CmoCh09G000710 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh09G000710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ubiquitin-like superfamily protein
Location	Cmo_Chr09 : 321568 .. 322693 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTGAGAGAGAGAGATGTAGAAATGAAGCACAGAATTGTGAGCCAAAATTCCATTATTGAAACGCCCAAATATTCATACATGCTTTGATCTTCAACCCAAAAAGTCCCAAAGGATGAACGCCTACTCTCATTAGCCCTTTCCTCCCCCTCCTCCTCCTCCTCCTTTCTCCAACAATCCTGGAGTTCATGAACCGTTTCGAGCGCGCAATTTCCAAAAATGGTGGTATTGTTTGGATTTGATTGATTTCTTTTGCATAAACGTATTTTTCAATTCAACCAACCAACCATCTTTAACATTTTTCTTTCATTTTCAAACAACTTAGGAAGTCTCCAAGGGTTCGAACTCCCCACCAATCCTCAACAACTGCAAACCACTAAATCTCTGGGTGTTGTCTTGCGAAATGCACAGCAACTCCTCGGTGATTATGCCACATCCTCACTCCCTGTAAGTACTCTATTTATTCTTTTTTCTCCCTAAATTTCTTAATTTAATAATGGATAAATATGCAGCGCATTGCCGAGCGATTCGAGGAAGAAGGCTCTTCCACTGACCCCACGGTGAGGGGTCAAATACAAGAGGAGTTAGTACAAGTAGGTCTTAGGATGCAACAATTTGGAGCACTTCTTCTCGACCTTGGCACTTCAATCTTGGCGCTCCGTTTGGAACAATCAACCGTAAGTTTTGCTTTTCTTTGCATAACATATGTAATTCAAATTAAGTTTCAATTCAGTTCATATGATTCGCTTCATTATTTTTACATATAATATAGATTGACATCCAAGATGTTGGTCGAAGGGTTATTTGTAGCCATTCCCCAATGGATGTGTTTCGCGCTGTGGTAGAGAGCTCAGCTCAAATTTCTGGGAGTAGTAGTGAAGATATTGCTAATGAGTTGTGCAGCCACGACACACTTGCTCAGGTACTAATATCTTTCTTTTTAACTTCTCATTTTATGGATTTTGAGGTGTTTGTTTGCTGTCAATTTTTTTGTAGGAATATTTAGAGATGTTATCAAGTGATATAAACCGACGCTTACAAACCACTTCAGAACACCAAAATTAATACATTTCTGGCAGCTTTGTCAATGGGGGATTTGATATATATTTCTATTTATTATTATTAGC

mRNA sequence

GTGTGAGAGAGAGAGATGTAGAAATGAAGCACAGAATTGTGAGCCAAAATTCCATTATTGAAACGCCCAAATATTCATACATGCTTTGATCTTCAACCCAAAAAGTCCCAAAGGATGAACGCCTACTCTCATTAGCCCTTTCCTCCCCCTCCTCCTCCTCCTCCTTTCTCCAACAATCCTGGAGTTCATGAACCGTTTCGAGCGCGCAATTTCCAAAAATGGTGGAAGTCTCCAAGGGTTCGAACTCCCCACCAATCCTCAACAACTGCAAACCACTAAATCTCTGGGTGTTGTCTTGCGAAATGCACAGCAACTCCTCGGTGATTATGCCACATCCTCACTCCCTCGCATTGCCGAGCGATTCGAGGAAGAAGGCTCTTCCACTGACCCCACGGTGAGGGGTCAAATACAAGAGGAGTTAGTACAAGTAGGTCTTAGGATGCAACAATTTGGAGCACTTCTTCTCGACCTTGGCACTTCAATCTTGGCGCTCCGTTTGGAACAATCAACCATTGACATCCAAGATGTTGGTCGAAGGGTTATTTGTAGCCATTCCCCAATGGATGTGTTTCGCGCTGTGGTAGAGAGCTCAGCTCAAATTTCTGGGAGTAGTAGTGAAGATATTGCTAATGAGTTGTGCAGCCACGACACACTTGCTCAGGAATATTTAGAGATGTTATCAAGTGATATAAACCGACGCTTACAAACCACTTCAGAACACCAAAATTAATACATTTCTGGCAGCTTTGTCAATGGGGGATTTGATATATATTTCTATTTATTATTATTAGC

Coding sequence (CDS)

ATGAACCGTTTCGAGCGCGCAATTTCCAAAAATGGTGGAAGTCTCCAAGGGTTCGAACTCCCCACCAATCCTCAACAACTGCAAACCACTAAATCTCTGGGTGTTGTCTTGCGAAATGCACAGCAACTCCTCGGTGATTATGCCACATCCTCACTCCCTCGCATTGCCGAGCGATTCGAGGAAGAAGGCTCTTCCACTGACCCCACGGTGAGGGGTCAAATACAAGAGGAGTTAGTACAAGTAGGTCTTAGGATGCAACAATTTGGAGCACTTCTTCTCGACCTTGGCACTTCAATCTTGGCGCTCCGTTTGGAACAATCAACCATTGACATCCAAGATGTTGGTCGAAGGGTTATTTGTAGCCATTCCCCAATGGATGTGTTTCGCGCTGTGGTAGAGAGCTCAGCTCAAATTTCTGGGAGTAGTAGTGAAGATATTGCTAATGAGTTGTGCAGCCACGACACACTTGCTCAGGAATATTTAGAGATGTTATCAAGTGATATAAACCGACGCTTACAAACCACTTCAGAACACCAAAATTAA

Homology

[Close]

BLAST of CmoCh09G000710 vs. TrEMBL
Match: A0A0A0L4G3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653430 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 5.8e-64
Identity = 131/182 (71.98%), Postives = 163/182 (89.56%), Query Frame = 1


Query: 1   MNRFERAIS--KNGGSLQGFELPTNPQQLQTTKSLGVVLRNAQQLLGDYATSSLPRIAER 60
           MNRFERAIS  +NGG+ + FELPTNPQ+LQ+ +SL +VLRNAQ+LL DYA  SLPRIAER
Sbjct: 1   MNRFERAISISQNGGAPR-FELPTNPQELQSPESLSIVLRNAQKLLSDYAIFSLPRIAER 60

Query: 61  FEEEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQSTIDIQDVGRRV 120
           FE++GSS+DP VRGQIQEELVQVGLRMQQFGALLLDLG+SIL LR+EQST+D+QD+  RV
Sbjct: 61  FEQDGSSSDPNVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLRMEQSTVDLQDLAERV 120

Query: 121 ICSHSPMDVFRAVVESSAQISGSSSEDIANELCSHDTLAQEYLEMLSSDINRRLQTTSEH 180
           + ++ PMDVFRAVVESSA+ISGSS+ DIAN LC+HD+LA+EYLE+L++DI+RRL++ SE 
Sbjct: 121 VSTNCPMDVFRAVVESSARISGSSAHDIANHLCTHDSLAEEYLEILATDISRRLESNSEQ 180

[Close]

BLAST of CmoCh09G000710 vs. TrEMBL
Match: A0A0A0L194_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653440 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.9e-33
Identity = 78/110 (70.91%), Postives = 90/110 (81.82%), Query Frame = 1


Query: 1   MNRFERAISKNGGSLQGFELPTNPQQLQTTKSLGVVLRNAQQLLGDYATSSLPRIAERFE 60
           MNR E AIS+NGG L   ELPTNPQ L TT+SL +VLR+AQ+LL DYA SSL RIAER E
Sbjct: 259 MNRMELAISQNGGDLTRVELPTNPQGLPTTESLSIVLRHAQRLLSDYAISSLSRIAERLE 318

Query: 61  EEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQSTID 111
           +  SSTDPTVRGQIQEE VQVGLRMQQFG+LLL+LG +IL LR+ QS ++
Sbjct: 319 QNSSSTDPTVRGQIQEESVQVGLRMQQFGSLLLELGRTILTLRMGQSPVE 368

[Close]

BLAST of CmoCh09G000710 vs. TrEMBL
Match: M5Y431_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000989mg PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.0e-20
Identity = 66/155 (42.58%), Postives = 97/155 (62.58%), Query Frame = 1


Query: 1   MNRFERAISKNG----------GSLQGFELPTNPQQLQTTKSLGVVLRNAQQLLGDYATS 60
           MNR E+A+++NG          G +    LP+N Q + T ++LG+VLR+A++LL  +A S
Sbjct: 251 MNRMEQALTQNGYQPNLSATNTGDVPRVNLPSNAQGMPTPEALGIVLRHAERLLSSHAVS 310

Query: 61  SLPRIAERFEEEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQSTID 120
           +L  IA R E+EG+S+DP+VRGQIQ E +QVGL MQ  GAL L+LG +I  LR+ QS  +
Sbjct: 311 ALSHIAGRLEQEGASSDPSVRGQIQTEFMQVGLAMQHLGALFLELGRTIWTLRMGQSPGE 370

Query: 121 -IQDVGRRVICSHS---PMDVFRAVVESSAQISGS 142
            + + G  V  S S   P+ V    +++S  + GS
Sbjct: 371 AVVNAGPAVYISPSGPNPIMVQPFPLQTSTMLGGS 405

[Close]

BLAST of CmoCh09G000710 vs. TrEMBL
Match: R0GNV2_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10025849mg PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.4e-19
Identity = 59/117 (50.43%), Postives = 78/117 (66.67%), Query Frame = 1


Query: 1   MNRFERAISKNG-------GSLQGF---ELPTNPQQLQTTKSLGVVLRNAQQLLGDYATS 60
           +N+ E+A+S+NG        + +G    ELP N +   T ++L +VLRNAQ LL     S
Sbjct: 262 INQMEQALSRNGYHADTSSATSRGQPREELPRNRRGASTPEALAIVLRNAQHLLSGLGVS 321

Query: 61  SLPRIAERFEEEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQS 108
           SL  IA R E++G+S+DPT+R QIQ E VQVGL MQ FGALLL+LG +IL LR+ QS
Sbjct: 322 SLSHIARRLEQDGTSSDPTIRAQIQTEAVQVGLAMQHFGALLLELGRTILTLRMAQS 378

[Close]

BLAST of CmoCh09G000710 vs. TrEMBL
Match: R0EUR7_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10025849mg PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.4e-19
Identity = 58/113 (51.33%), Postives = 75/113 (66.37%), Query Frame = 1


Query: 1   MNRFERAISKNGGSLQGF------ELPTNPQQLQTTKSLGVVLRNAQQLLGDYATSSLPR 60
           +N+ E+A+S+N  S          ELP N +   T ++L +VLRNAQ LL     SSL  
Sbjct: 262 INQMEQALSRNDTSSATSRGQPREELPRNRRGASTPEALAIVLRNAQHLLSGLGVSSLSH 321

Query: 61  IAERFEEEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQS 108
           IA R E++G+S+DPT+R QIQ E VQVGL MQ FGALLL+LG +IL LR+ QS
Sbjct: 322 IARRLEQDGTSSDPTIRAQIQTEAVQVGLAMQHFGALLLELGRTILTLRMAQS 374

[Close]

BLAST of CmoCh09G000710 vs. TAIR10
Match: AT5G42220.1 (AT5G42220.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 6.4e-22
Identity = 60/117 (51.28%), Postives = 74/117 (63.25%), Query Frame = 1


Query: 1   MNRFERAISKNG----------GSLQGFELPTNPQQLQTTKSLGVVLRNAQQLLGDYATS 60
           +NR E+A+S+NG          G     ELP N +   T ++L VVLRNAQ LL     S
Sbjct: 261 INRMEQALSQNGYQPDTSSAGSGGRPREELPRNRRGAATPEALSVVLRNAQHLLSGLGVS 320

Query: 61  SLPRIAERFEEEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQS 108
           SL  IA R E++GSS+DPT+R QIQ E VQVGL MQ  GALLL+LG +IL LR+  S
Sbjct: 321 SLSHIAGRLEQDGSSSDPTLRSQIQTEAVQVGLAMQHLGALLLELGRTILTLRMAPS 377

[Close]

BLAST of CmoCh09G000710 vs. NCBI nr
Match: gi|659104389|ref|XP_008452929.1| (PREDICTED: uncharacterized protein LOC103493795 isoform X1 [Cucumis melo])

HSP 1 Score: 257.7 bits (657), Expect = 1.5e-65
Identity = 134/182 (73.63%), Postives = 160/182 (87.91%), Query Frame = 1


Query: 1   MNRFERAIS--KNGGSLQGFELPTNPQQLQTTKSLGVVLRNAQQLLGDYATSSLPRIAER 60
           MNRFERAIS  +NGG    FELPTNPQ+LQ+ +SL +VLRNAQ+LL DYA  SLPRIAER
Sbjct: 1   MNRFERAISISQNGGGAPRFELPTNPQELQSPESLSIVLRNAQKLLSDYAIFSLPRIAER 60

Query: 61  FEEEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQSTIDIQDVGRRV 120
           FE++GSS+DP VRGQIQEELVQVGLRMQQFGALLLDLG+SIL LRLEQST+D+QD+  RV
Sbjct: 61  FEQDGSSSDPDVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLRLEQSTVDLQDLAERV 120

Query: 121 ICSHSPMDVFRAVVESSAQISGSSSEDIANELCSHDTLAQEYLEMLSSDINRRLQTTSEH 180
           + ++ PMDVFRAVVESSA+ISGSS+ DIAN LC+HD+LA+EYLE+L+SDI RRLQ+ SE 
Sbjct: 121 VSTNCPMDVFRAVVESSARISGSSTHDIANHLCTHDSLAEEYLEILASDITRRLQSNSEQ 180

[Close]

BLAST of CmoCh09G000710 vs. NCBI nr
Match: gi|778697104|ref|XP_011654258.1| (PREDICTED: uncharacterized protein LOC101215937 isoform X1 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 7.6e-65
Identity = 131/182 (71.98%), Postives = 161/182 (88.46%), Query Frame = 1


Query: 1   MNRFERAIS--KNGGSLQGFELPTNPQQLQTTKSLGVVLRNAQQLLGDYATSSLPRIAER 60
           MNRFERAIS  +NGG    FELPTNPQ+LQ+ +SL +VLRNAQ+LL DYA  SLPRIAER
Sbjct: 1   MNRFERAISISQNGGGAPRFELPTNPQELQSPESLSIVLRNAQKLLSDYAIFSLPRIAER 60

Query: 61  FEEEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQSTIDIQDVGRRV 120
           FE++GSS+DP VRGQIQEELVQVGLRMQQFGALLLDLG+SIL LR+EQST+D+QD+  RV
Sbjct: 61  FEQDGSSSDPNVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLRMEQSTVDLQDLAERV 120

Query: 121 ICSHSPMDVFRAVVESSAQISGSSSEDIANELCSHDTLAQEYLEMLSSDINRRLQTTSEH 180
           + ++ PMDVFRAVVESSA+ISGSS+ DIAN LC+HD+LA+EYLE+L++DI+RRL++ SE 
Sbjct: 121 VSTNCPMDVFRAVVESSARISGSSAHDIANHLCTHDSLAEEYLEILATDISRRLESNSEQ 180

[Close]

BLAST of CmoCh09G000710 vs. NCBI nr
Match: gi|659104393|ref|XP_008452932.1| (PREDICTED: uncharacterized protein LOC103493795 isoform X2 [Cucumis melo])

HSP 1 Score: 254.2 bits (648), Expect = 1.7e-64
Identity = 134/182 (73.63%), Postives = 162/182 (89.01%), Query Frame = 1


Query: 1   MNRFERAIS--KNGGSLQGFELPTNPQQLQTTKSLGVVLRNAQQLLGDYATSSLPRIAER 60
           MNRFERAIS  +NGG+ + FELPTNPQ+LQ+ +SL +VLRNAQ+LL DYA  SLPRIAER
Sbjct: 1   MNRFERAISISQNGGAPR-FELPTNPQELQSPESLSIVLRNAQKLLSDYAIFSLPRIAER 60

Query: 61  FEEEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQSTIDIQDVGRRV 120
           FE++GSS+DP VRGQIQEELVQVGLRMQQFGALLLDLG+SIL LRLEQST+D+QD+  RV
Sbjct: 61  FEQDGSSSDPDVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLRLEQSTVDLQDLAERV 120

Query: 121 ICSHSPMDVFRAVVESSAQISGSSSEDIANELCSHDTLAQEYLEMLSSDINRRLQTTSEH 180
           + ++ PMDVFRAVVESSA+ISGSS+ DIAN LC+HD+LA+EYLE+L+SDI RRLQ+ SE 
Sbjct: 121 VSTNCPMDVFRAVVESSARISGSSTHDIANHLCTHDSLAEEYLEILASDITRRLQSNSEQ 180

[Close]

BLAST of CmoCh09G000710 vs. NCBI nr
Match: gi|778697108|ref|XP_011654259.1| (PREDICTED: uncharacterized protein LOC101215937 isoform X2 [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 8.4e-64
Identity = 131/182 (71.98%), Postives = 163/182 (89.56%), Query Frame = 1


Query: 1   MNRFERAIS--KNGGSLQGFELPTNPQQLQTTKSLGVVLRNAQQLLGDYATSSLPRIAER 60
           MNRFERAIS  +NGG+ + FELPTNPQ+LQ+ +SL +VLRNAQ+LL DYA  SLPRIAER
Sbjct: 1   MNRFERAISISQNGGAPR-FELPTNPQELQSPESLSIVLRNAQKLLSDYAIFSLPRIAER 60

Query: 61  FEEEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQSTIDIQDVGRRV 120
           FE++GSS+DP VRGQIQEELVQVGLRMQQFGALLLDLG+SIL LR+EQST+D+QD+  RV
Sbjct: 61  FEQDGSSSDPNVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLRMEQSTVDLQDLAERV 120

Query: 121 ICSHSPMDVFRAVVESSAQISGSSSEDIANELCSHDTLAQEYLEMLSSDINRRLQTTSEH 180
           + ++ PMDVFRAVVESSA+ISGSS+ DIAN LC+HD+LA+EYLE+L++DI+RRL++ SE 
Sbjct: 121 VSTNCPMDVFRAVVESSARISGSSAHDIANHLCTHDSLAEEYLEILATDISRRLESNSEQ 180

[Close]

BLAST of CmoCh09G000710 vs. NCBI nr
Match: gi|778697114|ref|XP_011654261.1| (PREDICTED: large proline-rich protein BAG6 isoform X2 [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 1.0e-32
Identity = 78/110 (70.91%), Postives = 90/110 (81.82%), Query Frame = 1


Query: 1   MNRFERAISKNGGSLQGFELPTNPQQLQTTKSLGVVLRNAQQLLGDYATSSLPRIAERFE 60
           MNR E AIS+NGG L   ELPTNPQ L TT+SL +VLR+AQ+LL DYA SSL RIAER E
Sbjct: 259 MNRMELAISQNGGDLTRVELPTNPQGLPTTESLSIVLRHAQRLLSDYAISSLSRIAERLE 318

Query: 61  EEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQSTID 111
           +  SSTDPTVRGQIQEE VQVGLRMQQFG+LLL+LG +IL LR+ QS ++
Sbjct: 319 QNSSSTDPTVRGQIQEESVQVGLRMQQFGSLLLELGRTILTLRMGQSPVE 368

The following BLAST results are available for this feature:

BLAST of CmoCh09G000710 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh09G000710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4G3_CUCSA	5.8e-64	71.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653430 PE=4 SV=1	[more]
A0A0A0L194_CUCSA	6.9e-33	70.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653440 PE=4 SV=1	[more]
M5Y431_PRUPE	4.0e-20	42.58	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000989mg PE=4 SV=1	[more]
R0GNV2_9BRAS	4.4e-19	50.43	Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10025849mg PE=4...	[more]
R0EUR7_9BRAS	4.4e-19	51.33	Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10025849mg PE=4...	[more]

BLAST of CmoCh09G000710 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G42220.1	6.4e-22	51.28	Ubiquitin-like superfamily protein	[more]

BLAST of CmoCh09G000710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659104389\|ref\|XP_008452929.1\|	1.5e-65	73.63	PREDICTED: uncharacterized protein LOC103493795 isoform X1 [Cucumis melo]	[more]
gi\|778697104\|ref\|XP_011654258.1\|	7.6e-65	71.98	PREDICTED: uncharacterized protein LOC101215937 isoform X1 [Cucumis sativus]	[more]
gi\|659104393\|ref\|XP_008452932.1\|	1.7e-64	73.63	PREDICTED: uncharacterized protein LOC103493795 isoform X2 [Cucumis melo]	[more]
gi\|778697108\|ref\|XP_011654259.1\|	8.4e-64	71.98	PREDICTED: uncharacterized protein LOC101215937 isoform X2 [Cucumis sativus]	[more]
gi\|778697114\|ref\|XP_011654261.1\|	1.0e-32	70.91	PREDICTED: large proline-rich protein BAG6 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G000710.1	CmoCh09G000710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15204	SCYTHE/BAT3	coord: 22..107 score: 1.1
None	No IPR available	PANTHER	PTHR15204:SF1	SUBFAMILY NOT NAMED	coord: 22..107 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh09G000710	Wild cucumber (PI 183967)	cmocpiB016
CmoCh09G000710	Cucumber (Chinese Long) v2	cmocuB015
CmoCh09G000710	Melon (DHL92) v3.5.1	cmomeB026
CmoCh09G000710	Watermelon (Charleston Gray)	cmowcgB018
CmoCh09G000710	Watermelon (97103) v1	cmowmB021
CmoCh09G000710	Cucurbita pepo (Zucchini)	cmocpeB020
CmoCh09G000710	Cucurbita pepo (Zucchini)	cmocpeB034
CmoCh09G000710	Bottle gourd (USVL1VR-Ls)	cmolsiB012
CmoCh09G000710	Cucumber (Gy14) v2	cgybcmoB438
CmoCh09G000710	Melon (DHL92) v3.6.1	cmomedB026
CmoCh09G000710	Silver-seed gourd	carcmoB0144
CmoCh09G000710	Silver-seed gourd	carcmoB0484
CmoCh09G000710	Cucumber (Chinese Long) v3	cmocucB0020
CmoCh09G000710	Watermelon (97103) v2	cmowmbB017
CmoCh09G000710	Wax gourd	cmowgoB0023
CmoCh09G000710	Cucurbita maxima (Rimu)	cmacmoB435
CmoCh09G000710	Cucurbita moschata (Rifu)	cmocmoB017
CmoCh09G000710	Cucumber (Gy14) v1	cgycmoB0742
CmoCh09G000710	Cucurbita maxima (Rimu)	cmacmoB027