CmoCh09G000560 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh09G000560
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cyclin family protein
Location	Cmo_Chr09 : 258209 .. 259887 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTTCTTTCTTTCTCTTTCTGTCTTCTTTCTTTCTTCTGCAATCCGTAACACAGCGCTCACCGTTTTCGGACGATTCTCGGATCTCCGCCCTCGGGTTCAGATCTCGGCCAAACTTCTTCACAGATCGTGCGTAGAGTTGTTCCTAGGTGAATATATCAAGATTTCAGATCTTGATTCACAAAGGAAAACTGTAGATCTGAGAAAACGTTCAAGATCTTACCTGGGTTTTTCCGATTTCTTGATGGAAAATGGGAATCCGGCCACCCACATTCTCTTTTCCCTTCCAAGAAAGGCTCCTTGCACATGGTCTTGACCGGAATGGACTCCGACGGTAGTTTTCGATGAGTCTTCCGGCCGTTCATTCTTCCTCCTCTCTCTAGGTTCTCTCTAACTCGTTTCTCTCACTATTTCTCTTTTGCAGGACTCTTGGGGGTTTCATTTGGACCCCTAAGTGGTAGGAGGGGCAAACTTACCTATTTGCCCCTCTCTCAACTTTTCATCTGGCGAAAGTGGGGCGGAGAGAATCGACGGCAGCGGCGTACGGCGAAGAGAGAGGGAGGGAAATCAATCCGGCTTCTGATAGAAGTTTTTCTAAGTTCTCTCTGCCAGATGAACACAACTCTCCATAATGGTATGATATTGTCCACTTTGAGTATAAGCTCTCGTGGCTTTGCTTTGGCTTCCCCAAATAGCCTTGTTAGCCTTGTTTGTTCTAGGAAGCCACTGGAATCTGCTGCTGAAGATGATTCCATGGGCGACTCAGCAGGGCCAATGTTTGTTCAACATACAGAAGCAATGTTGGACGACATTGACAGAATGGTAAAGATTGAAACCCTTCTCTTTTGGTATTACTACTTGAACTTGCTGCCATTGACGCGATTTCATAACCCACAGCAGAAGTTGGAAATTGAAGATGTAGATGAAGAGGTCATTGATATTGACAGCCTTGATATGAAGGATCCACTTTGTGTTGTGGAGTACATTGATGACTTGTATACACACTACAGGGCGGCCGAGGTAACAATCTTCCAAACAAGACACATTGTGTCTGAAACATAAATCCATGATTGTGTCTGAAACATAAATCCATGTTCGCTTTTTGTTTCTGATCAAGATGTTCCTCCTCCTCGCAGGTTTCTGTCTGTGTTCCACCAAATTACATGGCCCAACAAGTACATATTAATGACAGGATGAGAGGGTTTCTCGTTGACTGGCTAATAATTGAGGTTAGTTTACTAGTATCCTAGTAAGAGTATTGGGAAAGATCAAGTACATTACCTGTTCGAACCCACTGATCTACATAATGTTGTGATATTGTCCAATGTAGATAATGTTCCTTATCTAACTCACGATCCCAAGCTTATTTAATTATCTAAATTCGGACTACTCCCAATAACCCTCAAGCTTTACTTTTATTTATTTATGATTAGTGTAGTTTATGAAGGAACTAACAAAGCATAACATAATGATTGCTTCAAGATTTAAGCTGATGGAAGAGACACTGTACCTAACAGTCAGCCTCATCGATAGATTGTTAGCAGTTCATTCAGTGGCGAAGAAGAATCTCCGGCTAGTTGGAGTGACAGCCATGTTTATAGCCAGCAAGTACGAAGAAGTTTGTTTTCTTGGTATGGACGATTTTATTCAAATATCTGAGAAGTCGCCTTCGGGGTAA

mRNA sequence

TTTTGTTCTTTCTTTCTCTTTCTGTCTTCTTTCTTTCTTCTGCAATCCGTAACACAGCGCTCACCGTTTTCGGACGATTCTCGGATCTCCGCCCTCGGGTTCAGATCTCGGCCAAACTTCTTCACAGATCGTGCGTAGAGTTGTTCCTAGGTGAATATATCAAGATTTCAGATCTTGATTCACAAAGGAAAACTGTAGATCTGAGAAAACGTTCAAGATCTTACCTGGGTTTTTCCGATTTCTTGATGGAAAATGGGAATCCGGCCACCCACATTCTCTTTTCCCTTCCAAGAAAGGCTCCTTGCACATGGTCTTGACCGGAATGGACTCCGACGGACTCTTGGGGGTTTCATTTGGACCCCTAAGTGGTAGGAGGGGCAAACTTACCTATTTGCCCCTCTCTCAACTTTTCATCTGGCGAAAGTGGGGCGGAGAGAATCGACGGCAGCGGCGTACGGCGAAGAGAGAGGGAGGGAAATCAATCCGGCTTCTGATAGAAGTTTTTCTAAGTTCTCTCTGCCAGATGAACACAACTCTCCATAATGGAAGCCACTGGAATCTGCTGCTGAAGATGATTCCATGGGCGACTCAGCAGGGCCAATGTTTGTTCAACATACAGAAGCAATGTTGGACGACATTGACAGAATGGTAAAGATTGAAACCCTTCTCTTTTGGTATTACTACTTGAACTTGCTGCCATTGACGCGATTTCATAACCCACAGCAGAAGTTGGAAATTGAAGATGTAGATGAAGAGGTCATTGATATTGACAGCCTTGATATGAAGGATCCACTTTGTGTTGTGGAGTACATTGATGACTTGTATACACACTACAGGGCGGCCGAGGTTTCTGTCTGTGTTCCACCAAATTACATGGCCCAACAAGTACATATTAATGACAGGATGAGAGGGTTTCTCGTTGACTGGCTAATAATTGAGTTTATGAAGGAACTAACAAAGCATAACATAATGATTGCTTCAAGATTTAAGCTGATGGAAGAGACACTGTACCTAACAGTCAGCCTCATCGATAGATTGTTAGCAGTTCATTCAGTGGCGAAGAAGAATCTCCGGCTAGTTGGAGTGACAGCCATGTTTATAGCCAGCAAGTACGAAGAAGTTTGTTTTCTTGGTATGGACGATTTTATTCAAATATCTGAGAAGTCGCCTTCGGGGTAA

Coding sequence (CDS)

ATGGGCGACTCAGCAGGGCCAATGTTTGTTCAACATACAGAAGCAATGTTGGACGACATTGACAGAATGGTAAAGATTGAAACCCTTCTCTTTTGGTATTACTACTTGAACTTGCTGCCATTGACGCGATTTCATAACCCACAGCAGAAGTTGGAAATTGAAGATGTAGATGAAGAGGTCATTGATATTGACAGCCTTGATATGAAGGATCCACTTTGTGTTGTGGAGTACATTGATGACTTGTATACACACTACAGGGCGGCCGAGGTTTCTGTCTGTGTTCCACCAAATTACATGGCCCAACAAGTACATATTAATGACAGGATGAGAGGGTTTCTCGTTGACTGGCTAATAATTGAGTTTATGAAGGAACTAACAAAGCATAACATAATGATTGCTTCAAGATTTAAGCTGATGGAAGAGACACTGTACCTAACAGTCAGCCTCATCGATAGATTGTTAGCAGTTCATTCAGTGGCGAAGAAGAATCTCCGGCTAGTTGGAGTGACAGCCATGTTTATAGCCAGCAAGTACGAAGAAGTTTGTTTTCTTGGTATGGACGATTTTATTCAAATATCTGAGAAGTCGCCTTCGGGGTAA

Homology

[Close]

BLAST of CmoCh09G000560 vs. Swiss-Prot
Match: CCB23_ARATH (Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2)

HSP 1 Score: 165.2 bits (417), Expect = 7.1e-40
Identity = 94/200 (47.00%), Postives = 124/200 (62.00%), Query Frame = 1


Query: 2   GDSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEE-- 61
           GDS  PMFVQHTEAML++I++M K                        ++E+ED D+E  
Sbjct: 123 GDSNEPMFVQHTEAMLEEIEQMEK------------------------EIEMEDADKEEE 182

Query: 62  -VIDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLI 121
            VIDID+ D  +PL  VEYI D++T Y+  E   CVPPNYM  Q  +N+RMRG L+DWLI
Sbjct: 183 PVIDIDACDKNNPLAAVEYIHDMHTFYKNFEKLSCVPPNYMDNQQDLNERMRGILIDWLI 242

Query: 122 IEFMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKY 181
                        +  +F+LMEETLYLT+++IDR LAVH + +K L+LVGVTA+ +A KY
Sbjct: 243 ------------EVHYKFELMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLACKY 286

Query: 182 EEVCFLGMDDFIQISEKSPS 199
           EEV    +DD I IS+K+ S
Sbjct: 303 EEVSVPVVDDLILISDKAYS 286

[Close]

BLAST of CmoCh09G000560 vs. Swiss-Prot
Match: CCB24_ARATH (Cyclin-B2-4 OS=Arabidopsis thaliana GN=CYCB2-4 PE=2 SV=2)

HSP 1 Score: 165.2 bits (417), Expect = 7.1e-40
Identity = 98/197 (49.75%), Postives = 123/197 (62.44%), Query Frame = 1


Query: 2   GDSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIE-DVDEEV 61
           GD   PMFVQHTEAML++ID+M  IE                    Q   +I+ +V+E V
Sbjct: 120 GDFNEPMFVQHTEAMLEEIDKMEGIEM-------------------QDSNDIDAEVEESV 179

Query: 62  IDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLIIE 121
           +DIDS D  +PL VVEYI+D+Y  Y+  E   CVPPNYM  Q  IN+RMRG L DWL   
Sbjct: 180 MDIDSCDKNNPLSVVEYINDIYCFYKKNECRSCVPPNYMENQHDINERMRGILFDWL--- 239

Query: 122 FMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHS-VAKKNLRLVGVTAMFIASKYE 181
                    I +  +F+LMEETLYLT++LIDR LAVH  +A+K L+LVGVTAM +A KYE
Sbjct: 240 ---------IEVHYKFELMEETLYLTINLIDRFLAVHQHIARKKLQLVGVTAMLLACKYE 285

Query: 182 EVCFLGMDDFIQISEKS 197
           EV    +DD I IS+K+
Sbjct: 300 EVSVPVVDDLILISDKA 285

[Close]

BLAST of CmoCh09G000560 vs. Swiss-Prot
Match: CCNB1_MEDSV (G2/mitotic-specific cyclin-1 OS=Medicago sativa subsp. varia PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.1e-32
Identity = 77/158 (48.73%), Postives = 103/158 (65.19%), Query Frame = 1


Query: 40  PLTRFHNPQQKLEIEDVDEE-VIDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNY 99
           P+    +  +++E+ED+ EE V+DID+ D  DPL V EYI+DLY++YR  E + CV PNY
Sbjct: 134 PMHSESDQMEEVEMEDIMEEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVESTSCVSPNY 193

Query: 100 MAQQVHINDRMRGFLVDWLIIEFMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHS 159
           MAQQ  IN+RMR  LVDWL            I +  +F LM ETL+LTV+LIDR L   S
Sbjct: 194 MAQQFDINERMRAILVDWL------------IEVHDKFDLMHETLFLTVNLIDRFLEKQS 253

Query: 160 VAKKNLRLVGVTAMFIASKYEEVCFLGMDDFIQISEKS 197
           V +K L+LVG+ AM +A KYEEV    + D I IS+++
Sbjct: 254 VVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRA 279

[Close]

BLAST of CmoCh09G000560 vs. Swiss-Prot
Match: CCB22_ARATH (Cyclin-B2-2 OS=Arabidopsis thaliana GN=CYCB2-2 PE=1 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 3.3e-29
Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = 1


Query: 40  PLTRFHNPQQKLEIEDVDEE----VIDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVP 99
           P   F   ++++E+ED++EE    V+DID  D  + L  VEY+ DLY  YR  E   CVP
Sbjct: 131 PYIEFDPMEEEVEMEDMEEEQEEPVLDIDEYDANNSLAAVEYVQDLYDFYRKTERFSCVP 190

Query: 100 PNYMAQQVHINDRMRGFLVDWLIIEFMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLA 159
            +YMAQQ  I+D+MR  L+DWL            I +  +F+LM ETL+LTV+LIDR L+
Sbjct: 191 LDYMAQQFDISDKMRAILIDWL------------IEVHDKFELMNETLFLTVNLIDRFLS 250

Query: 160 VHSVAKKNLRLVGVTAMFIASKYEEVCFLGMDDFIQISEKS 197
             +VA+K L+LVG+ A+ +A KYEEV    ++D + IS+K+
Sbjct: 251 KQAVARKKLQLVGLVALLLACKYEEVSVPIVEDLVVISDKA 279

[Close]

BLAST of CmoCh09G000560 vs. Swiss-Prot
Match: CCNB2_MEDSV (G2/mitotic-specific cyclin-2 OS=Medicago sativa subsp. varia PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.3e-29
Identity = 79/195 (40.51%), Postives = 111/195 (56.92%), Query Frame = 1


Query: 3   DSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEEVI- 62
           D   PM ++HTE M  D                    PL       +++E+ED++ E+I 
Sbjct: 126 DQPEPMTLEHTEPMHSD--------------------PLE-----MEEVEMEDIEGEMIL 185

Query: 63  DIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLIIEF 122
           DIDS D  + L VVEYI+DL+ +YR  E   CV P YM +Q+ +N+RMR  LVDWLI   
Sbjct: 186 DIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSPTYMDEQLDLNERMRAILVDWLI--- 245

Query: 123 MKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKYEEV 182
                     +  +F LM+ETL+LTV+LIDR LA  +V +K L+LVG+ AM +A KYEEV
Sbjct: 246 ---------EVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEV 283

Query: 183 CFLGMDDFIQISEKS 197
               + D I I++++
Sbjct: 306 SVPVVSDLIHIADRA 283

[Close]

BLAST of CmoCh09G000560 vs. TrEMBL
Match: A0A0A0L1C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G658580 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 7.9e-46
Identity = 111/199 (55.78%), Postives = 132/199 (66.33%), Query Frame = 1


Query: 1   MGDSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEE- 60
           MG+SA PMFVQHTEAMLD+IDRM                         +++E+ED++EE 
Sbjct: 132 MGESAVPMFVQHTEAMLDEIDRM-------------------------EEVEMEDIEEEP 191

Query: 61  VIDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLII 120
           V DIDS D  D L VVEYIDDLY +YR +EVS CV PNYMAQQ  IN+RMRG L+DWL  
Sbjct: 192 VTDIDSRDKSDQLAVVEYIDDLYAYYRKSEVSGCVSPNYMAQQADINERMRGILIDWL-- 251

Query: 121 EFMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKYE 180
                     I +  +F+LMEETLYLTV+LIDR LAVHSV +K L+LVGVTAM IA KYE
Sbjct: 252 ----------IEVHYKFELMEETLYLTVNLIDRFLAVHSVVRKKLQLVGVTAMLIACKYE 293

Query: 181 EVCFLGMDDFIQISEKSPS 199
           EV    +DD I IS+K+ S
Sbjct: 312 EVSVPVVDDLILISDKAYS 293

[Close]

BLAST of CmoCh09G000560 vs. TrEMBL
Match: B9H5H8_POPTR (Cyclin family protein OS=Populus trichocarpa GN=POPTR_0005s27280g PE=3 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 4.8e-43
Identity = 105/197 (53.30%), Postives = 127/197 (64.47%), Query Frame = 1


Query: 3   DSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEE-VI 62
           D + P FVQHTEAML++IDRM                          ++E+EDV+EE V+
Sbjct: 130 DFSAPTFVQHTEAMLEEIDRM-------------------------DEVEMEDVEEEPVL 189

Query: 63  DIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLIIEF 122
           DID  D +DPL VVEYIDDLY  Y+ AE S CVPPNYMAQQ  INDRMRG L+DWL    
Sbjct: 190 DIDGCDKRDPLAVVEYIDDLYNFYKKAERSGCVPPNYMAQQFDINDRMRGILIDWL---- 249

Query: 123 MKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKYEEV 182
                   I +  +F+LMEETLYLTV+LIDR LAVH V +K L+LVGVTAM +A KYEEV
Sbjct: 250 --------IEVHYKFELMEETLYLTVNLIDRFLAVHPVVRKKLQLVGVTAMLLACKYEEV 289

Query: 183 CFLGMDDFIQISEKSPS 199
               ++D I IS+K+ S
Sbjct: 310 SVPVVEDLILISDKAYS 289

[Close]

BLAST of CmoCh09G000560 vs. TrEMBL
Match: A0A067KP83_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08084 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.3e-42
Identity = 103/196 (52.55%), Postives = 127/196 (64.80%), Query Frame = 1


Query: 3   DSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEEVID 62
           D + PMFVQHTEAML++IDRM                          ++E+EDVDE ++D
Sbjct: 127 DFSAPMFVQHTEAMLEEIDRM-------------------------DEVEMEDVDE-MVD 186

Query: 63  IDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLIIEFM 122
           ID  D K+PL VVEYIDDLY  Y+ AE S CV PNYM QQ  IN+RMRG L+DWL     
Sbjct: 187 IDLCDKKNPLAVVEYIDDLYAFYKKAEKSSCVSPNYMTQQFDINERMRGILIDWL----- 246

Query: 123 KELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKYEEVC 182
                  I +  +F+LM+ETLYLTV+LIDR LAVHSVA+K L+LVGVTAM +A KYEEV 
Sbjct: 247 -------IEVHYKFELMDETLYLTVNLIDRFLAVHSVARKKLQLVGVTAMLLACKYEEVS 284

Query: 183 FLGMDDFIQISEKSPS 199
              ++D I IS+K+ S
Sbjct: 307 VPVVEDLILISDKAYS 284

[Close]

BLAST of CmoCh09G000560 vs. TrEMBL
Match: B9R8N2_RICCO (Cyclin B, putative OS=Ricinus communis GN=RCOM_1601010 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41
Identity = 103/198 (52.02%), Postives = 128/198 (64.65%), Query Frame = 1


Query: 2   GDSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEE-V 61
           GD + PMFVQHTEAML++IDRM                         +++E+EDV EE  
Sbjct: 131 GDFSVPMFVQHTEAMLEEIDRM-------------------------EEVEMEDVVEEPF 190

Query: 62  IDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLIIE 121
           +DIDS D K+PL VVEYIDDLY  YR AE+S C P NYM+QQ  IN+RMRG L+DWL   
Sbjct: 191 MDIDSYDKKNPLAVVEYIDDLYNFYRKAELSSCAPSNYMSQQSDINERMRGILIDWL--- 250

Query: 122 FMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKYEE 181
                    I +  +F+LM+ETLYLTV+LIDR LAVH V +K L+LVGVTAM +A KYEE
Sbjct: 251 ---------IEVHYKFELMDETLYLTVNLIDRFLAVHPVVRKKLQLVGVTAMLLACKYEE 291

Query: 182 VCFLGMDDFIQISEKSPS 199
           V    ++D I IS+K+ S
Sbjct: 311 VSVPVVEDLILISDKAYS 291

[Close]

BLAST of CmoCh09G000560 vs. TrEMBL
Match: A0A061FDY6_THECC (Cyclin b2,4 isoform 3 OS=Theobroma cacao GN=TCM_034388 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-41
Identity = 104/197 (52.79%), Postives = 126/197 (63.96%), Query Frame = 1


Query: 3   DSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEE-VI 62
           DS  PMFVQHTEAML++IDRM                         +++E+EDVDEE  +
Sbjct: 128 DSDVPMFVQHTEAMLEEIDRM-------------------------EEVEMEDVDEEPFL 187

Query: 63  DIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLIIEF 122
           DID  D K+PL VVEYIDDLY  YR AE + CVPPNYMA Q  IN+RMRG L+DWL    
Sbjct: 188 DIDICDKKNPLAVVEYIDDLYKFYRKAECTGCVPPNYMALQCDINERMRGILIDWL---- 247

Query: 123 MKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKYEEV 182
                   I +  +F+LMEETLYLTV+LIDR LAV  V +K L+LVGVTAM +A KYEEV
Sbjct: 248 --------IEVHYKFELMEETLYLTVNLIDRFLAVQQVVRKKLQLVGVTAMLLACKYEEV 287

Query: 183 CFLGMDDFIQISEKSPS 199
               ++D I IS+K+ S
Sbjct: 308 SVPVVEDLILISDKAYS 287

[Close]

BLAST of CmoCh09G000560 vs. TAIR10
Match: AT1G20610.1 (AT1G20610.1 Cyclin B2;3)

HSP 1 Score: 165.2 bits (417), Expect = 4.0e-41
Identity = 94/200 (47.00%), Postives = 124/200 (62.00%), Query Frame = 1


Query: 2   GDSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEE-- 61
           GDS  PMFVQHTEAML++I++M K                        ++E+ED D+E  
Sbjct: 123 GDSNEPMFVQHTEAMLEEIEQMEK------------------------EIEMEDADKEEE 182

Query: 62  -VIDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLI 121
            VIDID+ D  +PL  VEYI D++T Y+  E   CVPPNYM  Q  +N+RMRG L+DWLI
Sbjct: 183 PVIDIDACDKNNPLAAVEYIHDMHTFYKNFEKLSCVPPNYMDNQQDLNERMRGILIDWLI 242

Query: 122 IEFMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKY 181
                        +  +F+LMEETLYLT+++IDR LAVH + +K L+LVGVTA+ +A KY
Sbjct: 243 ------------EVHYKFELMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLACKY 286

Query: 182 EEVCFLGMDDFIQISEKSPS 199
           EEV    +DD I IS+K+ S
Sbjct: 303 EEVSVPVVDDLILISDKAYS 286

[Close]

BLAST of CmoCh09G000560 vs. TAIR10
Match: AT1G76310.1 (AT1G76310.1 CYCLIN B2;4)

HSP 1 Score: 165.2 bits (417), Expect = 4.0e-41
Identity = 98/197 (49.75%), Postives = 123/197 (62.44%), Query Frame = 1


Query: 2   GDSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIE-DVDEEV 61
           GD   PMFVQHTEAML++ID+M  IE                    Q   +I+ +V+E V
Sbjct: 120 GDFNEPMFVQHTEAMLEEIDKMEGIEM-------------------QDSNDIDAEVEESV 179

Query: 62  IDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLIIE 121
           +DIDS D  +PL VVEYI+D+Y  Y+  E   CVPPNYM  Q  IN+RMRG L DWL   
Sbjct: 180 MDIDSCDKNNPLSVVEYINDIYCFYKKNECRSCVPPNYMENQHDINERMRGILFDWL--- 239

Query: 122 FMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHS-VAKKNLRLVGVTAMFIASKYE 181
                    I +  +F+LMEETLYLT++LIDR LAVH  +A+K L+LVGVTAM +A KYE
Sbjct: 240 ---------IEVHYKFELMEETLYLTINLIDRFLAVHQHIARKKLQLVGVTAMLLACKYE 285

Query: 182 EVCFLGMDDFIQISEKS 197
           EV    +DD I IS+K+
Sbjct: 300 EVSVPVVDDLILISDKA 285

[Close]

BLAST of CmoCh09G000560 vs. TAIR10
Match: AT4G35620.1 (AT4G35620.1 Cyclin B2;2)

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-30
Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = 1


Query: 40  PLTRFHNPQQKLEIEDVDEE----VIDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVP 99
           P   F   ++++E+ED++EE    V+DID  D  + L  VEY+ DLY  YR  E   CVP
Sbjct: 131 PYIEFDPMEEEVEMEDMEEEQEEPVLDIDEYDANNSLAAVEYVQDLYDFYRKTERFSCVP 190

Query: 100 PNYMAQQVHINDRMRGFLVDWLIIEFMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLA 159
            +YMAQQ  I+D+MR  L+DWL            I +  +F+LM ETL+LTV+LIDR L+
Sbjct: 191 LDYMAQQFDISDKMRAILIDWL------------IEVHDKFELMNETLFLTVNLIDRFLS 250

Query: 160 VHSVAKKNLRLVGVTAMFIASKYEEVCFLGMDDFIQISEKS 197
             +VA+K L+LVG+ A+ +A KYEEV    ++D + IS+K+
Sbjct: 251 KQAVARKKLQLVGLVALLLACKYEEVSVPIVEDLVVISDKA 279

[Close]

BLAST of CmoCh09G000560 vs. TAIR10
Match: AT2G17620.1 (AT2G17620.1 Cyclin B2;1)

HSP 1 Score: 128.3 bits (321), Expect = 5.4e-30
Identity = 67/153 (43.79%), Postives = 100/153 (65.36%), Query Frame = 1


Query: 46  NPQQKLEIEDV--DEEVIDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQV 105
           +P +++E+EDV  +E ++DID LD K+ L  VEY+ DLY  YR  E   CVP +YM QQ+
Sbjct: 138 DPMEEVEMEDVTVEEPIVDIDVLDSKNSLAAVEYVQDLYAFYRTMERFSCVPVDYMMQQI 197

Query: 106 HINDRMRGFLVDWLIIEFMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKN 165
            +N++MR  L+DWL            I +  +F L+ ETL+LTV+LIDR L+  +V +K 
Sbjct: 198 DLNEKMRAILIDWL------------IEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKK 257

Query: 166 LRLVGVTAMFIASKYEEVCFLGMDDFIQISEKS 197
           L+LVG+ A+ +A KYEEV    ++D + IS+K+
Sbjct: 258 LQLVGLVALLLACKYEEVSVPVVEDLVLISDKA 278

[Close]

BLAST of CmoCh09G000560 vs. TAIR10
Match: AT4G37490.1 (AT4G37490.1 CYCLIN B1;1)

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22
Identity = 56/141 (39.72%), Postives = 93/141 (65.96%), Query Frame = 1


Query: 58  EEVIDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWL 117
           E+++DIDS D+++ L  VEY++D+Y+ Y++ E S   P +YMA Q  IN++MR  LV+WL
Sbjct: 146 EKIVDIDSADVENDLAAVEYVEDIYSFYKSVE-SEWRPRDYMASQPDINEKMRLILVEWL 205

Query: 118 IIEFMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASK 177
           I             +  RF+L  ET YLTV+++DR L+V  V +K L+LVG++A+ +++K
Sbjct: 206 ID------------VHVRFELNPETFYLTVNILDRFLSVKPVPRKELQLVGLSALLMSAK 265

Query: 178 YEEVCFLGMDDFIQISEKSPS 199
           YEE+    ++D + I++ + S
Sbjct: 266 YEEIWPPQVEDLVDIADHAYS 273

[Close]

BLAST of CmoCh09G000560 vs. NCBI nr
Match: gi|659104678|ref|XP_008452954.1| (PREDICTED: G2/mitotic-specific cyclin-2-like [Cucumis melo])

HSP 1 Score: 193.7 bits (491), Expect = 3.0e-46
Identity = 112/199 (56.28%), Postives = 133/199 (66.83%), Query Frame = 1


Query: 1   MGDSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEE- 60
           MG+SA PMFVQHTEAMLD+IDRM                         +++E+ED++EE 
Sbjct: 132 MGESAVPMFVQHTEAMLDEIDRM-------------------------EEVEMEDIEEEP 191

Query: 61  VIDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLII 120
           VIDIDS D  D L VVEYIDDLY +YR +EVS CV PNYMAQQ  IN+RMRG L+DWL  
Sbjct: 192 VIDIDSRDKSDQLAVVEYIDDLYAYYRKSEVSGCVSPNYMAQQADINERMRGILIDWL-- 251

Query: 121 EFMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKYE 180
                     I +  +F+LMEETLYLTV+LIDR LAVHSV +K L+LVGVTAM IA KYE
Sbjct: 252 ----------IEVHYKFELMEETLYLTVNLIDRFLAVHSVVRKKLQLVGVTAMLIACKYE 293

Query: 181 EVCFLGMDDFIQISEKSPS 199
           EV    +DD I IS+K+ S
Sbjct: 312 EVSVPVVDDLILISDKAYS 293

[Close]

BLAST of CmoCh09G000560 vs. NCBI nr
Match: gi|449455599|ref|XP_004145540.1| (PREDICTED: G2/mitotic-specific cyclin-2-like [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45
Identity = 111/199 (55.78%), Postives = 132/199 (66.33%), Query Frame = 1


Query: 1   MGDSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEE- 60
           MG+SA PMFVQHTEAMLD+IDRM                         +++E+ED++EE 
Sbjct: 132 MGESAVPMFVQHTEAMLDEIDRM-------------------------EEVEMEDIEEEP 191

Query: 61  VIDIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLII 120
           V DIDS D  D L VVEYIDDLY +YR +EVS CV PNYMAQQ  IN+RMRG L+DWL  
Sbjct: 192 VTDIDSRDKSDQLAVVEYIDDLYAYYRKSEVSGCVSPNYMAQQADINERMRGILIDWL-- 251

Query: 121 EFMKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKYE 180
                     I +  +F+LMEETLYLTV+LIDR LAVHSV +K L+LVGVTAM IA KYE
Sbjct: 252 ----------IEVHYKFELMEETLYLTVNLIDRFLAVHSVVRKKLQLVGVTAMLIACKYE 293

Query: 181 EVCFLGMDDFIQISEKSPS 199
           EV    +DD I IS+K+ S
Sbjct: 312 EVSVPVVDDLILISDKAYS 293

[Close]

BLAST of CmoCh09G000560 vs. NCBI nr
Match: gi|743895909|ref|XP_011041231.1| (PREDICTED: cyclin-B2-4-like isoform X2 [Populus euphratica])

HSP 1 Score: 182.6 bits (462), Expect = 6.9e-43
Identity = 105/197 (53.30%), Postives = 127/197 (64.47%), Query Frame = 1


Query: 3   DSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEE-VI 62
           D + P FVQHTEAML++IDRM                          ++E+EDV+EE V+
Sbjct: 130 DFSAPTFVQHTEAMLEEIDRM-------------------------DEVEMEDVEEEPVL 189

Query: 63  DIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLIIEF 122
           DID  D +DPL VVEYIDDLY  Y+ AE S CVPPNYMAQQ  INDRMRG L+DWL    
Sbjct: 190 DIDGCDKRDPLAVVEYIDDLYNFYKKAERSGCVPPNYMAQQFDINDRMRGILIDWL---- 249

Query: 123 MKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKYEEV 182
                   I +  +F+LMEETLYLTV+LIDR LAVH V +K L+LVGVTAM +A KYEEV
Sbjct: 250 --------IEVHYKFELMEETLYLTVNLIDRFLAVHPVVRKKLQLVGVTAMLLACKYEEV 289

Query: 183 CFLGMDDFIQISEKSPS 199
               ++D I IS+K+ S
Sbjct: 310 SVPVVEDLILISDKAYS 289

[Close]

BLAST of CmoCh09G000560 vs. NCBI nr
Match: gi|566173505|ref|XP_002307791.2| (cyclin family protein [Populus trichocarpa])

HSP 1 Score: 182.6 bits (462), Expect = 6.9e-43
Identity = 105/197 (53.30%), Postives = 127/197 (64.47%), Query Frame = 1


Query: 3   DSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEE-VI 62
           D + P FVQHTEAML++IDRM                          ++E+EDV+EE V+
Sbjct: 130 DFSAPTFVQHTEAMLEEIDRM-------------------------DEVEMEDVEEEPVL 189

Query: 63  DIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLIIEF 122
           DID  D +DPL VVEYIDDLY  Y+ AE S CVPPNYMAQQ  INDRMRG L+DWL    
Sbjct: 190 DIDGCDKRDPLAVVEYIDDLYNFYKKAERSGCVPPNYMAQQFDINDRMRGILIDWL---- 249

Query: 123 MKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKYEEV 182
                   I +  +F+LMEETLYLTV+LIDR LAVH V +K L+LVGVTAM +A KYEEV
Sbjct: 250 --------IEVHYKFELMEETLYLTVNLIDRFLAVHPVVRKKLQLVGVTAMLLACKYEEV 289

Query: 183 CFLGMDDFIQISEKSPS 199
               ++D I IS+K+ S
Sbjct: 310 SVPVVEDLILISDKAYS 289

[Close]

BLAST of CmoCh09G000560 vs. NCBI nr
Match: gi|743895911|ref|XP_011041232.1| (PREDICTED: G2/mitotic-specific cyclin-2-like isoform X3 [Populus euphratica])

HSP 1 Score: 182.6 bits (462), Expect = 6.9e-43
Identity = 105/197 (53.30%), Postives = 127/197 (64.47%), Query Frame = 1


Query: 3   DSAGPMFVQHTEAMLDDIDRMVKIETLLFWYYYLNLLPLTRFHNPQQKLEIEDVDEE-VI 62
           D + P FVQHTEAML++IDRM                          ++E+EDV+EE V+
Sbjct: 111 DFSAPTFVQHTEAMLEEIDRM-------------------------DEVEMEDVEEEPVL 170

Query: 63  DIDSLDMKDPLCVVEYIDDLYTHYRAAEVSVCVPPNYMAQQVHINDRMRGFLVDWLIIEF 122
           DID  D +DPL VVEYIDDLY  Y+ AE S CVPPNYMAQQ  INDRMRG L+DWL    
Sbjct: 171 DIDGCDKRDPLAVVEYIDDLYNFYKKAERSGCVPPNYMAQQFDINDRMRGILIDWL---- 230

Query: 123 MKELTKHNIMIASRFKLMEETLYLTVSLIDRLLAVHSVAKKNLRLVGVTAMFIASKYEEV 182
                   I +  +F+LMEETLYLTV+LIDR LAVH V +K L+LVGVTAM +A KYEEV
Sbjct: 231 --------IEVHYKFELMEETLYLTVNLIDRFLAVHPVVRKKLQLVGVTAMLLACKYEEV 270

Query: 183 CFLGMDDFIQISEKSPS 199
               ++D I IS+K+ S
Sbjct: 291 SVPVVEDLILISDKAYS 270

The following BLAST results are available for this feature:

BLAST of CmoCh09G000560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCB23_ARATH	7.1e-40	47.00	Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2	[more]
CCB24_ARATH	7.1e-40	49.75	Cyclin-B2-4 OS=Arabidopsis thaliana GN=CYCB2-4 PE=2 SV=2	[more]
CCNB1_MEDSV	7.1e-32	48.73	G2/mitotic-specific cyclin-1 OS=Medicago sativa subsp. varia PE=2 SV=1	[more]
CCB22_ARATH	3.3e-29	44.10	Cyclin-B2-2 OS=Arabidopsis thaliana GN=CYCB2-2 PE=1 SV=2	[more]
CCNB2_MEDSV	3.3e-29	40.51	G2/mitotic-specific cyclin-2 OS=Medicago sativa subsp. varia PE=2 SV=1	[more]

BLAST of CmoCh09G000560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1C5_CUCSA	7.9e-46	55.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G658580 PE=3 SV=1	[more]
B9H5H8_POPTR	4.8e-43	53.30	Cyclin family protein OS=Populus trichocarpa GN=POPTR_0005s27280g PE=3 SV=2	[more]
A0A067KP83_JATCU	5.3e-42	52.55	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08084 PE=3 SV=1	[more]
B9R8N2_RICCO	1.5e-41	52.02	Cyclin B, putative OS=Ricinus communis GN=RCOM_1601010 PE=3 SV=1	[more]
A0A061FDY6_THECC	2.0e-41	52.79	Cyclin b2,4 isoform 3 OS=Theobroma cacao GN=TCM_034388 PE=3 SV=1	[more]

BLAST of CmoCh09G000560 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20610.1	4.0e-41	47.00	Cyclin B2;3	[more]
AT1G76310.1	4.0e-41	49.75	CYCLIN B2;4	[more]
AT4G35620.1	1.9e-30	44.10	Cyclin B2;2	[more]
AT2G17620.1	5.4e-30	43.79	Cyclin B2;1	[more]
AT4G37490.1	1.4e-22	39.72	CYCLIN B1;1	[more]

BLAST of CmoCh09G000560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659104678\|ref\|XP_008452954.1\|	3.0e-46	56.28	PREDICTED: G2/mitotic-specific cyclin-2-like [Cucumis melo]	[more]
gi\|449455599\|ref\|XP_004145540.1\|	1.1e-45	55.78	PREDICTED: G2/mitotic-specific cyclin-2-like [Cucumis sativus]	[more]
gi\|743895909\|ref\|XP_011041231.1\|	6.9e-43	53.30	PREDICTED: cyclin-B2-4-like isoform X2 [Populus euphratica]	[more]
gi\|566173505\|ref\|XP_002307791.2\|	6.9e-43	53.30	cyclin family protein [Populus trichocarpa]	[more]
gi\|743895911\|ref\|XP_011041232.1\|	6.9e-43	53.30	PREDICTED: G2/mitotic-specific cyclin-2-like isoform X3 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006671	Cyclin_N
IPR013763	Cyclin-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G000560.1	CmoCh09G000560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 80..195 score: 3.1
IPR013763	Cyclin-like	GENE3D	G3DSA:1.10.472.10		coord: 96..196 score: 1.2
IPR013763	Cyclin-like	unknown	SSF47954	Cyclin-like	coord: 69..194 score: 4.42
None	No IPR available	PANTHER	PTHR10177	CYCLINE	coord: 59..195 score: 1.3E-63coord: 3..29 score: 1.3
None	No IPR available	PANTHER	PTHR10177:SF250	CYCLIN-B2-3-RELATED	coord: 59..195 score: 1.3E-63coord: 3..29 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh09G000560	CmaCh09G000550	Cucurbita maxima (Rimu)	cmacmoB027
CmoCh09G000560	Lsi04G018040	Bottle gourd (USVL1VR-Ls)	cmolsiB012
CmoCh09G000560	Cp4.1LG02g08400	Cucurbita pepo (Zucchini)	cmocpeB020
CmoCh09G000560	Cp4.1LG06g00260	Cucurbita pepo (Zucchini)	cmocpeB034
CmoCh09G000560	MELO3C017022.2	Melon (DHL92) v3.6.1	cmomedB026
CmoCh09G000560	CsaV3_4G037240	Cucumber (Chinese Long) v3	cmocucB0020
CmoCh09G000560	Cla97C11G224820	Watermelon (97103) v2	cmowmbB010
CmoCh09G000560	Bhi09G002398	Wax gourd	cmowgoB0023
CmoCh09G000560	CsGy4G025220	Cucumber (Gy14) v2	cgybcmoB438
CmoCh09G000560	Carg08631	Silver-seed gourd	carcmoB0144
CmoCh09G000560	Carg21374	Silver-seed gourd	carcmoB0484

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh09G000560	CmoCh01G020690	Cucurbita moschata (Rifu)	cmocmoB017

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh09G000560	Cucumber (Chinese Long) v2	cmocuB015
CmoCh09G000560	Melon (DHL92) v3.5.1	cmomeB026
CmoCh09G000560	Watermelon (Charleston Gray)	cmowcgB010
CmoCh09G000560	Watermelon (97103) v1	cmowmB031
CmoCh09G000560	Cucurbita maxima (Rimu)	cmacmoB435
CmoCh09G000560	Cucumber (Gy14) v1	cgycmoB0742
CmoCh09G000560	Wild cucumber (PI 183967)	cmocpiB016