CmoCh08G009850 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTTAGAATCCATTGGAATTGGGTTGGCTTTTACAAGGTATGTGAAAAGTGTGTATTACAGGACGGAGAGTCCCCTTTCAAATGGGGAGGAGGCAAGAAGATGATTATATTCTGTCTTCATCTACCTCTTTGCCCCACCCCGTCCCAATATATACACACACATATGTATTTTGAAGACTTTCTTATAATATTGAAATTTGAATTTTTAAAAATTATATCCCTACAATTACGCTAATTTATCCTATTTCTAATTTTTTTTATTTTTTATAAAATAATTTGCGAATAAAATATCATTTTGGCCCCTAATTTCTAAATCTAATTTTATTTTAGAAATAATAATTTTTTTTAAAATTTTTAAAACTTGAATTCCTTCAAAGAAAATTTCTAAAATATTGGGCCGACATATTGGGCTGGGCTTTTAGAAAATAGTTGGGCCTATCATTTTTTGATCTATTACTAAATGGCCCATAATGCGCTATTTAATATCTTCGAAGATTACTTCAGTTCACTTCACCCGAAACAAAATAAAGCAGGGGAATCGAGAGTGACACAATCGAAAAAATGCCAACCGGCGGCGGGTTTGGCACGGCGGCGGCGTTCCCGTCGAGAACAATCGAAGAGCAGAAACTGGAAATTACAAAAGAGATGAGAAGTCATGAGGTTTCCATTGCAGAGCTCAATCATCTTTCCTCTACCAGAGTAAGCCCTACCGCCATGTTTCGCTAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAATTTGAACTAGAAGTAGAACTTTGTAATAGCATTATGTTTGAAAATTTGTTCGAACTCTGCGTATTTACCTTTTTCTGCTGGATATTTTGCTAATCGATCACCATGGCTAGCATTTTGGACTAAGTTTTCTATCGTATACGTTAAGATTTAGAGTTACATGTTAATCTAGGGTTTAAATCTTAGAAACTCGTCTTCGTTTGAATTCGTTTTAGGTATTTTTGAAACATGCAACGAAGTTATGGATGTTTTTATGTAAACAGCTTGATTTATGTATTTTTATTGTATAGAAGAATTTTAGTTTAGTAGTGACTTTTGATATCTCTTTTTTGCTTGAGCTCTAATAAGGATTACAACATCTCAATTTCATGAAAAATATATGTGAAAACATTCTTGTATGTTCTTACGAAGATCATGAAAAAAGAAAGTTGTAAACATCGATTGATTTCTAATACTGATATCATATTTTTCCATTTATGAAAATATTAGTGGAAATATTGATATGTGGATGAAGGACACTTGACATCGAATTGCTTAAGTTGAACAGCCACTGCCTCTCTCTGAGCAACCATTTTACTAATTCTTAATGTTATACATTGCAGGCTGTCTTTCAGAAGAATGGAAACATATTTTTCCGAACAACTGTTCAAAAAGCAACAACTTCCGAACAGAGTAAGAAAATTGCTTTAATAAGCCTCCACTCTCCAATGTTTTCCTGTCTTCCCTCTAATCCCATCTATGGTGATCAATACACTTCCACATTTTAGATATATCCATCAATATTTCTATCAAGAAAGTTCTAATATCCATATGAGGAAGAAAATTTCTTCTTTGAAACATATCGAAATGAGATTAGATATCGAAAAATGTTAGATATATGAGATCGATAGAATGTCAATAGCTAATTTCTTCTTTTTCTGTTTGACCTTGGTATCTCTCCTTCGACCCATGTGAAATTTAAGGCTTCACTATTTTTGTTTGTCAATATCTACAATTAACTAATTGACCCCATCTCATCATTCTGATTGGCTGTTCTTTTCTTTTCAGAAAAGCTTGATGCGGCTAGAGCAAAGCTTCAAAAACTGAATTATTGATACAAATGGAGTTCAAATTTACAAACCATTCAAATTTCTCGCATATTCAAAGGAAACTCTGGAGCCAACCCTTGATTTATAGGTTCAGAAGTCTTGCTTACAAAATTTATCTGCTAAAATATATTTCAACCCTGAAAAGCATGTTTTTTGTTCTGGACATCTTTGATTATTAGCATGAATCAATAAAATAGTGAAGACAATGATGCCTCAATGTAAGTTGAGCTGTTATGATGCAACTTTTCAAATGTTAGTCTAAACCCCAATGGAAAACCTTTCATGTTGCCCTGTGATTCGTTCACTAAGTCCTCTCTCAGACGTTTTCACTCGAGCTATGCTGGAGACGGAGAATGGGCGAAGATTTTGAACTTTGAGAAAGTTAAAGCATGGCGACTATTAACAGTAACAAGATAAAGTTAAAGTTCCAACTTTTGTACTATTTTTTACAAACTAGTGCCAGTAAATAGCATAGGAATCTGGAAATATGATGCAAT ATGTTCTTAGAATCCATTGGAATTGGGTTGGCTTTTACAAGGGGAATCGAGAGTGACACAATCGAAAAAATGCCAACCGGCGGCGGGTTTGGCACGGCGGCGGCGTTCCCGTCGAGAACAATCGAAGAGCAGAAACTGGAAATTACAAAAGAGATGAGAAGTCATGAGGTTTCCATTGCAGAGCTCAATCATCTTTCCTCTACCAGAGCTGTCTTTCAGAAGAATGGAAACATATTTTTCCGAACAACTGTTCAAAAAGCAACAACTTCCGAACAGAAAAAGCTTGATGCGGCTAGAGCAAAGCTTCAAAAACTGAATTATTGATACAAATGGAGTTCAAATTTACAAACCATTCAAATTTCTCGCATATTCAAAGGAAACTCTGGAGCCAACCCTTGATTTATAGGTTCAGAAGTCTTGCTTACAAAATTTATCTGCTAAAATATATTTCAACCCTGAAAAGCATGTTTTTTGTTCTGGACATCTTTGATTATTAGCATGAATCAATAAAATAGTGAAGACAATGATGCCTCAATGTAAGTTGAGCTGTTATGATGCAACTTTTCAAATGTTAGTCTAAACCCCAATGGAAAACCTTTCATGTTGCCCTGTGATTCGTTCACTAAGTCCTCTCTCAGACGTTTTCACTCGAGCTATGCTGGAGACGGAGAATGGGCGAAGATTTTGAACTTTGAGAAAGTTAAAGCATGGCGACTATTAACAGTAACAAGATAAAGTTAAAGTTCCAACTTTTGTACTATTTTTTACAAACTAGTGCCAGTAAATAGCATAGGAATCTGGAAATATGATGCAAT ATGTTCTTAGAATCCATTGGAATTGGGTTGGCTTTTACAAGGGGAATCGAGAGTGACACAATCGAAAAAATGCCAACCGGCGGCGGGTTTGGCACGGCGGCGGCGTTCCCGTCGAGAACAATCGAAGAGCAGAAACTGGAAATTACAAAAGAGATGAGAAGTCATGAGGTTTCCATTGCAGAGCTCAATCATCTTTCCTCTACCAGAGCTGTCTTTCAGAAGAATGGAAACATATTTTTCCGAACAACTGTTCAAAAAGCAACAACTTCCGAACAGAAAAAGCTTGATGCGGCTAGAGCAAAGCTTCAAAAACTGAATTATTGA
BLAST of CmoCh08G009850 vs. TrEMBL
Match: A0A0A0LK18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G118320 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.4e-25 Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 1
BLAST of CmoCh08G009850 vs. TrEMBL
Match: A0A061F0A6_THECC (Prefoldin chaperone subunit family protein OS=Theobroma cacao GN=TCM_025706 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 6.0e-16 Identity = 45/73 (61.64%), Postives = 63/73 (86.30%), Query Frame = 1
BLAST of CmoCh08G009850 vs. TrEMBL
Match: B9SDD3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1516690 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.9e-15 Identity = 42/64 (65.62%), Postives = 58/64 (90.62%), Query Frame = 1
BLAST of CmoCh08G009850 vs. TrEMBL
Match: A0A0V0GZI8_SOLCH (Putative prefoldin chaperone subunit family protein-like (Fragment) OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 7.3e-14 Identity = 41/64 (64.06%), Postives = 56/64 (87.50%), Query Frame = 1
BLAST of CmoCh08G009850 vs. TrEMBL
Match: A0A067DVG4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034910mg PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.6e-13 Identity = 44/69 (63.77%), Postives = 53/69 (76.81%), Query Frame = 1
BLAST of CmoCh08G009850 vs. TAIR10
Match: AT1G49245.1 (AT1G49245.1 Prefoldin chaperone subunit family protein) HSP 1 Score: 64.7 bits (156), Expect = 4.0e-11 Identity = 30/66 (45.45%), Postives = 51/66 (77.27%), Query Frame = 1
BLAST of CmoCh08G009850 vs. NCBI nr
Match: gi|659114680|ref|XP_008457178.1| (PREDICTED: uncharacterized protein LOC103496917 [Cucumis melo]) HSP 1 Score: 124.0 bits (310), Expect = 1.6e-25 Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 1
BLAST of CmoCh08G009850 vs. NCBI nr
Match: gi|778668237|ref|XP_011649062.1| (PREDICTED: uncharacterized protein LOC105434577 [Cucumis sativus]) HSP 1 Score: 123.6 bits (309), Expect = 2.0e-25 Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 1
BLAST of CmoCh08G009850 vs. NCBI nr
Match: gi|590639995|ref|XP_007029831.1| (Prefoldin chaperone subunit family protein [Theobroma cacao]) HSP 1 Score: 91.7 bits (226), Expect = 8.6e-16 Identity = 45/73 (61.64%), Postives = 63/73 (86.30%), Query Frame = 1
BLAST of CmoCh08G009850 vs. NCBI nr
Match: gi|802585205|ref|XP_012070300.1| (PREDICTED: uncharacterized protein LOC105632515 [Jatropha curcas]) HSP 1 Score: 90.1 bits (222), Expect = 2.5e-15 Identity = 43/64 (67.19%), Postives = 57/64 (89.06%), Query Frame = 1
BLAST of CmoCh08G009850 vs. NCBI nr
Match: gi|255566028|ref|XP_002524002.1| (PREDICTED: uncharacterized protein LOC8284260 [Ricinus communis]) HSP 1 Score: 89.0 bits (219), Expect = 5.6e-15 Identity = 42/64 (65.62%), Postives = 58/64 (90.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |