CmoCh08G009970 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G009970
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionHigh mobility group B protein 15
LocationCmo_Chr08 : 6460455 .. 6465617 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAACTTTCGTATTTTTCAATTCCTAATTTGCCCTTCTCCTTCATCCAATGCTCTCGGTTACTTCTTGTTCTTGGTTTTCTATCGCATCAATGTCCTCTTAATTAGCACTGGTTATGGTAAGTTCTAATCCTTTCTTCTTTTTCATAATCTTTCTATTCTTTTCTTTTTTTGGGCATTTATGAATTTTCCATTCATCTTTTCTTCCCTTTATCTCTAAAGTAAGTATCCTTTCATGAATTTTTTTTTAAAAAAACGACTGTTTATTTTGTCATTTCATCATCTGGATTGTTTGCATTTTGCATTTTCATAATTCGTTTGAATAATACGGATTTAGTAACCATTAATTTCTACTTTGTTTCTGCTCTGATTCGTGTTTTTCAATGTGGGGTTTCTTTATTTTAATGAATGGTTTCTTGAGAAATCTGCAAGTTTTGAAATCTGATATGGTGTCAGATAATGGGGAAATAGGGAGAAGAAGAAGAAGAAAAGAAGAAGAAGAAGAAGGAAAAGTGCTTTTTGGCTTTGTCAATATAGAGGAGACAATTGTTTAATACCCATTAGATATCTTTGGAATGTCAGGGAAACGTCAATAGCTCTGTAGTAGGCCTGAAACTTTCCCTGTGAGAGGGATTTATTGCAATGGCGCTTCTCTTAGCCTCCTTTTTCTAGCTCCTTTTTTCTAGTTCCTTGGGTTCAGCCCCCTTGGTTCTCTGAGATCAATTCATGGCTGTGGCAGCTTTGCTGCTGAGCCATTTTCTTTTTTGGGTCTTTGAATGTCTACCTTATTACTTGGAGTTATTTCATCTGTTCAGGTAGTTGTGGTGTTTCTTGTTATCTCAGTTCTGAACTTCTAATTTCCTTGAGGTTTCTGTTGTTTTTGGCCATTTATGAATCTTTGCATGCGGTGTAGAGTTAATTCAATCTTTGCATGGGTTATGAATCTCCATGAAGTTTCTGTTTGTATGCTATATAAAGGGAATTGTGGGAAGATTATCTTGGTGACTGGAGGAGAAGATCAAAGCTGTTTATAGAGGTCTCTGTCTGATTTTCTCGATTGGTTTTTTCCTTCCTGTGAGCTGCCTTTCTGTTGGTATTGTATGGTTTAATGGTTCAAGTATGTAATACCCATATTCTCAGGGCATTCTTCAGCTTTCATTGTTGAATGAGTAAATAACATTGCATACTCAACGGCTATTGATACTTCTTGGATGTAAGGTAGACTGAATAGAAGTCACTGATAGTTCTCCATCCATCTGGGGCATATCATTGTTGCATCTGTTCATTTTGTTGGCCTATGACATTCATTACAAATTGAGATTTCACGTCGGTTGGGAGGTGAATGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGAAGATGTGTTCTAAAAACGTTGAGGGGAAGCTTGAAAGGGAAAGCCCATAGGATAATGTCTGCTAGTGGTGGGCTGTTACAAATGGTATTAGAGTTAGACATCGGGCGATGTGTCAATGAGGCGGTGTGCACGAGGCCGTGTGCCAGTAAAGATGCTGGGCCCCAAAGGGGGTGGATTAGGGGGGGTCCCACGTCAATTGGAGAAGGGAATGAGTGCTAGTGAGGACGCAGGACCCGAAGGAGGGTGAATTGTAAGATCCCACATTAGTTGAGGAGGAGAATGAAACATTCTTTATAAGTGAATGGAAACATTTTCTTAGTAGACGCGTTTTAAAAACTTTGAGGGGAATGTTGAAAGAGAAAACCCAGAGAGAATAATATCTGCTAGCGGTGAGCTTGGTGTATAATACATTAACGTTTCTGCCCTTAAGAGCGAGCACAATTACTATACATTCTGGGGGTTTCTTGTCGTTCAAAACCTTTAGACAGACAATGGTTCACATCTTTTCCCAACTTTAGGCATGGGGATTTGGGGTAGATTCATTTATTTCATCATTTTTCACATGTACCCATTACTATTGAATTAATCAGATGTAAGTATCACACACTCTCCATTTCTACTTCCACCTTAGTTCCTAACATCATTATGATTCAAAAGGCCTCTCATTTGAGATTTGTTCAACCTTTTATTGCTGTAGTGTTGTCTTCAAATTTTGTATAACACTGAGAGATATGTGCTTGCAGAGTTCATCGGTTGATGGTAGAAGAGGAAAGAACTGAAGCAGGCTGGGATAGCAAGAAGGAGTTGACCATGACATCGACTTCTTCTGCTGGGGGGAAGCAACTGGCCGTGGTTGAAGCTCCTTCTAACTGTGTTCCATACCCGCCACCGCAAACGACGTATGAGGATCTCATAGCCGATCCCAAGCTCTTTATGGCGTCCTTGGAAAAGCTCCATTCTATTATGGGAACCAAGTTCATGTACTTTTCTTCAAAATCTCCTCTTTTACCTGCATTGTAAGTTCATGCACTTCTTATGTTTCACTTTTACCTCCGCAATGCAGGATCCCCATTATTGGTGGGAAAGAACTGGACCTGCATCGGCTTTTCGTGGAGGTCACTGCTCGTGGTGGCCTTGAGAAGGTAAAATAGACTTGCTATGAATATTGTGATCAATATTTTCATTTCTGAAACTTGTTGATTGATATTTAGAGGACATATATAAGGTGTTTATTTGAGTCTATTTCCAGCTTTTTCATTCATTTAGAAGTCAGACGATTAGAAGGCTGTGGTTTTTTACTCTTCAAGTACTCAGTTTTGATGCTATAATCCTTTCTGAAAAAAGGGTTTGGGTTGTAAAAGAATGTTCCGTTCTCTCTTTAATTGATGTGAGATCTCACAATCCACCCCCTTAGGGGCTCAACGTCCTCGTTGGCACACTGCTCGGTGTTGACCTCCCTTCAAGGCCCAGCGTCCTCGCTGGCGCACCGCCCAGTGTCCACTCCCTTTGAGGCTCAATGTCCTCGATGGCACACCGCTCGGTGTCCACCCACCTTCGGGGCTTAGCATCCTCATTGACACACCGCGTGGAACCTAGCTCTGATACCGCTTGTAAAAGTCCAAGCCCACTGCTAGTAGATATTGTTTTCTTTGAAATTTTTCTTTCGAGCTTTCACTCAATCGCGTCTGCTAGGGAGAGGTTTTCACACCTTTATAAAGAATGCTTTGTTTCTCTCTCCAATTCATGTGGAATCTCACAAAATCTTATGCACAGCTCGTTAGGGGAATGGATAAAAGTTTAATCGTTCTAGTTAACATCTGTTGAAAATTTGGCAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTCAAATTTCCTTCGACAGCCACCAATGCATCTTTTGTGCTGAGGAAGTATTATCTCTCATTAATTCATCATTTTGAACAGATTTACTTCTTTAAAGCCGTGGGATGGACACCAAAAGTTTCTGGTACCCTTTGTTAAAATAGAGCACCCTTCTTTTTCCTGAAGAACATGCCATATTCTAACATAACAATCTTTCAGATTCCTCTCCAACCCCAAGTGCAGTGCCAATTCCGACACAAGGGACGATGACCTCTATGTTGCCGCCATCCAATCGGCCAGCACCCCAGCAGCAGCCACAGACTACTGCAACCGAACTTCCAGCAGGTGTCTTCTTTACGAGTTCGTATGATATGCCATATAAGTACACTTAGTTTCTCTGATTCATAAATAGATAACTCTTTTCAACTTACAGTTGCTCCGAGTTCGGTACCACCAGCGGGAGGGTTTCCGGTGGTTGGAGTCATTGATGGAAAATTTGAAAGCGGATATCTCGTTACTGTTACTGTAGGAAATGAGAAGCTAAAAGGTGTGCTTTATATGACTCCTCCAGAGCAACCTGCTCAACAAGTGTTCCAGCCTGGTAGTGTTTTCACCAAAGATGGTACTACCTCCACTACACCAAGTGCTCAGCGCCGTCGTCGGAGGAAGAAATCCGAGATCAAACGAAGGGATCCAGCTCATCCAAAGCCGAATAGAAGTGGCTACAATTTCTTCTTCGCCGAGCAGCATGCTAGACTCAAACCATTACACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGAGCTTTGGAATAAACTTAATGAGACTGAAAAAACAGTAAGGATTTGCAATACCTCTTTAGTTTAGAATCTGTCACAGCCGGTGTTGATAGTTTTTTCTTTACTTGCAGGTTTATCAGGAGAAAGCTATGAAAGATAAAGAACGATACAGAATTGAGATGGAGAATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTCATGCAGTGCCATTACAGCAGCTTCTTCCTGGGACAGACCTGAATATGGTCTATGCTGCTGACAAAAACGAAGAAACCGAGGGTGGCGAACTTCCTCATATGCCGTATAATGATACAATTTATGTTGAAGATAAGGAGGAGGAAGAAGAGGAAGAGGAGGACGACGACGATGAAGAAGAAGGTGCAGCAGCACCTCAAGGAGTTGGCAATGTGGATGTTAACGTCTTGGCTGAGGAGGAACGCTGCGAGACTAGACCAGAACCAACAGCAACAGCCATTATACAAGAGAGTAGCACGGTCAAGGACGATAAGGAAGTTTTCGCCGGGCATGCAGTGGTAATGGTGGATGTGGCAAATGAAGAACCAGAACCAACACCAACAGCCATTGTAGAAGATAAGGAAGTTTTCGCCGGGGATTCGATGGTAATGGTGGTGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTCGCCGGGGATTCAATGGTAATGGTGGAGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTCGCCGGAGATTCGATGGTAATGGTGGAGGCGGAAAATGAAGAACCAGAACCAACAACAGCAGCCATTATAGAAGATAAGGAAGTTTTCGCCGGGGATTCGGTGGTAATGATGGAGGTGGCAAATGAAGAACCAGAAGCAACAACCGCAGCCATTGTAGAAGATAAGGAGGTTTTCGCCGGGGATTCGGTGGTAATGATGGAGGCGACAAATGAAGGAACAGAAGCAACAAGAACAGACATTATAGAAGACAAGGAAGTTTTTGTCGGGGATTCATTGATAATGATGGAGGCAGCAAAGGAAGAAGCAGAGCCAACAGCAACAGCCATTATAGAAGATTAA

mRNA sequence

TAACTTTCGTATTTTTCAATTCCTAATTTGCCCTTCTCCTTCATCCAATGCTCTCGGTTACTTCTTGTTCTTGGTTTTCTATCGCATCAATGTCCTCTTAATTAGCACTGGTTATGAGTTCATCGGTTGATGGTAGAAGAGGAAAGAACTGAAGCAGGCTGGGATAGCAAGAAGGAGTTGACCATGACATCGACTTCTTCTGCTGGGGGGAAGCAACTGGCCGTGGTTGAAGCTCCTTCTAACTGTGTTCCATACCCGCCACCGCAAACGACGTATGAGGATCTCATAGCCGATCCCAAGCTCTTTATGGCGTCCTTGGAAAAGCTCCATTCTATTATGGGAACCAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTGGACCTGCATCGGCTTTTCGTGGAGGTCACTGCTCGTGGTGGCCTTGAGAAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTCAAATTTCCTTCGACAGCCACCAATGCATCTTTTGTGCTGAGGAAGTATTATCTCTCATTAATTCATCATTTTGAACAGATTTACTTCTTTAAAGCCGTGGGATGGACACCAAAAGTTTCTGATTCCTCTCCAACCCCAAGTGCAGTGCCAATTCCGACACAAGGGACGATGACCTCTATGTTGCCGCCATCCAATCGGCCAGCACCCCAGCAGCAGCCACAGACTACTGCAACCGAACTTCCAGCAGTTGCTCCGAGTTCGGTACCACCAGCGGGAGGGTTTCCGGTGGTTGGAGTCATTGATGGAAAATTTGAAAGCGGATATCTCGTTACTGTTACTGTAGGAAATGAGAAGCTAAAAGGTGTGCTTTATATGACTCCTCCAGAGCAACCTGCTCAACAAGTGTTCCAGCCTGGTAGTGTTTTCACCAAAGATGGTACTACCTCCACTACACCAAGTGCTCAGCGCCGTCGTCGGAGGAAGAAATCCGAGATCAAACGAAGGGATCCAGCTCATCCAAAGCCGAATAGAAGTGGCTACAATTTCTTCTTCGCCGAGCAGCATGCTAGACTCAAACCATTACACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGAGCTTTGGAATAAACTTAATGAGACTGAAAAAACAGTTTATCAGGAGAAAGCTATGAAAGATAAAGAACGATACAGAATTGAGATGGAGAATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTCATGCAGTGCCATTACAGCAGCTTCTTCCTGGGACAGACCTGAATATGGTCTATGCTGCTGACAAAAACGAAGAAACCGAGGGTGGCGAACTTCCTCATATGCCGTATAATGATACAATTTATGTTGAAGATAAGGAGGAGGAAGAAGAGGAAGAGGAGGACGACGACGATGAAGAAGAAGGTGCAGCAGCACCTCAAGGAGTTGGCAATGTGGATGTTAACGTCTTGGCTGAGGAGGAACGCTGCGAGACTAGACCAGAACCAACAGCAACAGCCATTATACAAGAGAGTAGCACGGTCAAGGACGATAAGGAAGTTTTCGCCGGGCATGCAGTGGTAATGGTGGATGTGGCAAATGAAGAACCAGAACCAACACCAACAGCCATTGTAGAAGATAAGGAAGTTTTCGCCGGGGATTCGATGGTAATGGTGGTGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTCGCCGGGGATTCAATGGTAATGGTGGAGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTCGCCGGAGATTCGATGGTAATGGTGGAGGCGGAAAATGAAGAACCAGAACCAACAACAGCAGCCATTATAGAAGATAAGGAAGTTTTCGCCGGGGATTCGGTGGTAATGATGGAGGTGGCAAATGAAGAACCAGAAGCAACAACCGCAGCCATTGTAGAAGATAAGGAGGTTTTCGCCGGGGATTCGGTGGTAATGATGGAGGCGACAAATGAAGGAACAGAAGCAACAAGAACAGACATTATAGAAGACAAGGAAGTTTTTGTCGGGGATTCATTGATAATGATGGAGGCAGCAAAGGAAGAAGCAGAGCCAACAGCAACAGCCATTATAGAAGATTAA

Coding sequence (CDS)

ATGGTAGAAGAGGAAAGAACTGAAGCAGGCTGGGATAGCAAGAAGGAGTTGACCATGACATCGACTTCTTCTGCTGGGGGGAAGCAACTGGCCGTGGTTGAAGCTCCTTCTAACTGTGTTCCATACCCGCCACCGCAAACGACGTATGAGGATCTCATAGCCGATCCCAAGCTCTTTATGGCGTCCTTGGAAAAGCTCCATTCTATTATGGGAACCAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTGGACCTGCATCGGCTTTTCGTGGAGGTCACTGCTCGTGGTGGCCTTGAGAAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTCAAATTTCCTTCGACAGCCACCAATGCATCTTTTGTGCTGAGGAAGTATTATCTCTCATTAATTCATCATTTTGAACAGATTTACTTCTTTAAAGCCGTGGGATGGACACCAAAAGTTTCTGATTCCTCTCCAACCCCAAGTGCAGTGCCAATTCCGACACAAGGGACGATGACCTCTATGTTGCCGCCATCCAATCGGCCAGCACCCCAGCAGCAGCCACAGACTACTGCAACCGAACTTCCAGCAGTTGCTCCGAGTTCGGTACCACCAGCGGGAGGGTTTCCGGTGGTTGGAGTCATTGATGGAAAATTTGAAAGCGGATATCTCGTTACTGTTACTGTAGGAAATGAGAAGCTAAAAGGTGTGCTTTATATGACTCCTCCAGAGCAACCTGCTCAACAAGTGTTCCAGCCTGGTAGTGTTTTCACCAAAGATGGTACTACCTCCACTACACCAAGTGCTCAGCGCCGTCGTCGGAGGAAGAAATCCGAGATCAAACGAAGGGATCCAGCTCATCCAAAGCCGAATAGAAGTGGCTACAATTTCTTCTTCGCCGAGCAGCATGCTAGACTCAAACCATTACACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGAGCTTTGGAATAAACTTAATGAGACTGAAAAAACAGTTTATCAGGAGAAAGCTATGAAAGATAAAGAACGATACAGAATTGAGATGGAGAATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTCATGCAGTGCCATTACAGCAGCTTCTTCCTGGGACAGACCTGAATATGGTCTATGCTGCTGACAAAAACGAAGAAACCGAGGGTGGCGAACTTCCTCATATGCCGTATAATGATACAATTTATGTTGAAGATAAGGAGGAGGAAGAAGAGGAAGAGGAGGACGACGACGATGAAGAAGAAGGTGCAGCAGCACCTCAAGGAGTTGGCAATGTGGATGTTAACGTCTTGGCTGAGGAGGAACGCTGCGAGACTAGACCAGAACCAACAGCAACAGCCATTATACAAGAGAGTAGCACGGTCAAGGACGATAAGGAAGTTTTCGCCGGGCATGCAGTGGTAATGGTGGATGTGGCAAATGAAGAACCAGAACCAACACCAACAGCCATTGTAGAAGATAAGGAAGTTTTCGCCGGGGATTCGATGGTAATGGTGGTGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTCGCCGGGGATTCAATGGTAATGGTGGAGGCTGCAAATGAAGAACCACAACCAACAGCTACAACCATTATAGAAGATAAGGAAGTTTTCGCCGGAGATTCGATGGTAATGGTGGAGGCGGAAAATGAAGAACCAGAACCAACAACAGCAGCCATTATAGAAGATAAGGAAGTTTTCGCCGGGGATTCGGTGGTAATGATGGAGGTGGCAAATGAAGAACCAGAAGCAACAACCGCAGCCATTGTAGAAGATAAGGAGGTTTTCGCCGGGGATTCGGTGGTAATGATGGAGGCGACAAATGAAGGAACAGAAGCAACAAGAACAGACATTATAGAAGACAAGGAAGTTTTTGTCGGGGATTCATTGATAATGATGGAGGCAGCAAAGGAAGAAGCAGAGCCAACAGCAACAGCCATTATAGAAGATTAA
Homology
[Close]
BLAST of CmoCh08G009970 vs. Swiss-Prot
Match: HMG15_ARATH (High mobility group B protein 15 OS=Arabidopsis thaliana GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.4e-103
Identity = 233/467 (49.89%), Postives = 289/467 (61.88%), Query Frame = 1 

Query: 45  PQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIR 104
           P+ TYE ++ADP+LFM SLE+LHS++GTKFM+PIIGG++LDLH+LFVEVT+RGG+ K++ 
Sbjct: 21  PEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILN 80

Query: 105 ERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAV 164
           ERRWKEVT+ F FP TATNAS+VLRKYY SL++++EQIYFF++ G  P   DS  +PSA 
Sbjct: 81  ERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIP--PDSMQSPSAR 140

Query: 165 PIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSV--PPAGGFPVVGVIDGKFESG 224
           P   QG +        RP+ Q+    T T  P +  +        G  VVGVIDGKFESG
Sbjct: 141 PCFIQGAI--------RPS-QELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESG 200

Query: 225 YLVTVTVGNEKLKGVLYMTPPEQPA--QQVFQPGSVFTKDGTTSTTPS------AQRRRR 284
           YLVTVT+G+E+LKGVLY   P+     Q   Q   V       S  P        +RRRR
Sbjct: 201 YLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRR 260

Query: 285 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNETEKT 344
           RKKSEIKRRDP HPKPNRSGYNFFFAEQHARLKPLHPGKDR+ISRMIGELWNKLNE EK 
Sbjct: 261 RKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKL 320

Query: 345 VYQEKAMKDKERYRIEMENYREKLRTGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGG 404
           +YQ KAM+DKERYR EME+YREK + GQ+IS+AVPLQQ LP  +++M  A          
Sbjct: 321 IYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNVDMAEA---------- 380

Query: 405 ELPHMPYNDTIYVEDKEEEEEEEEDDDDEEEGAAAPQGVGNVDVNVLAEEERC-----ET 464
           +LP             E EE++EE D     G + P    +++ +   EE          
Sbjct: 381 DLP-----------IDEVEEDDEEGDSSGSSGESEPHDDQSIETDPELEEPSLNPSGPNL 440

Query: 465 RPEPTATAIIQESSTVKDDKEVFAGHAVVMVDVANEEPEPTPTAIVE 497
            P PT   +  +            G  V+      +  EPT     E
Sbjct: 441 NPNPTEIVVAPKEKN---------GDVVMETSPLKKADEPTVAVTAE 446

[Close]
BLAST of CmoCh08G009970 vs. Swiss-Prot
Match: HMGB9_ARATH (High mobility group B protein 9 OS=Arabidopsis thaliana GN=HMGB9 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 9.7e-65
Identity = 144/326 (44.17%), Postives = 199/326 (61.04%), Query Frame = 1 

Query: 35  APSNCVPYPPPQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVT 94
           +P+    YP P   +E ++ D  +F  +L + HSIM TKFMIP+IGGKELDLH L+VEVT
Sbjct: 20  SPAKIKEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVT 79

Query: 95  ARGGLEKVIRERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKV 154
            RGG EKV+ E++W+EV  VF+F +T T+ASFVLRK+YL+L+ H+EQ++ F A G  P +
Sbjct: 80  RRGGYEKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARG--PLL 139

Query: 155 SDSSPTPSAVPIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGV 214
              +   +      +  +    PPS R           T  P+   SS      F  +G 
Sbjct: 140 HPIATFHANPSTSKEMALVEYTPPSIR--------YHNTHPPSQGSSS------FTAIGT 199

Query: 215 IDGKFESGYLVTVTVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPSAQRRRR 274
           I+GKF+ GYLV V +G+E L GVLY +    P+     P +V             +RRR 
Sbjct: 200 IEGKFDCGYLVKVKLGSEILNGVLYHSAQPGPSS---SPTAVLNNAVVPYVETGRRRRRL 259

Query: 275 RKKSEIKRR-DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNETEK 334
            K+   +RR DP +PKPNRSGYNFFFAE+H +LK L+P K+RE +++IGE W+ L+  E+
Sbjct: 260 GKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEER 319

Query: 335 TVYQEKAMKDKERYRIEMENYREKLR 360
            VYQ+  +KDKERY+ E+  YRE LR
Sbjct: 320 MVYQDIGLKDKERYQRELNEYRETLR 326

[Close]
BLAST of CmoCh08G009970 vs. Swiss-Prot
Match: HMG10_ARATH (High mobility group B protein 10 OS=Arabidopsis thaliana GN=HMGB10 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.1e-58
Identity = 129/319 (40.44%), Postives = 182/319 (57.05%), Query Frame = 1 

Query: 49  YEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRW 108
           Y+DL+ +  LF   L     +      +P +GG  LDLHRLF+EVT+RGG+E+V+++R+W
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 109 KEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPT 168
           KEV   F FP+T T+ASFVLRKYYL  +   E +Y+ +                      
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK--------------------- 155

Query: 169 QGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVT 228
                   P S+  +  +  ++ A E P        P  G+ V G IDGKF+SGYLVT+ 
Sbjct: 156 --------PVSSLQSTDEALKSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMK 215

Query: 229 VGNEKLKGVLYMTP--PEQPAQQVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPA 288
           +G+++LKGVLY  P  P Q  Q +  P ++            + +RR RKKS++   D  
Sbjct: 216 LGSQELKGVLYHIPQTPSQSQQTMETPSAIV----------QSSQRRHRKKSKLAVVDTQ 275

Query: 289 HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKER 348
            PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W+ L E+EK VYQ+K +KD ER
Sbjct: 276 KPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVER 315

Query: 349 YRIEMENYREKLRTGQIIS 366
           YRIEM  Y+    +G   S
Sbjct: 336 YRIEMLEYKSSHESGATAS 315

[Close]
BLAST of CmoCh08G009970 vs. Swiss-Prot
Match: HMG11_ARATH (Putative high mobility group B protein 11 OS=Arabidopsis thaliana GN=HMGB11 PE=3 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 1.0e-45
Identity = 120/320 (37.50%), Postives = 175/320 (54.69%), Query Frame = 1 

Query: 49  YEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRW 108
           Y+D++ +P+LF   L   H     KF IPI+GGK LDLHRLF EVT+RGGLEKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 109 KEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPT 168
           KEV   F F +T TN++FVLRK YL ++  FE +Y+F+A             P +     
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQA-------------PLSTFWEK 149

Query: 169 QGTMTSMLPPS-NRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTV 228
           +  +  ++  S NR    Q+          + P +V       + G+IDGKFESGYL++ 
Sbjct: 150 EKALKLLIEKSANRDKDSQE----------LKPGTV-------ITGIIDGKFESGYLIST 209

Query: 229 TVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAH 288
            VG+EKLKG+LY   PE             TK G          +++ K S+     P  
Sbjct: 210 KVGSEKLKGMLYHISPE-------------TKRG----------KKKAKSSQGDSHKP-- 269

Query: 289 PKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERY 348
           PK  R+GYNFF AEQ  R+K  + G+     +  G +W  L+E+++ VY EK+ +D +RY
Sbjct: 270 PKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRY 294

Query: 349 RIEMENYREKL--RTGQIIS 366
           ++E+  YR  +  R  +I++
Sbjct: 330 KMEILQYRSLMESRVAEIVA 294

[Close]
BLAST of CmoCh08G009970 vs. Swiss-Prot
Match: ARID2_HUMAN (AT-rich interactive domain-containing protein 2 OS=Homo sapiens GN=ARID2 PE=1 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 6.0e-14
Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 1 

Query: 59  FMASLEKLHSIMGTKFM-IPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKF 118
           F+  L + H   G+ F  IP +GGKELDLH L+  VT  GG  KV  + +W E+   F F
Sbjct: 19  FLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNF 78

Query: 119 PSTATNASFVLRKYYLSLIHHFEQIYFF 146
           P + +NA+F L++YYL  +  +E+++ F
Sbjct: 79  PRSCSNAAFALKQYYLRYLEKYEKVHHF 106

[Close]
BLAST of CmoCh08G009970 vs. TrEMBL
Match: A0A0A0LL59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138760 PE=4 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 7.9e-199
Identity = 377/501 (75.25%), Postives = 420/501 (83.83%), Query Frame = 1 

Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           M+EEERTEAGW S+KELTM STS AGGKQL V+E  SNCVPYPPPQTTYED+IA+ K+FM
Sbjct: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
            +LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVT+RGG+EKVIRERRWKEVTSVF FPST
Sbjct: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYY+SL+HHFEQIYFFKAVGWTP  SDSSP PSA  IPTQG +TSMLPPS+
Sbjct: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQG-VTSMLPPSD 180

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
             A   QPQ+TATELPAV+PSS  P GGFPV+GVIDGKF+SGYLVTVTVG EKLKGVLY 
Sbjct: 181 NQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ 240

Query: 241 TPPEQPAQ-QVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300
             PEQP+Q QV QP   F KDG+T TTP+A RRRRRKKSEIKRRDPAHPKPNRSGYNFFF
Sbjct: 241 A-PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300

Query: 301 AEQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLR 360
           AEQHARLKPL+PGKDREISRMIG+LWNKL E+E+TVYQEKAMKDKERYRIEM +YREKLR
Sbjct: 301 AEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLR 360

Query: 361 TGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYV----------ED 420
           TGQIIS AVPLQQ LP  DLNMVY  DKNEETEGGE    P +DT YV          E 
Sbjct: 361 TGQIISDAVPLQQRLPEPDLNMVY-GDKNEETEGGE-SQTPDHDTSYVEGDSGEYKTEEK 420

Query: 421 KEEEEEEEEDDDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTATAIIQESSTVKDDK 480
           +E+EE++EED++D+ E  A+PQG+GNVDVN+L EEE+CETR       + +ESSTV D K
Sbjct: 421 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVEN-VRKESSTVGDKK 480

Query: 481 EVFAGHAVVMVDVANEEPEPT 491
           EV AG +V++   A E PEPT
Sbjct: 481 EVLAGDSVMVEVEAKEVPEPT 496

[Close]
BLAST of CmoCh08G009970 vs. TrEMBL
Match: A0A061ELP2_THECC (HMG box protein with ARID/BRIGHT DNA-binding domain isoform 2 OS=Theobroma cacao GN=TCM_020322 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 2.4e-139
Identity = 282/427 (66.04%), Postives = 315/427 (73.77%), Query Frame = 1 

Query: 19  MTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPI 78
           M STS A    LA+ E  SN  PYPPP   YED+ A+PKLFMA+LEKLH+ MGTKFMIPI
Sbjct: 1   MASTSFAKQSLLAMKEPASNYNPYPPPLARYEDVAANPKLFMATLEKLHATMGTKFMIPI 60

Query: 79  IGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHH 138
           IGGKELDLHRLFVEVTARGG+EK+I ERRWKEVT++F FPSTATNASFVLRKYY+SL+HH
Sbjct: 61  IGGKELDLHRLFVEVTARGGIEKIISERRWKEVTAIFNFPSTATNASFVLRKYYVSLLHH 120

Query: 139 FEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAV 198
           +EQIYFFKA GW P  SD    PS    PTQGT+   +      A  QQP+    ELPA 
Sbjct: 121 YEQIYFFKAGGWIPVSSDRYQNPSIAYNPTQGTVRPSI--EIHAAAVQQPRVNIAELPAA 180

Query: 199 APSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYMTPPEQPAQQVFQPGSVFT 258
            P+S   A G PV+GVIDGKFESGYLVTVT+G+EKLKGVLY  P     Q   Q G   +
Sbjct: 181 RPAS---AAGSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQGAAPQISKQYGIFAS 240

Query: 259 KDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS 318
           K      +   QRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS
Sbjct: 241 KSDNAHPSLGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS 300

Query: 319 RMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLRTGQIISHAVPLQQLLPGTD 378
           RMIGELWNKLNETEK VYQEKA+KDKERYRIEME+YRE+LRTGQ+IS AVPLQQ LP  D
Sbjct: 301 RMIGELWNKLNETEKVVYQEKALKDKERYRIEMEDYRERLRTGQVISDAVPLQQRLPEPD 360

Query: 379 LNMVYAADKNEETEGGELPHMPYNDTIYVEDKEEEEEEEEDDDDEEEG--AAAPQGVGNV 438
           ++MV A  K EETEGG+ P  P ND+   E   E+++  + D D EE           NV
Sbjct: 361 VDMVEADMKLEETEGGDSPQTPENDSSSGESDFEDDKTADKDLDMEESPVVGVVDESMNV 420

Query: 439 DVNVLAE 444
           DV V AE
Sbjct: 421 DVEVTAE 422

[Close]
BLAST of CmoCh08G009970 vs. TrEMBL
Match: A0A061EKA6_THECC (HMG box protein with ARID/BRIGHT DNA-binding domain isoform 1 OS=Theobroma cacao GN=TCM_020322 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 1.6e-138
Identity = 283/428 (66.12%), Postives = 316/428 (73.83%), Query Frame = 1 

Query: 19  MTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPI 78
           M STS A    LA+ E  SN  PYPPP   YED+ A+PKLFMA+LEKLH+ MGTKFMIPI
Sbjct: 1   MASTSFAKQSLLAMKEPASNYNPYPPPLARYEDVAANPKLFMATLEKLHATMGTKFMIPI 60

Query: 79  IGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHH 138
           IGGKELDLHRLFVEVTARGG+EK+I ERRWKEVT++F FPSTATNASFVLRKYY+SL+HH
Sbjct: 61  IGGKELDLHRLFVEVTARGGIEKIISERRWKEVTAIFNFPSTATNASFVLRKYYVSLLHH 120

Query: 139 FEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAV 198
           +EQIYFFKA GW P  SD    PS    PTQGT+   +      A  QQP+    ELPA 
Sbjct: 121 YEQIYFFKAGGWIPVSSDRYQNPSIAYNPTQGTVRPSI--EIHAAAVQQPRVNIAELPAA 180

Query: 199 A-PSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYMTPPEQPAQQVFQPGSVF 258
           A P+S   A G PV+GVIDGKFESGYLVTVT+G+EKLKGVLY  P     Q   Q G   
Sbjct: 181 ARPAS---AAGSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQGAAPQISKQYGIFA 240

Query: 259 TKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREI 318
           +K      +   QRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREI
Sbjct: 241 SKSDNAHPSLGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREI 300

Query: 319 SRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLRTGQIISHAVPLQQLLPGT 378
           SRMIGELWNKLNETEK VYQEKA+KDKERYRIEME+YRE+LRTGQ+IS AVPLQQ LP  
Sbjct: 301 SRMIGELWNKLNETEKVVYQEKALKDKERYRIEMEDYRERLRTGQVISDAVPLQQRLPEP 360

Query: 379 DLNMVYAADKNEETEGGELPHMPYNDTIYVEDKEEEEEEEEDDDDEEEG--AAAPQGVGN 438
           D++MV A  K EETEGG+ P  P ND+   E   E+++  + D D EE           N
Sbjct: 361 DVDMVEADMKLEETEGGDSPQTPENDSSSGESDFEDDKTADKDLDMEESPVVGVVDESMN 420

Query: 439 VDVNVLAE 444
           VDV V AE
Sbjct: 421 VDVEVTAE 423

[Close]
BLAST of CmoCh08G009970 vs. TrEMBL
Match: F6GWG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g00130 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.0e-133
Identity = 285/492 (57.93%), Postives = 342/492 (69.51%), Query Frame = 1 

Query: 1   MVEEERTE---AGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPK 60
           M E+ +TE    G    KEL MTS SSA        E  SN  PYPPP   YED+++ PK
Sbjct: 1   MGEQGKTEEGGGGGGGGKELGMTSQSSANQSPSLRNETVSNYHPYPPPLAKYEDIVSSPK 60

Query: 61  LFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKF 120
           LFM +LEKLH++MGTKFMIPIIGGKELDLHRLFVEVT+RGGLEK+IRERRWKEVT+VF F
Sbjct: 61  LFMGTLEKLHAVMGTKFMIPIIGGKELDLHRLFVEVTSRGGLEKIIRERRWKEVTAVFSF 120

Query: 121 PSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLP 180
           PSTATNASFVLRKYY+SL+HH+EQIYFFKA GW P  +D+S +PS  P+P+ G    +LP
Sbjct: 121 PSTATNASFVLRKYYVSLLHHYEQIYFFKAQGWAPISADASQSPSITPVPSHGLAEPVLP 180

Query: 181 -PSNRPAP-QQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLK 240
            P ++PA  QQQ  ++A   P  +P+S   +   PV+GVIDGKFESGYLVTVT+G EKLK
Sbjct: 181 SPESQPAGIQQQRISSADIFPGASPAS---STASPVIGVIDGKFESGYLVTVTIGTEKLK 240

Query: 241 GVLYMTPPEQPAQQVFQPGSVFTKD-GTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSG 300
           GVLY   P+ PA+QV Q  SV T +  +T   P+  RRRRRKKSEIK+RDPAHPKPNRSG
Sbjct: 241 GVLY-EAPQTPARQVPQYFSVITNNTESTPAAPTVHRRRRRKKSEIKKRDPAHPKPNRSG 300

Query: 301 YNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENY 360
           YNFFFAEQHARLKPLHPGKDREISRMIGELW KL E EK VYQEKA+KDKERYR+EME+Y
Sbjct: 301 YNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVKDKERYRVEMEDY 360

Query: 361 REKLRTGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYVEDKEEEE 420
           RE+L+ GQIIS AVP+QQ LP  D++MV A  K  E EGGE P  P N++         +
Sbjct: 361 RERLKMGQIISDAVPIQQRLPHADVDMVEAEAKT-EMEGGESPQTPENES------SSGK 420

Query: 421 EEEEDDDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTATAIIQESSTVKDDKEVFAG 480
            + +DDD   E     +    V V V   E          +  ++    T  +++   +G
Sbjct: 421 TDSDDDDKTAEKEFDMETYPGVGVGVEGGE---------CSNVVVVGMETSVEEETYESG 472

Query: 481 HAVVMVDVANEE 487
             V  V V +EE
Sbjct: 481 KRVEKVGVESEE 472

[Close]
BLAST of CmoCh08G009970 vs. TrEMBL
Match: A5BNN4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021289 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 8.4e-132
Identity = 275/471 (58.39%), Postives = 333/471 (70.70%), Query Frame = 1 

Query: 19  MTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPI 78
           MTS SSA        E  SN  PYPPP   YED+++ PKLFM +LEKLH++MGTKFMIPI
Sbjct: 1   MTSQSSANQSPSLRNETVSNYHPYPPPLAKYEDIVSSPKLFMGTLEKLHAVMGTKFMIPI 60

Query: 79  IGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHH 138
           IGGKELDLHRLFVEVT+RGGLEK+IRERRWKEVT+VF FPSTATNASFVLRKYY+SL+HH
Sbjct: 61  IGGKELDLHRLFVEVTSRGGLEKIIRERRWKEVTAVFSFPSTATNASFVLRKYYVSLLHH 120

Query: 139 FEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLP-PSNRPAPQQQPQTTATEL-P 198
           +EQIYFFKA GW P  +D+S +PS  P+P+ G    +LP P ++PA  QQ + ++ ++ P
Sbjct: 121 YEQIYFFKAQGWAPISADASQSPSITPVPSHGLAEPVLPSPESQPAGIQQQRISSADIFP 180

Query: 199 AVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYMTPPEQPAQQVFQPGSV 258
             +P+S   +   PV+GVIDGKFESGYLVTVT+G EKLKGVLY   P+ PA+QV Q  SV
Sbjct: 181 GASPASSTAS---PVIGVIDGKFESGYLVTVTIGTEKLKGVLY-EAPQTPARQVPQYFSV 240

Query: 259 FTKD-GTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR 318
            T +  +T   P+  RRRRRKKSEIK+RDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR
Sbjct: 241 ITNNTESTPAAPTVHRRRRRKKSEIKKRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDR 300

Query: 319 EISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLRTGQIISHAVPLQQLLP 378
           EISRMIGELW KL E EK VYQEKA+KDKERYR+EME+YRE+L+ GQIIS AVP+QQ LP
Sbjct: 301 EISRMIGELWTKLKENEKAVYQEKAVKDKERYRVEMEDYRERLKMGQIISDAVPIQQRLP 360

Query: 379 GTDLNMVYAADKNEETEGGELPHMPYNDTIYVEDKEEEEEEEEDDDDEEEGAAAPQGVGN 438
             D++MV A  K  E EGGE P  P N++         + + +DDD   E     +    
Sbjct: 361 HADVDMVEAEAKT-EMEGGESPQTPENES------SSGKTDSDDDDKTAEKEFDMETYPG 420

Query: 439 VDVNVLAEEERCETRPEPTATAIIQESSTVKDDKEVFAGHAVVMVDVANEE 487
           V V V   E          +  ++    T  +++   +G  V  V V +EE
Sbjct: 421 VGVGVEGGE---------CSNVVVVGMETSVEEETYESGKRVEKVGVESEE 451

[Close]
BLAST of CmoCh08G009970 vs. TAIR10
Match: AT1G04880.1 (AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 377.9 bits (969), Expect = 1.3e-104
Identity = 233/467 (49.89%), Postives = 289/467 (61.88%), Query Frame = 1 

Query: 45  PQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIR 104
           P+ TYE ++ADP+LFM SLE+LHS++GTKFM+PIIGG++LDLH+LFVEVT+RGG+ K++ 
Sbjct: 21  PEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILN 80

Query: 105 ERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAV 164
           ERRWKEVT+ F FP TATNAS+VLRKYY SL++++EQIYFF++ G  P   DS  +PSA 
Sbjct: 81  ERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIP--PDSMQSPSAR 140

Query: 165 PIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSV--PPAGGFPVVGVIDGKFESG 224
           P   QG +        RP+ Q+    T T  P +  +        G  VVGVIDGKFESG
Sbjct: 141 PCFIQGAI--------RPS-QELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESG 200

Query: 225 YLVTVTVGNEKLKGVLYMTPPEQPA--QQVFQPGSVFTKDGTTSTTPS------AQRRRR 284
           YLVTVT+G+E+LKGVLY   P+     Q   Q   V       S  P        +RRRR
Sbjct: 201 YLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRR 260

Query: 285 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNETEKT 344
           RKKSEIKRRDP HPKPNRSGYNFFFAEQHARLKPLHPGKDR+ISRMIGELWNKLNE EK 
Sbjct: 261 RKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKL 320

Query: 345 VYQEKAMKDKERYRIEMENYREKLRTGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGG 404
           +YQ KAM+DKERYR EME+YREK + GQ+IS+AVPLQQ LP  +++M  A          
Sbjct: 321 IYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNVDMAEA---------- 380

Query: 405 ELPHMPYNDTIYVEDKEEEEEEEEDDDDEEEGAAAPQGVGNVDVNVLAEEERC-----ET 464
           +LP             E EE++EE D     G + P    +++ +   EE          
Sbjct: 381 DLP-----------IDEVEEDDEEGDSSGSSGESEPHDDQSIETDPELEEPSLNPSGPNL 440

Query: 465 RPEPTATAIIQESSTVKDDKEVFAGHAVVMVDVANEEPEPTPTAIVE 497
            P PT   +  +            G  V+      +  EPT     E
Sbjct: 441 NPNPTEIVVAPKEKN---------GDVVMETSPLKKADEPTVAVTAE 446

[Close]
BLAST of CmoCh08G009970 vs. TAIR10
Match: AT1G76110.1 (AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 249.6 bits (636), Expect = 5.5e-66
Identity = 144/326 (44.17%), Postives = 199/326 (61.04%), Query Frame = 1 

Query: 35  APSNCVPYPPPQTTYEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVT 94
           +P+    YP P   +E ++ D  +F  +L + HSIM TKFMIP+IGGKELDLH L+VEVT
Sbjct: 20  SPAKIKEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVT 79

Query: 95  ARGGLEKVIRERRWKEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKV 154
            RGG EKV+ E++W+EV  VF+F +T T+ASFVLRK+YL+L+ H+EQ++ F A G  P +
Sbjct: 80  RRGGYEKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARG--PLL 139

Query: 155 SDSSPTPSAVPIPTQGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGV 214
              +   +      +  +    PPS R           T  P+   SS      F  +G 
Sbjct: 140 HPIATFHANPSTSKEMALVEYTPPSIR--------YHNTHPPSQGSSS------FTAIGT 199

Query: 215 IDGKFESGYLVTVTVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPSAQRRRR 274
           I+GKF+ GYLV V +G+E L GVLY +    P+     P +V             +RRR 
Sbjct: 200 IEGKFDCGYLVKVKLGSEILNGVLYHSAQPGPSS---SPTAVLNNAVVPYVETGRRRRRL 259

Query: 275 RKKSEIKRR-DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNETEK 334
            K+   +RR DP +PKPNRSGYNFFFAE+H +LK L+P K+RE +++IGE W+ L+  E+
Sbjct: 260 GKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEER 319

Query: 335 TVYQEKAMKDKERYRIEMENYREKLR 360
            VYQ+  +KDKERY+ E+  YRE LR
Sbjct: 320 MVYQDIGLKDKERYQRELNEYRETLR 326

[Close]
BLAST of CmoCh08G009970 vs. TAIR10
Match: AT3G13350.1 (AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 227.3 bits (578), Expect = 2.9e-59
Identity = 129/319 (40.44%), Postives = 182/319 (57.05%), Query Frame = 1 

Query: 49  YEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRW 108
           Y+DL+ +  LF   L     +      +P +GG  LDLHRLF+EVT+RGG+E+V+++R+W
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 109 KEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPT 168
           KEV   F FP+T T+ASFVLRKYYL  +   E +Y+ +                      
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK--------------------- 155

Query: 169 QGTMTSMLPPSNRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVT 228
                   P S+  +  +  ++ A E P        P  G+ V G IDGKF+SGYLVT+ 
Sbjct: 156 --------PVSSLQSTDEALKSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMK 215

Query: 229 VGNEKLKGVLYMTP--PEQPAQQVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPA 288
           +G+++LKGVLY  P  P Q  Q +  P ++            + +RR RKKS++   D  
Sbjct: 216 LGSQELKGVLYHIPQTPSQSQQTMETPSAIV----------QSSQRRHRKKSKLAVVDTQ 275

Query: 289 HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKER 348
            PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W+ L E+EK VYQ+K +KD ER
Sbjct: 276 KPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVER 315

Query: 349 YRIEMENYREKLRTGQIIS 366
           YRIEM  Y+    +G   S
Sbjct: 336 YRIEMLEYKSSHESGATAS 315

[Close]
BLAST of CmoCh08G009970 vs. TAIR10
Match: AT1G55650.1 (AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 186.4 bits (472), Expect = 5.7e-47
Identity = 120/320 (37.50%), Postives = 175/320 (54.69%), Query Frame = 1 

Query: 49  YEDLIADPKLFMASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRW 108
           Y+D++ +P+LF   L   H     KF IPI+GGK LDLHRLF EVT+RGGLEKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 109 KEVTSVFKFPSTATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPT 168
           KEV   F F +T TN++FVLRK YL ++  FE +Y+F+A             P +     
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQA-------------PLSTFWEK 149

Query: 169 QGTMTSMLPPS-NRPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTV 228
           +  +  ++  S NR    Q+          + P +V       + G+IDGKFESGYL++ 
Sbjct: 150 EKALKLLIEKSANRDKDSQE----------LKPGTV-------ITGIIDGKFESGYLIST 209

Query: 229 TVGNEKLKGVLYMTPPEQPAQQVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAH 288
            VG+EKLKG+LY   PE             TK G          +++ K S+     P  
Sbjct: 210 KVGSEKLKGMLYHISPE-------------TKRG----------KKKAKSSQGDSHKP-- 269

Query: 289 PKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERY 348
           PK  R+GYNFF AEQ  R+K  + G+     +  G +W  L+E+++ VY EK+ +D +RY
Sbjct: 270 PKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRY 294

Query: 349 RIEMENYREKL--RTGQIIS 366
           ++E+  YR  +  R  +I++
Sbjct: 330 KMEILQYRSLMESRVAEIVA 294

[Close]
BLAST of CmoCh08G009970 vs. NCBI nr
Match: gi|778668409|ref|XP_011649093.1| (PREDICTED: high mobility group B protein 15 isoform X4 [Cucumis sativus])

HSP 1 Score: 701.8 bits (1810), Expect = 1.1e-198
Identity = 377/501 (75.25%), Postives = 420/501 (83.83%), Query Frame = 1 

Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           M+EEERTEAGW S+KELTM STS AGGKQL V+E  SNCVPYPPPQTTYED+IA+ K+FM
Sbjct: 63  MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 122

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
            +LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVT+RGG+EKVIRERRWKEVTSVF FPST
Sbjct: 123 TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 182

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYY+SL+HHFEQIYFFKAVGWTP  SDSSP PSA  IPTQG +TSMLPPS+
Sbjct: 183 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQG-VTSMLPPSD 242

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
             A   QPQ+TATELPAV+PSS  P GGFPV+GVIDGKF+SGYLVTVTVG EKLKGVLY 
Sbjct: 243 NQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ 302

Query: 241 TPPEQPAQ-QVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300
             PEQP+Q QV QP   F KDG+T TTP+A RRRRRKKSEIKRRDPAHPKPNRSGYNFFF
Sbjct: 303 A-PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 362

Query: 301 AEQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLR 360
           AEQHARLKPL+PGKDREISRMIG+LWNKL E+E+TVYQEKAMKDKERYRIEM +YREKLR
Sbjct: 363 AEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLR 422

Query: 361 TGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYV----------ED 420
           TGQIIS AVPLQQ LP  DLNMVY  DKNEETEGGE    P +DT YV          E 
Sbjct: 423 TGQIISDAVPLQQRLPEPDLNMVY-GDKNEETEGGE-SQTPDHDTSYVEGDSGEYKTEEK 482

Query: 421 KEEEEEEEEDDDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTATAIIQESSTVKDDK 480
           +E+EE++EED++D+ E  A+PQG+GNVDVN+L EEE+CETR       + +ESSTV D K
Sbjct: 483 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVEN-VRKESSTVGDKK 542

Query: 481 EVFAGHAVVMVDVANEEPEPT 491
           EV AG +V++   A E PEPT
Sbjct: 543 EVLAGDSVMVEVEAKEVPEPT 558

[Close]
BLAST of CmoCh08G009970 vs. NCBI nr
Match: gi|778668422|ref|XP_011649098.1| (PREDICTED: high mobility group B protein 15 isoform X6 [Cucumis sativus])

HSP 1 Score: 701.8 bits (1810), Expect = 1.1e-198
Identity = 377/501 (75.25%), Postives = 420/501 (83.83%), Query Frame = 1 

Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           M+EEERTEAGW S+KELTM STS AGGKQL V+E  SNCVPYPPPQTTYED+IA+ K+FM
Sbjct: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
            +LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVT+RGG+EKVIRERRWKEVTSVF FPST
Sbjct: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYY+SL+HHFEQIYFFKAVGWTP  SDSSP PSA  IPTQG +TSMLPPS+
Sbjct: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQG-VTSMLPPSD 180

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
             A   QPQ+TATELPAV+PSS  P GGFPV+GVIDGKF+SGYLVTVTVG EKLKGVLY 
Sbjct: 181 NQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ 240

Query: 241 TPPEQPAQ-QVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300
             PEQP+Q QV QP   F KDG+T TTP+A RRRRRKKSEIKRRDPAHPKPNRSGYNFFF
Sbjct: 241 A-PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300

Query: 301 AEQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLR 360
           AEQHARLKPL+PGKDREISRMIG+LWNKL E+E+TVYQEKAMKDKERYRIEM +YREKLR
Sbjct: 301 AEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLR 360

Query: 361 TGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYV----------ED 420
           TGQIIS AVPLQQ LP  DLNMVY  DKNEETEGGE    P +DT YV          E 
Sbjct: 361 TGQIISDAVPLQQRLPEPDLNMVY-GDKNEETEGGE-SQTPDHDTSYVEGDSGEYKTEEK 420

Query: 421 KEEEEEEEEDDDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTATAIIQESSTVKDDK 480
           +E+EE++EED++D+ E  A+PQG+GNVDVN+L EEE+CETR       + +ESSTV D K
Sbjct: 421 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVEN-VRKESSTVGDKK 480

Query: 481 EVFAGHAVVMVDVANEEPEPT 491
           EV AG +V++   A E PEPT
Sbjct: 481 EVLAGDSVMVEVEAKEVPEPT 496

[Close]
BLAST of CmoCh08G009970 vs. NCBI nr
Match: gi|778668405|ref|XP_011649092.1| (PREDICTED: high mobility group B protein 15 isoform X3 [Cucumis sativus])

HSP 1 Score: 701.8 bits (1810), Expect = 1.1e-198
Identity = 377/501 (75.25%), Postives = 420/501 (83.83%), Query Frame = 1 

Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           M+EEERTEAGW S+KELTM STS AGGKQL V+E  SNCVPYPPPQTTYED+IA+ K+FM
Sbjct: 64  MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 123

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
            +LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVT+RGG+EKVIRERRWKEVTSVF FPST
Sbjct: 124 TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 183

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYY+SL+HHFEQIYFFKAVGWTP  SDSSP PSA  IPTQG +TSMLPPS+
Sbjct: 184 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQG-VTSMLPPSD 243

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
             A   QPQ+TATELPAV+PSS  P GGFPV+GVIDGKF+SGYLVTVTVG EKLKGVLY 
Sbjct: 244 NQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ 303

Query: 241 TPPEQPAQ-QVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300
             PEQP+Q QV QP   F KDG+T TTP+A RRRRRKKSEIKRRDPAHPKPNRSGYNFFF
Sbjct: 304 A-PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 363

Query: 301 AEQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLR 360
           AEQHARLKPL+PGKDREISRMIG+LWNKL E+E+TVYQEKAMKDKERYRIEM +YREKLR
Sbjct: 364 AEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLR 423

Query: 361 TGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYV----------ED 420
           TGQIIS AVPLQQ LP  DLNMVY  DKNEETEGGE    P +DT YV          E 
Sbjct: 424 TGQIISDAVPLQQRLPEPDLNMVY-GDKNEETEGGE-SQTPDHDTSYVEGDSGEYKTEEK 483

Query: 421 KEEEEEEEEDDDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTATAIIQESSTVKDDK 480
           +E+EE++EED++D+ E  A+PQG+GNVDVN+L EEE+CETR       + +ESSTV D K
Sbjct: 484 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVEN-VRKESSTVGDKK 543

Query: 481 EVFAGHAVVMVDVANEEPEPT 491
           EV AG +V++   A E PEPT
Sbjct: 544 EVLAGDSVMVEVEAKEVPEPT 559

[Close]
BLAST of CmoCh08G009970 vs. NCBI nr
Match: gi|778668401|ref|XP_011649091.1| (PREDICTED: high mobility group B protein 15 isoform X2 [Cucumis sativus])

HSP 1 Score: 701.8 bits (1810), Expect = 1.1e-198
Identity = 377/501 (75.25%), Postives = 420/501 (83.83%), Query Frame = 1 

Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           M+EEERTEAGW S+KELTM STS AGGKQL V+E  SNCVPYPPPQTTYED+IA+ K+FM
Sbjct: 69  MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 128

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
            +LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVT+RGG+EKVIRERRWKEVTSVF FPST
Sbjct: 129 TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 188

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYY+SL+HHFEQIYFFKAVGWTP  SDSSP PSA  IPTQG +TSMLPPS+
Sbjct: 189 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQG-VTSMLPPSD 248

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
             A   QPQ+TATELPAV+PSS  P GGFPV+GVIDGKF+SGYLVTVTVG EKLKGVLY 
Sbjct: 249 NQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ 308

Query: 241 TPPEQPAQ-QVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300
             PEQP+Q QV QP   F KDG+T TTP+A RRRRRKKSEIKRRDPAHPKPNRSGYNFFF
Sbjct: 309 A-PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 368

Query: 301 AEQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLR 360
           AEQHARLKPL+PGKDREISRMIG+LWNKL E+E+TVYQEKAMKDKERYRIEM +YREKLR
Sbjct: 369 AEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLR 428

Query: 361 TGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYV----------ED 420
           TGQIIS AVPLQQ LP  DLNMVY  DKNEETEGGE    P +DT YV          E 
Sbjct: 429 TGQIISDAVPLQQRLPEPDLNMVY-GDKNEETEGGE-SQTPDHDTSYVEGDSGEYKTEEK 488

Query: 421 KEEEEEEEEDDDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTATAIIQESSTVKDDK 480
           +E+EE++EED++D+ E  A+PQG+GNVDVN+L EEE+CETR       + +ESSTV D K
Sbjct: 489 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVEN-VRKESSTVGDKK 548

Query: 481 EVFAGHAVVMVDVANEEPEPT 491
           EV AG +V++   A E PEPT
Sbjct: 549 EVLAGDSVMVEVEAKEVPEPT 564

[Close]
BLAST of CmoCh08G009970 vs. NCBI nr
Match: gi|778668398|ref|XP_011649090.1| (PREDICTED: high mobility group B protein 15 isoform X1 [Cucumis sativus])

HSP 1 Score: 701.8 bits (1810), Expect = 1.1e-198
Identity = 377/501 (75.25%), Postives = 420/501 (83.83%), Query Frame = 1 

Query: 1   MVEEERTEAGWDSKKELTMTSTSSAGGKQLAVVEAPSNCVPYPPPQTTYEDLIADPKLFM 60
           M+EEERTEAGW S+KELTM STS AGGKQL V+E  SNCVPYPPPQTTYED+IA+ K+FM
Sbjct: 71  MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 130

Query: 61  ASLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTARGGLEKVIRERRWKEVTSVFKFPST 120
            +LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVT+RGG+EKVIRERRWKEVTSVF FPST
Sbjct: 131 TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 190

Query: 121 ATNASFVLRKYYLSLIHHFEQIYFFKAVGWTPKVSDSSPTPSAVPIPTQGTMTSMLPPSN 180
           ATNASFVLRKYY+SL+HHFEQIYFFKAVGWTP  SDSSP PSA  IPTQG +TSMLPPS+
Sbjct: 191 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQG-VTSMLPPSD 250

Query: 181 RPAPQQQPQTTATELPAVAPSSVPPAGGFPVVGVIDGKFESGYLVTVTVGNEKLKGVLYM 240
             A   QPQ+TATELPAV+PSS  P GGFPV+GVIDGKF+SGYLVTVTVG EKLKGVLY 
Sbjct: 251 NQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ 310

Query: 241 TPPEQPAQ-QVFQPGSVFTKDGTTSTTPSAQRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300
             PEQP+Q QV QP   F KDG+T TTP+A RRRRRKKSEIKRRDPAHPKPNRSGYNFFF
Sbjct: 311 A-PEQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 370

Query: 301 AEQHARLKPLHPGKDREISRMIGELWNKLNETEKTVYQEKAMKDKERYRIEMENYREKLR 360
           AEQHARLKPL+PGKDREISRMIG+LWNKL E+E+TVYQEKAMKDKERYRIEM +YREKLR
Sbjct: 371 AEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLR 430

Query: 361 TGQIISHAVPLQQLLPGTDLNMVYAADKNEETEGGELPHMPYNDTIYV----------ED 420
           TGQIIS AVPLQQ LP  DLNMVY  DKNEETEGGE    P +DT YV          E 
Sbjct: 431 TGQIISDAVPLQQRLPEPDLNMVY-GDKNEETEGGE-SQTPDHDTSYVEGDSGEYKTEEK 490

Query: 421 KEEEEEEEEDDDDEEEGAAAPQGVGNVDVNVLAEEERCETRPEPTATAIIQESSTVKDDK 480
           +E+EE++EED++D+ E  A+PQG+GNVDVN+L EEE+CETR       + +ESSTV D K
Sbjct: 491 EEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVEN-VRKESSTVGDKK 550

Query: 481 EVFAGHAVVMVDVANEEPEPT 491
           EV AG +V++   A E PEPT
Sbjct: 551 EVLAGDSVMVEVEAKEVPEPT 566

The following BLAST results are available for this feature:
BLAST of CmoCh08G009970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HMG15_ARATH2.4e-10349.89High mobility group B protein 15 OS=Arabidopsis thaliana GN=HMGB15 PE=2 SV=1[more]
HMGB9_ARATH9.7e-6544.17High mobility group B protein 9 OS=Arabidopsis thaliana GN=HMGB9 PE=2 SV=1[more]
HMG10_ARATH5.1e-5840.44High mobility group B protein 10 OS=Arabidopsis thaliana GN=HMGB10 PE=2 SV=1[more]
HMG11_ARATH1.0e-4537.50Putative high mobility group B protein 11 OS=Arabidopsis thaliana GN=HMGB11 PE=3... [more]
ARID2_HUMAN6.0e-1440.91AT-rich interactive domain-containing protein 2 OS=Homo sapiens GN=ARID2 PE=1 SV... [more]
BLAST of CmoCh08G009970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL59_CUCSA7.9e-19975.25Uncharacterized protein OS=Cucumis sativus GN=Csa_2G138760 PE=4 SV=1[more]
A0A061ELP2_THECC2.4e-13966.04HMG box protein with ARID/BRIGHT DNA-binding domain isoform 2 OS=Theobroma cacao... [more]
A0A061EKA6_THECC1.6e-13866.12HMG box protein with ARID/BRIGHT DNA-binding domain isoform 1 OS=Theobroma cacao... [more]
F6GWG2_VITVI2.0e-13357.93Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g00130 PE=4 SV=... [more]
A5BNN4_VITVI8.4e-13258.39Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021289 PE=4 SV=1[more]
BLAST of CmoCh08G009970 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04880.11.3e-10449.89 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding d... [more]
AT1G76110.15.5e-6644.17 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding d... [more]
AT3G13350.12.9e-5940.44 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding d... [more]
AT1G55650.15.7e-4737.50 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding d... [more]
BLAST of CmoCh08G009970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778668409|ref|XP_011649093.1|1.1e-19875.25PREDICTED: high mobility group B protein 15 isoform X4 [Cucumis sativus][more]
gi|778668422|ref|XP_011649098.1|1.1e-19875.25PREDICTED: high mobility group B protein 15 isoform X6 [Cucumis sativus][more]
gi|778668405|ref|XP_011649092.1|1.1e-19875.25PREDICTED: high mobility group B protein 15 isoform X3 [Cucumis sativus][more]
gi|778668401|ref|XP_011649091.1|1.1e-19875.25PREDICTED: high mobility group B protein 15 isoform X2 [Cucumis sativus][more]
gi|778668398|ref|XP_011649090.1|1.1e-19875.25PREDICTED: high mobility group B protein 15 isoform X1 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001606ARID_dom
IPR009071HMG_box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0006333 chromatin assembly or disassembly
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G009970.1CmoCh08G009970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001606ARID DNA-binding domainGENE3DG3DSA:1.10.150.60coord: 55..146
score: 6.8
IPR001606ARID DNA-binding domainPFAMPF01388ARIDcoord: 57..140
score: 7.9
IPR001606ARID DNA-binding domainSMARTSM00501bright_3coord: 54..145
score: 9.5
IPR001606ARID DNA-binding domainPROFILEPS51011ARIDcoord: 53..144
score: 25
IPR001606ARID DNA-binding domainunknownSSF46774ARID-likecoord: 49..153
score: 1.83
IPR009071High mobility group box domainGENE3DG3DSA:1.10.30.10coord: 283..364
score: 4.1
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 288..355
score: 5.3
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 287..356
score: 7.3
IPR009071High mobility group box domainPROFILEPS50118HMG_BOX_2coord: 288..355
score: 15
IPR009071High mobility group box domainunknownSSF47095HMG-boxcoord: 281..360
score: 8.12
NoneNo IPR availableunknownCoilCoilcoord: 407..427
score: -coord: 337..357
scor
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 24..146
score: 1.4E-119coord: 272..383
score: 1.4E-119coord: 162..237
score: 1.4E
NoneNo IPR availablePANTHERPTHR13711:SF202HIGH MOBILITY GROUP B PROTEIN 10-RELATEDcoord: 24..146
score: 1.4E-119coord: 162..237
score: 1.4E-119coord: 272..383
score: 1.4E
NoneNo IPR availableSMARTSM01014ARID_2coord: 50..140
score: 7.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh08G009970Cucsa.193910Cucumber (Gy14) v1cgycmoB0568
CmoCh08G009970CmaCh08G010250Cucurbita maxima (Rimu)cmacmoB912
CmoCh08G009970Cla002956Watermelon (97103) v1cmowmB867
CmoCh08G009970Csa2G138760Cucumber (Chinese Long) v2cmocuB871
CmoCh08G009970MELO3C020449Melon (DHL92) v3.5.1cmomeB828
CmoCh08G009970ClCG06G007770Watermelon (Charleston Gray)cmowcgB799
CmoCh08G009970CSPI02G09120Wild cucumber (PI 183967)cmocpiB882
CmoCh08G009970Lsi09G011460Bottle gourd (USVL1VR-Ls)cmolsiB797
CmoCh08G009970Cp4.1LG17g03310Cucurbita pepo (Zucchini)cmocpeB853
CmoCh08G009970MELO3C020449.2Melon (DHL92) v3.6.1cmomedB935
CmoCh08G009970CsaV3_2G011520Cucumber (Chinese Long) v3cmocucB1031
CmoCh08G009970Cla97C06G117510Watermelon (97103) v2cmowmbB896
CmoCh08G009970CsGy2G009370Cucumber (Gy14) v2cgybcmoB257
CmoCh08G009970Carg11022Silver-seed gourdcarcmoB1452
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G009970Cucumber (Gy14) v2cgybcmoB431
CmoCh08G009970Melon (DHL92) v3.6.1cmomedB940
CmoCh08G009970Silver-seed gourdcarcmoB0326
CmoCh08G009970Silver-seed gourdcarcmoB1061
CmoCh08G009970Silver-seed gourdcarcmoB1289
CmoCh08G009970Cucumber (Chinese Long) v3cmocucB1032
CmoCh08G009970Cucumber (Chinese Long) v3cmocucB1040
CmoCh08G009970Watermelon (97103) v2cmowmbB886
CmoCh08G009970Watermelon (97103) v2cmowmbB903
CmoCh08G009970Wax gourdcmowgoB1084
CmoCh08G009970Cucurbita moschata (Rifu)cmocmoB233
CmoCh08G009970Cucurbita moschata (Rifu)cmocmoB310
CmoCh08G009970Cucurbita moschata (Rifu)cmocmoB484
CmoCh08G009970Cucurbita moschata (Rifu)cmocmoB446
CmoCh08G009970Cucumber (Gy14) v1cgycmoB0721
CmoCh08G009970Cucurbita maxima (Rimu)cmacmoB279
CmoCh08G009970Cucurbita maxima (Rimu)cmacmoB365
CmoCh08G009970Cucurbita maxima (Rimu)cmacmoB837
CmoCh08G009970Wild cucumber (PI 183967)cmocpiB883
CmoCh08G009970Cucumber (Chinese Long) v2cmocuB872
CmoCh08G009970Melon (DHL92) v3.5.1cmomeB832
CmoCh08G009970Watermelon (Charleston Gray)cmowcgB792
CmoCh08G009970Watermelon (97103) v1cmowmB856
CmoCh08G009970Cucurbita pepo (Zucchini)cmocpeB833
CmoCh08G009970Cucurbita pepo (Zucchini)cmocpeB865
CmoCh08G009970Bottle gourd (USVL1VR-Ls)cmolsiB823