CmoCh08G005380 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G005380
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionHistone superfamily protein
LocationCmo_Chr08 : 3328845 .. 3329255 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGCACCAAGCAAACCGCCAGAAAATCCACCGGAGGCAAGGCTCCAAGGAAGCAATTGGCCACTAAGGCTGCTCGGAAGTCAGCCCCAGCCACCGGTGGAGTGAAGAAACCTCACCGCTTCCGTCCTGGAACCGTCGCACTTCGTGAGATCCGTAAGTACCAAAAGAGCACAGAGCTTTTGATCCGCAAGCTTCCGTTTCAACGATTGGTTCGTGAGATCGCTCAGGATTTCAAAACCGATCTGAGATTCCAGAGCAGTGCCGTAGCGGCGTTGCAGGAAGCAGCAGAGGCCTACTTGGTAGGTCTGTTTGAAGATACGAATCTGTGCGCGATTCATGCCAAGAGAGTCACGATTATGCCAAAGGATATTCAATTGGCAAGGAGGATTAGAGGGGAAAGAGCTTAA

mRNA sequence

ATGGCTCGCACCAAGCAAACCGCCAGAAAATCCACCGGAGGCAAGGCTCCAAGGAAGCAATTGGCCACTAAGGCTGCTCGGAAGTCAGCCCCAGCCACCGGTGGAGTGAAGAAACCTCACCGCTTCCGTCCTGGAACCGTCGCACTTCGTGAGATCCGTAAGTACCAAAAGAGCACAGAGCTTTTGATCCGCAAGCTTCCGTTTCAACGATTGGTTCGTGAGATCGCTCAGGATTTCAAAACCGATCTGAGATTCCAGAGCAGTGCCGTAGCGGCGTTGCAGGAAGCAGCAGAGGCCTACTTGGTAGGTCTGTTTGAAGATACGAATCTGTGCGCGATTCATGCCAAGAGAGTCACGATTATGCCAAAGGATATTCAATTGGCAAGGAGGATTAGAGGGGAAAGAGCTTAA

Coding sequence (CDS)

ATGGCTCGCACCAAGCAAACCGCCAGAAAATCCACCGGAGGCAAGGCTCCAAGGAAGCAATTGGCCACTAAGGCTGCTCGGAAGTCAGCCCCAGCCACCGGTGGAGTGAAGAAACCTCACCGCTTCCGTCCTGGAACCGTCGCACTTCGTGAGATCCGTAAGTACCAAAAGAGCACAGAGCTTTTGATCCGCAAGCTTCCGTTTCAACGATTGGTTCGTGAGATCGCTCAGGATTTCAAAACCGATCTGAGATTCCAGAGCAGTGCCGTAGCGGCGTTGCAGGAAGCAGCAGAGGCCTACTTGGTAGGTCTGTTTGAAGATACGAATCTGTGCGCGATTCATGCCAAGAGAGTCACGATTATGCCAAAGGATATTCAATTGGCAAGGAGGATTAGAGGGGAAAGAGCTTAA
Homology
[Close]
BLAST of CmoCh08G005380 vs. Swiss-Prot
Match: H32_ARATH (Histone H3.2 OS=Arabidopsis thaliana GN=HTR2 PE=1 SV=2)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. Swiss-Prot
Match: H32_ASPOF (Histone H3.2 OS=Asparagus officinalis PE=2 SV=3)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. Swiss-Prot
Match: H32_BRANA (Histone H3.2 OS=Brassica napus PE=2 SV=3)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. Swiss-Prot
Match: H32_EUPES (Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. Swiss-Prot
Match: H32_PETCR (Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-66
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. TrEMBL
Match: Q71CZ4_OROCE (Histone H3 OS=Orobanche cernua var. cumana PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. TrEMBL
Match: K3YE80_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_012541mg PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 52  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 111

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 112 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 171

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 172 MPKDIQLARRIRGERA 187

[Close]
BLAST of CmoCh08G005380 vs. TrEMBL
Match: A0A096TZU4_MAIZE (Histone H3.2 OS=Zea mays GN=H3C4 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 110 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 169

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 170 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 229

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 230 MPKDIQLARRIRGERA 245

[Close]
BLAST of CmoCh08G005380 vs. TrEMBL
Match: K3ZAN5_SETIT (Histone H3 OS=Setaria italica GN=SETIT_007481mg PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. TrEMBL
Match: M5WKJ0_PRUPE (Histone H3 OS=Prunus persica GN=PRUPE_ppa013165mg PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. TAIR10
Match: AT1G09200.1 (AT1G09200.1 Histone superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 7.7e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. TAIR10
Match: AT3G27360.1 (AT3G27360.1 Histone superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 7.7e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. TAIR10
Match: AT5G10390.1 (AT5G10390.1 Histone superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 7.7e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. TAIR10
Match: AT5G10400.1 (AT5G10400.1 Histone superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 7.7e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. TAIR10
Match: AT5G65360.1 (AT5G65360.1 Histone superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 7.7e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]
BLAST of CmoCh08G005380 vs. NCBI nr
Match: gi|992271660|gb|KXG31833.1| (hypothetical protein SORBI_003G065000, partial [Sorghum bicolor])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 87  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 146

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 147 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 206

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 207 MPKDIQLARRIRGERA 222

[Close]
BLAST of CmoCh08G005380 vs. NCBI nr
Match: gi|629084870|gb|KCW51227.1| (hypothetical protein EUGRSUZ_J00806, partial [Eucalyptus grandis])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 26  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 85

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 86  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 145

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 146 MPKDIQLARRIRGERA 161

[Close]
BLAST of CmoCh08G005380 vs. NCBI nr
Match: gi|414878180|tpg|DAA55311.1| (TPA: histone H3.2 [Zea mays])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 110 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 169

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 170 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 229

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 230 MPKDIQLARRIRGERA 245

[Close]
BLAST of CmoCh08G005380 vs. NCBI nr
Match: gi|944232983|gb|KQK97345.1| (hypothetical protein SETIT_012204mg, partial [Setaria italica])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 182

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 183 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 242

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 243 MPKDIQLARRIRGERA 258

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BLAST of CmoCh08G005380 vs. NCBI nr
Match: gi|922560415|ref|XP_013608483.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC106315288 [Brassica oleracea var. oleracea])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 121 MPKDIQLARRIRGERA 137
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

The following BLAST results are available for this feature:
BLAST of CmoCh08G005380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
H32_ARATH1.4e-66100.00Histone H3.2 OS=Arabidopsis thaliana GN=HTR2 PE=1 SV=2[more]
H32_ASPOF1.4e-66100.00Histone H3.2 OS=Asparagus officinalis PE=2 SV=3[more]
H32_BRANA1.4e-66100.00Histone H3.2 OS=Brassica napus PE=2 SV=3[more]
H32_EUPES1.4e-66100.00Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3[more]
H32_PETCR1.4e-66100.00Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2[more]
BLAST of CmoCh08G005380 vs. TrEMBL
Match NameE-valueIdentityDescription
Q71CZ4_OROCE1.5e-64100.00Histone H3 OS=Orobanche cernua var. cumana PE=2 SV=1[more]
K3YE80_SETIT1.5e-64100.00Uncharacterized protein OS=Setaria italica GN=SETIT_012541mg PE=3 SV=1[more]
A0A096TZU4_MAIZE1.5e-64100.00Histone H3.2 OS=Zea mays GN=H3C4 PE=3 SV=1[more]
K3ZAN5_SETIT1.5e-64100.00Histone H3 OS=Setaria italica GN=SETIT_007481mg PE=3 SV=1[more]
M5WKJ0_PRUPE1.5e-64100.00Histone H3 OS=Prunus persica GN=PRUPE_ppa013165mg PE=3 SV=1[more]
BLAST of CmoCh08G005380 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09200.17.7e-68100.00 Histone superfamily protein[more]
AT3G27360.17.7e-68100.00 Histone superfamily protein[more]
AT5G10390.17.7e-68100.00 Histone superfamily protein[more]
AT5G10400.17.7e-68100.00 Histone superfamily protein[more]
AT5G65360.17.7e-68100.00 Histone superfamily protein[more]
BLAST of CmoCh08G005380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|992271660|gb|KXG31833.1|2.2e-64100.00hypothetical protein SORBI_003G065000, partial [Sorghum bicolor][more]
gi|629084870|gb|KCW51227.1|2.2e-64100.00hypothetical protein EUGRSUZ_J00806, partial [Eucalyptus grandis][more]
gi|414878180|tpg|DAA55311.1|2.2e-64100.00TPA: histone H3.2 [Zea mays][more]
gi|944232983|gb|KQK97345.1|2.2e-64100.00hypothetical protein SETIT_012204mg, partial [Setaria italica][more]
gi|922560415|ref|XP_013608483.1|2.2e-64100.00PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC106315288 [Brassica o... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008283 cell proliferation
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0009536 plastid
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G005380.1CmoCh08G005380.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh08G005380Carg02732Silver-seed gourdcarcmoB1243
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G005380Cucurbita moschata (Rifu)cmocmoB078
CmoCh08G005380Cucurbita moschata (Rifu)cmocmoB229
CmoCh08G005380Cucurbita moschata (Rifu)cmocmoB319
CmoCh08G005380Cucurbita moschata (Rifu)cmocmoB378
CmoCh08G005380Cucurbita moschata (Rifu)cmocmoB447
CmoCh08G005380Cucumber (Gy14) v1cgycmoB0047
CmoCh08G005380Cucurbita maxima (Rimu)cmacmoB276
CmoCh08G005380Cucurbita maxima (Rimu)cmacmoB374
CmoCh08G005380Cucurbita maxima (Rimu)cmacmoB490
CmoCh08G005380Cucurbita maxima (Rimu)cmacmoB572
CmoCh08G005380Cucurbita maxima (Rimu)cmacmoB913
CmoCh08G005380Wild cucumber (PI 183967)cmocpiB884
CmoCh08G005380Wild cucumber (PI 183967)cmocpiB913
CmoCh08G005380Cucumber (Chinese Long) v2cmocuB873
CmoCh08G005380Cucumber (Chinese Long) v2cmocuB900
CmoCh08G005380Melon (DHL92) v3.5.1cmomeB808
CmoCh08G005380Melon (DHL92) v3.5.1cmomeB824
CmoCh08G005380Watermelon (Charleston Gray)cmowcgB790
CmoCh08G005380Watermelon (97103) v1cmowmB849
CmoCh08G005380Watermelon (97103) v1cmowmB861
CmoCh08G005380Cucurbita pepo (Zucchini)cmocpeB839
CmoCh08G005380Cucurbita pepo (Zucchini)cmocpeB850
CmoCh08G005380Cucurbita pepo (Zucchini)cmocpeB853
CmoCh08G005380Cucurbita pepo (Zucchini)cmocpeB861
CmoCh08G005380Bottle gourd (USVL1VR-Ls)cmolsiB809
CmoCh08G005380Bottle gourd (USVL1VR-Ls)cmolsiB817
CmoCh08G005380Cucumber (Gy14) v2cgybcmoB135
CmoCh08G005380Cucumber (Gy14) v2cgybcmoB422
CmoCh08G005380Cucumber (Gy14) v2cgybcmoB955
CmoCh08G005380Melon (DHL92) v3.6.1cmomedB911
CmoCh08G005380Melon (DHL92) v3.6.1cmomedB932
CmoCh08G005380Melon (DHL92) v3.6.1cmomedB939
CmoCh08G005380Silver-seed gourdcarcmoB0482
CmoCh08G005380Silver-seed gourdcarcmoB0610
CmoCh08G005380Silver-seed gourdcarcmoB0711
CmoCh08G005380Silver-seed gourdcarcmoB1034
CmoCh08G005380Cucumber (Chinese Long) v3cmocucB1025
CmoCh08G005380Cucumber (Chinese Long) v3cmocucB1034
CmoCh08G005380Cucumber (Chinese Long) v3cmocucB1045
CmoCh08G005380Cucumber (Chinese Long) v3cmocucB1066
CmoCh08G005380Watermelon (97103) v2cmowmbB881
CmoCh08G005380Watermelon (97103) v2cmowmbB883
CmoCh08G005380Watermelon (97103) v2cmowmbB884
CmoCh08G005380Wax gourdcmowgoB1082
CmoCh08G005380Wax gourdcmowgoB1117
CmoCh08G005380Wax gourdcmowgoB1126