CmoCh08G003910 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGTCTTGGTTCGTCTCGTCCCCAATGCCCTAGGTATCTCAGTTCCGTTTCTTCTTCCTTTGTTCTTCTGTTCGGGCTAGCCCTAGCTGTTGATGCACTGCGCTTCGTATTCGATTTTGACGGGAATTTGTTGATAGCCGAAGAAGGAAGCTTCGTGTGGGTCGTTAATTCAGTTAATCTTGGAGGAGAAGATAGTTGTCGAGGTAAAGTTTGGCTTCTGAATCCATTATGTGATTTGTTTCTAATTACAGTCTCCCAATCCCTGGCGTCTCTATCTCAAAACAGAGGGAAATTTGAATTTTTATTTTCATGTTTTGGTACTTTGGTTGGCTGTTGGCAATGTTAGTGGAAATTGACGAAATGAGTTTTGCCTCTAGTGTTTGGAGTCGGTTCTTGATCGTGGTTGTAGTTTTACGGCATGTTAGAAAGGTATGATAAGACATTCTTTAGATCATGATGCCGCTGGTTTGAGAAATTGATTGGTTGTTGTTTTATTTCATTAGATTGTTCATTGAAGGACATATTGTGCTCTTTTTAAGCATCTGACTGACTAACTTGCCCCTATCTCGACAATCTCAAAAGAACGAACTCCACTCGTGGGATTTTAGCTTAATCCATTCTCCTGAAGTCTCTTTACCTGTACTTAGATTTCATAAATCCTTATTGAAAGTCTAAAGACGTTTGACGTTGGAATCCATGAATCTTTGTTCCTAGTGTCTCGTTATCTTCTGGTTCCAGAACATTTTCTTGGCTTCAATTATATTTGTTCGTATGGAAGTAATTTAAGGCTTTGCTGAAGATTTTCGCTCAAAATAATATGGGAAGGGGCGAGTGAGAGTGGTTATTCATTTTGTTAAGTGGGTGTGAGTTTCTAGAATGTGTGAGGGGAGGGGATTTGAGATTGGCAATTAAAGTCAGCCCTTAAAGGATGTGGCTCTCATGGTGTATCGTCTTATTATTGTATTTCTAAAGAATATAACGTTTGGGTAAAATCATGTATATGTTAGATAGACATAAAATGCCTCAAACTATACTAGAGAGAGTTGTGCCTAGTTATCAATTCTTCCTACCTGGAGTTATATGCTATCTAAACCGTTGTGTTGCCTTTTTTGCTTGCTAACCTATAACAGCTCCTGTAGGCTATACCTGTAGGAACTAGGGAATGGTTGTAACTTCAGCGCACTATAATTTCAATTTGAAACAGTTTCTAATTGGTACTTCTCCAATTTTCTTTGTGAGCAATGTTGAGGGAAATATTCATAACATCAAATGAGCGGTTCATCAATTGTTAATTCTTAATCGGCCCTGCTTCCCACAAGTTTTTAGTTCTTAATTACATTACGAAAAAAATCCATCAACAATTTCCCCCCATACAAGGCATCAATTTCCACATTTATGAGTACTAATAACATTAAATTCATGCTGATAAATTGTGAGGAGAATTCACTTGTTGAAGTAATATTTTTTAGACTAATCAGCTCTTTAACTAGAGAAGTTGAATTGAAGCTTTTGATGAGTTACGTATTCTGTTTCTGGCTTTTATATCAGGAATATGGAGGACGCATCATCTGAAACTATCACAGATAAAGTATCTCAAGAGAATCATGAAACTCGTGATGAAATGCTTTCTAGGCACAGGTAAATAGAAATTTGACTCTTGGCTTCTTTTCTATCATTTTTTTTCCTCAGTTTCGAGTATAGCCTGTTGTTTCAATGTTTGCTGCCACTGGTGTTTAATGTAATCGAATTAGAAAAATATGTATATTTTTGTTTGTTTTCACCCCACAAAGAGTTGGTTACTTGATATATAGATTCAGCTTGATTTTCATGAAGTTTTAAAATGTTCATTAGAACTTTAAGACATTAGTCATCTAGGGGGGCAATGTATTAAAAACATTTCAAGATCCGGTTCCTCAAATCGATTCTTGTAATCTTACAAATACTAGATTTTTGTGCCATTTCAACTTCAGATGCTTAAAATATGCATATTTTTCCATGTTCAATCACTTCCGAATGAAAGCTTTTAGTATAATCCATATAATTACTACAATATAAGCGTGTGTACTTACTGATGCCTTTGGTACAATTGGTGGTATTATTTACTTTTGTGGTTTACCACCGCGACTTCAATCGAATGGGGAGGGTATCATTAACGTTTTGTGTCTGTATTGCTTGTTGAATTACTGTATCTGCATGCAGGAAAGAGATATCACAGTTGCAGAATAAAGAAATGGAACTTAAAAAGGCCGCTGCTAGAGGTAGCAAAGCTGAACAAAAAATGAAGAAAAAACAGGTGGAGGAAGAGATATCTCAACTTTCTGCGAATCTAAAAAAGAAACATAATGAAGAACTTGCGTTCTTAGGCTATAGTAGCAGTAATGGAAACGAACGAAGCAATCTCGACAACCTAGTGAAGGCCGTGGCTGGCGTGTCGAGGACAGCTCAATCCGACCATTCAAAGCCAAGCAAAAGCACAAAACGGAGGGAGAAGAGGGCTCAACAAGAAGCAGCAAGAGACAGAAGAATTGAAGAGGAGCAGAGTAACATTGTGAGTGATAGAATGATCGAGAATGAACAATTGGAAAAGAAGCTTGGACCTCTTGGTTTGACTGTTAATGAAATCAAGCCAGATGGGCATTGCCTCTACAGAGCAGTCGAAAACCAGATGGACTTCCTTTCAGGAGGTTCATCACCATACAATTACCAAGAACTTCGTCAAATGGTAGCAGCTTACATGAGAGACCATTCAACCGATTACATGCCATTTTTCCTCTCGGAAAACGTCGTAGAAGGTAATTCAAACGAATCGCTGTCCGAAAGGTTTGAAAATTACTGCAAGGAAGTTGAATCCACAGCGGCATGGGGAGGGCAGCTGGAACTTGGTGCTTTAACCCATTGCCTTAAAAAACATATCATGATATTTTCAGGATCCTTCCCTGATGTGGAAATGGGAAAGGAGTACAAATCAGACGGCGTACTAAACTCAAGTATTAGGCTGTCATACCATAAGCATGCCTTTGGACTTGGGGAGCACTACAATTCTGTGGTTCCTGTATGACCAATGGGGCGTATCATGTCGCTCATGAAGGGCCACTTTGGCTAAAAAGAACGTTCTTTTTGTTTCCTTCCATAGATATTTAGCGTTCCTCACATTTCTTCAATTAGCTTAAAGCAAGTTATTTTAGTTACAACTATTCCATGTGCTATATTTTGTTGTTTTTTATTGGGCCACTTTTCTCTTTTTGTATGGTATGTTTTAGCTTTTTACGTATTGTTGTCAGTCTCATGATTTTAAAATGCATCTATTAAGGAGAAGTTTTCACACCCTTATAAGGAATGTATTAAAATGCATCTATTAGGGAGAAGTTTCCACACCCTTATAAGGAATGTATTAAAATGCA TTTGTCTTGGTTCGTCTCGTCCCCAATGCCCTAGGTATCTCAGTTCCGTTTCTTCTTCCTTTGTTCTTCTGTTCGGGCTAGCCCTAGCTGTTGATGCACTGCGCTTCGTATTCGATTTTGACGGGAATTTGTTGATAGCCGAAGAAGGAAGCTTCGTGTGGGTCGTTAATTCAGTTAATCTTGGAGGAGAAGATAGTTGTCGAGTGTTTGGAGTCGGTTCTTGATCGTGGTTGTAGTTTTACGGCATGTTAGAAAGGAATATGGAGGACGCATCATCTGAAACTATCACAGATAAAGTATCTCAAGAGAATCATGAAACTCGTGATGAAATGCTTTCTAGGCACAGGAAAGAGATATCACAGTTGCAGAATAAAGAAATGGAACTTAAAAAGGCCGCTGCTAGAGGTAGCAAAGCTGAACAAAAAATGAAGAAAAAACAGGTGGAGGAAGAGATATCTCAACTTTCTGCGAATCTAAAAAAGAAACATAATGAAGAACTTGCGTTCTTAGGCTATAGTAGCAGTAATGGAAACGAACGAAGCAATCTCGACAACCTAGTGAAGGCCGTGGCTGGCGTGTCGAGGACAGCTCAATCCGACCATTCAAAGCCAAGCAAAAGCACAAAACGGAGGGAGAAGAGGGCTCAACAAGAAGCAGCAAGAGACAGAAGAATTGAAGAGGAGCAGAGTAACATTGTGAGTGATAGAATGATCGAGAATGAACAATTGGAAAAGAAGCTTGGACCTCTTGGTTTGACTGTTAATGAAATCAAGCCAGATGGGCATTGCCTCTACAGAGCAGTCGAAAACCAGATGGACTTCCTTTCAGGAGGTTCATCACCATACAATTACCAAGAACTTCGTCAAATGGTAGCAGCTTACATGAGAGACCATTCAACCGATTACATGCCATTTTTCCTCTCGGAAAACGTCGTAGAAGGTAATTCAAACGAATCGCTGTCCGAAAGGTTTGAAAATTACTGCAAGGAAGTTGAATCCACAGCGGCATGGGGAGGGCAGCTGGAACTTGGTGCTTTAACCCATTGCCTTAAAAAACATATCATGATATTTTCAGGATCCTTCCCTGATGTGGAAATGGGAAAGGAGTACAAATCAGACGGCGTACTAAACTCAAGTATTAGGCTGTCATACCATAAGCATGCCTTTGGACTTGGGGAGCACTACAATTCTGTGGTTCCTGTATGACCAATGGGGCGTATCATGTCGCTCATGAAGGGCCACTTTGGCTAAAAAGAACGTTCTTTTTGTTTCCTTCCATAGATATTTAGCGTTCCTCACATTTCTTCAATTAGCTTAAAGCAAGTTATTTTAGTTACAACTATTCCATGTGCTATATTTTGTTGTTTTTTATTGGGCCACTTTTCTCTTTTTGTATGGTATGTTTTAGCTTTTTACGTATTGTTGTCAGTCTCATGATTTTAAAATGCATCTATTAAGGAGAAGTTTTCACACCCTTATAAGGAATGTATTAAAATGCATCTATTAGGGAGAAGTTTCCACACCCTTATAAGGAATGTATTAAAATGCA ATGTTAGAAAGGAATATGGAGGACGCATCATCTGAAACTATCACAGATAAAGTATCTCAAGAGAATCATGAAACTCGTGATGAAATGCTTTCTAGGCACAGGAAAGAGATATCACAGTTGCAGAATAAAGAAATGGAACTTAAAAAGGCCGCTGCTAGAGGTAGCAAAGCTGAACAAAAAATGAAGAAAAAACAGGTGGAGGAAGAGATATCTCAACTTTCTGCGAATCTAAAAAAGAAACATAATGAAGAACTTGCGTTCTTAGGCTATAGTAGCAGTAATGGAAACGAACGAAGCAATCTCGACAACCTAGTGAAGGCCGTGGCTGGCGTGTCGAGGACAGCTCAATCCGACCATTCAAAGCCAAGCAAAAGCACAAAACGGAGGGAGAAGAGGGCTCAACAAGAAGCAGCAAGAGACAGAAGAATTGAAGAGGAGCAGAGTAACATTGTGAGTGATAGAATGATCGAGAATGAACAATTGGAAAAGAAGCTTGGACCTCTTGGTTTGACTGTTAATGAAATCAAGCCAGATGGGCATTGCCTCTACAGAGCAGTCGAAAACCAGATGGACTTCCTTTCAGGAGGTTCATCACCATACAATTACCAAGAACTTCGTCAAATGGTAGCAGCTTACATGAGAGACCATTCAACCGATTACATGCCATTTTTCCTCTCGGAAAACGTCGTAGAAGGTAATTCAAACGAATCGCTGTCCGAAAGGTTTGAAAATTACTGCAAGGAAGTTGAATCCACAGCGGCATGGGGAGGGCAGCTGGAACTTGGTGCTTTAACCCATTGCCTTAAAAAACATATCATGATATTTTCAGGATCCTTCCCTGATGTGGAAATGGGAAAGGAGTACAAATCAGACGGCGTACTAAACTCAAGTATTAGGCTGTCATACCATAAGCATGCCTTTGGACTTGGGGAGCACTACAATTCTGTGGTTCCTGTATGA
BLAST of CmoCh08G003910 vs. Swiss-Prot
Match: OTU6B_DANRE (OTU domain-containing protein 6B OS=Danio rerio GN=otud6b PE=2 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 7.4e-39 Identity = 118/304 (38.82%), Postives = 164/304 (53.95%), Query Frame = 1
BLAST of CmoCh08G003910 vs. Swiss-Prot
Match: OTU6B_CHICK (OTU domain-containing protein 6B OS=Gallus gallus GN=OTUD6B PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.8e-38 Identity = 107/293 (36.52%), Postives = 162/293 (55.29%), Query Frame = 1
BLAST of CmoCh08G003910 vs. Swiss-Prot
Match: OTU6B_XENTR (OTU domain-containing protein 6B OS=Xenopus tropicalis GN=otud6b PE=2 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 5.9e-36 Identity = 104/297 (35.02%), Postives = 159/297 (53.54%), Query Frame = 1
BLAST of CmoCh08G003910 vs. Swiss-Prot
Match: OTU6B_HUMAN (OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.0e-35 Identity = 107/305 (35.08%), Postives = 164/305 (53.77%), Query Frame = 1
BLAST of CmoCh08G003910 vs. Swiss-Prot
Match: OTU6B_XENLA (OTU domain-containing protein 6B OS=Xenopus laevis GN=otud6b PE=2 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 7.2e-34 Identity = 105/301 (34.88%), Postives = 166/301 (55.15%), Query Frame = 1
BLAST of CmoCh08G003910 vs. TrEMBL
Match: A0A0A0KAR3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394600 PE=4 SV=1) HSP 1 Score: 526.9 bits (1356), Expect = 1.7e-146 Identity = 275/313 (87.86%), Postives = 295/313 (94.25%), Query Frame = 1
BLAST of CmoCh08G003910 vs. TrEMBL
Match: M5VL87_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008753mg PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 2.0e-128 Identity = 245/320 (76.56%), Postives = 288/320 (90.00%), Query Frame = 1
BLAST of CmoCh08G003910 vs. TrEMBL
Match: M5X320_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008763mg PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 2.7e-128 Identity = 246/320 (76.88%), Postives = 286/320 (89.38%), Query Frame = 1
BLAST of CmoCh08G003910 vs. TrEMBL
Match: A0A0D2RZ80_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G141000 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 1.2e-125 Identity = 238/303 (78.55%), Postives = 271/303 (89.44%), Query Frame = 1
BLAST of CmoCh08G003910 vs. TrEMBL
Match: A0A067HHD4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019658mg PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 1.2e-125 Identity = 240/318 (75.47%), Postives = 280/318 (88.05%), Query Frame = 1
BLAST of CmoCh08G003910 vs. TAIR10
Match: AT3G62940.2 (AT3G62940.2 Cysteine proteinases superfamily protein) HSP 1 Score: 395.2 bits (1014), Expect = 3.8e-110 Identity = 214/320 (66.88%), Postives = 260/320 (81.25%), Query Frame = 1
BLAST of CmoCh08G003910 vs. NCBI nr
Match: gi|659101483|ref|XP_008451627.1| (PREDICTED: OTU domain-containing protein 6B [Cucumis melo]) HSP 1 Score: 533.5 bits (1373), Expect = 2.5e-148 Identity = 277/314 (88.22%), Postives = 298/314 (94.90%), Query Frame = 1
BLAST of CmoCh08G003910 vs. NCBI nr
Match: gi|778727902|ref|XP_011659337.1| (PREDICTED: OTU domain-containing protein 6B [Cucumis sativus]) HSP 1 Score: 526.9 bits (1356), Expect = 2.4e-146 Identity = 275/313 (87.86%), Postives = 295/313 (94.25%), Query Frame = 1
BLAST of CmoCh08G003910 vs. NCBI nr
Match: gi|645258688|ref|XP_008235001.1| (PREDICTED: OTU domain-containing protein 6B [Prunus mume]) HSP 1 Score: 468.4 bits (1204), Expect = 1.0e-128 Identity = 247/320 (77.19%), Postives = 287/320 (89.69%), Query Frame = 1
BLAST of CmoCh08G003910 vs. NCBI nr
Match: gi|595793357|ref|XP_007200427.1| (hypothetical protein PRUPE_ppa008753mg [Prunus persica]) HSP 1 Score: 466.8 bits (1200), Expect = 2.9e-128 Identity = 245/320 (76.56%), Postives = 288/320 (90.00%), Query Frame = 1
BLAST of CmoCh08G003910 vs. NCBI nr
Match: gi|596012999|ref|XP_007218692.1| (hypothetical protein PRUPE_ppa008763mg [Prunus persica]) HSP 1 Score: 466.5 bits (1199), Expect = 3.8e-128 Identity = 246/320 (76.88%), Postives = 286/320 (89.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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