CmoCh08G003950 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G003950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Peptide chain release factor 1
Location	Cmo_Chr08 : 2435086 .. 2442383 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTCTCGCTTCTGTTTCTGTTTGGAATCTCGGTAGCAGCGATGAATTTTTTCTCTCCGACCACCGCAACTCGGACGATTCCGGGATGTTTTCTTTTTCCGCCACGATACGGTGACTTCTCGAGAAGATGTTCTCTGGAGCTTAAACGTTCTGCACCTCCGTTTAGAGCTTCAACTCTCGTTTGCATGGCGGTTCGTACATTTCCGACCGATAAATGTAGATAGATTTCCGGACGTTTTGTCCTCGAGAGGGAACATGTCATCTTATTGTTTGGATTGGTTTTAATTGAATTTCAGTTTCTTTATGTTTCGAGCTCACTATGTTTTCTTTCGCTGAAGTTATTGGAGATGAATTCGTGGCACAACTGGTCTGGCTGAGGTTTATGGCAAGTGATGTTTGTATTTTATTATTTCAGGAACCTTATTTGATCACGAAGCTGGAATCAGCCGAGAATACGTGGAAAGAGTTATCGGTACTCACTGATTTATGGTTCAATAGCATTTTAATTTGTTTGCTGAAGGTGCTTGTATCCATCAATTTTTTTAGCGTGGTTATAATTGGAACAAAATTTTGGCATGATTTTTAGCTTAGAAATTTATAGTTTAAAATGCCAATAAGTCTTAACTTCTGTCTCAATGTTGTTATAGTTTGACTACAACGATAATTGAACTTAGTTTTCTTCCGAGTGAAAATCCAGGGAAGGGGAAATTAGCTAAGATATGTCTTGGAAAAGTTAAGAGCTCTTAGAATTATCATGCTCCATTATATTATGAATTTTCCTTTCATGAAGATATCAGGAAACGTAATTTGCAGTTAAAATGAAACCGTGGCTACAGTGAACTCTGTATATTGTTTCTGCATGACTGTAATTCTGCTGCGAACTTTTAAATTTTAAAATAAGTAAATTAAGTACCCAACGATTCCACTTAGTTACTTACTTTTAGAGTACTAACAACAAAAGAAGAGGTAGAAGAACGTCCTCACTAGAGACCTTGTCTATGTGCCTGGTATTATGATACTCTTTAGGCAAAAAATGAAGAAATGTATTTTGGATTTGACTATAGCCTATAATGATAAACTAATAATTCCTTGCTTTCCCACTACACTTGGGATTTGAATTGAAATTTTTTAGCTATCACAAGTATTTTTTTAACCACCGCTTTTCTCCTGAAATTTTTGTAAAACTAATGAAATGTTTATGAATAAAATCTAGGTGTATTAACTGTAATCAAGTTTCTCCCCTCATTCTGTAGGCCACATTTGGAACTTGCATTTACATTCTCAGTGCTCCAATTATGCTTTTCATTTGGTTATTGTTTTATTATTCTTCACCACCAGAATCATAGTTGGTATATTTATTTAGGTCAAGCTGGCTGATCCAGATATTGTCTCGAACCCCACAGAGTATCAAAAACTTGCCCAATCAATGTCAGAGCTTGACGAGGTATAGCACAACTATTTGCCTCTGATATTGTGATTTATAGGAACAGTTAGAAGAACCTTCCCCTTTTTTCCCTTCAGATTGTTTCTTTTCAAAACTGACGTTACACTATTCCTATTGGTTGGTTGGTGTGGGATGCCGGGACAGGTGGTATCAACCTTCAGAAGATTCAAGGAATGTGAGAAGCAGTTGCAGGAGGCAAAAGGTTGACTGATAAGTACTTCAAAAAAATTTATGACAATTTTTTTTTTTTTTTTTGAATTTGTCTTATTTTCTTCTTCTTTGTCATGATTATCGTGTCAGCTTTAGCAAAAGAAAGTGGGAATGACGAGGATATGGCAGAGATGATTGCTTTAGAAATCAGTTCTTTATCCAGTCAACTCAAAGACATTGAGGAGAAGCTTAAGGTGCTTTTGATTCATGAACTTGATCATTACATGTGTGTATATTTTGGATAGGAGTCAAACTTTTATTAATGTTAATGTGCGTATAATTCTCTTTATCGATGTCGTTTTGTTTCCCTGTTTGGAGTGGGGTGGAGGTCCTTGATTTTCAATCCTTCACAGTTTGTGGTTCAGAGTTTTCATATTCTGCTTTTTAACGAGCATCCGTTCAGACAGATGTCTAAACGCACTCTATTTTGTTTCTTTAGCAATTTTCATCAGTTTTTGTTATTTTCTCTTCTTTTGTAAGTTGGTAGAATTATTTAATTTCTGAAACAAATAGGTAGTGGCATTGTAGCTTGGTTCTTTACTAATTGTCAGATTTTTACAAGCAAATACTGTGCTTTCTTGTCATTTGTGTGGTTTGATTGTTTTCTTTTTTTGGGGACTTTAGTTATTTCCTGGTATTCTACAAGTTGCATCTTATGTTTCTCTGAATCTGAAGACATTATGTCACAATTTTCTTTATCAGGTGATGTTGCTTCCATCTGATCCTCTTGATGCAAGAAATATTATGCTTGAAGGTCAGCTTCCTCAGTTTCCAATTTTATGCCATCTGAATATGAAAAATTTTAAAGTCCATTTTGCATAGATTCATTGTGCAAAAATGATATACTTATTGGACAATTAGAATTCTGTAAAAGTAAACTGCTTACACTTGTGTGTTTTGTTTATGCTGATTAAAAATTGTAATATTCTTCTTGCCATGCAGTCCGAGCAGGTACGGGTGGTGATGAAGCTGGAATCTGGGCTGGTGATCTTGTAGGTACATGCTTCTTTTATCCTTCAAGTACTACAGAAAATTGAGCACATATTCTTTTTTTGGTTGCCCTTACAATAGCCGAACATGAGAAATATTGGTTATAATAGAAAATCGCTTGATATCTTTGTAAGAAATGCTATGTCAAATAAACATATTATTTGAAGTGATCTATGCTTTATATTCCCCTTTCTAACCTTTTAGGTCTTTTAAGTGTATTGAAAAAGTATTGATAGGCTTAGTGAACTTCCATGTTCTGAAGTTTCTTCCATATACATTCTTGCATTGCTTTGATTTTAGACCTCCGTTATCCTATGTATTGTTCTGTGTTACCATTTCTTCTCCTCTCATCTTTTCCATTTATGTAACAGGTCCGTATGTATCAGAAATACAGTGAGCGGAATTCTTGGAAATTTTCCCCTATTTCAAGTTCTGAGGTATGTGTTTCTAAACTTCCCAGAAGAAGTAAACATTCTAGTGCTTTCTGTATGTCTAAAAGAACTTATACTGTTCACCTTTCAGGCTGAAAAAGGTGGATTCAAAACTTATGTGTTGGAAATCAAAGGAAATCGTGTCTACAGTAAATTAAAATATGAGTCTGGTGTTCACCGGGTTCAACGTGTTCCTCAAACAGAAACACAGGGCCGTGTGCATACTTCCACTGCTACAGTAGCCATCATGCCAGAGGTAAACAATTTCCTGAATTTTCTGTTGAATGTTGATTAATTGTGTCTGATTCTTGTAAAAAAAGTATTGCATGCCCCAATCAGACTAATGTCTAGAATAACATTACGTGAGTTTGTTAATTTCCTCCCTGACAGTTGCTGATGTTAATTCGTGTAGTTTCCTTCTTGTTCCCCTTCCCTTAATAGGTTCCTGATATATTTCTTGTACTCCGTTATTATCTGGATAGTCTTCAATACTTTTAGCACTTGACAATTATAACGTGGAAAAGTTGTACCGCAGCTTTAAAATCCCTAGACGGTGAATTAATGTGGGATTACTAATCACGGTTTTCTGACATATCTCACCAGTGCCTTAACATGAAGACCTGAGCAGATAACTGTAGACCTATCCTTCATATTTATTTAGTTGATGTTGATAGTGTCCATACTGTTTCTTTGTAGGAGTAGTTATGATTTAGATATGATAACTTCTCTTGACTTGACTATGCATTCACATCTTGATCAGCTATATACTTTCTCTTGATTGGTTGAGCTTGTTTCATTCTTGCATCTAGGCAGATGAAGTTGAGGTTGTGATTGATCCAAAAGACATTGAACTAACAACTACAAGATCTGGGGGTGCAGGAGGTATAAATTTACTTAATTGATTCAAATATTACTTTGGCTAGCTCTCTGTATCTGTTCTCATAAACCAAGAAATGGTAGAATTAACCTTTTTTTTTTCCAATGGTTATGCAGGGCAGAATGTGAACAAGGTGGAGACAGCAATTGATCTTTTCCACAAGCCAACAGGAATTCGCATTTTTTGCACTGAAGAAAGGACTCAACTTCAGAACAAGCATCGAGCTTTTCAATTGCTGCGAGCCAAACTGTGAGCATCCATTACACCATAAACATTTGCCATTTTATCATATAAATTATATGCACTTTATTCATATAATTCCTATATTTTTTGCCGAAACAAATAATTAAATGAACTTCATGACCATTTCTAGGGTTTTCTCAAATAATTGAAGAAACTTTATTGTCATTGCAATATTCCGAAGGAATTTGGCTGGTCATTGGTATGGGGCAATAAAAATAAAATAAAATAACCGAGATTGAACAGTTGTTCATTCAGTTCTGCACAACCCTTGTGATCAACTGAGGCATCAAAGAAATCTTAATTTTCTTTTTCTCTCTCACGCACAGCCTCCACCACCCATTGTTCACACCCAACCCGGGCCAGCCCCTTCCCCAACCTTTGTCCATGCTTGCCCTTGTATGTTCTGGCTTAGCCTCTCGCTTCCTATTTGCCAACCCCCTCCAATCCAACCTGGTCGGTTGGTCAGTTCTTTCGTCCAAAGAAAGCAGAAAAGTTAGTTTCTTATGCCCTGCCCCAACTGACAATCAGCTCAAGGGTACCTCTACTCTGATCTCCACTGACTTTCGCCCCTAGTCATTGGTTTCTTAACCCTCCTATTCAATCTCTTGGCATTAATTTTTCAAAAAGAAAATGATGTTTTTCTAATATATATTGACTTGCCTTTCATAGTGGACAGGGTGATAATTTTGCTGGTTTCAACATCGTGTAAATTCATGAATTTAATCCCCCTTCCCCTTCCCCCTTCTTTTCCTTTTCAGTTATGAGATCAAAGTGAGGGAACAGCAGGAGAGGATCAGGAATCAACGAAAATTACAGGTAAATATTAGTTTTCTCTTTCTTTCTTTTCTCGTTATCATTTATCCATGTTTAGCAAAGAACACCTTTTTGTGCATTTGGTTTTTTGAGTGTCCATGTACTTTTTCATTTTCTCTTAATGAAGGTTTGGTTCTTTATTAGAAAAAATCAGACAATAGTTTCTGAAGTTATTACAGTCAGTTAGTCGCTATATTTGATAAACTTGCCTAGGAAACGAAGAGCTGTTACCCTCCATTTTTTTCAAGCACTTCCTAGTCTAGAGTAATTTCTAAGTAAGCACAAAATTTCATTGGCAACATTATTGGAAACGGCAATGTCCATTATGCAATACTATTTGGATGGAATATCAAAAACTAAAAATCTCTTGGACTCCACAAACCCATACCCAGAGGTCTTAGGTGCACAAATACGACTGTTTTAGAGCACGATAATTATATTTTAGGAATCTTTTATCAATTTTTTTCTTCTTTCTGCTGTGATAATAATCTACTTCATAATGTTGCCAAATCATTAGTTTTTGCTCAATTTTACAATATTCTACGTGTGTAACTCTAAATCTGAAAGCAAGTAGTTGTCACATTAATGCAAGGCAATTGTACAAGCAGACCCCAGCCGAATATTCTCATAAAAGCAATCGAGTATAAGCTGTTCTTCAATTTCAGTGTTCTTATTTTCTTGTTGTCCTCTTTTCTGTCTCCTCACAGACATTTTCAAAATTGGTTGTCAATTTTTTAATGATGAAACTTCATGCAAATCACTGCTTGGGGTTGTTGCAACTTGAATTTGTTAAACGAAATTGAATACCTGATTATAACTTCTCAATGTAATTTTATTAGGCAATCAAATTGTTTTCATTGGTGTATTCCCTCGTTCTAAAAGGTTCTGTTGCAGGTTGGTACAGGTGCCCGTGCTGAGAAAATACGGACTTACAATTACAAGGTATGATATTGGTTATATTTCTGGCTTGAAACTGATGAAAAAAGAAATACAGCTACTGTCATAAAGCAAGCTATCCATATGGTACCACAAAGATGTTGAAGACCAAGAAATAGTTCTAAAAGATAAATTAGTGCATGAAGTATTAACTTGTTATGAACGTTATATAAAAGCAACTATTATTGGTTGGCCTAGTGGACAAGAGAGTAATGGACCTATAGGGAACAAGTTCAGTCACGATCACCTAGACTTAATATTCGATAAGTATCTTGACAGCCAAATGTAGTAGGGTTAGACGGTTGTTCCATGAAATTAGTTGAGGTGCTAGCAAGCGTGTTTGGATCCTCATTGTTATATAAAAGAATATAAAAAAATTAGAAAAGGACGGAAAAGAATAAAAAAATTAAAAAAAGACGAAGGAAGGACCAAACCAAAAGGGTTTGAAAAACCGATCATGTCACAAACAAACTCACAAATTGTCACGACAACCATGTATACTCGTCTCACTAATGAAACGATCGAACTTGTGAAACTATCATTTCCAGTGTGTAGTTCAAGGTGGAAATGAAACATCTTAGCATAATTCATAGAAATTGATCCTAACAGACTGATAATTTCCATAGAATTCACTAACTTTTGGATTTTCCTCATATTAGGATAACAGGGTGACTGACCACAGGTTGAAAATGAACTTCGAGCTCACATCCTTTATTGATGGTGATATAGAGAACGCAGTTCAGGTAATATTCTCTCTCATCTTTTTACCTTTTGAACTCTCATTGAAAGCAAAAAAGTCATATCCTCCATTTTTTTTTCAATCAAGGCATGTGTTGCCATGGAACAAAAAGAACTCATGGAAGAATTGGTTCAATCTACCGGGGCTCCAACCACTTGAATTTTCATCATTTCCTGCCAATAGTTTGGGCCCTCATAACACGTATTTCTTTGAGAACCGTATGAACTGCTATGAGGTTAGGTAAAAACCATTCACCATTATTCATAATTTTTCTGCACATGGGCCTGCCTGCTATATGTATGATTGATATACACATACTGAGATTATACCATTTAGAGTTGGGTTTTTTGGCGTCAGTAGTCTGAAAATAGAAGGAGAAAAAGAAGAAATTAACCCATCCCATCCCCGCTAGAACTAGATTATGATGTTGATGCGACTTTACGAAATTAATTACATATTTTTCCTTTCTTGTATGGTTTACGAACTATTGTTTCGATGAATTTTCCATTGCTTTGGTTGGTTTGGGGATTCTTGTAGTCTCACATGCAGTTTTGTTGATCTTTGACTGACTTGGTCCAGTTTGGTTGATCATGTTATGAAAAGGGTGAAAGTTG

mRNA sequence

ATCTTCTCGCTTCTGTTTCTGTTTGGAATCTCGGTAGCAGCGATGAATTTTTTCTCTCCGACCACCGCAACTCGGACGATTCCGGGATGTTTTCTTTTTCCGCCACGATACGGTGACTTCTCGAGAAGATGTTCTCTGGAGCTTAAACGTTCTGCACCTCCGTTTAGAGCTTCAACTCTCGTTTGCATGGCGGAACCTTATTTGATCACGAAGCTGGAATCAGCCGAGAATACGTGGAAAGAGTTATCGGTCAAGCTGGCTGATCCAGATATTGTCTCGAACCCCACAGAGTATCAAAAACTTGCCCAATCAATGTCAGAGCTTGACGAGGTGGTATCAACCTTCAGAAGATTCAAGGAATGTGAGAAGCAGTTGCAGGAGGCAAAAGCTTTAGCAAAAGAAAGTGGGAATGACGAGGATATGGCAGAGATGATTGCTTTAGAAATCAGTTCTTTATCCAGTCAACTCAAAGACATTGAGGAGAAGCTTAAGGTGATGTTGCTTCCATCTGATCCTCTTGATGCAAGAAATATTATGCTTGAAGTCCGAGCAGGTACGGGTGGTGATGAAGCTGGAATCTGGGCTGGTGATCTTGTCCGTATGTATCAGAAATACAGTGAGCGGAATTCTTGGAAATTTTCCCCTATTTCAAGTTCTGAGGCTGAAAAAGGTGGATTCAAAACTTATGTGTTGGAAATCAAAGGAAATCGTGTCTACAGTAAATTAAAATATGAGTCTGGTGTTCACCGGGTTCAACGTGTTCCTCAAACAGAAACACAGGGCCGTGTGCATACTTCCACTGCTACAGTAGCCATCATGCCAGAGGCAGATGAAGTTGAGGTTGTGATTGATCCAAAAGACATTGAACTAACAACTACAAGATCTGGGGGTGCAGGAGGGCAGAATGTGAACAAGGTGGAGACAGCAATTGATCTTTTCCACAAGCCAACAGGAATTCGCATTTTTTGCACTGAAGAAAGGACTCAACTTCAGAACAAGCATCGAGCTTTTCAATTGCTGCGAGCCAAACTTTATGAGATCAAAGTGAGGGAACAGCAGGAGAGGATCAGGAATCAACGAAAATTACAGGTTGGTACAGGTGCCCGTGCTGAGAAAATACGGACTTACAATTACAAGGATAACAGGGTGACTGACCACAGGTTGAAAATGAACTTCGAGCTCACATCCTTTATTGATGGTGATATAGAGAACGCAGTTCAGGCATGTGTTGCCATGGAACAAAAAGAACTCATGGAAGAATTGGTTCAATCTACCGGGGCTCCAACCACTTGAATTTTCATCATTTCCTGCCAATAGTTTGGGCCCTCATAACACGTATTTCTTTGAGAACCGTATGAACTGCTATGAGGTTAGGTAAAAACCATTCACCATTATTCATAATTTTTCTGCACATGGGCCTGCCTGCTATATGTATGATTGATATACACATACTGAGATTATACCATTTAGAGTTGGGTTTTTTGGCGTCAGTAGTCTGAAAATAGAAGGAGAAAAAGAAGAAATTAACCCATCCCATCCCCGCTAGAACTAGATTATGATGTTGATGCGACTTTACGAAATTAATTACATATTTTTCCTTTCTTGTATGGTTTACGAACTATTGTTTCGATGAATTTTCCATTGCTTTGGTTGGTTTGGGGATTCTTGTAGTCTCACATGCAGTTTTGTTGATCTTTGACTGACTTGGTCCAGTTTGGTTGATCATGTTATGAAAAGGGTGAAAGTTG

Coding sequence (CDS)

ATGAATTTTTTCTCTCCGACCACCGCAACTCGGACGATTCCGGGATGTTTTCTTTTTCCGCCACGATACGGTGACTTCTCGAGAAGATGTTCTCTGGAGCTTAAACGTTCTGCACCTCCGTTTAGAGCTTCAACTCTCGTTTGCATGGCGGAACCTTATTTGATCACGAAGCTGGAATCAGCCGAGAATACGTGGAAAGAGTTATCGGTCAAGCTGGCTGATCCAGATATTGTCTCGAACCCCACAGAGTATCAAAAACTTGCCCAATCAATGTCAGAGCTTGACGAGGTGGTATCAACCTTCAGAAGATTCAAGGAATGTGAGAAGCAGTTGCAGGAGGCAAAAGCTTTAGCAAAAGAAAGTGGGAATGACGAGGATATGGCAGAGATGATTGCTTTAGAAATCAGTTCTTTATCCAGTCAACTCAAAGACATTGAGGAGAAGCTTAAGGTGATGTTGCTTCCATCTGATCCTCTTGATGCAAGAAATATTATGCTTGAAGTCCGAGCAGGTACGGGTGGTGATGAAGCTGGAATCTGGGCTGGTGATCTTGTCCGTATGTATCAGAAATACAGTGAGCGGAATTCTTGGAAATTTTCCCCTATTTCAAGTTCTGAGGCTGAAAAAGGTGGATTCAAAACTTATGTGTTGGAAATCAAAGGAAATCGTGTCTACAGTAAATTAAAATATGAGTCTGGTGTTCACCGGGTTCAACGTGTTCCTCAAACAGAAACACAGGGCCGTGTGCATACTTCCACTGCTACAGTAGCCATCATGCCAGAGGCAGATGAAGTTGAGGTTGTGATTGATCCAAAAGACATTGAACTAACAACTACAAGATCTGGGGGTGCAGGAGGGCAGAATGTGAACAAGGTGGAGACAGCAATTGATCTTTTCCACAAGCCAACAGGAATTCGCATTTTTTGCACTGAAGAAAGGACTCAACTTCAGAACAAGCATCGAGCTTTTCAATTGCTGCGAGCCAAACTTTATGAGATCAAAGTGAGGGAACAGCAGGAGAGGATCAGGAATCAACGAAAATTACAGGTTGGTACAGGTGCCCGTGCTGAGAAAATACGGACTTACAATTACAAGGATAACAGGGTGACTGACCACAGGTTGAAAATGAACTTCGAGCTCACATCCTTTATTGATGGTGATATAGAGAACGCAGTTCAGGCATGTGTTGCCATGGAACAAAAAGAACTCATGGAAGAATTGGTTCAATCTACCGGGGCTCCAACCACTTGA

Homology

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BLAST of CmoCh08G003950 vs. Swiss-Prot
Match: APG3_ARATH (Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana GN=APG3 PE=2 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 7.3e-172
Identity = 306/372 (82.26%), Postives = 344/372 (92.47%), Query Frame = 1


Query: 42  RASTLVCMAEPYLITKLESAENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTF 101
           R   LVCMAEPYLI K+ES E TWKELSVKLADPD+VSN +EYQKLAQSMSELDEVV+ F
Sbjct: 45  RTRRLVCMAEPYLIRKMESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVF 104

Query: 102 RRFKECEKQLQEAKALAKESGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDA 161
           RRFK+CEKQL E+K LAKE+G+DEDMAEMI  EI+SL+ +++++E++LKV+LLPSDPLDA
Sbjct: 105 RRFKDCEKQLLESKVLAKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDA 164

Query: 162 RNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKG 221
           RNI+LEVRAGTGGDEA IW GDLVRMYQ+YSER+SWKFS +S SEAE GG+KT V+EIKG
Sbjct: 165 RNILLEVRAGTGGDEAAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKG 224

Query: 222 NRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRS 281
           NRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELT+ RS
Sbjct: 225 NRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARS 284

Query: 282 GGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQER 341
           GGAGGQNVNKVETAIDLFHKP+GIRIFCTEERTQ++NK RAFQLLRAKLYEIKVREQQE+
Sbjct: 285 GGAGGQNVNKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEK 344

Query: 342 IRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQK 401
           IRN+RK QVGTGAR+EKIRTYNYKD+RVTDHRLKMNF LT+F+DG +E+AVQAC A+EQK
Sbjct: 345 IRNERKSQVGTGARSEKIRTYNYKDSRVTDHRLKMNFALTTFLDGALEDAVQACAALEQK 404

Query: 402 ELMEELVQSTGA 414
           ELMEEL +S  A
Sbjct: 405 ELMEELSESVAA 416

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BLAST of CmoCh08G003950 vs. Swiss-Prot
Match: RF1_TRIEI (Peptide chain release factor 1 OS=Trichodesmium erythraeum (strain IMS101) GN=prfA PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 2.4e-130
Identity = 230/366 (62.84%), Postives = 294/366 (80.33%), Query Frame = 1


Query: 49  MAEPYLITKLESAENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECE 108
           MAE YL+ KL+S E T+ EL+++LADPD+  +P+E+QKLA++ S L+EVV+ +  +K  +
Sbjct: 1   MAETYLLDKLKSVEQTYNELTLRLADPDVAKDPSEFQKLAKARSSLEEVVNCYVEWKNAQ 60

Query: 109 KQLQEAKALAKESGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEV 168
           ++L +AK + KE+  D +M EM  +E+  L ++L+ +E ++K+ LLP DP D +NIMLE+
Sbjct: 61  EELADAKEILKEAVGDLEMQEMAKVEVEDLEAKLESLENQMKIALLPRDPNDDKNIMLEI 120

Query: 169 RAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKL 228
           RAGTGGDEA IWAGDLVRMY +YSE  SWK S +S S A+ GGFK  +LEIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYSENQSWKVSLLSESLADMGGFKEAILEIKGDHVYSKL 180

Query: 229 KYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRSGGAGGQN 288
           K+E+GVHRVQRVP TE  GRVHTSTATVAIMPE D+VEV ID KDIEL+T RSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVEIDQKDIELSTARSGGAGGQN 240

Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKL 348
           VNKVETA+DLFHKPTGIRIFCT+ER+QLQN+ RA Q+LRAKLYEIK++EQQ  + + R+ 
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTQERSQLQNRERAMQILRAKLYEIKLQEQQAEVSSIRRS 300

Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQKELMEELV 408
           QVGTG+R+EKIRTYNYKDNRVTDHRL  NF L   ++GDIEN +QAC+  +Q+E ++EL 
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLNQNFSLVPLLEGDIENVIQACITQDQQERLQELA 360

Query: 409 QSTGAP 415
            S+  P
Sbjct: 361 ASSSTP 366

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BLAST of CmoCh08G003950 vs. Swiss-Prot
Match: RF1_CYAP7 (Peptide chain release factor 1 OS=Cyanothece sp. (strain PCC 7424) GN=prfA PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 7.0e-130
Identity = 231/362 (63.81%), Postives = 292/362 (80.66%), Query Frame = 1


Query: 49  MAEPYLITKLESAENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECE 108
           MAE YL+ KL+S E T+KEL+ +LADPDI +NP E Q++A++ S L+E V+T+  +++ +
Sbjct: 1   MAEAYLLEKLKSVEQTYKELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTK 60

Query: 109 KQLQEAKALAKESGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEV 168
           +++  A+ + KE+G D +M EM ALE+  L  QL+ +E KLKV+LLP DP D +NIMLE+
Sbjct: 61  EEITGARQILKEAGGDSEMREMAALEVEELEEQLEQLENKLKVLLLPRDPNDDKNIMLEI 120

Query: 169 RAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKL 228
           RAGTGGDEA IWAGDLVRMY +Y+E  +W    +S S A+ GGFK  +LEIKG++VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQNWVVKLVSESLADMGGFKEAILEIKGDQVYSKL 180

Query: 229 KYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRSGGAGGQN 288
           K+E+GVHRVQRVP TE  GRVHTSTATVAIMPE DEVEV IDPKDIE++T RSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEVQIDPKDIEVSTARSGGAGGQN 240

Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKL 348
           VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA Q+LRAKLYE+K+REQQE + + R+ 
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVSSMRRS 300

Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQKELMEELV 408
           QVGTG+R+EKIRTYNYKDNRVTDHRL  NF L   ++GDIE  +Q+C+  +Q+E + EL 
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFSLVGALEGDIEVIIQSCIGKDQQERLAELA 360

Query: 409 QS 411
            S
Sbjct: 361 NS 362

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BLAST of CmoCh08G003950 vs. Swiss-Prot
Match: RF1_THEEB (Peptide chain release factor 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=prfA PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.6e-129
Identity = 229/359 (63.79%), Postives = 292/359 (81.34%), Query Frame = 1


Query: 49  MAEPYLITKLESAENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECE 108
           MAE YL+ KL + E T+ EL+ +LADPD+  NPTE+QK+A+S + L+E V+ +  ++   
Sbjct: 1   MAEAYLLEKLRTVEQTFTELTRRLADPDVAVNPTEFQKVARSRAALEETVNAYHEWQSLN 60

Query: 109 KQLQEAKALAKESGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEV 168
           +QL +A+ L KE+ N+ ++ +M   EI+ LS ++  +EE+LK++LLP DP D +NIMLE+
Sbjct: 61  QQLVDARQLHKEAANEPELRQMAEEEIAHLSHRIAQLEERLKILLLPRDPNDEKNIMLEI 120

Query: 169 RAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKL 228
           RAG GGDEAGIWAGDLVRMY +Y++   W+ + +S S AE GGFK  +LEIKG+RVYSKL
Sbjct: 121 RAGAGGDEAGIWAGDLVRMYSRYAKTQGWQVTLVSESLAEMGGFKEAILEIKGDRVYSKL 180

Query: 229 KYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRSGGAGGQN 288
           KYESGVHRVQRVP TE  GR+HTSTATVA+MPE DEVEV IDPKDIELTT RSGGAGGQN
Sbjct: 181 KYESGVHRVQRVPATEASGRIHTSTATVAVMPEVDEVEVEIDPKDIELTTARSGGAGGQN 240

Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKL 348
           VNKVETA+DL+HKPTGIRIFCTEER+QL+NK RAFQ+LRAKLYEIK+REQQE I + R+ 
Sbjct: 241 VNKVETAVDLYHKPTGIRIFCTEERSQLKNKERAFQILRAKLYEIKLREQQEAITSMRRS 300

Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQKELMEEL 408
           QVGTG R+EKIRTYNYKD+RVTDHRL  NF L+S ++GD+E  +QAC++ +Q+E + +L
Sbjct: 301 QVGTGDRSEKIRTYNYKDDRVTDHRLGQNFSLSSVLEGDLEPIIQACISRDQQEQLAQL 359

[Close]

BLAST of CmoCh08G003950 vs. Swiss-Prot
Match: RF1_MICAN (Peptide chain release factor 1 OS=Microcystis aeruginosa (strain NIES-843) GN=prfA PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 5.9e-129
Identity = 226/359 (62.95%), Postives = 291/359 (81.06%), Query Frame = 1


Query: 49  MAEPYLITKLESAENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECE 108
           MAE YL+ KL+S E T+KEL+ +LADPD+  NP E  +LA+S + L+E V+T+  +++ +
Sbjct: 1   MAESYLLDKLQSVEQTYKELTRRLADPDVTGNPGELHRLAKSRASLEETVNTYEIWQKSQ 60

Query: 109 KQLQEAKALAKESGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEV 168
           + L  AK + KES +D ++ EM ALE++ L  ++  +E++L ++LLP DPLD +NIMLE+
Sbjct: 61  EDLIGAKQIFKESASDPELREMAALEVAELEEKIATLEDQLTILLLPRDPLDEKNIMLEI 120

Query: 169 RAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKL 228
           RAGTGGDEA IWAGDLVR+Y KY+E  +WK S +S S+A+ GGFK  +LEIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSKYAETQNWKVSLLSESQADMGGFKEAILEIKGDNVYSKL 180

Query: 229 KYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRSGGAGGQN 288
           K+E+GVHRVQRVP TE  GRVHTSTATVAIMPE D+VEV IDPKDIELTT RSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQN 240

Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKL 348
           VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA Q+LRAKLY++K++EQQE + + R+ 
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQEAVSSMRRS 300

Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQKELMEEL 408
           QVGTG+R+EKIRTYNYKDNR+TDHRL  NF L   +DGDIE  +Q+C+A +Q+E + EL
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRLTDHRLNQNFSLDRILDGDIEEVIQSCIAKDQQEKLAEL 359

[Close]

BLAST of CmoCh08G003950 vs. TrEMBL
Match: A0A0A0K944_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394660 PE=4 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 7.3e-203
Identity = 369/416 (88.70%), Postives = 387/416 (93.03%), Query Frame = 1


Query: 1   MNFFSPTTATRTIPGCFLFPPRYGDFSRRCSLELKRSAPPFRASTLVCMAEPYLITKLES 60
           M+ F+PTTA  TIP  FL PPR+    RRC+L+LKR APPFRASTL+CMAEPYLI KLES
Sbjct: 1   MSIFNPTTAAPTIPSTFLLPPRHSGLFRRCALQLKRFAPPFRASTLICMAEPYLIVKLES 60

Query: 61  AENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECEKQLQEAKALAKE 120
           AE TWKELSVKLADPDIVSNPTEYQKLAQS+SELDEVVSTFR+FKECEKQL+E    AK+
Sbjct: 61  AEKTWKELSVKLADPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEKQLEE----AKD 120

Query: 121 SGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW 180
           SGNDEDM EMIALEISSLSS+LKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW
Sbjct: 121 SGNDEDMVEMIALEISSLSSELKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW 180

Query: 181 AGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKLKYESGVHRVQRV 240
           AGDLVRMYQKYSERNSWKFSP+SSSEAEKGG+KTYVLEIKG RVYSKLKYESGVHRVQRV
Sbjct: 181 AGDLVRMYQKYSERNSWKFSPVSSSEAEKGGYKTYVLEIKGQRVYSKLKYESGVHRVQRV 240

Query: 241 PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRSGGAGGQNVNKVETAIDLFH 300
           PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELT  RSGGAGGQNVNKVETAIDLFH
Sbjct: 241 PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTIARSGGAGGQNVNKVETAIDLFH 300

Query: 301 KPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKLQVGTGARAEKIR 360
           KPTGIRIFCTEERTQLQNK RAFQLLRAKLYEIKVREQQE+IRNQRKLQVGTGARAEKIR
Sbjct: 301 KPTGIRIFCTEERTQLQNKLRAFQLLRAKLYEIKVREQQEKIRNQRKLQVGTGARAEKIR 360

Query: 361 TYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQKELMEELVQSTGAPTT 417
           TYNYKDNRVTDHRLK NFELTSF++GDIE+AVQACV MEQKEL+EEL QS  A  T
Sbjct: 361 TYNYKDNRVTDHRLKTNFELTSFLEGDIEDAVQACVTMEQKELLEELAQSAVASAT 412

[Close]

BLAST of CmoCh08G003950 vs. TrEMBL
Match: A0A067JW24_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13873 PE=3 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 2.6e-184
Identity = 339/389 (87.15%), Postives = 362/389 (93.06%), Query Frame = 1


Query: 28  RRCSLELKRSAPPFRASTL--VCMAEPYLITKLESAENTWKELSVKLADPDIVSNPTEYQ 87
           RR SL L+   PP R   L  VCMAEPYLITKLESAE TWKELSVKLADPD+VSNP+EYQ
Sbjct: 27  RRSSLLLR---PPQRRRNLRIVCMAEPYLITKLESAEKTWKELSVKLADPDVVSNPSEYQ 86

Query: 88  KLAQSMSELDEVVSTFRRFKECEKQLQEAKALAKESGNDEDMAEMIALEISSLSSQLKDI 147
           KLAQS++ELDEVVST+RRFKECEKQL E KALAKE GNDEDMAEMIA EI SLS++LK++
Sbjct: 87  KLAQSVAELDEVVSTYRRFKECEKQLVETKALAKEEGNDEDMAEMIAYEIESLSNELKEL 146

Query: 148 EEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPISSS 207
           EEKLKV+LLPSDPLDARNIMLEVRAGTGGDEAGIWAGDL+R+YQ+YSERNSWK+S ISSS
Sbjct: 147 EEKLKVLLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLIRLYQRYSERNSWKYSLISSS 206

Query: 208 EAEKGGFKTYVLEIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEV 267
           EAEKGGFKT V+EIKGNRVYSKLKYESGVHRVQRVPQTE QGRVHTSTATVAIMPEADEV
Sbjct: 207 EAEKGGFKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV 266

Query: 268 EVVIDPKDIELTTTRSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKHRAFQL 327
           EVVIDPKDIELTT RSGGAGGQNVNKVETA+DLFHKPTGIRIFCTEERTQL+NK+RA QL
Sbjct: 267 EVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERTQLKNKNRALQL 326

Query: 328 LRAKLYEIKVREQQERIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFID 387
           LRAKLYE+KVREQQE IRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSF+D
Sbjct: 327 LRAKLYEMKVREQQESIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLD 386

Query: 388 GDIENAVQACVAMEQKELMEELVQSTGAP 415
           GDIENAVQAC AMEQKEL+EEL +S G P
Sbjct: 387 GDIENAVQACSAMEQKELLEELAESVGVP 412

[Close]

BLAST of CmoCh08G003950 vs. TrEMBL
Match: W9SBM3_9ROSA (Peptide chain release factor 1 OS=Morus notabilis GN=L484_020489 PE=3 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 2.2e-183
Identity = 329/375 (87.73%), Postives = 352/375 (93.87%), Query Frame = 1


Query: 39  PPFRASTLVCMAEPYLITKLESAENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVV 98
           PP R   ++CMAEPYLITKLESAE TWKELSVKLADPD+VSNP+EYQKLAQSM+ELDEVV
Sbjct: 36  PPARCRRVICMAEPYLITKLESAEKTWKELSVKLADPDVVSNPSEYQKLAQSMAELDEVV 95

Query: 99  STFRRFKECEKQLQEAKALAKESGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDP 158
           STFRRFK+CEKQL+E KAL KE GNDEDM E+IA EI SLSS++K++EEKLKV+LLPSDP
Sbjct: 96  STFRRFKDCEKQLEETKALEKEDGNDEDMTEIIAYEIESLSSEIKELEEKLKVLLLPSDP 155

Query: 159 LDARNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLE 218
           LDARNIMLEVRAGTGGDEAG+WAGDLVRMYQKYSERNSWKFSP+SSSEAEKGGFKTYV+E
Sbjct: 156 LDARNIMLEVRAGTGGDEAGLWAGDLVRMYQKYSERNSWKFSPLSSSEAEKGGFKTYVME 215

Query: 219 IKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTT 278
           IKGN VYSKLKYESGVHRVQRVPQTE QGRVHTSTATVAIMPEADEVEV IDPKDIELTT
Sbjct: 216 IKGNHVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVEIDPKDIELTT 275

Query: 279 TRSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQ 338
            RSGGAGGQNVNKVETA+DLFHKPTGIRIFCTEERTQL+NK RA QLLRAKLYEIKV EQ
Sbjct: 276 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERTQLRNKTRALQLLRAKLYEIKVTEQ 335

Query: 339 QERIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAM 398
           QE+IRNQRK QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSF+DGDIENAVQAC A+
Sbjct: 336 QEKIRNQRKSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIENAVQACAAI 395

Query: 399 EQKELMEELVQSTGA 414
            QKEL+EEL +S GA
Sbjct: 396 YQKELLEELAESVGA 410

[Close]

BLAST of CmoCh08G003950 vs. TrEMBL
Match: D7TP29_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g01470 PE=3 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 2.5e-182
Identity = 330/384 (85.94%), Postives = 355/384 (92.45%), Query Frame = 1


Query: 31  SLELKRSAPPFRASTLVCMAEPYLITKLESAENTWKELSVKLADPDIVSNPTEYQKLAQS 90
           S  L R +   R   +VCMAEPYLITKLESAE TWKELSVKLADPDIVSNP+EYQKLAQS
Sbjct: 26  SFALFRPSRTHRTPRIVCMAEPYLITKLESAEKTWKELSVKLADPDIVSNPSEYQKLAQS 85

Query: 91  MSELDEVVSTFRRFKECEKQLQEAKALAKESGNDEDMAEMIALEISSLSSQLKDIEEKLK 150
           M+ELDEVVSTF+RFK+CEKQL+EAKALAKE G D DMAEMIA EI +L++QLK++EE +K
Sbjct: 86  MAELDEVVSTFKRFKDCEKQLEEAKALAKEDGIDADMAEMIAYEIGTLTNQLKELEENIK 145

Query: 151 VMLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPISSSEAEKG 210
           V+LLPSDPLD+RNI+LEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWK++P+SSSEAEKG
Sbjct: 146 VLLLPSDPLDSRNILLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKYAPVSSSEAEKG 205

Query: 211 GFKTYVLEIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVID 270
           GFKTYVLE+KGN VYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVID
Sbjct: 206 GFKTYVLEVKGNCVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVID 265

Query: 271 PKDIELTTTRSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKHRAFQLLRAKL 330
           PKDIELTT RSGGAGGQNVNKVETA+DLFHKPTGIRIFCTEERTQLQN+ RA QLLRAKL
Sbjct: 266 PKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERTQLQNRSRALQLLRAKL 325

Query: 331 YEIKVREQQERIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFIDGDIEN 390
           YEIKVREQQE IRNQRK QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSF+DGDIE 
Sbjct: 326 YEIKVREQQELIRNQRKSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIET 385

Query: 391 AVQACVAMEQKELMEELVQSTGAP 415
           AVQ+CVAMEQKEL+EEL  S   P
Sbjct: 386 AVQSCVAMEQKELLEELAHSVATP 409

[Close]

BLAST of CmoCh08G003950 vs. TrEMBL
Match: A0A061DQ78_THECC (Peptide chain release factor 1 isoform 2 OS=Theobroma cacao GN=TCM_004560 PE=3 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 1.5e-179
Identity = 332/413 (80.39%), Postives = 364/413 (88.14%), Query Frame = 1


Query: 1   MNFFSPTTATRTIPGCFLFPPRYGDFSRRCSLELKRSAPPFRASTLVCMAEPYLITKLES 60
           MN  + ++  R       FP R+    +   L + R    FRA  +VC+AEPYLITKLES
Sbjct: 1   MNGLAMSSTARMFTSFNHFPMRHRLAPQSRGLVVTRPWLTFRAPRIVCIAEPYLITKLES 60

Query: 61  AENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECEKQLQEAKALAKE 120
           AE TWKELSV+LADPD+VSN  EYQKLAQSM+ELDEVVSTFRRFK+CEKQL+E KAL++E
Sbjct: 61  AEKTWKELSVRLADPDVVSNHIEYQKLAQSMAELDEVVSTFRRFKDCEKQLEETKALSEE 120

Query: 121 SGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW 180
            G DEDMAEMIA EI+SLSSQLK++EEKLKV+LLPSDPLDARNIMLEVRAGTGGDEAG+W
Sbjct: 121 EGTDEDMAEMIASEINSLSSQLKELEEKLKVLLLPSDPLDARNIMLEVRAGTGGDEAGLW 180

Query: 181 AGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKLKYESGVHRVQRV 240
           AGDLVRMYQKYSERNSWK + +S SEAEKGGFKT V+E+KGNRVYSKLKYESGVHRVQRV
Sbjct: 181 AGDLVRMYQKYSERNSWKSTLVSYSEAEKGGFKTCVIEVKGNRVYSKLKYESGVHRVQRV 240

Query: 241 PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRSGGAGGQNVNKVETAIDLFH 300
           PQTE QGRVHTSTATVAIMPEADEVEV IDPKDIELTT RSGGAGGQNVNKVETA+DLFH
Sbjct: 241 PQTEAQGRVHTSTATVAIMPEADEVEVEIDPKDIELTTARSGGAGGQNVNKVETAVDLFH 300

Query: 301 KPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKLQVGTGARAEKIR 360
           KPTGIRIFCTEERTQLQNK+RA QLLRAKLYEIKVREQQE+IR+QRK QVGTGARAEKIR
Sbjct: 301 KPTGIRIFCTEERTQLQNKNRALQLLRAKLYEIKVREQQEQIRSQRKSQVGTGARAEKIR 360

Query: 361 TYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQKELMEELVQSTGA 414
           TYNYKDNRVTDHRLKMNFEL SF++GDIENAVQAC AMEQKEL+EEL +S  A
Sbjct: 361 TYNYKDNRVTDHRLKMNFELMSFLEGDIENAVQACTAMEQKELLEELAESVTA 413

[Close]

BLAST of CmoCh08G003950 vs. TAIR10
Match: AT3G62910.1 (AT3G62910.1 Peptide chain release factor 1)

HSP 1 Score: 604.7 bits (1558), Expect = 4.1e-173
Identity = 306/372 (82.26%), Postives = 344/372 (92.47%), Query Frame = 1


Query: 42  RASTLVCMAEPYLITKLESAENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTF 101
           R   LVCMAEPYLI K+ES E TWKELSVKLADPD+VSN +EYQKLAQSMSELDEVV+ F
Sbjct: 45  RTRRLVCMAEPYLIRKMESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVF 104

Query: 102 RRFKECEKQLQEAKALAKESGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDA 161
           RRFK+CEKQL E+K LAKE+G+DEDMAEMI  EI+SL+ +++++E++LKV+LLPSDPLDA
Sbjct: 105 RRFKDCEKQLLESKVLAKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDA 164

Query: 162 RNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKG 221
           RNI+LEVRAGTGGDEA IW GDLVRMYQ+YSER+SWKFS +S SEAE GG+KT V+EIKG
Sbjct: 165 RNILLEVRAGTGGDEAAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKG 224

Query: 222 NRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRS 281
           NRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELT+ RS
Sbjct: 225 NRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARS 284

Query: 282 GGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQER 341
           GGAGGQNVNKVETAIDLFHKP+GIRIFCTEERTQ++NK RAFQLLRAKLYEIKVREQQE+
Sbjct: 285 GGAGGQNVNKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEK 344

Query: 342 IRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQK 401
           IRN+RK QVGTGAR+EKIRTYNYKD+RVTDHRLKMNF LT+F+DG +E+AVQAC A+EQK
Sbjct: 345 IRNERKSQVGTGARSEKIRTYNYKDSRVTDHRLKMNFALTTFLDGALEDAVQACAALEQK 404

Query: 402 ELMEELVQSTGA 414
           ELMEEL +S  A
Sbjct: 405 ELMEELSESVAA 416

[Close]

BLAST of CmoCh08G003950 vs. TAIR10
Match: AT2G47020.1 (AT2G47020.1 Peptide chain release factor 1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-60
Identity = 119/295 (40.34%), Postives = 188/295 (63.73%), Query Frame = 1


Query: 80  NPTEYQKLAQSMSELDEVVSTFRRFKECEKQLQEAKALAKESGNDEDMAEMIALEISSLS 139
           +P E+ +  + + +L + +      +  +K++   K+L  ES +D+DM ++   E+    
Sbjct: 80  SPEEFSRANKELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAV 139

Query: 140 SQLKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKF 199
            + K ++  L   LLP D  D R+ +LEVRAGTGG+EA ++A D+ RMY++YS++  WKF
Sbjct: 140 EEEKRLQTLLLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKF 199

Query: 200 SPISSSEAEKGGFKTYVLEIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIM 259
             +  +E++  G+K     I G  VY KLK+ESG+HRVQR+P TE  GR+HTS  +VAI+
Sbjct: 200 DIVDITESDMKGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAIL 259

Query: 260 PEADEVEVVIDPKDIELTTTRSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNK 319
           P+ADEV+V +  +D+ + T RSGG+GGQ+ N   +A+ + H PTG+ +   +ER+Q  N+
Sbjct: 260 PQADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNR 319

Query: 320 HRAFQLLRAKLYEIKVREQQERIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRL 375
            +A ++L A+LYEI+    Q      R  Q+G+G R+ +IRTYN+   RVTDHR+
Sbjct: 320 AKALKVLCARLYEIERLRIQSSRSKLRSDQIGSGDRSGRIRTYNFPQGRVTDHRV 374

[Close]

BLAST of CmoCh08G003950 vs. TAIR10
Match: AT5G36170.1 (AT5G36170.1 high chlorophyll fluorescent 109)

HSP 1 Score: 156.0 bits (393), Expect = 5.1e-38
Identity = 111/348 (31.90%), Postives = 179/348 (51.44%), Query Frame = 1


Query: 58  LESAENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECEKQLQEAKAL 117
           L+  E     L  K  D     + T+ Q   +++S L+++    R   E +  +++A+ +
Sbjct: 104 LQQLEQEITNLESKATDTSFWDDRTKAQ---ETLSSLNDLKDRMRLLSEFKTMVEDAETI 163

Query: 118 AKESGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEA 177
            K +   +     +  E   +  +L    +K ++  L S P D    ++ + AG GG +A
Sbjct: 164 VKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDA 223

Query: 178 GIWAGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKLKYESGVHRV 237
             WA  L+RMY ++ E+  +K   +  S  E+ G K+  LEI+G   Y  +  E G HR+
Sbjct: 224 QDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRI 283

Query: 238 QRVPQTETQGRVHTSTATVAIMPEADE--VEVVIDPKDIELTTTRSGGAGGQNVNKVETA 297
            R     ++G   TS + V +MP   E  V + I  +D++++ TR+GG GGQNVNKVETA
Sbjct: 284 VRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETA 343

Query: 298 IDLFHKPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKLQVGTGAR 357
           + + H PTG+ + CTEER+QL NK RA   L+AKL  I   ++   I+  R    G   +
Sbjct: 344 VRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIR----GDAVK 403

Query: 358 AE---KIRTYNY------KDNRVTDHRLKMNFELTSFIDGDIENAVQA 395
           AE   +IR Y +      KD R T H      ++TS +DGD++  ++A
Sbjct: 404 AEWGQQIRNYVFHPYKLVKDVR-TGHETS---DITSVMDGDLDPFIKA 440

[Close]

BLAST of CmoCh08G003950 vs. TAIR10
Match: AT1G56350.1 (AT1G56350.1 Peptide chain release factor 2)

HSP 1 Score: 125.6 bits (314), Expect = 7.4e-29
Identity = 95/332 (28.61%), Postives = 171/332 (51.51%), Query Frame = 1


Query: 66  KELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECEKQLQEAKALAKESGNDE 125
           K LS +L   D+  +PT   K+++    L   +     F   E++L E   + K +  + 
Sbjct: 143 KVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTF---ERELLEHIDMLKLAKEEN 202

Query: 126 DMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLV 185
           D +E+ +  + +L    +  +EK    LL +D  D  +  +EV+AG GG E+  WA  ++
Sbjct: 203 D-SELESETLKALIDMRRVSKEKELEALLSADN-DPCSCYIEVQAGAGGTESNDWAAMVM 262

Query: 186 RMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKLKYESGVHRVQRVPQTET 245
            MY+ +++R  +  + +  +  E  G K   +++ G   Y   K E GVHR+ R+   ++
Sbjct: 263 EMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRISPFDS 322

Query: 246 QGRVHTSTATVAIMPEADE--VEVVIDPKDIELTTTRSGGAGGQNVNKVETAIDLFHKPT 305
             R HTS A VA++P   +    V I+  D+ +   RSGGAGGQ+ N  ++A+ + H PT
Sbjct: 323 GKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRIVHIPT 382

Query: 306 GIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKLQVGTGARAEKIRTYN 365
           GI   C  ER+Q  NK  A  +L+++L ++++  +Q  +  Q    +   +   +IRTY 
Sbjct: 383 GITATCQNERSQHSNKASAMAVLQSRLDQLEM-ARQTAMNAQHTQSLTEISWGNQIRTYV 442

Query: 366 YKDNRVTDHRLKMNFELT---SFIDGDIENAV 393
               R+    L+ N+E++   S ++GD++  +
Sbjct: 443 LHPYRMVKD-LRTNYEVSDPDSVLEGDLDGFI 467

[Close]

BLAST of CmoCh08G003950 vs. TAIR10
Match: AT3G57190.1 (AT3G57190.1 peptide chain release factor, putative)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08
Identity = 80/366 (21.86%), Postives = 164/366 (44.81%), Query Frame = 1


Query: 46  LVCMAEPYLITKLESAENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFK 105
           +V  AE +    LE  E  W +    +   D+  +P +  ++   +++  + V +    K
Sbjct: 57  VVLKAEMFAPDALELEEEQWIKQEETMRYFDLWDDPAKSDEILLKLADRAKAVDSL---K 116

Query: 106 ECEKQLQEAKALAKESGNDEDMAEMIALEISSLSSQLK---DIEEKL---KVMLLPSDPL 165
           + + + +EAK + +       + EM A++ S          D+   L   ++  L  D  
Sbjct: 117 DLKYKAEEAKLIIQ-------LGEMDAIDYSLFEQAYDSSLDVSRSLHHYEMSKLLRDQY 176

Query: 166 DARNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSER--NSWKFSPISSSEAEKGGFKTYVL 225
           DA    + +++G+ G ++ IW   +V MY K++ER   + + +   S  + K G  +  +
Sbjct: 177 DAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNARVAEKCSLLSNKSGVSSATI 236

Query: 226 EIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELT 285
           E +    Y  L  E GVHR+  +  T  +      +ATV I+P         + K+ +L 
Sbjct: 237 EFEFEFAYGYLLGERGVHRL-IISSTSNE----ECSATVDIIPLFLRASPDFEVKEGDLI 296

Query: 286 TTRSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVRE 345
            +       ++    E  + + H P+G+ +  + ER +  N+ +A   L+AKL  I    
Sbjct: 297 VSY---PAKEDHKIAENMVCIHHIPSGVTLQSSGERNRFANRIKALNRLKAKLLVI---A 356

Query: 346 QQERIRNQRKLQVGTGAR-AEKIRTYNYKDNR-VTDHRLKMN-FELTSFIDGDIENAVQA 401
           +++++ +  K+         E+ R+Y  K ++ V D +  +   +L S +DG+I   + A
Sbjct: 357 KEQKVSDVNKIDSKNILEPREETRSYVSKGHKMVVDRKTGLEILDLKSVLDGNIGPLLGA 401

[Close]

BLAST of CmoCh08G003950 vs. NCBI nr
Match: gi|659101471|ref|XP_008451621.1| (PREDICTED: peptide chain release factor 1-like, mitochondrial [Cucumis melo])

HSP 1 Score: 733.8 bits (1893), Expect = 1.7e-208
Identity = 375/416 (90.14%), Postives = 392/416 (94.23%), Query Frame = 1


Query: 1   MNFFSPTTATRTIPGCFLFPPRYGDFSRRCSLELKRSAPPFRASTLVCMAEPYLITKLES 60
           MN F+PTTA  TIP  FL PP +  F +RCSLELKR APP RASTL+CMAEPYLI KLES
Sbjct: 1   MNIFTPTTAAPTIPSSFLLPPPHSGFFKRCSLELKRFAPPSRASTLICMAEPYLIVKLES 60

Query: 61  AENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECEKQLQEAKALAKE 120
           AE TWKELSVKLADPD+VSNPTEYQKLAQSMSELDEVVSTFR+FKECE+QL+EAKAL+KE
Sbjct: 61  AEKTWKELSVKLADPDVVSNPTEYQKLAQSMSELDEVVSTFRKFKECERQLEEAKALSKE 120

Query: 121 SGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW 180
           SGNDEDM EMIALEISSLSS+LKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW
Sbjct: 121 SGNDEDMVEMIALEISSLSSELKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW 180

Query: 181 AGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKLKYESGVHRVQRV 240
           AGDLVRMYQKYSERNSWKFSP+SSSEAEKGG+KTYVLEIKG RVYSKLKYESGVHRVQRV
Sbjct: 181 AGDLVRMYQKYSERNSWKFSPVSSSEAEKGGYKTYVLEIKGQRVYSKLKYESGVHRVQRV 240

Query: 241 PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRSGGAGGQNVNKVETAIDLFH 300
           PQTETQGRVHTSTATVAIMPEADEVE+VIDPKDIELTT RSGGAGGQNVNKVETAIDLFH
Sbjct: 241 PQTETQGRVHTSTATVAIMPEADEVEIVIDPKDIELTTARSGGAGGQNVNKVETAIDLFH 300

Query: 301 KPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKLQVGTGARAEKIR 360
           KPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQE+IRNQRKLQVGTGARAEKIR
Sbjct: 301 KPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQEKIRNQRKLQVGTGARAEKIR 360

Query: 361 TYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQKELMEELVQSTGAPTT 417
           TYNYKDNRVTDHRLK NFELTSF+DGDIE+AVQAC AMEQKEL+EEL QS  A  T
Sbjct: 361 TYNYKDNRVTDHRLKTNFELTSFLDGDIEDAVQACTAMEQKELLEELAQSAVASAT 416

[Close]

BLAST of CmoCh08G003950 vs. NCBI nr
Match: gi|778727922|ref|XP_011659341.1| (PREDICTED: peptide chain release factor APG3, chloroplastic [Cucumis sativus])

HSP 1 Score: 723.0 bits (1865), Expect = 3.0e-205
Identity = 371/416 (89.18%), Postives = 389/416 (93.51%), Query Frame = 1


Query: 1   MNFFSPTTATRTIPGCFLFPPRYGDFSRRCSLELKRSAPPFRASTLVCMAEPYLITKLES 60
           M+ F+PTTA  TIP  FL PPR+    RRC+L+LKR APPFRASTL+CMAEPYLI KLES
Sbjct: 1   MSIFNPTTAAPTIPSTFLLPPRHSGLFRRCALQLKRFAPPFRASTLICMAEPYLIVKLES 60

Query: 61  AENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECEKQLQEAKALAKE 120
           AE TWKELSVKLADPDIVSNPTEYQKLAQS+SELDEVVSTFR+FKECEKQL+EAK L K+
Sbjct: 61  AEKTWKELSVKLADPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEKQLEEAKTLLKD 120

Query: 121 SGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW 180
           SGNDEDM EMIALEISSLSS+LKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW
Sbjct: 121 SGNDEDMVEMIALEISSLSSELKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW 180

Query: 181 AGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKLKYESGVHRVQRV 240
           AGDLVRMYQKYSERNSWKFSP+SSSEAEKGG+KTYVLEIKG RVYSKLKYESGVHRVQRV
Sbjct: 181 AGDLVRMYQKYSERNSWKFSPVSSSEAEKGGYKTYVLEIKGQRVYSKLKYESGVHRVQRV 240

Query: 241 PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRSGGAGGQNVNKVETAIDLFH 300
           PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELT  RSGGAGGQNVNKVETAIDLFH
Sbjct: 241 PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTIARSGGAGGQNVNKVETAIDLFH 300

Query: 301 KPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKLQVGTGARAEKIR 360
           KPTGIRIFCTEERTQLQNK RAFQLLRAKLYEIKVREQQE+IRNQRKLQVGTGARAEKIR
Sbjct: 301 KPTGIRIFCTEERTQLQNKLRAFQLLRAKLYEIKVREQQEKIRNQRKLQVGTGARAEKIR 360

Query: 361 TYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQKELMEELVQSTGAPTT 417
           TYNYKDNRVTDHRLK NFELTSF++GDIE+AVQACV MEQKEL+EEL QS  A  T
Sbjct: 361 TYNYKDNRVTDHRLKTNFELTSFLEGDIEDAVQACVTMEQKELLEELAQSAVASAT 416

[Close]

BLAST of CmoCh08G003950 vs. NCBI nr
Match: gi|700189664|gb|KGN44897.1| (hypothetical protein Csa_7G394660 [Cucumis sativus])

HSP 1 Score: 714.5 bits (1843), Expect = 1.1e-202
Identity = 369/416 (88.70%), Postives = 387/416 (93.03%), Query Frame = 1


Query: 1   MNFFSPTTATRTIPGCFLFPPRYGDFSRRCSLELKRSAPPFRASTLVCMAEPYLITKLES 60
           M+ F+PTTA  TIP  FL PPR+    RRC+L+LKR APPFRASTL+CMAEPYLI KLES
Sbjct: 1   MSIFNPTTAAPTIPSTFLLPPRHSGLFRRCALQLKRFAPPFRASTLICMAEPYLIVKLES 60

Query: 61  AENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECEKQLQEAKALAKE 120
           AE TWKELSVKLADPDIVSNPTEYQKLAQS+SELDEVVSTFR+FKECEKQL+E    AK+
Sbjct: 61  AEKTWKELSVKLADPDIVSNPTEYQKLAQSISELDEVVSTFRKFKECEKQLEE----AKD 120

Query: 121 SGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW 180
           SGNDEDM EMIALEISSLSS+LKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW
Sbjct: 121 SGNDEDMVEMIALEISSLSSELKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW 180

Query: 181 AGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKLKYESGVHRVQRV 240
           AGDLVRMYQKYSERNSWKFSP+SSSEAEKGG+KTYVLEIKG RVYSKLKYESGVHRVQRV
Sbjct: 181 AGDLVRMYQKYSERNSWKFSPVSSSEAEKGGYKTYVLEIKGQRVYSKLKYESGVHRVQRV 240

Query: 241 PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRSGGAGGQNVNKVETAIDLFH 300
           PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELT  RSGGAGGQNVNKVETAIDLFH
Sbjct: 241 PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTIARSGGAGGQNVNKVETAIDLFH 300

Query: 301 KPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKLQVGTGARAEKIR 360
           KPTGIRIFCTEERTQLQNK RAFQLLRAKLYEIKVREQQE+IRNQRKLQVGTGARAEKIR
Sbjct: 301 KPTGIRIFCTEERTQLQNKLRAFQLLRAKLYEIKVREQQEKIRNQRKLQVGTGARAEKIR 360

Query: 361 TYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQKELMEELVQSTGAPTT 417
           TYNYKDNRVTDHRLK NFELTSF++GDIE+AVQACV MEQKEL+EEL QS  A  T
Sbjct: 361 TYNYKDNRVTDHRLKTNFELTSFLEGDIEDAVQACVTMEQKELLEELAQSAVASAT 412

[Close]

BLAST of CmoCh08G003950 vs. NCBI nr
Match: gi|802688568|ref|XP_012082693.1| (PREDICTED: peptide chain release factor APG3, chloroplastic [Jatropha curcas])

HSP 1 Score: 652.9 bits (1683), Expect = 3.8e-184
Identity = 339/389 (87.15%), Postives = 362/389 (93.06%), Query Frame = 1


Query: 28  RRCSLELKRSAPPFRASTL--VCMAEPYLITKLESAENTWKELSVKLADPDIVSNPTEYQ 87
           RR SL L+   PP R   L  VCMAEPYLITKLESAE TWKELSVKLADPD+VSNP+EYQ
Sbjct: 27  RRSSLLLR---PPQRRRNLRIVCMAEPYLITKLESAEKTWKELSVKLADPDVVSNPSEYQ 86

Query: 88  KLAQSMSELDEVVSTFRRFKECEKQLQEAKALAKESGNDEDMAEMIALEISSLSSQLKDI 147
           KLAQS++ELDEVVST+RRFKECEKQL E KALAKE GNDEDMAEMIA EI SLS++LK++
Sbjct: 87  KLAQSVAELDEVVSTYRRFKECEKQLVETKALAKEEGNDEDMAEMIAYEIESLSNELKEL 146

Query: 148 EEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPISSS 207
           EEKLKV+LLPSDPLDARNIMLEVRAGTGGDEAGIWAGDL+R+YQ+YSERNSWK+S ISSS
Sbjct: 147 EEKLKVLLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLIRLYQRYSERNSWKYSLISSS 206

Query: 208 EAEKGGFKTYVLEIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEV 267
           EAEKGGFKT V+EIKGNRVYSKLKYESGVHRVQRVPQTE QGRVHTSTATVAIMPEADEV
Sbjct: 207 EAEKGGFKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV 266

Query: 268 EVVIDPKDIELTTTRSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKHRAFQL 327
           EVVIDPKDIELTT RSGGAGGQNVNKVETA+DLFHKPTGIRIFCTEERTQL+NK+RA QL
Sbjct: 267 EVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERTQLKNKNRALQL 326

Query: 328 LRAKLYEIKVREQQERIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFID 387
           LRAKLYE+KVREQQE IRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSF+D
Sbjct: 327 LRAKLYEMKVREQQESIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLD 386

Query: 388 GDIENAVQACVAMEQKELMEELVQSTGAP 415
           GDIENAVQAC AMEQKEL+EEL +S G P
Sbjct: 387 GDIENAVQACSAMEQKELLEELAESVGVP 412

[Close]

BLAST of CmoCh08G003950 vs. NCBI nr
Match: gi|747066108|ref|XP_011079725.1| (PREDICTED: peptide chain release factor APG3, chloroplastic isoform X2 [Sesamum indicum])

HSP 1 Score: 652.1 bits (1681), Expect = 6.4e-184
Identity = 338/416 (81.25%), Postives = 369/416 (88.70%), Query Frame = 1


Query: 1   MNFFSPTTATRTIPGCFLFPPRYGDFSRRCSLELKRSAPPFRASTLVCMAEPYLITKLES 60
           MN  + +  TR  P    FP R G FS R  L ++  A  +R+   VCMAEPYLITKLES
Sbjct: 1   MNSLTASFTTRFSPTAAHFPAR-GRFSGRSFL-IQPPARHWRSGRCVCMAEPYLITKLES 60

Query: 61  AENTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVSTFRRFKECEKQLQEAKALAKE 120
           AE TWKELSVKLADPD+VSNP+EYQKLAQS+SELDEVVSTFR FKECEKQL+E KALAKE
Sbjct: 61  AEKTWKELSVKLADPDVVSNPSEYQKLAQSLSELDEVVSTFRSFKECEKQLEETKALAKE 120

Query: 121 SGNDEDMAEMIALEISSLSSQLKDIEEKLKVMLLPSDPLDARNIMLEVRAGTGGDEAGIW 180
           +GNDEDM EMIA EI +L+ Q+ ++EE+LKV+LLPSDPLDARNIMLEVRAGTGGDEAG+W
Sbjct: 121 AGNDEDMVEMIASEIETLTKQINELEERLKVLLLPSDPLDARNIMLEVRAGTGGDEAGLW 180

Query: 181 AGDLVRMYQKYSERNSWKFSPISSSEAEKGGFKTYVLEIKGNRVYSKLKYESGVHRVQRV 240
           AGDLVRMYQKYSERNSWKF+P+SSSEAEKGGFKTYV+EIKG RVYSKLKYESGVHRVQRV
Sbjct: 181 AGDLVRMYQKYSERNSWKFTPLSSSEAEKGGFKTYVMEIKGKRVYSKLKYESGVHRVQRV 240

Query: 241 PQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTTRSGGAGGQNVNKVETAIDLFH 300
           P+TE QGRVHTSTATVAIMPEADEV+V IDPKDIELTT RSGGAGGQNVNKVETA+DLFH
Sbjct: 241 PRTEAQGRVHTSTATVAIMPEADEVDVEIDPKDIELTTARSGGAGGQNVNKVETAVDLFH 300

Query: 301 KPTGIRIFCTEERTQLQNKHRAFQLLRAKLYEIKVREQQERIRNQRKLQVGTGARAEKIR 360
           KPTGIRIFCTEERTQLQNK RA QLLRAKLYEIKVREQQE++RNQRK+QVGTGARAEKIR
Sbjct: 301 KPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKLRNQRKMQVGTGARAEKIR 360

Query: 361 TYNYKDNRVTDHRLKMNFELTSFIDGDIENAVQACVAMEQKELMEELVQSTGAPTT 417
           TYNYKDNRVTDHRLKMNFELTSF+DGDIE AVQ+C  MEQKEL+EEL  S GA  T
Sbjct: 361 TYNYKDNRVTDHRLKMNFELTSFLDGDIETAVQSCATMEQKELLEELAGSVGAMAT 414

The following BLAST results are available for this feature:

BLAST of CmoCh08G003950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
APG3_ARATH	7.3e-172	82.26	Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana GN=APG3...	[more]
RF1_TRIEI	2.4e-130	62.84	Peptide chain release factor 1 OS=Trichodesmium erythraeum (strain IMS101) GN=pr...	[more]
RF1_CYAP7	7.0e-130	63.81	Peptide chain release factor 1 OS=Cyanothece sp. (strain PCC 7424) GN=prfA PE=3 ...	[more]
RF1_THEEB	1.6e-129	63.79	Peptide chain release factor 1 OS=Thermosynechococcus elongatus (strain BP-1) GN...	[more]
RF1_MICAN	5.9e-129	62.95	Peptide chain release factor 1 OS=Microcystis aeruginosa (strain NIES-843) GN=pr...	[more]

BLAST of CmoCh08G003950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K944_CUCSA	7.3e-203	88.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394660 PE=4 SV=1	[more]
A0A067JW24_JATCU	2.6e-184	87.15	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13873 PE=3 SV=1	[more]
W9SBM3_9ROSA	2.2e-183	87.73	Peptide chain release factor 1 OS=Morus notabilis GN=L484_020489 PE=3 SV=1	[more]
D7TP29_VITVI	2.5e-182	85.94	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g01470 PE=3 SV=...	[more]
A0A061DQ78_THECC	1.5e-179	80.39	Peptide chain release factor 1 isoform 2 OS=Theobroma cacao GN=TCM_004560 PE=3 S...	[more]

BLAST of CmoCh08G003950 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62910.1	4.1e-173	82.26	Peptide chain release factor 1	[more]
AT2G47020.1	1.6e-60	40.34	Peptide chain release factor 1	[more]
AT5G36170.1	5.1e-38	31.90	high chlorophyll fluorescent 109	[more]
AT1G56350.1	7.4e-29	28.61	Peptide chain release factor 2	[more]
AT3G57190.1	1.4e-08	21.86	peptide chain release factor, putative	[more]

BLAST of CmoCh08G003950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101471\|ref\|XP_008451621.1\|	1.7e-208	90.14	PREDICTED: peptide chain release factor 1-like, mitochondrial [Cucumis melo]	[more]
gi\|778727922\|ref\|XP_011659341.1\|	3.0e-205	89.18	PREDICTED: peptide chain release factor APG3, chloroplastic [Cucumis sativus]	[more]
gi\|700189664\|gb\|KGN44897.1\|	1.1e-202	88.70	hypothetical protein Csa_7G394660 [Cucumis sativus]	[more]
gi\|802688568\|ref\|XP_012082693.1\|	3.8e-184	87.15	PREDICTED: peptide chain release factor APG3, chloroplastic [Jatropha curcas]	[more]
gi\|747066108\|ref\|XP_011079725.1\|	6.4e-184	81.25	PREDICTED: peptide chain release factor APG3, chloroplastic isoform X2 [Sesamum ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000352	Pep_chain_release_fac_I_II
IPR004373	PrfA
IPR005139	PCRF
IPR014720	dsRBD_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003747	translation release factor activity
GO:0016149	translation release factor activity, codon specific

Vocabulary: **Biological Process**
Term	Definition
GO:0006415	translational termination

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0006449	regulation of translational termination
biological_process	GO:0006415	translational termination
biological_process	GO:0042793	transcription from plastid promoter
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0032544	plastid translation
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0051083	'de novo' cotranslational protein folding
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
cellular_component	GO:0018444	translation release factor complex
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016149	translation release factor activity, codon specific
molecular_function	GO:0003747	translation release factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G003950.1	CmoCh08G003950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000352	Peptide chain release factor class I/class II	PFAM	PF00472	RF-1	coord: 264..373 score: 1.5
IPR000352	Peptide chain release factor class I/class II	PROSITE	PS00745	RF_PROK_I	coord: 280..296 scor
IPR004373	Peptide chain release factor 1	HAMAP	MF_00093	Rel_fac_1	coord: 54..408 score: 34
IPR004373	Peptide chain release factor 1	TIGRFAMs	TIGR00019	TIGR00019	coord: 50..408 score: 3.5E
IPR005139	Peptide chain release factor	PFAM	PF03462	PCRF	coord: 62..256 score: 5.3
IPR005139	Peptide chain release factor	SMART	SM00937	PCRF_a_2	coord: 116..231 score: 4.8
IPR014720	Double-stranded RNA-binding domain	GENE3D	G3DSA:3.30.160.20		coord: 263..341 score: 1.7
None	No IPR available	unknown	Coil	Coil	coord: 104..124 score: -coord: 128..148 score: -coord: 328..348 scor
None	No IPR available	GENE3D	G3DSA:1.20.58.410		coord: 55..146 score: 1.2
None	No IPR available	PANTHER	PTHR11075	PEPTIDE CHAIN RELEASE FACTOR	coord: 46..407 score: 4.6E
None	No IPR available	PANTHER	PTHR11075:SF9	PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATED	coord: 46..407 score: 4.6E
None	No IPR available	unknown	SSF75620	Release factor	coord: 63..404 score: 3.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G003950	Cucsa.025290	Cucumber (Gy14) v1	cgycmoB1029
CmoCh08G003950	CmaCh08G003990	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G003950	Cla014689	Watermelon (97103) v1	cmowmB843
CmoCh08G003950	Csa7G394660	Cucumber (Chinese Long) v2	cmocuB900
CmoCh08G003950	MELO3C016049	Melon (DHL92) v3.5.1	cmomeB815
CmoCh08G003950	ClCG09G006250	Watermelon (Charleston Gray)	cmowcgB785
CmoCh08G003950	CSPI07G17110	Wild cucumber (PI 183967)	cmocpiB913
CmoCh08G003950	Lsi02G023660	Bottle gourd (USVL1VR-Ls)	cmolsiB809
CmoCh08G003950	Cp4.1LG17g06860	Cucurbita pepo (Zucchini)	cmocpeB853
CmoCh08G003950	MELO3C016049.2	Melon (DHL92) v3.6.1	cmomedB920
CmoCh08G003950	CsaV3_7G028880	Cucumber (Chinese Long) v3	cmocucB1066
CmoCh08G003950	Cla97C09G168820	Watermelon (97103) v2	cmowmbB916
CmoCh08G003950	BhiUN245G42	Wax gourd	cmowgoB1103
CmoCh08G003950	CsGy7G015550	Cucumber (Gy14) v2	cgybcmoB955
CmoCh08G003950	Carg22156	Silver-seed gourd	carcmoB1161

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G003950	Wax gourd	cmowgoB1102
CmoCh08G003950	Cucurbita moschata (Rifu)	cmocmoB319
CmoCh08G003950	Cucurbita maxima (Rimu)	cmacmoB374
CmoCh08G003950	Cucurbita pepo (Zucchini)	cmocpeB839
CmoCh08G003950	Silver-seed gourd	carcmoB0157