CmoCh08G003440 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAAGAAAATGGTCTCTCTCCGATTTCCATTCTCGTTTCCTCAGCCGCCAAAGCTTCCACGCCATGGCTTTCTCCGCCCCTCCTACGCCGTCGTCGCGGCCGGCGGCGCTGCGGCAGCAGCCGGATTCGTCGCTGTAACTATAAACTCGACGAACCAACAATCCCCATTTCTCGAAAGTGCATTAAATTCGCTCTTCCGAAGTCATTCATCGCCCCTATGGGCTTCTCTATCTCTGGCGGACAATTCAACCACCTCTTCAGTTGTTGACTCCAAAACTGGAATGTCATTTCCGTCAGTAATCGGAGACTCTCAGCAGCTTCTCGGAATTGGGTTGCGGAGAAAGGCGATTTTGGGAGTGAAGAATATCAATGTGTATGCATATGGTATGTTAATCATTCCACATTTCCACTTTTAAGCGAGCTTTATAAATTTTGATTGAATGTTGAATTTATGCTGATTGAATGAAGAGATCGACATTTGTGAATCGTATTGGATTTTCAGTATCAGGAAGATTGTAAATAGTATTGATTAGTAATGATCTAGGGCTTTGGGAGACTGTTAAGATCTGTTCTTAATAATGGCACTGGATGGCCCATCCAAAGTTTGATGTTATTTCCCACTTGAAGTCATGATTTGAATTTGAAAGTTGTGTAGCATCTTCAATAATTCTCAAGAAAAGATCAAACAAAGCGAAGAACAAAAGAAAACAGATAGAATGTTTCAAAAAAGGAAACAAAAGTGAGTGGAACATGATAAGTTCCAGTTCAATCAGATCATCTTCTTGATGACTATGATGATAAGCTGTAGATTGATTGCTTCTAACTCAAGGGGAGTCATTTGTGCTTCCAATTGATATCAGAAATGAACTCAGCCTAGACTTCAAGTTTATGCTAACCTTCACTTTTAATGAATTATAGCATTCTCAACATCTTATACTTCTAGCTCTGCCCCAAATCTACCCAGGAGTTCGTTCATTTTAAGACATAGTTTGGCAAAAACAATGGAATGAACTTCCATTGGGTTGAAGATGGAAATAGTGGGTGGTTGAGATTCGCCCTAGTTCATGAGTTACAATCTTTGTTAAAAAGATAAACTCTGCTAGCAGATATTGTCCTCTTTAAGCTTTCCCTTTCGAACTTCCCCTCAAGGTTTTTAGAACGCGTCTACTAAGGAGAAGTTTTCATACACTTATAAAGAATGTTTCGTTCCTCTTTCCAACCGATGTGGGATCTCACAATTCATCCCCCTTTGGGGCCCGGCGTCCTCGCTGGCACACCACCCGATGTCTGGCTCTGACACCATTTGTAATGGCTCAAGCCCACCGCTAACAAATATTGTCCTCTTTGGGCTTTCTCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGTGTCCACCAGGGAGAGGTTTCCACACTCTTATAAAGAATGTTTTGTTCCCCTCTCCAACCAATATGGGATCTCACAATCCACCCGCCTTCAGCGCCCAGCGTCCTCGCTGGCACACCGCTCGGTGTCCGGTTCTGACACCATTTGTAATGATTCAAGCTCACCACTAACAAATATTGTCCTCTTTAGGCTTTCCCTTTCGGGCTTTCCCTCTAGGTTTTTAAAACGCGTGTAATAGGGAGAGGTTTCCACACCTTCATAAAGAATGCTTCGTTCTCTTCCCCAACTGATGTAGAATCTCACGGTTATATTTTGAAATCCGAGATGGAAGGGTCAATATGTTTTCTATCTTTGTGATATTGAAAATGTTTCCATGTTAAGCTACTCAAATGATTGGGTGTAGGTGTTTATGCCGATAACAATGACATAAAAGAATCATTGAGTGAGAAGTATGGAAAACTCAGTGTCTCTGAACTACAAGAAAAGAACTTTGATAAAGATATCATGGAAGCTGATATATGCATGACTGTTAGACTTCAAATAGTCTACGGAAGACTGAGCATCCGATCCGTTCGAAGTGCTTTTGAAGAATCGGTTGGAAGTCGACTCGAGAAGTTCGGGGGTTCAGACAACAAAGAATTGCTTCACAAGTGAGTCATGATCTTAGTGTAATATATGTAAAAGGCACACACTGTATACCCTACTCTTGATCCTTAAACCGTGCTTCTTTGCAGATTCACTTCCCAATTCAAAGACGAGTACAAAATACCTCGAGGGTCCGTGATCGATCTCTCCAAAGAACGAGGCCATGTCCTCCGCACAATCAGTGAGATTTCGATTCTTATTATTGCAATGATGAATTGTTCTATACATTATTTGTGGTGAAAGAGAAGGTAGTGGAGAAAGGAATAGAGGCTTCTAAACGGTAAATTACATCCCACGAAGAATTACTTGAAAGGAGTAGTCCCACATTGACTAATTAAGAGGATGATCATGAGTTTATATGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCCTTTATAAGGGTGTGGAAACCTTCCCGGTGGATTTGGTGGCGGTCCCACATCAATTAAAGAAAGGAGGGCCGGCGAGGACGCTGGGCCCAGAAGGAGGGTGGATTGTGATGTCTCAAATTGGTTGGGGAGGAGAACAAACCACTCTTTATACGGGTGTGGAAACCTTCCTCTAGCAGACGCGTTTTAAAGCCTTGAGAGGAAGCCCGAAAGGGAAAGCCCGAAAGGGAAAGCCCAAAGAGGGCAATATCTGCTAGCGGTAGATCTGGGTCCTTACACTGTAAGCAAGGAATACATCTCCATTGGTACGAGGTCTTTTGGGTAAACCAAAATCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTATAGAGGGTCGTGATTCCTAACGTTACTTTATCCGCATGTCTTTGGTTTGTTAAAAACATGTCTGAATGCATCGGCTAACCAACTGATGAACACTTAGCTCGCTTGATTAAGAGATCGGAGGCCTGAATGACTCGAACGGATTAAAGAATAAAATATTTTTATTATGATTTTGTGCATTTATGTTTAAAATTTTTGCAGTTGATGGGAAGGAAGTGGGAAGCATAGAGAGCCAACTACTGTGCAGAGCCATTTTAGATCTGTATATTGGTGAAGATCCATTTGATAAACAAGCCAAACAAGACATCAAACAAGCTTTAACTTCTATTCTTCACAACTAATATATATATATATATATATATATATATATATATGATGTTTACATTGGAG CAAAAAGAAAATGGTCTCTCTCCGATTTCCATTCTCGTTTCCTCAGCCGCCAAAGCTTCCACGCCATGGCTTTCTCCGCCCCTCCTACGCCGTCGTCGCGGCCGGCGGCGCTGCGGCAGCAGCCGGATTCGTCGCTGTAACTATAAACTCGACGAACCAACAATCCCCATTTCTCGAAAGTGCATTAAATTCGCTCTTCCGAAGTCATTCATCGCCCCTATGGGCTTCTCTATCTCTGGCGGACAATTCAACCACCTCTTCAGTTGTTGACTCCAAAACTGGAATGTCATTTCCGTCAGTAATCGGAGACTCTCAGCAGCTTCTCGGAATTGGGTTGCGGAGAAAGGCGATTTTGGGAGTGAAGAATATCAATGTGTATGCATATGGTGTTTATGCCGATAACAATGACATAAAAGAATCATTGAGTGAGAAGTATGGAAAACTCAGTGTCTCTGAACTACAAGAAAAGAACTTTGATAAAGATATCATGGAAGCTGATATATGCATGACTGTTAGACTTCAAATAGTCTACGGAAGACTGAGCATCCGATCCGTTCGAAGTGCTTTTGAAGAATCGGTTGGAAGTCGACTCGAGAAGTTCGGGGGTTCAGACAACAAAGAATTGCTTCACAAATTCACTTCCCAATTCAAAGACGAGTACAAAATACCTCGAGGGTCCGTGATCGATCTCTCCAAAGAACGAGGCCATGTCCTCCGCACAATCATTGATGGGAAGGAAGTGGGAAGCATAGAGAGCCAACTACTGTGCAGAGCCATTTTAGATCTGTATATTGGTGAAGATCCATTTGATAAACAAGCCAAACAAGACATCAAACAAGCTTTAACTTCTATTCTTCACAACTAATATATATATATATATATATATATATATATATATGATGTTTACATTGGAG ATGGTCTCTCTCCGATTTCCATTCTCGTTTCCTCAGCCGCCAAAGCTTCCACGCCATGGCTTTCTCCGCCCCTCCTACGCCGTCGTCGCGGCCGGCGGCGCTGCGGCAGCAGCCGGATTCGTCGCTGTAACTATAAACTCGACGAACCAACAATCCCCATTTCTCGAAAGTGCATTAAATTCGCTCTTCCGAAGTCATTCATCGCCCCTATGGGCTTCTCTATCTCTGGCGGACAATTCAACCACCTCTTCAGTTGTTGACTCCAAAACTGGAATGTCATTTCCGTCAGTAATCGGAGACTCTCAGCAGCTTCTCGGAATTGGGTTGCGGAGAAAGGCGATTTTGGGAGTGAAGAATATCAATGTGTATGCATATGGTGTTTATGCCGATAACAATGACATAAAAGAATCATTGAGTGAGAAGTATGGAAAACTCAGTGTCTCTGAACTACAAGAAAAGAACTTTGATAAAGATATCATGGAAGCTGATATATGCATGACTGTTAGACTTCAAATAGTCTACGGAAGACTGAGCATCCGATCCGTTCGAAGTGCTTTTGAAGAATCGGTTGGAAGTCGACTCGAGAAGTTCGGGGGTTCAGACAACAAAGAATTGCTTCACAAATTCACTTCCCAATTCAAAGACGAGTACAAAATACCTCGAGGGTCCGTGATCGATCTCTCCAAAGAACGAGGCCATGTCCTCCGCACAATCATTGATGGGAAGGAAGTGGGAAGCATAGAGAGCCAACTACTGTGCAGAGCCATTTTAGATCTGTATATTGGTGAAGATCCATTTGATAAACAAGCCAAACAAGACATCAAACAAGCTTTAACTTCTATTCTTCACAACTAA
BLAST of CmoCh08G003440 vs. Swiss-Prot
Match: FAP1_ARATH (Fatty-acid-binding protein 1 OS=Arabidopsis thaliana GN=FAP1 PE=1 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 2.2e-79 Identity = 165/284 (58.10%), Postives = 208/284 (73.24%), Query Frame = 1
BLAST of CmoCh08G003440 vs. Swiss-Prot
Match: FAP2_ARATH (Fatty-acid-binding protein 2 OS=Arabidopsis thaliana GN=FAP2 PE=2 SV=2) HSP 1 Score: 119.8 bits (299), Expect = 4.9e-26 Identity = 79/266 (29.70%), Postives = 135/266 (50.75%), Query Frame = 1
BLAST of CmoCh08G003440 vs. TrEMBL
Match: A0A0A0KAH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388440 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 1.2e-132 Identity = 249/283 (87.99%), Postives = 265/283 (93.64%), Query Frame = 1
BLAST of CmoCh08G003440 vs. TrEMBL
Match: M5VXN6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009406mg PE=4 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 5.0e-102 Identity = 204/295 (69.15%), Postives = 234/295 (79.32%), Query Frame = 1
BLAST of CmoCh08G003440 vs. TrEMBL
Match: F6HI42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g01060 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 5.7e-98 Identity = 198/288 (68.75%), Postives = 236/288 (81.94%), Query Frame = 1
BLAST of CmoCh08G003440 vs. TrEMBL
Match: A0A067FZ64_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023433mg PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 8.2e-97 Identity = 190/283 (67.14%), Postives = 238/283 (84.10%), Query Frame = 1
BLAST of CmoCh08G003440 vs. TrEMBL
Match: V4TAG8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021543mg PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 8.2e-97 Identity = 190/283 (67.14%), Postives = 238/283 (84.10%), Query Frame = 1
BLAST of CmoCh08G003440 vs. TAIR10
Match: AT3G63170.1 (AT3G63170.1 Chalcone-flavanone isomerase family protein) HSP 1 Score: 297.0 bits (759), Expect = 1.3e-80 Identity = 165/284 (58.10%), Postives = 208/284 (73.24%), Query Frame = 1
BLAST of CmoCh08G003440 vs. TAIR10
Match: AT2G26310.1 (AT2G26310.1 Chalcone-flavanone isomerase family protein) HSP 1 Score: 119.8 bits (299), Expect = 2.8e-27 Identity = 79/266 (29.70%), Postives = 135/266 (50.75%), Query Frame = 1
BLAST of CmoCh08G003440 vs. NCBI nr
Match: gi|659100952|ref|XP_008451353.1| (PREDICTED: fatty-acid-binding protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 486.1 bits (1250), Expect = 4.2e-134 Identity = 252/283 (89.05%), Postives = 266/283 (93.99%), Query Frame = 1
BLAST of CmoCh08G003440 vs. NCBI nr
Match: gi|449458494|ref|XP_004146982.1| (PREDICTED: fatty-acid-binding protein 1 [Cucumis sativus]) HSP 1 Score: 480.7 bits (1236), Expect = 1.7e-132 Identity = 249/283 (87.99%), Postives = 265/283 (93.64%), Query Frame = 1
BLAST of CmoCh08G003440 vs. NCBI nr
Match: gi|659100954|ref|XP_008451354.1| (PREDICTED: fatty-acid-binding protein 1 isoform X2 [Cucumis melo]) HSP 1 Score: 404.8 bits (1039), Expect = 1.2e-109 Identity = 213/246 (86.59%), Postives = 225/246 (91.46%), Query Frame = 1
BLAST of CmoCh08G003440 vs. NCBI nr
Match: gi|595793541|ref|XP_007200519.1| (hypothetical protein PRUPE_ppa009406mg [Prunus persica]) HSP 1 Score: 379.0 bits (972), Expect = 7.2e-102 Identity = 204/295 (69.15%), Postives = 234/295 (79.32%), Query Frame = 1
BLAST of CmoCh08G003440 vs. NCBI nr
Match: gi|645259292|ref|XP_008235293.1| (PREDICTED: fatty-acid-binding protein 1 [Prunus mume]) HSP 1 Score: 375.6 bits (963), Expect = 7.9e-101 Identity = 203/295 (68.81%), Postives = 234/295 (79.32%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|