CmoCh09G000560 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTGTTCTTTCTTTCTCTTTCTGTCTTCTTTCTTTCTTCTGCAATCCGTAACACAGCGCTCACCGTTTTCGGACGATTCTCGGATCTCCGCCCTCGGGTTCAGATCTCGGCCAAACTTCTTCACAGATCGTGCGTAGAGTTGTTCCTAGGTGAATATATCAAGATTTCAGATCTTGATTCACAAAGGAAAACTGTAGATCTGAGAAAACGTTCAAGATCTTACCTGGGTTTTTCCGATTTCTTGATGGAAAATGGGAATCCGGCCACCCACATTCTCTTTTCCCTTCCAAGAAAGGCTCCTTGCACATGGTCTTGACCGGAATGGACTCCGACGGTAGTTTTCGATGAGTCTTCCGGCCGTTCATTCTTCCTCCTCTCTCTAGGTTCTCTCTAACTCGTTTCTCTCACTATTTCTCTTTTGCAGGACTCTTGGGGGTTTCATTTGGACCCCTAAGTGGTAGGAGGGGCAAACTTACCTATTTGCCCCTCTCTCAACTTTTCATCTGGCGAAAGTGGGGCGGAGAGAATCGACGGCAGCGGCGTACGGCGAAGAGAGAGGGAGGGAAATCAATCCGGCTTCTGATAGAAGTTTTTCTAAGTTCTCTCTGCCAGATGAACACAACTCTCCATAATGGTATGATATTGTCCACTTTGAGTATAAGCTCTCGTGGCTTTGCTTTGGCTTCCCCAAATAGCCTTGTTAGCCTTGTTTGTTCTAGGAAGCCACTGGAATCTGCTGCTGAAGATGATTCCATGGGCGACTCAGCAGGGCCAATGTTTGTTCAACATACAGAAGCAATGTTGGACGACATTGACAGAATGGTAAAGATTGAAACCCTTCTCTTTTGGTATTACTACTTGAACTTGCTGCCATTGACGCGATTTCATAACCCACAGCAGAAGTTGGAAATTGAAGATGTAGATGAAGAGGTCATTGATATTGACAGCCTTGATATGAAGGATCCACTTTGTGTTGTGGAGTACATTGATGACTTGTATACACACTACAGGGCGGCCGAGGTAACAATCTTCCAAACAAGACACATTGTGTCTGAAACATAAATCCATGATTGTGTCTGAAACATAAATCCATGTTCGCTTTTTGTTTCTGATCAAGATGTTCCTCCTCCTCGCAGGTTTCTGTCTGTGTTCCACCAAATTACATGGCCCAACAAGTACATATTAATGACAGGATGAGAGGGTTTCTCGTTGACTGGCTAATAATTGAGGTTAGTTTACTAGTATCCTAGTAAGAGTATTGGGAAAGATCAAGTACATTACCTGTTCGAACCCACTGATCTACATAATGTTGTGATATTGTCCAATGTAGATAATGTTCCTTATCTAACTCACGATCCCAAGCTTATTTAATTATCTAAATTCGGACTACTCCCAATAACCCTCAAGCTTTACTTTTATTTATTTATGATTAGTGTAGTTTATGAAGGAACTAACAAAGCATAACATAATGATTGCTTCAAGATTTAAGCTGATGGAAGAGACACTGTACCTAACAGTCAGCCTCATCGATAGATTGTTAGCAGTTCATTCAGTGGCGAAGAAGAATCTCCGGCTAGTTGGAGTGACAGCCATGTTTATAGCCAGCAAGTACGAAGAAGTTTGTTTTCTTGGTATGGACGATTTTATTCAAATATCTGAGAAGTCGCCTTCGGGGTAA TTTTGTTCTTTCTTTCTCTTTCTGTCTTCTTTCTTTCTTCTGCAATCCGTAACACAGCGCTCACCGTTTTCGGACGATTCTCGGATCTCCGCCCTCGGGTTCAGATCTCGGCCAAACTTCTTCACAGATCGTGCGTAGAGTTGTTCCTAGGTGAATATATCAAGATTTCAGATCTTGATTCACAAAGGAAAACTGTAGATCTGAGAAAACGTTCAAGATCTTACCTGGGTTTTTCCGATTTCTTGATGGAAAATGGGAATCCGGCCACCCACATTCTCTTTTCCCTTCCAAGAAAGGCTCCTTGCACATGGTCTTGACCGGAATGGACTCCGACGGACTCTTGGGGGTTTCATTTGGACCCCTAAGTGGTAGGAGGGGCAAACTTACCTATTTGCCCCTCTCTCAACTTTTCATCTGGCGAAAGTGGGGCGGAGAGAATCGACGGCAGCGGCGTACGGCGAAGAGAGAGGGAGGGAAATCAATCCGGCTTCTGATAGAAGTTTTTCTAAGTTCTCTCTGCCAGATGAACACAACTCTCCATAATGGAAGCCACTGGAATCTGCTGCTGAAGATGATTCCATGGGCGACTCAGCAGGGCCAATGTTTGTTCAACATACAGAAGCAATGTTGGACGACATTGACAGAATGGTAAAGATTGAAACCCTTCTCTTTTGGTATTACTACTTGAACTTGCTGCCATTGACGCGATTTCATAACCCACAGCAGAAGTTGGAAATTGAAGATGTAGATGAAGAGGTCATTGATATTGACAGCCTTGATATGAAGGATCCACTTTGTGTTGTGGAGTACATTGATGACTTGTATACACACTACAGGGCGGCCGAGGTTTCTGTCTGTGTTCCACCAAATTACATGGCCCAACAAGTACATATTAATGACAGGATGAGAGGGTTTCTCGTTGACTGGCTAATAATTGAGTTTATGAAGGAACTAACAAAGCATAACATAATGATTGCTTCAAGATTTAAGCTGATGGAAGAGACACTGTACCTAACAGTCAGCCTCATCGATAGATTGTTAGCAGTTCATTCAGTGGCGAAGAAGAATCTCCGGCTAGTTGGAGTGACAGCCATGTTTATAGCCAGCAAGTACGAAGAAGTTTGTTTTCTTGGTATGGACGATTTTATTCAAATATCTGAGAAGTCGCCTTCGGGGTAA ATGGGCGACTCAGCAGGGCCAATGTTTGTTCAACATACAGAAGCAATGTTGGACGACATTGACAGAATGGTAAAGATTGAAACCCTTCTCTTTTGGTATTACTACTTGAACTTGCTGCCATTGACGCGATTTCATAACCCACAGCAGAAGTTGGAAATTGAAGATGTAGATGAAGAGGTCATTGATATTGACAGCCTTGATATGAAGGATCCACTTTGTGTTGTGGAGTACATTGATGACTTGTATACACACTACAGGGCGGCCGAGGTTTCTGTCTGTGTTCCACCAAATTACATGGCCCAACAAGTACATATTAATGACAGGATGAGAGGGTTTCTCGTTGACTGGCTAATAATTGAGTTTATGAAGGAACTAACAAAGCATAACATAATGATTGCTTCAAGATTTAAGCTGATGGAAGAGACACTGTACCTAACAGTCAGCCTCATCGATAGATTGTTAGCAGTTCATTCAGTGGCGAAGAAGAATCTCCGGCTAGTTGGAGTGACAGCCATGTTTATAGCCAGCAAGTACGAAGAAGTTTGTTTTCTTGGTATGGACGATTTTATTCAAATATCTGAGAAGTCGCCTTCGGGGTAA
BLAST of CmoCh09G000560 vs. Swiss-Prot
Match: CCB23_ARATH (Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2) HSP 1 Score: 165.2 bits (417), Expect = 7.1e-40 Identity = 94/200 (47.00%), Postives = 124/200 (62.00%), Query Frame = 1
BLAST of CmoCh09G000560 vs. Swiss-Prot
Match: CCB24_ARATH (Cyclin-B2-4 OS=Arabidopsis thaliana GN=CYCB2-4 PE=2 SV=2) HSP 1 Score: 165.2 bits (417), Expect = 7.1e-40 Identity = 98/197 (49.75%), Postives = 123/197 (62.44%), Query Frame = 1
BLAST of CmoCh09G000560 vs. Swiss-Prot
Match: CCNB1_MEDSV (G2/mitotic-specific cyclin-1 OS=Medicago sativa subsp. varia PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 7.1e-32 Identity = 77/158 (48.73%), Postives = 103/158 (65.19%), Query Frame = 1
BLAST of CmoCh09G000560 vs. Swiss-Prot
Match: CCB22_ARATH (Cyclin-B2-2 OS=Arabidopsis thaliana GN=CYCB2-2 PE=1 SV=2) HSP 1 Score: 129.8 bits (325), Expect = 3.3e-29 Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = 1
BLAST of CmoCh09G000560 vs. Swiss-Prot
Match: CCNB2_MEDSV (G2/mitotic-specific cyclin-2 OS=Medicago sativa subsp. varia PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.3e-29 Identity = 79/195 (40.51%), Postives = 111/195 (56.92%), Query Frame = 1
BLAST of CmoCh09G000560 vs. TrEMBL
Match: A0A0A0L1C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G658580 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 7.9e-46 Identity = 111/199 (55.78%), Postives = 132/199 (66.33%), Query Frame = 1
BLAST of CmoCh09G000560 vs. TrEMBL
Match: B9H5H8_POPTR (Cyclin family protein OS=Populus trichocarpa GN=POPTR_0005s27280g PE=3 SV=2) HSP 1 Score: 182.6 bits (462), Expect = 4.8e-43 Identity = 105/197 (53.30%), Postives = 127/197 (64.47%), Query Frame = 1
BLAST of CmoCh09G000560 vs. TrEMBL
Match: A0A067KP83_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08084 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 5.3e-42 Identity = 103/196 (52.55%), Postives = 127/196 (64.80%), Query Frame = 1
BLAST of CmoCh09G000560 vs. TrEMBL
Match: B9R8N2_RICCO (Cyclin B, putative OS=Ricinus communis GN=RCOM_1601010 PE=3 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41 Identity = 103/198 (52.02%), Postives = 128/198 (64.65%), Query Frame = 1
BLAST of CmoCh09G000560 vs. TrEMBL
Match: A0A061FDY6_THECC (Cyclin b2,4 isoform 3 OS=Theobroma cacao GN=TCM_034388 PE=3 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.0e-41 Identity = 104/197 (52.79%), Postives = 126/197 (63.96%), Query Frame = 1
BLAST of CmoCh09G000560 vs. TAIR10
Match: AT1G20610.1 (AT1G20610.1 Cyclin B2;3) HSP 1 Score: 165.2 bits (417), Expect = 4.0e-41 Identity = 94/200 (47.00%), Postives = 124/200 (62.00%), Query Frame = 1
BLAST of CmoCh09G000560 vs. TAIR10
Match: AT1G76310.1 (AT1G76310.1 CYCLIN B2;4) HSP 1 Score: 165.2 bits (417), Expect = 4.0e-41 Identity = 98/197 (49.75%), Postives = 123/197 (62.44%), Query Frame = 1
BLAST of CmoCh09G000560 vs. TAIR10
Match: AT4G35620.1 (AT4G35620.1 Cyclin B2;2) HSP 1 Score: 129.8 bits (325), Expect = 1.9e-30 Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = 1
BLAST of CmoCh09G000560 vs. TAIR10
Match: AT2G17620.1 (AT2G17620.1 Cyclin B2;1) HSP 1 Score: 128.3 bits (321), Expect = 5.4e-30 Identity = 67/153 (43.79%), Postives = 100/153 (65.36%), Query Frame = 1
BLAST of CmoCh09G000560 vs. TAIR10
Match: AT4G37490.1 (AT4G37490.1 CYCLIN B1;1) HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22 Identity = 56/141 (39.72%), Postives = 93/141 (65.96%), Query Frame = 1
BLAST of CmoCh09G000560 vs. NCBI nr
Match: gi|659104678|ref|XP_008452954.1| (PREDICTED: G2/mitotic-specific cyclin-2-like [Cucumis melo]) HSP 1 Score: 193.7 bits (491), Expect = 3.0e-46 Identity = 112/199 (56.28%), Postives = 133/199 (66.83%), Query Frame = 1
BLAST of CmoCh09G000560 vs. NCBI nr
Match: gi|449455599|ref|XP_004145540.1| (PREDICTED: G2/mitotic-specific cyclin-2-like [Cucumis sativus]) HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45 Identity = 111/199 (55.78%), Postives = 132/199 (66.33%), Query Frame = 1
BLAST of CmoCh09G000560 vs. NCBI nr
Match: gi|743895909|ref|XP_011041231.1| (PREDICTED: cyclin-B2-4-like isoform X2 [Populus euphratica]) HSP 1 Score: 182.6 bits (462), Expect = 6.9e-43 Identity = 105/197 (53.30%), Postives = 127/197 (64.47%), Query Frame = 1
BLAST of CmoCh09G000560 vs. NCBI nr
Match: gi|566173505|ref|XP_002307791.2| (cyclin family protein [Populus trichocarpa]) HSP 1 Score: 182.6 bits (462), Expect = 6.9e-43 Identity = 105/197 (53.30%), Postives = 127/197 (64.47%), Query Frame = 1
BLAST of CmoCh09G000560 vs. NCBI nr
Match: gi|743895911|ref|XP_011041232.1| (PREDICTED: G2/mitotic-specific cyclin-2-like isoform X3 [Populus euphratica]) HSP 1 Score: 182.6 bits (462), Expect = 6.9e-43 Identity = 105/197 (53.30%), Postives = 127/197 (64.47%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|