CmoCh08G009850 (gene) Cucurbita moschata (Rifu)

NameCmoCh08G009850
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPrefoldin chaperone subunit family protein
LocationCmo_Chr08 : 6411651 .. 6413998 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTAGAATCCATTGGAATTGGGTTGGCTTTTACAAGGTATGTGAAAAGTGTGTATTACAGGACGGAGAGTCCCCTTTCAAATGGGGAGGAGGCAAGAAGATGATTATATTCTGTCTTCATCTACCTCTTTGCCCCACCCCGTCCCAATATATACACACACATATGTATTTTGAAGACTTTCTTATAATATTGAAATTTGAATTTTTAAAAATTATATCCCTACAATTACGCTAATTTATCCTATTTCTAATTTTTTTTATTTTTTATAAAATAATTTGCGAATAAAATATCATTTTGGCCCCTAATTTCTAAATCTAATTTTATTTTAGAAATAATAATTTTTTTTAAAATTTTTAAAACTTGAATTCCTTCAAAGAAAATTTCTAAAATATTGGGCCGACATATTGGGCTGGGCTTTTAGAAAATAGTTGGGCCTATCATTTTTTGATCTATTACTAAATGGCCCATAATGCGCTATTTAATATCTTCGAAGATTACTTCAGTTCACTTCACCCGAAACAAAATAAAGCAGGGGAATCGAGAGTGACACAATCGAAAAAATGCCAACCGGCGGCGGGTTTGGCACGGCGGCGGCGTTCCCGTCGAGAACAATCGAAGAGCAGAAACTGGAAATTACAAAAGAGATGAGAAGTCATGAGGTTTCCATTGCAGAGCTCAATCATCTTTCCTCTACCAGAGTAAGCCCTACCGCCATGTTTCGCTAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAATTTGAACTAGAAGTAGAACTTTGTAATAGCATTATGTTTGAAAATTTGTTCGAACTCTGCGTATTTACCTTTTTCTGCTGGATATTTTGCTAATCGATCACCATGGCTAGCATTTTGGACTAAGTTTTCTATCGTATACGTTAAGATTTAGAGTTACATGTTAATCTAGGGTTTAAATCTTAGAAACTCGTCTTCGTTTGAATTCGTTTTAGGTATTTTTGAAACATGCAACGAAGTTATGGATGTTTTTATGTAAACAGCTTGATTTATGTATTTTTATTGTATAGAAGAATTTTAGTTTAGTAGTGACTTTTGATATCTCTTTTTTGCTTGAGCTCTAATAAGGATTACAACATCTCAATTTCATGAAAAATATATGTGAAAACATTCTTGTATGTTCTTACGAAGATCATGAAAAAAGAAAGTTGTAAACATCGATTGATTTCTAATACTGATATCATATTTTTCCATTTATGAAAATATTAGTGGAAATATTGATATGTGGATGAAGGACACTTGACATCGAATTGCTTAAGTTGAACAGCCACTGCCTCTCTCTGAGCAACCATTTTACTAATTCTTAATGTTATACATTGCAGGCTGTCTTTCAGAAGAATGGAAACATATTTTTCCGAACAACTGTTCAAAAAGCAACAACTTCCGAACAGAGTAAGAAAATTGCTTTAATAAGCCTCCACTCTCCAATGTTTTCCTGTCTTCCCTCTAATCCCATCTATGGTGATCAATACACTTCCACATTTTAGATATATCCATCAATATTTCTATCAAGAAAGTTCTAATATCCATATGAGGAAGAAAATTTCTTCTTTGAAACATATCGAAATGAGATTAGATATCGAAAAATGTTAGATATATGAGATCGATAGAATGTCAATAGCTAATTTCTTCTTTTTCTGTTTGACCTTGGTATCTCTCCTTCGACCCATGTGAAATTTAAGGCTTCACTATTTTTGTTTGTCAATATCTACAATTAACTAATTGACCCCATCTCATCATTCTGATTGGCTGTTCTTTTCTTTTCAGAAAAGCTTGATGCGGCTAGAGCAAAGCTTCAAAAACTGAATTATTGATACAAATGGAGTTCAAATTTACAAACCATTCAAATTTCTCGCATATTCAAAGGAAACTCTGGAGCCAACCCTTGATTTATAGGTTCAGAAGTCTTGCTTACAAAATTTATCTGCTAAAATATATTTCAACCCTGAAAAGCATGTTTTTTGTTCTGGACATCTTTGATTATTAGCATGAATCAATAAAATAGTGAAGACAATGATGCCTCAATGTAAGTTGAGCTGTTATGATGCAACTTTTCAAATGTTAGTCTAAACCCCAATGGAAAACCTTTCATGTTGCCCTGTGATTCGTTCACTAAGTCCTCTCTCAGACGTTTTCACTCGAGCTATGCTGGAGACGGAGAATGGGCGAAGATTTTGAACTTTGAGAAAGTTAAAGCATGGCGACTATTAACAGTAACAAGATAAAGTTAAAGTTCCAACTTTTGTACTATTTTTTACAAACTAGTGCCAGTAAATAGCATAGGAATCTGGAAATATGATGCAAT

mRNA sequence

ATGTTCTTAGAATCCATTGGAATTGGGTTGGCTTTTACAAGGGGAATCGAGAGTGACACAATCGAAAAAATGCCAACCGGCGGCGGGTTTGGCACGGCGGCGGCGTTCCCGTCGAGAACAATCGAAGAGCAGAAACTGGAAATTACAAAAGAGATGAGAAGTCATGAGGTTTCCATTGCAGAGCTCAATCATCTTTCCTCTACCAGAGCTGTCTTTCAGAAGAATGGAAACATATTTTTCCGAACAACTGTTCAAAAAGCAACAACTTCCGAACAGAAAAAGCTTGATGCGGCTAGAGCAAAGCTTCAAAAACTGAATTATTGATACAAATGGAGTTCAAATTTACAAACCATTCAAATTTCTCGCATATTCAAAGGAAACTCTGGAGCCAACCCTTGATTTATAGGTTCAGAAGTCTTGCTTACAAAATTTATCTGCTAAAATATATTTCAACCCTGAAAAGCATGTTTTTTGTTCTGGACATCTTTGATTATTAGCATGAATCAATAAAATAGTGAAGACAATGATGCCTCAATGTAAGTTGAGCTGTTATGATGCAACTTTTCAAATGTTAGTCTAAACCCCAATGGAAAACCTTTCATGTTGCCCTGTGATTCGTTCACTAAGTCCTCTCTCAGACGTTTTCACTCGAGCTATGCTGGAGACGGAGAATGGGCGAAGATTTTGAACTTTGAGAAAGTTAAAGCATGGCGACTATTAACAGTAACAAGATAAAGTTAAAGTTCCAACTTTTGTACTATTTTTTACAAACTAGTGCCAGTAAATAGCATAGGAATCTGGAAATATGATGCAAT

Coding sequence (CDS)

ATGTTCTTAGAATCCATTGGAATTGGGTTGGCTTTTACAAGGGGAATCGAGAGTGACACAATCGAAAAAATGCCAACCGGCGGCGGGTTTGGCACGGCGGCGGCGTTCCCGTCGAGAACAATCGAAGAGCAGAAACTGGAAATTACAAAAGAGATGAGAAGTCATGAGGTTTCCATTGCAGAGCTCAATCATCTTTCCTCTACCAGAGCTGTCTTTCAGAAGAATGGAAACATATTTTTCCGAACAACTGTTCAAAAAGCAACAACTTCCGAACAGAAAAAGCTTGATGCGGCTAGAGCAAAGCTTCAAAAACTGAATTATTGA
BLAST of CmoCh08G009850 vs. TrEMBL
Match: A0A0A0LK18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G118320 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-25
Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 1

Query: 24  MPTGGGFGTAAAFPSRTIEEQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTT 83
           M   GG  TAA+ PS T+EEQKLEITK+MRS EV+IAELNHLSSTRAVFQKNGN+FFRTT
Sbjct: 1   MAADGGLSTAAS-PSITMEEQKLEITKQMRSLEVAIAELNHLSSTRAVFQKNGNLFFRTT 60

Query: 84  VQKATTSEQKKLDAARAKLQKLN 107
           VQKATTSEQKKLDAARAKL+ LN
Sbjct: 61  VQKATTSEQKKLDAARAKLESLN 82

BLAST of CmoCh08G009850 vs. TrEMBL
Match: A0A061F0A6_THECC (Prefoldin chaperone subunit family protein OS=Theobroma cacao GN=TCM_025706 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.0e-16
Identity = 45/73 (61.64%), Postives = 63/73 (86.30%), Query Frame = 1

Query: 34  AAFPSRTIEEQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTTVQKATTSEQK 93
           A   S T  + KL++TK++R+HEV+IAEL+ L S++ V+QKNGN+FFRTT+QKAT+SEQK
Sbjct: 2   ATASSSTSTDPKLDLTKQIRTHEVAIAELSSLYSSQTVYQKNGNLFFRTTIQKATSSEQK 61

Query: 94  KLDAARAKLQKLN 107
           +LD+A+AKL+KLN
Sbjct: 62  QLDSAKAKLEKLN 74

BLAST of CmoCh08G009850 vs. TrEMBL
Match: B9SDD3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1516690 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.9e-15
Identity = 42/64 (65.62%), Postives = 58/64 (90.62%), Query Frame = 1

Query: 43  EQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTTVQKATTSEQKKLDAARAKL 102
           + KL++ +++RSHEV++AELN+LSS+R V+QKNGN+FFRTT+QKAT SEQK+LD+A+A L
Sbjct: 16  DPKLDLVRKVRSHEVALAELNNLSSSRGVYQKNGNLFFRTTIQKATASEQKQLDSAKANL 75

Query: 103 QKLN 107
            KLN
Sbjct: 76  GKLN 79

BLAST of CmoCh08G009850 vs. TrEMBL
Match: A0A0V0GZI8_SOLCH (Putative prefoldin chaperone subunit family protein-like (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 7.3e-14
Identity = 41/64 (64.06%), Postives = 56/64 (87.50%), Query Frame = 1

Query: 43  EQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTTVQKATTSEQKKLDAARAKL 102
           E  L + KE+RSHEV+IAEL++L  +RAV+++NGN+FFRTTVQKATTSEQK++D  ++KL
Sbjct: 12  ESHLHLVKEVRSHEVAIAELSNLPDSRAVYRRNGNLFFRTTVQKATTSEQKQVDMVKSKL 71

Query: 103 QKLN 107
           QKL+
Sbjct: 72  QKLS 75

BLAST of CmoCh08G009850 vs. TrEMBL
Match: A0A067DVG4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034910mg PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-13
Identity = 44/69 (63.77%), Postives = 53/69 (76.81%), Query Frame = 1

Query: 38  SRTIEEQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTTVQKATTSEQKKLDA 97
           S    + K  + KE++SHEV+IAELN LSS+RAV+QKNGNIFFRTT QKAT SEQK LD 
Sbjct: 9   SSIASDLKAHLIKEVKSHEVAIAELNSLSSSRAVYQKNGNIFFRTTNQKATASEQKHLDV 68

Query: 98  ARAKLQKLN 107
            + KL+ LN
Sbjct: 69  TKRKLEMLN 77

BLAST of CmoCh08G009850 vs. TAIR10
Match: AT1G49245.1 (AT1G49245.1 Prefoldin chaperone subunit family protein)

HSP 1 Score: 64.7 bits (156), Expect = 4.0e-11
Identity = 30/66 (45.45%), Postives = 51/66 (77.27%), Query Frame = 1

Query: 40  TIEEQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTTVQKATTSEQKKLDAAR 99
           T  +++ E+ KE++  EVS+ EL+ LSS+R+++QKNGN+FF T+ +KA  S QK+LD A+
Sbjct: 5   TSSDREFELEKEIKRQEVSLDELSSLSSSRSIYQKNGNLFFLTSAEKAKISAQKQLDYAK 64

Query: 100 AKLQKL 106
           +++ K+
Sbjct: 65  SEINKI 70

BLAST of CmoCh08G009850 vs. NCBI nr
Match: gi|659114680|ref|XP_008457178.1| (PREDICTED: uncharacterized protein LOC103496917 [Cucumis melo])

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-25
Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 1

Query: 24  MPTGGGFGTAAAFPSRTIEEQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTT 83
           M   GGF TAA FPS T EEQKLEITK+MRS EV+IAELNHLSSTRAV+QKNGN+FFRTT
Sbjct: 1   MAADGGFSTAA-FPSITKEEQKLEITKQMRSLEVAIAELNHLSSTRAVYQKNGNLFFRTT 60

Query: 84  VQKATTSEQKKLDAARAKLQKLN 107
           VQKATTSEQKKLDAA+A+L++LN
Sbjct: 61  VQKATTSEQKKLDAAKARLERLN 82

BLAST of CmoCh08G009850 vs. NCBI nr
Match: gi|778668237|ref|XP_011649062.1| (PREDICTED: uncharacterized protein LOC105434577 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-25
Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 1

Query: 24  MPTGGGFGTAAAFPSRTIEEQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTT 83
           M   GG  TAA+ PS T+EEQKLEITK+MRS EV+IAELNHLSSTRAVFQKNGN+FFRTT
Sbjct: 1   MAADGGLSTAAS-PSITMEEQKLEITKQMRSLEVAIAELNHLSSTRAVFQKNGNLFFRTT 60

Query: 84  VQKATTSEQKKLDAARAKLQKLN 107
           VQKATTSEQKKLDAARAKL+ LN
Sbjct: 61  VQKATTSEQKKLDAARAKLESLN 82

BLAST of CmoCh08G009850 vs. NCBI nr
Match: gi|590639995|ref|XP_007029831.1| (Prefoldin chaperone subunit family protein [Theobroma cacao])

HSP 1 Score: 91.7 bits (226), Expect = 8.6e-16
Identity = 45/73 (61.64%), Postives = 63/73 (86.30%), Query Frame = 1

Query: 34  AAFPSRTIEEQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTTVQKATTSEQK 93
           A   S T  + KL++TK++R+HEV+IAEL+ L S++ V+QKNGN+FFRTT+QKAT+SEQK
Sbjct: 2   ATASSSTSTDPKLDLTKQIRTHEVAIAELSSLYSSQTVYQKNGNLFFRTTIQKATSSEQK 61

Query: 94  KLDAARAKLQKLN 107
           +LD+A+AKL+KLN
Sbjct: 62  QLDSAKAKLEKLN 74

BLAST of CmoCh08G009850 vs. NCBI nr
Match: gi|802585205|ref|XP_012070300.1| (PREDICTED: uncharacterized protein LOC105632515 [Jatropha curcas])

HSP 1 Score: 90.1 bits (222), Expect = 2.5e-15
Identity = 43/64 (67.19%), Postives = 57/64 (89.06%), Query Frame = 1

Query: 43  EQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTTVQKATTSEQKKLDAARAKL 102
           + KLE+ K MRSHE+++AEL++LSS+R V+QKNGNIFFRTT+QKA  SEQK+LD+ +AKL
Sbjct: 12  DSKLELVKRMRSHEIALAELDNLSSSRPVYQKNGNIFFRTTIQKAKASEQKQLDSIKAKL 71

Query: 103 QKLN 107
           +KLN
Sbjct: 72  EKLN 75

BLAST of CmoCh08G009850 vs. NCBI nr
Match: gi|255566028|ref|XP_002524002.1| (PREDICTED: uncharacterized protein LOC8284260 [Ricinus communis])

HSP 1 Score: 89.0 bits (219), Expect = 5.6e-15
Identity = 42/64 (65.62%), Postives = 58/64 (90.62%), Query Frame = 1

Query: 43  EQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTTVQKATTSEQKKLDAARAKL 102
           + KL++ +++RSHEV++AELN+LSS+R V+QKNGN+FFRTT+QKAT SEQK+LD+A+A L
Sbjct: 16  DPKLDLVRKVRSHEVALAELNNLSSSRGVYQKNGNLFFRTTIQKATASEQKQLDSAKANL 75

Query: 103 QKLN 107
            KLN
Sbjct: 76  GKLN 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LK18_CUCSA1.4e-2581.93Uncharacterized protein OS=Cucumis sativus GN=Csa_2G118320 PE=4 SV=1[more]
A0A061F0A6_THECC6.0e-1661.64Prefoldin chaperone subunit family protein OS=Theobroma cacao GN=TCM_025706 PE=4... [more]
B9SDD3_RICCO3.9e-1565.63Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1516690 PE=4 SV=1[more]
A0A0V0GZI8_SOLCH7.3e-1464.06Putative prefoldin chaperone subunit family protein-like (Fragment) OS=Solanum c... [more]
A0A067DVG4_CITSI1.6e-1363.77Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034910mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G49245.14.0e-1145.45 Prefoldin chaperone subunit family protein[more]
Match NameE-valueIdentityDescription
gi|659114680|ref|XP_008457178.1|1.6e-2580.72PREDICTED: uncharacterized protein LOC103496917 [Cucumis melo][more]
gi|778668237|ref|XP_011649062.1|2.0e-2581.93PREDICTED: uncharacterized protein LOC105434577 [Cucumis sativus][more]
gi|590639995|ref|XP_007029831.1|8.6e-1661.64Prefoldin chaperone subunit family protein [Theobroma cacao][more]
gi|802585205|ref|XP_012070300.1|2.5e-1567.19PREDICTED: uncharacterized protein LOC105632515 [Jatropha curcas][more]
gi|255566028|ref|XP_002524002.1|5.6e-1565.63PREDICTED: uncharacterized protein LOC8284260 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002777PFD_beta-like
IPR009053Prefoldin
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
cellular_component GO:0016272 prefoldin complex
molecular_function GO:0051082 unfolded protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G009850.1CmoCh08G009850.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 40..105
score: 5.
IPR009053PrefoldinGENE3DG3DSA:1.10.287.370coord: 40..106
score: 1.
IPR009053PrefoldinunknownSSF46579Prefoldincoord: 40..106
score: 1.4

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G009850Wax gourdcmowgoB1084
CmoCh08G009850Cucurbita moschata (Rifu)cmocmoB233
CmoCh08G009850Cucurbita moschata (Rifu)cmocmoB310
CmoCh08G009850Cucurbita moschata (Rifu)cmocmoB324
CmoCh08G009850Cucurbita moschata (Rifu)cmocmoB484
CmoCh08G009850Cucumber (Gy14) v1cgycmoB0568
CmoCh08G009850Cucumber (Gy14) v1cgycmoB0721
CmoCh08G009850Cucurbita maxima (Rimu)cmacmoB279
CmoCh08G009850Cucurbita maxima (Rimu)cmacmoB365
CmoCh08G009850Cucurbita maxima (Rimu)cmacmoB379
CmoCh08G009850Cucurbita maxima (Rimu)cmacmoB837
CmoCh08G009850Wild cucumber (PI 183967)cmocpiB882
CmoCh08G009850Wild cucumber (PI 183967)cmocpiB883
CmoCh08G009850Cucumber (Chinese Long) v2cmocuB871
CmoCh08G009850Cucumber (Chinese Long) v2cmocuB872
CmoCh08G009850Melon (DHL92) v3.5.1cmomeB832
CmoCh08G009850Melon (DHL92) v3.5.1cmomeB828
CmoCh08G009850Watermelon (Charleston Gray)cmowcgB792
CmoCh08G009850Watermelon (Charleston Gray)cmowcgB799
CmoCh08G009850Watermelon (97103) v1cmowmB856
CmoCh08G009850Watermelon (97103) v1cmowmB863
CmoCh08G009850Cucurbita pepo (Zucchini)cmocpeB833
CmoCh08G009850Cucurbita pepo (Zucchini)cmocpeB843
CmoCh08G009850Cucurbita pepo (Zucchini)cmocpeB853
CmoCh08G009850Bottle gourd (USVL1VR-Ls)cmolsiB797
CmoCh08G009850Bottle gourd (USVL1VR-Ls)cmolsiB805
CmoCh08G009850Bottle gourd (USVL1VR-Ls)cmolsiB823
CmoCh08G009850Cucumber (Gy14) v2cgybcmoB257
CmoCh08G009850Melon (DHL92) v3.6.1cmomedB935
CmoCh08G009850Melon (DHL92) v3.6.1cmomedB940
CmoCh08G009850Silver-seed gourdcarcmoB0323
CmoCh08G009850Silver-seed gourdcarcmoB0326
CmoCh08G009850Silver-seed gourdcarcmoB1289
CmoCh08G009850Silver-seed gourdcarcmoB1452
CmoCh08G009850Cucumber (Chinese Long) v3cmocucB1031
CmoCh08G009850Cucumber (Chinese Long) v3cmocucB1032
CmoCh08G009850Watermelon (97103) v2cmowmbB896
CmoCh08G009850Watermelon (97103) v2cmowmbB886