CmoCh08G003080 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCCCGGAGGCTTGCCATTCTCTGTTCGCATCTCCGTCCAATTAACTCGGGACGTAGTCGAGCAACTCCCTCACATCTTTCCTCTTCGAACTGTGCTTCAGTAGCCAAGAGTGAGCAGCAGCTAATTTATGATCCTCACAAGGGGAGTCTACAAGATGGTTGTGTTTTCTGCAGGATTATACTCGGCGAGGAACCCGCTTTTAAGGTACTAATTATTTTGTTCATTTACAATTTTCGTGTCATCGTTTAAGGTTTGCTTTGTGAGATATATGGGATATTTGAAACCAACATTAAGAGATGACATTTTAACTTGCAGCTCTATGAAGATGATAGTTGCCTTTGTATATTAGATACAAGACCATTGAGTAATGGGTAAGGTATCATTCCTCCAAGATGCAGTACATATGTATATAGTTCTTATGTTTAGCTTAGACTCATTTTGTCTGATGATGTATCTGCGTGATACCATTGAATATGACTTAAAGCTTCTATGCAATGATGTTAGCTGCCTACCACTTTTATCTCGGGTAAGATTATTCATTGTTGCATGTCACTAGGTAGCTAACATCATTGCATTTATGTGATATCCCACATTGGTTGAAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAACACATTTTAAAATCGTGGGGCTAGCGGTGATATTATCGGGTCAAAGCGGACAATATCTACTACGGTGGACTTGGGTTGTTACCGTTGATATTAAAGTTAGACATTGGGCGGTGTGCTAGCGAGGACGTTGGGCCCCAAGGGGGTGGATTGTGAGATCCCACATTTGTTGGAGAGGGGACGAAGCATTCTTTATAAGGGTGTGGGAACCTCTCCCTAGTAGATACGTTTTAAAACTATGAGGCTGACGACGATACGTAAGGGGCCAAAGCGGACAATATCTATTAGTAGTGGGTTTGGGTTGTTATAGTTGGTATTAGAGCTAGACACCGGGCAGTGTGTTAGCGAGGACGTTGGGCCCCAAGGGGAGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGGGGACGAAGCATTCCTTATATGGGTGTGAAAACCTCTCCCTAGCATACGCGTTTTAAAACCGTGAGGCTGACGATGATACGTAACGGGCCAAAGCGGACAATATCTACTAGCGGTGGGCTTGGGTTGTTACAATTAACTTGACCTATATATTTTATTGTATCCACTCCGAAAAGCTTCATCATTATCTTAGATCTTTTGGATACTTCAAAATCTTTTTCCTTAATCGTGCAAACTACGTTGAATCAAGCTCGGCTTGAAACCCTCGAGGTCTATGTCCTATTCCACAGTTTTAAACCGTAGATGTATCGTGGATGTGTTTAGGATACAAGATCCCGTGGCGATGCGCCATTATATAGTTGACCTATTAAATGTGACTTTAGGCTTCCTAATCTAACTTTGTTGATTTGAATTGTTATCCCCTTTAAGGCTCTTCTATTTATTTTCCATATCTCAGGCACTCTCTAATTATACCAAAATCTCATTATTCTTCGTTGGAAGCTACGCCTCCTTCTGTAAGTAACCATCCACTTAAGCTATACGTTCTAAAGTAATTGTCAATATATGTGTATATATATATGCATGTTTGTTTTTGTACATACGTGTGTGAGCTACCCTGTGGCACATACGTGTGTCACAGTGTGGGCGAGTGGGCCGAGACGAGTGTCTCGGGCGACTTCCTTTGAAATGGGTTTTTGAAGGACAGTACCGGACAGCACGGGTGTGCCGGTATTGCGCCCTAGTCCGCGTGTTGGAGGTTGCTACATAAACTCGCTATCTAGTACGGTATCCATAAATGACTCGGCATGGGCATAGGAGGGCCAATGGCTCGATAGAACCCGGATGGATGGATGTTCGGGAAGTCCCAATGAGATGAAAGACACGTGGGCCCATTCTCGATTGCATGACCGAGCGAGTTATGATGGCCGACGACATCCTGAGACTCGGGATGGCGTCAAGACATATGGACCCTGTCGATGGGGATCGAGATGGCAAGATGAGATGCAACGTTGCGTTGAGAGACCTTGGCCCGAGCAAAGCCAAGGTCGAGCCGAATGACTTGGCTTAGTGTAGAGACAAGTCGGATGTGTCGCAGACGATTGAACATGCATGCGCAGGCGGCGTGTGTGGTTGAACAAGCTTGGATTCTGAATATATTTATATATATATTCGGGTTCTCTCATTTGTTTGTCGATTTTCTGATGATCTATGTATTTATTTTGTCTATCTTCTATCTACTTACTGAACAGGTGATAGCTGCAATGTGTTCAAAAGTTCCATTAATTAGCAATGCAATCATGAAGTCAACCGGCAGCGGTATGAACCGACATTTATTTGCTTCATTCTATGTTTCTGTCTTCTCTCCAGTTTCTCAAATGTTTGGTTTTTCACATGTTGGGAATTCAGGCATGTTTGAATTTGAAATTCATGTGGTCGTGTTTCTGGTTTGAAAGACAGAAACATACAATCTTGTCCCCAGTTAACTGTTAATGTTCTGAAATGTGCAAGATTTCGAGCATTTATTTATGCTTAGGAACGTATCTACGATAGTCGTATTGTGCGTTGACTTTTACGAACACTTTTTATGTAACCGCACAAACCCACGATAGAGTCTTGGTTCATGTCTAATTTGATCTATTTCCTATTTTTTAATCTGTGTCGGATGTTTGTTGCTTCAAGTAGTTTCAACTGACATGAAGACAAACTTATATCATGCAGATTCATTCAACTTATTAGTTAACAATGGTGTGGCTGCTGGTCAAGTTATATTCCATGTAAGTTGTAACACAATCTCTATTGTTGTAACCGTCCAAGCCCACCGCTTGTGAATATTGTCTATTTTGGCCTGTTACGTATTACTATCAGCCTCACGGTTTTAAAACGCACCTACTATGGAGAGGGTCTAATCTTACTCTGACCAGTGTCTCGTACTGTCCGATGACTGGCTCTGATATGCTGGGCCACCAAGGGGGGTGAGTTGTGAGGGCCAACGTCGTTTGAAGAGGGAACGAAGTATCCCTTATAAGGGTGTGGAACCTAACAGACGCGTTTTAAAACCATGAGGCTGACGACGATACATAACAGACTAAAACGGATAATATTTGCTAGTAGTGGCCTTGGGCGGTTACACTTACTCTTTTATATGCCCCTTGTAGTAACATAGGTTTTAGTAATGGTGCATCGGTAAAATCCCATAAACATGTGCATTTAAGCTAAATTCTAGTCGACCAATTTAAGCATAGCTCAATTGAGTGAAGAACTACAACCCTGACCAGTATGTCAGAAGTTCAAATCTTCTCCTAGTTTGTTGAACGTTTTAAGTTTCATCTTACATACAACAAATCTTTGCTGATCTTTGTGTAAGCTTGAAACTATCAGACTCACATTCACATAATTCCACGCAAGGCGAGAGATTGCTTATGGGAATCTGAGGTACGTGTTACCATACCTGTTGATATTGTATTTTGAACGATCGAATCATCGACGCACGAACTATAAACACCGAGTTGATGCAGAGTTTGCAGCGAAGAACGCTGAAATTTGACGAGGAGGCGTCGAGGCTAGCAGAAAGCATACAAGAAATGCTACACAACACCAAAGAGAATGATAGCAGCAAGGTTCAAGAATCAAATCTGAGTGGAAATTAGCAATGTAATTAGGGTGGTGTTGCAATTTGAGCTGTATTATTTTGTGTACCATATTCATGTAATGTCAACTACAGTTTATTCTTTTTGAGTACCACAAAATTTGAATACTTAATAAAATGGAAGGCTTGCTTGCTTGTAAAGTTTGGTTGTTGTTTGACGTGGTATATATGTTCGACCAAGAGGATAGAGATTTGAC ATGGAGGCCCGGAGGCTTGCCATTCTCTGTTCGCATCTCCGTCCAATTAACTCGGGACGTAGTCGAGCAACTCCCTCACATCTTTCCTCTTCGAACTGTGCTTCAGTAGCCAAGAGTGAGCAGCAGCTAATTTATGATCCTCACAAGGGGAGTCTACAAGATGGTTGTGTTTTCTGCAGGATTATACTCGGCGAGGAACCCGCTTTTAAGCTCTATGAAGATGATAGTTGCCTTTGTATATTAGATACAAGACCATTGAGTAATGGGCACTCTCTAATTATACCAAAATCTCATTATTCTTCGTTGGAAGCTACGCCTCCTTCTGTGATAGCTGCAATGTGTTCAAAAGTTCCATTAATTAGCAATGCAATCATGAAGTCAACCGGCAGCGATTCATTCAACTTATTAGTTAACAATGGTGTGGCTGCTGGTCAAGTTATATTCCATACTCACATTCACATAATTCCACGCAAGGCGAGAGATTGCTTATGGGAATCTGAGAGTTTGCAGCGAAGAACGCTGAAATTTGACGAGGAGGCGTCGAGGCTAGCAGAAAGCATACAAGAAATGCTACACAACACCAAAGAGAATGATAGCAGCAAGGTTCAAGAATCAAATCTGAGTGGAAATTAGCAATGTAATTAGGGTGGTGTTGCAATTTGAGCTGTATTATTTTGTGTACCATATTCATGTAATGTCAACTACAGTTTATTCTTTTTGAGTACCACAAAATTTGAATACTTAATAAAATGGAAGGCTTGCTTGCTTGTAAAGTTTGGTTGTTGTTTGACGTGGTATATATGTTCGACCAAGAGGATAGAGATTTGAC ATGGAGGCCCGGAGGCTTGCCATTCTCTGTTCGCATCTCCGTCCAATTAACTCGGGACGTAGTCGAGCAACTCCCTCACATCTTTCCTCTTCGAACTGTGCTTCAGTAGCCAAGAGTGAGCAGCAGCTAATTTATGATCCTCACAAGGGGAGTCTACAAGATGGTTGTGTTTTCTGCAGGATTATACTCGGCGAGGAACCCGCTTTTAAGCTCTATGAAGATGATAGTTGCCTTTGTATATTAGATACAAGACCATTGAGTAATGGGCACTCTCTAATTATACCAAAATCTCATTATTCTTCGTTGGAAGCTACGCCTCCTTCTGTGATAGCTGCAATGTGTTCAAAAGTTCCATTAATTAGCAATGCAATCATGAAGTCAACCGGCAGCGATTCATTCAACTTATTAGTTAACAATGGTGTGGCTGCTGGTCAAGTTATATTCCATACTCACATTCACATAATTCCACGCAAGGCGAGAGATTGCTTATGGGAATCTGAGAGTTTGCAGCGAAGAACGCTGAAATTTGACGAGGAGGCGTCGAGGCTAGCAGAAAGCATACAAGAAATGCTACACAACACCAAAGAGAATGATAGCAGCAAGGTTCAAGAATCAAATCTGAGTGGAAATTAG
BLAST of CmoCh08G003080 vs. Swiss-Prot
Match: HINT3_ARATH (Adenylylsulfatase HINT3 OS=Arabidopsis thaliana GN=HINT3 PE=1 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 3.3e-64 Identity = 127/196 (64.80%), Postives = 149/196 (76.02%), Query Frame = 1
BLAST of CmoCh08G003080 vs. Swiss-Prot
Match: YHI2_MYCTU (Uncharacterized HIT-like protein Rv1262c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1262c PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.3e-20 Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 1
BLAST of CmoCh08G003080 vs. Swiss-Prot
Match: YHI2_MYCTO (Uncharacterized HIT-like protein MT1300 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1300 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.3e-20 Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 1
BLAST of CmoCh08G003080 vs. Swiss-Prot
Match: Y866_METJA (Uncharacterized HIT-like protein MJ0866 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0866 PE=3 SV=2) HSP 1 Score: 92.4 bits (228), Expect = 6.2e-18 Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 1
BLAST of CmoCh08G003080 vs. Swiss-Prot
Match: YHIT_SULSO (Uncharacterized HIT-like protein SSO2163 OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=SSO2163 PE=3 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.2e-18 Identity = 44/142 (30.99%), Postives = 80/142 (56.34%), Query Frame = 1
BLAST of CmoCh08G003080 vs. TrEMBL
Match: A0A0A0K757_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G378430 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 1.9e-90 Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 1
BLAST of CmoCh08G003080 vs. TrEMBL
Match: A0A061DUX2_THECC (Histidine triad (Hit) protein, putative OS=Theobroma cacao GN=TCM_002721 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.6e-68 Identity = 144/208 (69.23%), Postives = 159/208 (76.44%), Query Frame = 1
BLAST of CmoCh08G003080 vs. TrEMBL
Match: M5VKP1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011486mg PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 4.3e-66 Identity = 137/211 (64.93%), Postives = 163/211 (77.25%), Query Frame = 1
BLAST of CmoCh08G003080 vs. TrEMBL
Match: A0A059AWK3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00746 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 3.6e-65 Identity = 138/222 (62.16%), Postives = 164/222 (73.87%), Query Frame = 1
BLAST of CmoCh08G003080 vs. TrEMBL
Match: W9RLR7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015829 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 2.0e-63 Identity = 132/206 (64.08%), Postives = 156/206 (75.73%), Query Frame = 1
BLAST of CmoCh08G003080 vs. TAIR10
Match: AT5G48545.1 (AT5G48545.1 histidine triad nucleotide-binding 3) HSP 1 Score: 246.1 bits (627), Expect = 1.9e-65 Identity = 127/196 (64.80%), Postives = 149/196 (76.02%), Query Frame = 1
BLAST of CmoCh08G003080 vs. TAIR10
Match: AT1G31160.1 (AT1G31160.1 HISTIDINE TRIAD NUCLEOTIDE-BINDING 2) HSP 1 Score: 55.1 bits (131), Expect = 6.2e-08 Identity = 31/101 (30.69%), Postives = 51/101 (50.50%), Query Frame = 1
BLAST of CmoCh08G003080 vs. TAIR10
Match: AT3G56490.1 (AT3G56490.1 HIS triad family protein 3) HSP 1 Score: 50.1 bits (118), Expect = 2.0e-06 Identity = 37/144 (25.69%), Postives = 63/144 (43.75%), Query Frame = 1
BLAST of CmoCh08G003080 vs. TAIR10
Match: AT5G58240.1 (AT5G58240.1 FRAGILE HISTIDINE TRIAD) HSP 1 Score: 48.1 bits (113), Expect = 7.5e-06 Identity = 39/137 (28.47%), Postives = 60/137 (43.80%), Query Frame = 1
BLAST of CmoCh08G003080 vs. NCBI nr
Match: gi|659100818|ref|XP_008451282.1| (PREDICTED: bis(5'-adenosyl)-triphosphatase isoform X2 [Cucumis melo]) HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90 Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 1
BLAST of CmoCh08G003080 vs. NCBI nr
Match: gi|659100822|ref|XP_008451285.1| (PREDICTED: hit family protein 1 isoform X4 [Cucumis melo]) HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90 Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 1
BLAST of CmoCh08G003080 vs. NCBI nr
Match: gi|659100820|ref|XP_008451283.1| (PREDICTED: bis(5'-adenosyl)-triphosphatase isoform X3 [Cucumis melo]) HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90 Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 1
BLAST of CmoCh08G003080 vs. NCBI nr
Match: gi|659100816|ref|XP_008451281.1| (PREDICTED: uncharacterized protein LOC103492627 isoform X1 [Cucumis melo]) HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90 Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 1
BLAST of CmoCh08G003080 vs. NCBI nr
Match: gi|449458428|ref|XP_004146949.1| (PREDICTED: hit family protein 1 [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 2.7e-90 Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |