CmoCh09G000960 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCACCGCCGCGGACTGAAGCGCGTCAACCATGGGTCATATGGTTCGGGCTCTCCGGCACTGGCCGATGTTGCAGAATCACTGTTTCGGTTGCACCGTACATCATTTTCTCTCATCTCCGCCGTGGGTGGCCAAAAGAATCGACTCTCGTCGACTAACTTTAGCTACCGTTCATTCTGCTCGTCGCGAAGTCCAATATGGATCGAAAGGTCTCAGATTATCCAAAGCTCAAGCTCCGGCCGAATTCCAAGAAGATGAGAGCGTTGATGAGGACTTGGATGTTAGAAAGAGCCGGAACCAGCTTAAACGGGAAGCTCGACGAGCCGTCCAATGGGGCATGGATCTCGCGGCCTTCTCCACTCCTCAAATTAAACGCATCCTTAGGTAATCATATCCTCTCATAACATTATCCGGCGACTTCTTATTCTTGTATAATGTTTATCACTGATAATCTTCGGGAGATGGTAAAGGAGTTTGAGTTTCCAAGTTTAGTGAGACTAATGCGAGATTTCTTTTACTTGTCCGGGGTGATAGAGTGGCGTCCCTCGAGAAAGATGTCTTCGATGCAATAATGCTTGTGAAGGTGATTCTTATAGTGCTTGAATTTTGTGGTTAGTCGTATCCTTTGGCAGTATGGCAACGCATGAACTTTTTATGTAGCTAAGGTGTTTGATTTTTTGACGCAGAGGCTTGGGCGTGATGTCAGAGAAGGAAAACGAAGGCAGTTTAGTTACATTGGTAAGCTGATATTTGATATTTCATTCTTTTGTAAAATGTGCATTTCGGCCATTCGTGTTAGTAGTTAGAACTGATAAAAATCACGACTCTCCACAATTGTATAACATTATCCACTTTGAGCCTAAGCTCTCGTGGTTTTGCTTTTTGTTTCCCAAAATACCTCATATCAATAGAGATAGTGTTCCTTATTTATAAACTCATAATCTTCCTCCTCTTAATTAGTTAACGTGGGACTACTTCTTTCAATAATCCTCAACATTCCTCCCATCGAACAAAGTAGACCATAAAACCTCTTCTTAGGCTTATGGACCCCTTAAACAGTCTCCCCTTAATCGAGGCTCGACTCCTTTCTCTAGTGCCTTCGAACAAAATACACCCTTTGTTCGACACTTGAGTCACTTTTGACTACACCTTCGAGGCTCACAACTTCTTTGTTCGACATTTGAGGATTCTATTGACATGGCTAAGTTAAGGCATGGCTCTAATATCATGTTAGAAATCACGACTCCCCATAATAGTATGATATTGTTCACTTTGAGCATAAGCTCTTATGGCTTTGCTTTTTGTTTCCCAAAAGGTCTCATACCAATGGAGGGACACTTTGTTCCTTACCTATAAACCCATAATCTTTCTCTTAATTAGCCAATGTGGGACCACTTCTTTCGGTATTCTAATGTAAGAATATTAAACTTGGATCACCATGACGTGATGGTTTATCAAGAACAATTGAAGAAGAAATATAAACTTGCTGCCTATGCGATCCTTGACAAACGTATGAGACCGAGATCCTGTAAAATGTAAGGCACAAAATCGCATTTTAAGAGAACAGTCTTCTCAAATTTGAAATGGAGGGCCTTGAAATGACCATAACTCTGGTTAGGGTATTGGGGTCATTGTTCTAAGCAGCACGGACTTGGGACACAAACATGTCATGATGCAGATATGATGATATGTCAATTTCTACAGAAGTAGAACACAAACACGTTGGGGACATGTTTTTAGAATATATGTGTGTATAATTGATACATTAATACTTCTTTAGCTAAGGAAGTGTAAATTTATTTTTCCAAAGCATTCGTATTCTGTGGCTCTGATAAATTGGCTTAATTTGCTATAGGAAAACTGCTGAGGGATGTTCAACCTGAATTAATGGACAGTTTAATACAGGCCACAAAAGACGGTGACCATAGCATGCTGCAGACATTGTCTGGTTCGGTAGCAGTTGACGATGATGAAGATACAGACTCTGAATATGAGGAGGAGGAAGAAGAGGTATTTTATGTCCTGGTTCTTTTACACATTACCGCTTCTTTTACATACCAAATTGTTATAATTTTTGTTAAAGTTTATTTGTCTTGCTGACCTTTTCTAAGACTATACTACAGCATGGAACCGAATGAAATGTAAAAACTACACTTAGAAATTAGAGCCAGCGGAGTATGGCTACTGTTGCTTTATTAGGATTTAACTTTGATTAATATACAGGAACTTGTCAAAACTGTAAAAACCCATGTTTTTTTTTTTTTGTGATGAGTAAAAACCTATGTTTCTGGACTCAATTGAAGGGGCATTATGTTCATAAATGTCATTTTATACCATGTTCATTTTAATTTTAGAAGTTTTTCTTCCCCTTTCCCTCCATATCTTTCTTAATTAGGGTCCGCATGTGGACATTGTTACAAGATGGCTTGATGGGTTAGTCAGTAAGGACAAGAACGTTACAAATGAAATTTATTCGCTACAAACTGTTGAATTTGACCGTCAGGTACTTGACTTACTACATCCCTACTTTTTTCTCTTCTTTTCTTTTCATGTCAATGGTGTGCCACCCTTACCCATTTTTGTAACGTTCTAAGTTGTTTAAGATTTTGGGTGTGTGTGTGAGAGAGAGAGAGATAATAAACATTAAGAGAAAATGTCAAAAAGAGGTGAAAACCCCTATCCAAGGGAAATTAACAGGAAAAAAAAAAAAACACTTCCACTGGGCTATAATTGTAGAAAAGCTATAGCTCTGAAAATATGAAGAAAATGTACACTAAGTGAGCGCCAAAAAAAAGGATCGTGTTTAAGAAAAAACCATGGAAGGCAAATAAAAGTTATTTAAGATAGTTGCAAACAAAAGAGGGCCTCTGTATGCATCTAGCTGAAAAAGTTATAATCAGGCCTGCCTTGTCAACTATCAATTACCCAAGAACAATAGGACAAGATTTTCGGAACAATTACAACTTGAAGCTTTTATTAGCTAAGTTAGATAATCTATTCCCATGCGATTCTGACTAGCATGAAAATCATCAACAGGAGCTGCGGAGACTTGTCCGAAAAGTGCACATGGTTGAAGAACGCAAGGCGGCAACTGAAGAGAATGAGGATGAAGTCAATGTGGCAATAACAACCGCTAAGAAGCCCCTTGCTCGTTTTCTTTGTAGAATGGCGAAACAACTGCCCCCTTATGAACTCTAGTACAAATTTATTTGTGCACTACATTAACTTCGCATTCTTTCTTATGCACACATATTTGTTTTTTATAACCTTGCAGACTGTTAATTCTCACTTCCAACACATTTTTTCTTTTCCCTCTCACCTTCTTTCAACTCTGCTTGATCAAGTTGTTGAGTGCTAACTAGGCTCTTAGAGACTGTTTACCAGGC AACCACCGCCGCGGACTGAAGCGCGTCAACCATGGGTCATATGGTTCGGGCTCTCCGGCACTGGCCGATGTTGCAGAATCACTGTTTCGGTTGCACCGTACATCATTTTCTCTCATCTCCGCCGTGGGTGGCCAAAAGAATCGACTCTCGTCGACTAACTTTAGCTACCGTTCATTCTGCTCGTCGCGAAGTCCAATATGGATCGAAAGGTCTCAGATTATCCAAAGCTCAAGCTCCGGCCGAATTCCAAGAAGATGAGAGCGTTGATGAGGACTTGGATGTTAGAAAGAGCCGGAACCAGCTTAAACGGGAAGCTCGACGAGCCGTCCAATGGGGCATGGATCTCGCGGCCTTCTCCACTCCTCAAATTAAACGCATCCTTAGAGTGGCGTCCCTCGAGAAAGATGTCTTCGATGCAATAATGCTTGTGAAGAGGCTTGGGCGTGATGTCAGAGAAGGAAAACGAAGGCAGTTTAGTTACATTGGAAAACTGCTGAGGGATGTTCAACCTGAATTAATGGACAGTTTAATACAGGCCACAAAAGACGGTGACCATAGCATGCTGCAGACATTGTCTGGTTCGGTAGCAGTTGACGATGATGAAGATACAGACTCTGAATATGAGGAGGAGGAAGAAGAGGGTCCGCATGTGGACATTGTTACAAGATGGCTTGATGGGTTAGTCAGTAAGGACAAGAACGTTACAAATGAAATTTATTCGCTACAAACTGTTGAATTTGACCGTCAGGAGCTGCGGAGACTTGTCCGAAAAGTGCACATGGTTGAAGAACGCAAGGCGGCAACTGAAGAGAATGAGGATGAAGTCAATGTGGCAATAACAACCGCTAAGAAGCCCCTTGCTCGTTTTCTTTGTAGAATGGCGAAACAACTGCCCCCTTATGAACTCTAGTACAAATTTATTTGTGCACTACATTAACTTCGCATTCTTTCTTATGCACACATATTTGTTTTTTATAACCTTGCAGACTGTTAATTCTCACTTCCAACACATTTTTTCTTTTCCCTCTCACCTTCTTTCAACTCTGCTTGATCAAGTTGTTGAGTGCTAACTAGGCTCTTAGAGACTGTTTACCAGGC ATGGGTCATATGGTTCGGGCTCTCCGGCACTGGCCGATGTTGCAGAATCACTGTTTCGGTTGCACCGTACATCATTTTCTCTCATCTCCGCCGTGGGTGGCCAAAAGAATCGACTCTCGTCGACTAACTTTAGCTACCGTTCATTCTGCTCGTCGCGAAGTCCAATATGGATCGAAAGGTCTCAGATTATCCAAAGCTCAAGCTCCGGCCGAATTCCAAGAAGATGAGAGCGTTGATGAGGACTTGGATGTTAGAAAGAGCCGGAACCAGCTTAAACGGGAAGCTCGACGAGCCGTCCAATGGGGCATGGATCTCGCGGCCTTCTCCACTCCTCAAATTAAACGCATCCTTAGAGTGGCGTCCCTCGAGAAAGATGTCTTCGATGCAATAATGCTTGTGAAGAGGCTTGGGCGTGATGTCAGAGAAGGAAAACGAAGGCAGTTTAGTTACATTGGAAAACTGCTGAGGGATGTTCAACCTGAATTAATGGACAGTTTAATACAGGCCACAAAAGACGGTGACCATAGCATGCTGCAGACATTGTCTGGTTCGGTAGCAGTTGACGATGATGAAGATACAGACTCTGAATATGAGGAGGAGGAAGAAGAGGGTCCGCATGTGGACATTGTTACAAGATGGCTTGATGGGTTAGTCAGTAAGGACAAGAACGTTACAAATGAAATTTATTCGCTACAAACTGTTGAATTTGACCGTCAGGAGCTGCGGAGACTTGTCCGAAAAGTGCACATGGTTGAAGAACGCAAGGCGGCAACTGAAGAGAATGAGGATGAAGTCAATGTGGCAATAACAACCGCTAAGAAGCCCCTTGCTCGTTTTCTTTGTAGAATGGCGAAACAACTGCCCCCTTATGAACTCTAG
BLAST of CmoCh09G000960 vs. TrEMBL
Match: A0A0A0LH61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G872730 PE=4 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 3.3e-117 Identity = 238/299 (79.60%), Postives = 252/299 (84.28%), Query Frame = 1
BLAST of CmoCh09G000960 vs. TrEMBL
Match: B9H4Z2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s26230g PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 3.2e-80 Identity = 161/292 (55.14%), Postives = 215/292 (73.63%), Query Frame = 1
BLAST of CmoCh09G000960 vs. TrEMBL
Match: E0CQ76_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14460 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 5.2e-78 Identity = 172/297 (57.91%), Postives = 215/297 (72.39%), Query Frame = 1
BLAST of CmoCh09G000960 vs. TrEMBL
Match: W9RWS0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016072 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 6.7e-78 Identity = 169/293 (57.68%), Postives = 208/293 (70.99%), Query Frame = 1
BLAST of CmoCh09G000960 vs. TrEMBL
Match: A0A061FE97_THECC (Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_034242 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 2.8e-76 Identity = 161/302 (53.31%), Postives = 218/302 (72.19%), Query Frame = 1
BLAST of CmoCh09G000960 vs. TAIR10
Match: AT4G24175.1 (AT4G24175.1 unknown protein) HSP 1 Score: 232.6 bits (592), Expect = 3.0e-61 Identity = 146/305 (47.87%), Postives = 194/305 (63.61%), Query Frame = 1
BLAST of CmoCh09G000960 vs. NCBI nr
Match: gi|449437196|ref|XP_004136378.1| (PREDICTED: uncharacterized protein LOC101214378 [Cucumis sativus]) HSP 1 Score: 429.5 bits (1103), Expect = 4.7e-117 Identity = 238/299 (79.60%), Postives = 252/299 (84.28%), Query Frame = 1
BLAST of CmoCh09G000960 vs. NCBI nr
Match: gi|659132955|ref|XP_008466476.1| (PREDICTED: uncharacterized protein LOC103503870 [Cucumis melo]) HSP 1 Score: 421.4 bits (1082), Expect = 1.3e-114 Identity = 237/299 (79.26%), Postives = 250/299 (83.61%), Query Frame = 1
BLAST of CmoCh09G000960 vs. NCBI nr
Match: gi|224083048|ref|XP_002306937.1| (hypothetical protein POPTR_0005s26230g [Populus trichocarpa]) HSP 1 Score: 306.6 bits (784), Expect = 4.6e-80 Identity = 161/292 (55.14%), Postives = 215/292 (73.63%), Query Frame = 1
BLAST of CmoCh09G000960 vs. NCBI nr
Match: gi|743903440|ref|XP_011045070.1| (PREDICTED: uncharacterized protein LOC105140085 [Populus euphratica]) HSP 1 Score: 302.8 bits (774), Expect = 6.7e-79 Identity = 160/292 (54.79%), Postives = 212/292 (72.60%), Query Frame = 1
BLAST of CmoCh09G000960 vs. NCBI nr
Match: gi|1009135197|ref|XP_015884857.1| (PREDICTED: uncharacterized protein LOC107420416 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 302.4 bits (773), Expect = 8.7e-79 Identity = 171/295 (57.97%), Postives = 207/295 (70.17%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |