CmoCh08G009870 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCGCTAACTCTAGCCCTAATCTCTTGATTTCGAAGTGGAAATTTCTCTTCTTATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACAGGCAGGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAGTGAGTGATTGTGATTCGAATTCAATTCATTTCGTTCCGATTTCATTTTCTAGGTTTTTTTTTTTTTTTGTGGAAGAAATTTATGTGAGACGATACTGACGGAATCTGCTCCGAATCGTATTGATTTCAGAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTCTGCGGCGGATAAAACGACGGCGTCTGGTAAGAAAAACGTAAGGACGGATACAGTTGCAGTGGCGTGAGTTCCGATGAAGAAATTTTGAGAAAAAGAACGGAAAACAGAGAAAGAAAAGGAAATTCAGATTCAAATGCGAGAGGAAAAGATTTGTGTTCTTCGAACACAGAAACAAAAAAAAAGAGAGAAAGAAATGGAAATTCAGATTGAGATTTCTTCCTGTGGAGAAGAATCGATTGGCAGAGGCTATACAGAACTGTTCTGCTTCAATCTCTTCACTCAGCTTTTCAATTTTTTGTTTAAATTATAAATAAAAAAAGTTTGAATTTCATATAAATTGTTACATGAACTAGAATCCTAATTTTTTAATTTTAATTTTAATTTTTAGATGGATGTAATTTTCTTTTGTTATTTTAAAATACAGGGCACAG CTCTCGCTAACTCTAGCCCTAATCTCTTGATTTCGAAGTGGAAATTTCTCTTCTTATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACAGGCAGGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTCTGCGGCGGATAAAACGACGGCGTCTGGTAAGAAAAACGTAAGGACGGATACAGTTGCAGTGGCGTGAGTTCCGATGAAGAAATTTTGAGAAAAAGAACGGAAAACAGAGAAAGAAAAGGAAATTCAGATTCAAATGCGAGAGGAAAAGATTTGTGTTCTTCGAACACAGAAACAAAAAAAAAGAGAGAAAGAAATGGAAATTCAGATTGAGATTTCTTCCTGTGGAGAAGAATCGATTGGCAGAGGCTATACAGAACTGTTCTGCTTCAATCTCTTCACTCAGCTTTTCAATTTTTTGTTTAAATTATAAATAAAAAAAGTTTGAATTTCATATAAATTGTTACATGAACTAGAATCCTAATTTTTTAATTTTAATTTTAATTTTTAGATGGATGTAATTTTCTTTTGTTATTTTAAAATACAGGGCACAG ATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACAGGCAGGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTCTGCGGCGGATAAAACGACGGCGTCTGGTAAGAAAAACGTAAGGACGGATACAGTTGCAGTGGCGTGA
BLAST of CmoCh08G009870 vs. TrEMBL
Match: A0A0A0LHK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G118280 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 8.8e-40 Identity = 83/96 (86.46%), Postives = 89/96 (92.71%), Query Frame = 1
BLAST of CmoCh08G009870 vs. TrEMBL
Match: A0A0B2QHL3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046293 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.1e-25 Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1
BLAST of CmoCh08G009870 vs. TrEMBL
Match: K7KE91_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G105400 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.1e-25 Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1
BLAST of CmoCh08G009870 vs. TrEMBL
Match: A0A0B2P1P9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_034403 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.1e-25 Identity = 60/96 (62.50%), Postives = 75/96 (78.12%), Query Frame = 1
BLAST of CmoCh08G009870 vs. TrEMBL
Match: C6SZ02_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G117300 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.1e-25 Identity = 60/96 (62.50%), Postives = 75/96 (78.12%), Query Frame = 1
BLAST of CmoCh08G009870 vs. TAIR10
Match: AT5G47060.1 (AT5G47060.1 Protein of unknown function (DUF581)) HSP 1 Score: 90.9 bits (224), Expect = 4.5e-19 Identity = 38/56 (67.86%), Postives = 49/56 (87.50%), Query Frame = 1
BLAST of CmoCh08G009870 vs. TAIR10
Match: AT2G44670.1 (AT2G44670.1 Protein of unknown function (DUF581)) HSP 1 Score: 87.0 bits (214), Expect = 6.5e-18 Identity = 45/83 (54.22%), Postives = 59/83 (71.08%), Query Frame = 1
BLAST of CmoCh08G009870 vs. TAIR10
Match: AT4G17670.1 (AT4G17670.1 Protein of unknown function (DUF581)) HSP 1 Score: 86.3 bits (212), Expect = 1.1e-17 Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 1
BLAST of CmoCh08G009870 vs. TAIR10
Match: AT1G78020.1 (AT1G78020.1 Protein of unknown function (DUF581)) HSP 1 Score: 66.6 bits (161), Expect = 9.1e-12 Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 1
BLAST of CmoCh08G009870 vs. TAIR10
Match: AT5G49120.1 (AT5G49120.1 Protein of unknown function (DUF581)) HSP 1 Score: 61.6 bits (148), Expect = 2.9e-10 Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 1
BLAST of CmoCh08G009870 vs. NCBI nr
Match: gi|700206286|gb|KGN61405.1| (hypothetical protein Csa_2G118280 [Cucumis sativus]) HSP 1 Score: 170.6 bits (431), Expect = 1.3e-39 Identity = 83/96 (86.46%), Postives = 89/96 (92.71%), Query Frame = 1
BLAST of CmoCh08G009870 vs. NCBI nr
Match: gi|351721079|ref|NP_001235150.1| (uncharacterized protein LOC100499981 [Glycine max]) HSP 1 Score: 122.9 bits (307), Expect = 3.0e-25 Identity = 60/96 (62.50%), Postives = 75/96 (78.12%), Query Frame = 1
BLAST of CmoCh08G009870 vs. NCBI nr
Match: gi|734371916|gb|KHN19719.1| (hypothetical protein glysoja_046293 [Glycine soja]) HSP 1 Score: 122.9 bits (307), Expect = 3.0e-25 Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1
BLAST of CmoCh08G009870 vs. NCBI nr
Match: gi|1009159502|ref|XP_015897849.1| (PREDICTED: uncharacterized protein LOC107431453 [Ziziphus jujuba]) HSP 1 Score: 121.3 bits (303), Expect = 8.8e-25 Identity = 60/98 (61.22%), Postives = 75/98 (76.53%), Query Frame = 1
BLAST of CmoCh08G009870 vs. NCBI nr
Match: gi|351726528|ref|NP_001235594.1| (uncharacterized protein LOC100306220 [Glycine max]) HSP 1 Score: 120.9 bits (302), Expect = 1.1e-24 Identity = 58/96 (60.42%), Postives = 75/96 (78.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |