQFLHAPT 
Sbjct: 541  SKPVPTPMIVSQRLSSEGTPFADPTLYRSLVGALQYLTITRPNLAHSINSVSQFLHAPTE 600

Query: 1193 DHFLAVKRILRYVKGTLHFGLTFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNN 1252
             HF AVKRILRYV+GTLHFGL F  S     LVAYSDADWAGCPDTRRSTSGYSI+LGNN
Sbjct: 601  VHFQAVKRILRYVQGTLHFGLKF-TSCSSMGLVAYSDADWAGCPDTRRSTSGYSIFLGNN 660

Query: 1253 LVSWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISKQPLLLCDNKSAIF 1312
            LVSWSAKKQPTVSRSSCESEYRALA TAA++LW+THLL DL+V ++ +PLLLCDNKSAIF
Sbjct: 661  LVSWSAKKQPTVSRSSCESEYRALALTAAKVLWLTHLLRDLRVTLTHRPLLLCDNKSAIF 720

Query: 1313 LSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSK 1372
            LSSNPVSHKRAKHV+LDYHFLREL++AG LR Q++PSHLQ+AD+FTKS+SR L+ FFRSK
Sbjct: 721  LSSNPVSHKRAKHVDLDYHFLRELIVAGTLRIQHIPSHLQLADVFTKSVSRDLYVFFRSK 780

Query: 1373 LYVRSNPTLSLRGGVKDS 1376
            L V  NPTLSLRG V+DS
Sbjct: 781  LRVCVNPTLSLRGAVEDS 795

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
POLX_TOBAC2.4e-15530.62Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
COPIA_DROME7.7e-9337.42Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
M810_ARATH2.2e-6353.54Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0... [more]
YCH4_YEAST2.2e-3933.66Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
M820_ARATH2.4e-2545.86Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg0... [more]
Match NameE-valueIdentityDescription
A5AKX4_VITVI0.0e+0084.78Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015518 PE=4 SV=1[more]
A5CAZ2_VITVI0.0e+0066.59Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002539 PE=4 SV=1[more]
A0A151TC71_CAJCA0.0e+0055.89Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanu... [more]
A0A151SGU3_CAJCA0.0e+0054.95Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanu... [more]
A5B6R5_VITVI0.0e+0071.05Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036280 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G23160.14.3e-11846.03 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00810.11.2e-6453.54ATMG00810.1 DNA/RNA polymerases superfamily protein[more]
ATMG00820.11.3e-2645.86ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)[more]
ATMG00240.13.1e-1552.56ATMG00240.1 Gag-Pol-related retrotransposon family protein[more]
AT1G34070.11.9e-1228.00 Retrotransposon gag protein (InterPro:IPR005162)[more]
Match NameE-valueIdentityDescription
gi|147794811|emb|CAN78022.1|0.0e+0084.78hypothetical protein VITISV_015518 [Vitis vinifera][more]
gi|147843564|emb|CAN79884.1|0.0e+0066.59hypothetical protein VITISV_002539 [Vitis vinifera][more]
gi|1012353426|gb|KYP64614.1|0.0e+0055.89Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus ca... [more]
gi|1012342872|gb|KYP54064.1|0.0e+0054.95Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus ca... [more]
gi|147788621|emb|CAN67588.1|0.0e+0071.05hypothetical protein VITISV_036280 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR001878Znf_CCHC
IPR012337RNaseH-like_sf
IPR013103RVT_2
IPR025724GAG-pre-integrase_dom
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G001680.1CmoCh09G001680.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 499..613
score: 9.7
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 495..662
score: 21
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 261..282
score: 5.
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 495..655
score: 6.1
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 496..656
score: 7.71
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 883..1126
score: 5.9
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 417..485
score: 9.9
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 15..784
score: 0.0coord: 852..1285
score:
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 852..1285
score: 0.0coord: 15..784
score:
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 73..185
score: 7.2
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 1134..1316
score: 6.89E-34coord: 883..1105
score: 6.89

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh09G001680Watermelon (97103) v2cmowmbB014
CmoCh09G001680Watermelon (97103) v2cmowmbB023
CmoCh09G001680Wax gourdcmowgoB0000
CmoCh09G001680Wax gourdcmowgoB0005
CmoCh09G001680Cucurbita maxima (Rimu)cmacmoB435
CmoCh09G001680Cucurbita moschata (Rifu)cmocmoB033
CmoCh09G001680Cucurbita moschata (Rifu)cmocmoB004
CmoCh09G001680Cucurbita moschata (Rifu)cmocmoB017
CmoCh09G001680Cucumber (Gy14) v1cgycmoB0640
CmoCh09G001680Cucumber (Gy14) v1cgycmoB0920
CmoCh09G001680Cucurbita maxima (Rimu)cmacmoB027
CmoCh09G001680Cucurbita maxima (Rimu)cmacmoB165
CmoCh09G001680Cucurbita maxima (Rimu)cmacmoB755
CmoCh09G001680Wild cucumber (PI 183967)cmocpiB002
CmoCh09G001680Wild cucumber (PI 183967)cmocpiB008
CmoCh09G001680Cucumber (Chinese Long) v2cmocuB002
CmoCh09G001680Cucumber (Chinese Long) v2cmocuB008
CmoCh09G001680Melon (DHL92) v3.5.1cmomeB012
CmoCh09G001680Melon (DHL92) v3.5.1cmomeB021
CmoCh09G001680Watermelon (Charleston Gray)cmowcgB015
CmoCh09G001680Watermelon (Charleston Gray)cmowcgB023
CmoCh09G001680Watermelon (97103) v1cmowmB018
CmoCh09G001680Watermelon (97103) v1cmowmB007
CmoCh09G001680Cucurbita pepo (Zucchini)cmocpeB006
CmoCh09G001680Cucurbita pepo (Zucchini)cmocpeB020
CmoCh09G001680Cucurbita pepo (Zucchini)cmocpeB034
CmoCh09G001680Cucurbita pepo (Zucchini)cmocpeB037
CmoCh09G001680Bottle gourd (USVL1VR-Ls)cmolsiB012
CmoCh09G001680Bottle gourd (USVL1VR-Ls)cmolsiB020
CmoCh09G001680Cucumber (Gy14) v2cgybcmoB138
CmoCh09G001680Cucumber (Gy14) v2cgybcmoB260
CmoCh09G001680Melon (DHL92) v3.6.1cmomedB012
CmoCh09G001680Melon (DHL92) v3.6.1cmomedB020
CmoCh09G001680Silver-seed gourdcarcmoB0144
CmoCh09G001680Silver-seed gourdcarcmoB0255
CmoCh09G001680Silver-seed gourdcarcmoB1261
CmoCh09G001680Silver-seed gourdcarcmoB1307
CmoCh09G001680Cucumber (Chinese Long) v3cmocucB0004
CmoCh09G001680Cucumber (Chinese Long) v3cmocucB0012