CmoCh08G009870 (gene) Cucurbita moschata (Rifu)

NameCmoCh08G009870
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEthphon-induced protein
LocationCmo_Chr08 : 6429112 .. 6429942 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCGCTAACTCTAGCCCTAATCTCTTGATTTCGAAGTGGAAATTTCTCTTCTTATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACAGGCAGGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAGTGAGTGATTGTGATTCGAATTCAATTCATTTCGTTCCGATTTCATTTTCTAGGTTTTTTTTTTTTTTTGTGGAAGAAATTTATGTGAGACGATACTGACGGAATCTGCTCCGAATCGTATTGATTTCAGAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTCTGCGGCGGATAAAACGACGGCGTCTGGTAAGAAAAACGTAAGGACGGATACAGTTGCAGTGGCGTGAGTTCCGATGAAGAAATTTTGAGAAAAAGAACGGAAAACAGAGAAAGAAAAGGAAATTCAGATTCAAATGCGAGAGGAAAAGATTTGTGTTCTTCGAACACAGAAACAAAAAAAAAGAGAGAAAGAAATGGAAATTCAGATTGAGATTTCTTCCTGTGGAGAAGAATCGATTGGCAGAGGCTATACAGAACTGTTCTGCTTCAATCTCTTCACTCAGCTTTTCAATTTTTTGTTTAAATTATAAATAAAAAAAGTTTGAATTTCATATAAATTGTTACATGAACTAGAATCCTAATTTTTTAATTTTAATTTTAATTTTTAGATGGATGTAATTTTCTTTTGTTATTTTAAAATACAGGGCACAG

mRNA sequence

CTCTCGCTAACTCTAGCCCTAATCTCTTGATTTCGAAGTGGAAATTTCTCTTCTTATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACAGGCAGGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTCTGCGGCGGATAAAACGACGGCGTCTGGTAAGAAAAACGTAAGGACGGATACAGTTGCAGTGGCGTGAGTTCCGATGAAGAAATTTTGAGAAAAAGAACGGAAAACAGAGAAAGAAAAGGAAATTCAGATTCAAATGCGAGAGGAAAAGATTTGTGTTCTTCGAACACAGAAACAAAAAAAAAGAGAGAAAGAAATGGAAATTCAGATTGAGATTTCTTCCTGTGGAGAAGAATCGATTGGCAGAGGCTATACAGAACTGTTCTGCTTCAATCTCTTCACTCAGCTTTTCAATTTTTTGTTTAAATTATAAATAAAAAAAGTTTGAATTTCATATAAATTGTTACATGAACTAGAATCCTAATTTTTTAATTTTAATTTTAATTTTTAGATGGATGTAATTTTCTTTTGTTATTTTAAAATACAGGGCACAG

Coding sequence (CDS)

ATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACAGGCAGGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTCTGCGGCGGATAAAACGACGGCGTCTGGTAAGAAAAACGTAAGGACGGATACAGTTGCAGTGGCGTGA
BLAST of CmoCh08G009870 vs. TrEMBL
Match: A0A0A0LHK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G118280 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 8.8e-40
Identity = 83/96 (86.46%), Postives = 89/96 (92.71%), Query Frame = 1

Query: 1  MRNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDE 60
          MR GMRYH GG+DHR+ESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIE+DE
Sbjct: 1  MRTGMRYHAGGEDHRRESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEIDE 60

Query: 61 AQEKSWRM---SSSSAADKTTASGKKNVRTDTVAVA 94
          AQEKSWR+   SSSS+ADKTT + KKNVRTDTVAVA
Sbjct: 61 AQEKSWRISSSSSSSSADKTTTTNKKNVRTDTVAVA 96

BLAST of CmoCh08G009870 vs. TrEMBL
Match: A0A0B2QHL3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046293 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-25
Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1

Query: 2   RNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEA 61
           R+ M Y+ G +DH +E HFL+ACFLCR+PLG NRDIFMY+GNTPFCSKECRQEQIE+DE+
Sbjct: 20  RSSMFYYAGSEDHSEEPHFLQACFLCRKPLGQNRDIFMYRGNTPFCSKECRQEQIEIDES 79

Query: 62  QEKSWRMSSSSAADKT----TASGKKNVRTDTVAVA 94
           +EKSW++SS     ++     ++  K VRT TVAVA
Sbjct: 80  KEKSWKLSSKRGVRQSETNQNSTPNKAVRTGTVAVA 115

BLAST of CmoCh08G009870 vs. TrEMBL
Match: K7KE91_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G105400 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-25
Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1

Query: 2   RNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEA 61
           R+ M Y+ G +DH +E HFL+ACFLCR+PLG NRDIFMY+GNTPFCSKECRQEQIE+DE+
Sbjct: 20  RSSMFYYAGSEDHSEEPHFLQACFLCRKPLGQNRDIFMYRGNTPFCSKECRQEQIEIDES 79

Query: 62  QEKSWRMSSSSAADKT----TASGKKNVRTDTVAVA 94
           +EKSW++SS     ++     ++  K VRT TVAVA
Sbjct: 80  KEKSWKLSSKRGVRQSETNQNSTPNKAVRTGTVAVA 115

BLAST of CmoCh08G009870 vs. TrEMBL
Match: A0A0B2P1P9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_034403 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-25
Identity = 60/96 (62.50%), Postives = 75/96 (78.12%), Query Frame = 1

Query: 2   RNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEA 61
           R+ M Y+ G +DH +E HFL+ACFLCR+PLG NRDIFMY+GNTPFCSKECRQEQIE+DEA
Sbjct: 20  RSRMFYYAGSEDHYEEPHFLQACFLCRKPLGQNRDIFMYRGNTPFCSKECRQEQIEIDEA 79

Query: 62  QEKSWRMSSSSAADKT----TASGKKNVRTDTVAVA 94
           +EKSW++SS     ++     ++  K VRT TVAVA
Sbjct: 80  KEKSWKLSSKRGVRQSETNQNSTPNKAVRTGTVAVA 115

BLAST of CmoCh08G009870 vs. TrEMBL
Match: C6SZ02_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G117300 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-25
Identity = 60/96 (62.50%), Postives = 75/96 (78.12%), Query Frame = 1

Query: 2   RNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEA 61
           R+ M Y+ G +DH +E HFL+ACFLCR+PLG NRDIFMY+GNTPFCSKECRQEQIE+DEA
Sbjct: 20  RSRMFYYAGSEDHYEEPHFLQACFLCRKPLGQNRDIFMYRGNTPFCSKECRQEQIEIDEA 79

Query: 62  QEKSWRMSSSSAADKT----TASGKKNVRTDTVAVA 94
           +EKSW++SS     ++     ++  K VRT TVAVA
Sbjct: 80  KEKSWKLSSKRGVRQSETNQNSTPNKAVRTGTVAVA 115

BLAST of CmoCh08G009870 vs. TAIR10
Match: AT5G47060.1 (AT5G47060.1 Protein of unknown function (DUF581))

HSP 1 Score: 90.9 bits (224), Expect = 4.5e-19
Identity = 38/56 (67.86%), Postives = 49/56 (87.50%), Query Frame = 1

Query: 16  QESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEAQEKSWRMSSS 72
           Q+ HFL++CFLC++PLG NRDI+MY+G+TPFCS+ECRQEQIE DEA+EK   +S S
Sbjct: 93  QQPHFLDSCFLCKKPLGDNRDIYMYRGDTPFCSEECRQEQIERDEAKEKKQNLSHS 148

BLAST of CmoCh08G009870 vs. TAIR10
Match: AT2G44670.1 (AT2G44670.1 Protein of unknown function (DUF581))

HSP 1 Score: 87.0 bits (214), Expect = 6.5e-18
Identity = 45/83 (54.22%), Postives = 59/83 (71.08%), Query Frame = 1

Query: 16 QESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEAQEKSWRMSS----- 75
          +E HFLE+C LCR+ LG N DIFMY+G+  FCS ECR+EQIE DEA+E+ W+ SS     
Sbjct: 12 EEPHFLESCSLCRKHLGLNSDIFMYRGDKAFCSNECREEQIESDEAKERKWKKSSRSLRK 71

Query: 76 SSAADKTTASGKKNVRTDTVAVA 94
          +S+  K +A+G   VRT T+ VA
Sbjct: 72 NSSETKESAAG-NTVRTGTLVVA 93

BLAST of CmoCh08G009870 vs. TAIR10
Match: AT4G17670.1 (AT4G17670.1 Protein of unknown function (DUF581))

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-17
Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 1

Query: 7   YHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEAQEKSW 66
           Y+G G     + HFL++CFLC++ LG NRDIFMY+G+TPFCS+ECR+EQIE DEA+EK  
Sbjct: 68  YYGYG-----QPHFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEAKEKKQ 127

Query: 67  RMSSS----------SAADKTTASGKKNVRTDTVAVA 94
            +S+S          S++   T S     RT TVA A
Sbjct: 128 SLSTSVKAMRRNEKRSSSSSPTRSRNYAFRTGTVAAA 159

BLAST of CmoCh08G009870 vs. TAIR10
Match: AT1G78020.1 (AT1G78020.1 Protein of unknown function (DUF581))

HSP 1 Score: 66.6 bits (161), Expect = 9.1e-12
Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 1

Query: 2   RNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEA 61
           R  +R H G  D     HFL +C LC R L   RDI+MY+G+  FCS ECRQEQ+  DE 
Sbjct: 73  RGNLRRHSG--DFSDAGHFLRSCALCERLLVPGRDIYMYRGDKAFCSSECRQEQMAQDER 132

Query: 62  QEK 65
           +EK
Sbjct: 133 KEK 133

BLAST of CmoCh08G009870 vs. TAIR10
Match: AT5G49120.1 (AT5G49120.1 Protein of unknown function (DUF581))

HSP 1 Score: 61.6 bits (148), Expect = 2.9e-10
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 1

Query: 16  QESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEAQEKSWRMSSSSAAD 75
           Q+S FLE CFLCRR L   +DI+MYKG+  FCS ECR +Q+ MDE  E+S R    S  D
Sbjct: 64  QDSGFLEHCFLCRRKLLPAKDIYMYKGDRAFCSVECRSKQMIMDE--EESLRREYCSLMD 121

BLAST of CmoCh08G009870 vs. NCBI nr
Match: gi|700206286|gb|KGN61405.1| (hypothetical protein Csa_2G118280 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-39
Identity = 83/96 (86.46%), Postives = 89/96 (92.71%), Query Frame = 1

Query: 1  MRNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDE 60
          MR GMRYH GG+DHR+ESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIE+DE
Sbjct: 1  MRTGMRYHAGGEDHRRESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEIDE 60

Query: 61 AQEKSWRM---SSSSAADKTTASGKKNVRTDTVAVA 94
          AQEKSWR+   SSSS+ADKTT + KKNVRTDTVAVA
Sbjct: 61 AQEKSWRISSSSSSSSADKTTTTNKKNVRTDTVAVA 96

BLAST of CmoCh08G009870 vs. NCBI nr
Match: gi|351721079|ref|NP_001235150.1| (uncharacterized protein LOC100499981 [Glycine max])

HSP 1 Score: 122.9 bits (307), Expect = 3.0e-25
Identity = 60/96 (62.50%), Postives = 75/96 (78.12%), Query Frame = 1

Query: 2   RNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEA 61
           R+ M Y+ G +DH +E HFL+ACFLCR+PLG NRDIFMY+GNTPFCSKECRQEQIE+DEA
Sbjct: 20  RSRMFYYAGSEDHYEEPHFLQACFLCRKPLGQNRDIFMYRGNTPFCSKECRQEQIEIDEA 79

Query: 62  QEKSWRMSSSSAADKT----TASGKKNVRTDTVAVA 94
           +EKSW++SS     ++     ++  K VRT TVAVA
Sbjct: 80  KEKSWKLSSKRGVRQSETNQNSTPNKAVRTGTVAVA 115

BLAST of CmoCh08G009870 vs. NCBI nr
Match: gi|734371916|gb|KHN19719.1| (hypothetical protein glysoja_046293 [Glycine soja])

HSP 1 Score: 122.9 bits (307), Expect = 3.0e-25
Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1

Query: 2   RNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEA 61
           R+ M Y+ G +DH +E HFL+ACFLCR+PLG NRDIFMY+GNTPFCSKECRQEQIE+DE+
Sbjct: 20  RSSMFYYAGSEDHSEEPHFLQACFLCRKPLGQNRDIFMYRGNTPFCSKECRQEQIEIDES 79

Query: 62  QEKSWRMSSSSAADKT----TASGKKNVRTDTVAVA 94
           +EKSW++SS     ++     ++  K VRT TVAVA
Sbjct: 80  KEKSWKLSSKRGVRQSETNQNSTPNKAVRTGTVAVA 115

BLAST of CmoCh08G009870 vs. NCBI nr
Match: gi|1009159502|ref|XP_015897849.1| (PREDICTED: uncharacterized protein LOC107431453 [Ziziphus jujuba])

HSP 1 Score: 121.3 bits (303), Expect = 8.8e-25
Identity = 60/98 (61.22%), Postives = 75/98 (76.53%), Query Frame = 1

Query: 1  MRNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDE 60
          MR GM      +DH+ E+HFLEACFLCR+PLG+N DIFMY+GNTPFCSKECRQEQIE+DE
Sbjct: 1  MRTGMFRFAEDEDHQNETHFLEACFLCRKPLGYNTDIFMYRGNTPFCSKECRQEQIEIDE 60

Query: 61 AQEKSWRMSSSSAADKTTASGK-----KNVRTDTVAVA 94
          A+EKSW++SSS+ A + +   K     K V+T T+ VA
Sbjct: 61 AKEKSWKLSSSNRALRKSDPNKNSTPSKTVQTGTLVVA 98

BLAST of CmoCh08G009870 vs. NCBI nr
Match: gi|351726528|ref|NP_001235594.1| (uncharacterized protein LOC100306220 [Glycine max])

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-24
Identity = 58/96 (60.42%), Postives = 75/96 (78.12%), Query Frame = 1

Query: 2   RNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEA 61
           R+ M Y+ G +DH +E HFL+ACFLCR+PLG +RDIFMY+GNTPFCSKECRQEQIE+DE+
Sbjct: 20  RSSMFYYAGSEDHSEEPHFLQACFLCRKPLGQSRDIFMYRGNTPFCSKECRQEQIEIDES 79

Query: 62  QEKSWRMSSSSAADKT----TASGKKNVRTDTVAVA 94
           +EKSW++SS     ++     ++  K VRT TVAVA
Sbjct: 80  KEKSWKLSSKRGVRQSETNQNSTPNKAVRTGTVAVA 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LHK0_CUCSA8.8e-4086.46Uncharacterized protein OS=Cucumis sativus GN=Csa_2G118280 PE=4 SV=1[more]
A0A0B2QHL3_GLYSO2.1e-2561.46Uncharacterized protein OS=Glycine soja GN=glysoja_046293 PE=4 SV=1[more]
K7KE91_SOYBN2.1e-2561.46Uncharacterized protein OS=Glycine max GN=GLYMA_03G105400 PE=4 SV=1[more]
A0A0B2P1P9_GLYSO2.1e-2562.50Uncharacterized protein OS=Glycine soja GN=glysoja_034403 PE=4 SV=1[more]
C6SZ02_SOYBN2.1e-2562.50Uncharacterized protein OS=Glycine max GN=GLYMA_07G117300 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G47060.14.5e-1967.86 Protein of unknown function (DUF581)[more]
AT2G44670.16.5e-1854.22 Protein of unknown function (DUF581)[more]
AT4G17670.11.1e-1749.48 Protein of unknown function (DUF581)[more]
AT1G78020.19.1e-1250.79 Protein of unknown function (DUF581)[more]
AT5G49120.12.9e-1055.00 Protein of unknown function (DUF581)[more]
Match NameE-valueIdentityDescription
gi|700206286|gb|KGN61405.1|1.3e-3986.46hypothetical protein Csa_2G118280 [Cucumis sativus][more]
gi|351721079|ref|NP_001235150.1|3.0e-2562.50uncharacterized protein LOC100499981 [Glycine max][more]
gi|734371916|gb|KHN19719.1|3.0e-2561.46hypothetical protein glysoja_046293 [Glycine soja][more]
gi|1009159502|ref|XP_015897849.1|8.8e-2561.22PREDICTED: uncharacterized protein LOC107431453 [Ziziphus jujuba][more]
gi|351726528|ref|NP_001235594.1|1.1e-2460.42uncharacterized protein LOC100306220 [Glycine max][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007650Zf-FLZ_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G009870.1CmoCh08G009870.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007650Zf-FLZ domainPFAMPF04570zf-FLZcoord: 13..61
score: 3.7
NoneNo IPR availablePANTHERPTHR33059FAMILY NOT NAMEDcoord: 2..93
score: 5.6
NoneNo IPR availablePANTHERPTHR33059:SF32SUBFAMILY NOT NAMEDcoord: 2..93
score: 5.6

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh08G009870CmoCh17G000720Cucurbita moschata (Rifu)cmocmoB324