CmoCh08G010740 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCCGGTATCCCGCTCCGTCGCGCCAGAAAATCTCCCCGGCGACGAGGAGCTACCAGGTGTCGACGTGTTCATCCCCACAGCGGATCCGGCGAAAGAGCCGACAGTGGAGGTGATGAACACCGTGTTGTCGTCTCTGGCTCTGGAGTATCCAGCGGAGAAGGTGGGCGTCTACCTGTCGGACGCCGGCGGACGCTGTATGCATTAAAAGAAACTTTTCTACAATATCAGAAAGAATGATATCTATGACAACCAATCCCGGTCTGGTTTCAAGGTCATGAACTCCTCCACGACCCGTTCGCTTTTACATGGATGTTCTTGCAGGCTACCTGTTTGTTAAAATGCCATGTTTCTGGGTTTTGTTTTCTAGACCAAGTGGCGTGGAATGGATGGGGTAAGAGGGCCGGTGTTGTCCGGAACTGGATATCTCTTGAGGAGGAAGGCGTTGTTTTGGAATCCTAATCAGGAAGGTAAATGAAATTCGTCTGTTTTGATTTCAAACTTGGTTCCTCTGTTTCTTATGAATCCCAGAGAGGTTTGATTCAGAGCCACAGAAAGCTCTTGGTCGATCCCAAAAGTTCATTGACTCGTTGAATGCAAAAAAGGAGTATCAGTGCGTATCTGCTGCAATGCAGAGGATGGAGTTGTGTTTACCTGTACTCAAAGCGGGCATGCTTCCTGGGTTGCAGCCCAGTCGACATGAAAGACGCCATGGTTCAGATGCTAAAAATGGAGCTCAGAGTTGTTCCAAGTTGCTTTATCTAAGTATAGTCCTCTCACATACGGTGTCTCAAGGATGTCAATTCTCCAAAGCATGGCCTACGCCTACTTCACATTCTCCTCCCTGCCTTCAGTTGCTTTCGTCTTGTATGGGGTGGTTCCTCAATGGGGCTTCCTGA ATGGCGGCCGGTATCCCGCTCCGTCGCGCCAGAAAATCTCCCCGGCGACGAGGAGCTACCAGGTGTCGACGTGTTCATCCCCACAGCGGATCCGGCGAAAGAGCCGACAGTGGAGGTGATGAACACCGTGTTGTCGTCTCTGGCTCTGGAGTATCCAGCGGAGAAGGTGGGCGTCTACCTGTCGGACGCCGGCGGACGCTAAAGAATGATATCTATGACAACCAATCCCGGTCTGGTTTCAAGGTCATGAACTCCTCCACGACCCGTTCGCTTTTACATGGATGTTCTTGCAGGCTACCTACCAAGTGGCGTGGAATGGATGGGGTAAGAGGGCCGGTGTTGTCCGGAACTGGATATCTCTTGAGGAGGAAGGCGTTGTTTTGGAATCCTAATCAGGAAGAGAGGTTTGATTCAGAGCCACAGAAAGCTCTTGGTCGATCCCAAAAGTTCATTGACTCGTTGAATGCAAAAAAGGAGTATCAGTGCGTATCTGCTGCAATGCAGAGGATGGAGTTGTGTTTACCTGTACTCAAAGCGGGCATGCTTCCTGGGTTGCAGCCCAGTCGACATGAAAGACGCCATGGTTCAGATGCTAAAAATGGAGCTCAGAGTTGTTCCAAGTTGCTTTATCTAAGTATAGTCCTCTCACATACGGTGTCTCAAGGATGTCAATTCTCCAAAGCATGGCCTACGCCTACTTCACATTCTCCTCCCTGCCTTCAGTTGCTTTCGTCTTGTATGGGGTGGTTCCTCAATGGGGCTTCCTGA ATGGCGGCCGGTATCCCGCTCCGTCGCGCCAGAAAATCTCCCCGGCGACGAGGAGCTACCAGGTGTCGACGTGTTCATCCCCACAGCGGATCCGGCGAAAGAGCCGACAGTGGAGGTGATGAACACCGTGTTGTCGTCTCTGGCTCTGGAGTATCCAGCGGAGAAGGTGGGCGTCTACCTGTCGGACGCCGGCGGACGCTAAAGAATGATATCTATGACAACCAATCCCGGTCTGGTTTCAAGGTCATGAACTCCTCCACGACCCGTTCGCTTTTACATGGATGTTCTTGCAGGCTACCTACCAAGTGGCGTGGAATGGATGGGGTAAGAGGGCCGGTGTTGTCCGGAACTGGATATCTCTTGAGGAGGAAGGCGTTGTTTTGGAATCCTAATCAGGAAGAGAGGTTTGATTCAGAGCCACAGAAAGCTCTTGGTCGATCCCAAAAGTTCATTGACTCGTTGAATGCAAAAAAGGAGTATCAGTGCGTATCTGCTGCAATGCAGAGGATGGAGTTGTGTTTACCTGTACTCAAAGCGGGCATGCTTCCTGGGTTGCAGCCCAGTCGACATGAAAGACGCCATGGTTCAGATGCTAAAAATGGAGCTCAGAGTTGTTCCAAGTTGCTTTATCTAAGTATAGTCCTCTCACATACGGTGTCTCAAGGATGTCAATTCTCCAAAGCATGGCCTACGCCTACTTCACATTCTCCTCCCTGCCTTCAGTTGCTTTCGTCTTGTATGGGGTGGTTCCTCAATGGGGCTTCCTGA
BLAST of CmoCh08G010740 vs. TrEMBL
Match: A0A0J8CPJ7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g056710 PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.6e-14 Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 1
BLAST of CmoCh08G010740 vs. TrEMBL
Match: A0A0K9REB7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076690 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.5e-12 Identity = 45/106 (42.45%), Postives = 58/106 (54.72%), Query Frame = 1
BLAST of CmoCh08G010740 vs. TrEMBL
Match: A0A061EUI9_THECC (Cellulose synthase, putative isoform 1 OS=Theobroma cacao GN=TCM_020810 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.5e-12 Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 1
BLAST of CmoCh08G010740 vs. TrEMBL
Match: M1AUM3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400011752 PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 5.6e-12 Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 1
BLAST of CmoCh08G010740 vs. TrEMBL
Match: A0A0V0INZ5_SOLCH (Putative cellulose synthase-like protein G1-like OS=Solanum chacoense PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 5.6e-12 Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 1
BLAST of CmoCh08G010740 vs. NCBI nr
Match: gi|731322862|ref|XP_010672125.1| (PREDICTED: cellulose synthase-like protein G2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 88.2 bits (217), Expect = 2.3e-14 Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 1
BLAST of CmoCh08G010740 vs. NCBI nr
Match: gi|902217664|gb|KNA17850.1| (hypothetical protein SOVF_076690 [Spinacia oleracea]) HSP 1 Score: 81.6 bits (200), Expect = 2.1e-12 Identity = 45/106 (42.45%), Postives = 58/106 (54.72%), Query Frame = 1
BLAST of CmoCh08G010740 vs. NCBI nr
Match: gi|747087251|ref|XP_011091159.1| (PREDICTED: cellulose synthase-like protein G3 [Sesamum indicum]) HSP 1 Score: 81.6 bits (200), Expect = 2.1e-12 Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 1
BLAST of CmoCh08G010740 vs. NCBI nr
Match: gi|590659056|ref|XP_007035023.1| (Cellulose synthase, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 80.9 bits (198), Expect = 3.6e-12 Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 1
BLAST of CmoCh08G010740 vs. NCBI nr
Match: gi|565383134|ref|XP_006357878.1| (PREDICTED: cellulose synthase-like protein G1 [Solanum tuberosum]) HSP 1 Score: 79.7 bits (195), Expect = 8.1e-12 Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |